CmoCh04G006010 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGCGTTGAACAGCCGGGTAAGTTATTCAGATTGTTATCTTACTTCATTTGGATTTTCATTTGCATTGCTCTCCGATGGATTAAAGGAGTTGTGGATTTCTGAAGTGATTTTCAAAACGTGAATGGAAGTGCATTAGAACAGAGCGATTGAGATATATGAAATACGCCAGTGATTTTGAGCTCTACTGAAATGTCAAAAAAAGTTACGGTCTATATCCATGTCTGAATTTAGGGTTTGTGTTTGTGTCAAATTTTATGGAGTGATATTTTGTGAGTAGATAAAGATTAGATGGAAGATTGCAAGAATGGCACAAGAATATCAAACTCATGATAATGGTGGTGGTGATGGTAGTTTAGGGTTTGGTTCCAATAGGAAGTCAAAACAAAGGAGAGCTCCTCAAAGAGGGCTAGGTGTTGCACAACTTGAAAAGATCAGGCTAGAAGAACAGCAAAAGAAAAATGCTACTGCAATTTTTTCACCCTCATCTTCTTTATCACCTGCCAAGATCTCCTCTAAGCTATCTGTATCAGCTCCAAATTTGCACCCCATAAAGCAATCTTCCTGTTCTGTTCCACTTGCCTCTCTATCTCCATCCAATTTTGTTTTCAAGTCACCTTTGCCTAGTATCAATATTGATGATACAAGCATGAACAGTAGTACTGCACTGATCCAGTTGAATAATGGTGGTTTCGAGACGACGGATATGCCTGTACTTGGACAAGGAGAGGTCCCTAAAACATGGAATCCCCTAGAATTCAATCTTCAAAAGGATAATTGTATCTCCGATTTCAACTTTGGATTTCGATCGAATTTCGTTTTGACCAATGAAGCCAACATTGATTGGCCTTCCCAAGGATTGGTGCAAAAAGAACAGCTACATCAGCTATCTTCCTCTGCAGGGGTAATTATCCACTTTTGGTTTGTTTGTCTTCCAGATTTCCATTTAAATATAAAGTAGGACTTCAAAAACCATTATATGAAGGATATTTATATGAAATGTACAGGTGGATGTGTCGTCGTCATCGTCCCTGCTAAACTTTCTTACAGAGCCCCCTTCAAACCAAAGCTATTGTGGCAACTACACTGCAGTGTGGCCAGAGGTACTAAGGTTCATTCAACTTAAACATGTCAATGCCATAGCACTAACAACTTGTAAGAAGCTTTGCTATTGGGATAAAATTCTGTAGATTTTAGTCTTCAACTAGTCCCTCCTGATTGAACTGTGGAAATTTTAGCTTCTGTAGTTCACTTATCTTTGAATAGTGCATGTTAGGCTAGCAGATACCTTTTGCATTTCAAATGAGAATGCATGGACTCGTCATAAAAGACACGATGAGTCGAAGACTAACTTAAAATATGGTAACGAACAGTCACGAGTTGAACATAAAAGCTATAGGTTTGGGTCATATTGAATTTCCGATATGTTCAAAATCAAAAAACCGAACAAGCGAATGCTATGATCTTTAGTGAATATATTCATGTGTGGTTGTAGATGTTCGGCATGAAGAGACCATATGCCTTGTCTATGGACATCCCTGCAAGCCCTACTTTCAACAGCAGACCTCCTATGGCTGCTCCTATGAGATCAGATGAATCCGCTTCTTGTAGTAACGTTGGCTTCTATAGTTATCCGTTTATCGGGTTTGTCATATGTTCATCTTGTTTTCCTTTCAACACTTTCAATTATCAAATGTGTTTTAAGTGAGTCTAAATCGTCTGTCTCTTACTATTCAGAGAAGGTCCATCTTGTTCGTCTTCATCCTCGGAACCAAATTCAAGGAAAAAGTTGAAAGGAAATACTTTTAGAGGAGATTTACTCACACTAGCCACTCCAACAACTACATGGATATGCCAAAGCTCAAAACTCAAGCACCTTTCAGCTCATGCTGTGGATAGTAACCATGAGTTTGCAGATCTCATATCACTACCTCGTCGAGTAAGAAAAACAGCAAAAATGATATCCATTTCGAGTTGTTAGTGCACCGAGGTCGTGTTTCCTTCTGCATTCTGATAATTTTTGCTGTTTTCGTCGATTTGTTGAAGGGAAGCGTGGAGATCCCAACTTATCCCCATCCAAAACCGAGTTGGTCCAATCGACTTCAGCCATACTACCGCTTTTTCCCTCCAGAAATGGCACAAAGTGGCCAGGCATCCCCCAAAACTTCGGGCAGATTCAATATTGAAGATGGAAGTGTTGATCTTAATCTGAAATTATAAACACCACAGTTTGTACCTGTTGCTTTTGGAACCTTTTTGCAGAGTAGTCCATATGTTTGAGATCATAAGAATGGTATGTTCAAGTTTCTTTCCTTACTCAGATATACTTTATGTTTTAGCTAAATCAGCAAGCATGCA CTTGCGTTGAACAGCCGGGTAAGTTATTCAGATTGTTATCTTACTTCATTTGGATTTTCATTTGCATTGCTCTCCGATGGATTAAAGGAGTTGTGGATTTCTGAAGTGATTTTCAAAACGTGAATGGAAGTGCATTAGAACAGAGCGATTGAGATATATGAAATACGCCAGTGATTTTGAGCTCTACTGAAATGTCAAAAAAAGTTACGGTCTATATCCATGTCTGAATTTAGGGTTTGTGTTTGTGTCAAATTTTATGGAGTGATATTTTGTGAGTAGATAAAGATTAGATGGAAGATTGCAAGAATGGCACAAGAATATCAAACTCATGATAATGGTGGTGGTGATGGTAGTTTAGGGTTTGGTTCCAATAGGAAGTCAAAACAAAGGAGAGCTCCTCAAAGAGGGCTAGGTGTTGCACAACTTGAAAAGATCAGGCTAGAAGAACAGCAAAAGAAAAATGCTACTGCAATTTTTTCACCCTCATCTTCTTTATCACCTGCCAAGATCTCCTCTAAGCTATCTGTATCAGCTCCAAATTTGCACCCCATAAAGCAATCTTCCTGTTCTGTTCCACTTGCCTCTCTATCTCCATCCAATTTTGTTTTCAAGTCACCTTTGCCTAGTATCAATATTGATGATACAAGCATGAACAGTAGTACTGCACTGATCCAGTTGAATAATGGTGGTTTCGAGACGACGGATATGCCTGTACTTGGACAAGGAGAGGTCCCTAAAACATGGAATCCCCTAGAATTCAATCTTCAAAAGGATAATTGTATCTCCGATTTCAACTTTGGATTTCGATCGAATTTCGTTTTGACCAATGAAGCCAACATTGATTGGCCTTCCCAAGGATTGGTGCAAAAAGAACAGCTACATCAGCTATCTTCCTCTGCAGGGGTGGATGTGTCGTCGTCATCGTCCCTGCTAAACTTTCTTACAGAGCCCCCTTCAAACCAAAGCTATTGTGGCAACTACACTGCAGTGTGGCCAGAGATGTTCGGCATGAAGAGACCATATGCCTTGTCTATGGACATCCCTGCAAGCCCTACTTTCAACAGCAGACCTCCTATGGCTGCTCCTATGAGATCAGATGAATCCGCTTCTTGTAGTAACGTTGGCTTCTATAGTTATCCGTTTATCGGAGAAGGTCCATCTTGTTCGTCTTCATCCTCGGAACCAAATTCAAGGAAAAAGTTGAAAGGAAATACTTTTAGAGGAGATTTACTCACACTAGCCACTCCAACAACTACATGGATATGCCAAAGCTCAAAACTCAAGCACCTTTCAGCTCATGCTGTGGATAGTAACCATGAGTTTGCAGATCTCATATCACTACCTCGTCGAGGAAGCGTGGAGATCCCAACTTATCCCCATCCAAAACCGAGTTGGTCCAATCGACTTCAGCCATACTACCGCTTTTTCCCTCCAGAAATGGCACAAAGTGGCCAGGCATCCCCCAAAACTTCGGGCAGATTCAATATTGAAGATGGAAGTGTTGATCTTAATCTGAAATTATAAACACCACAGTTTGTACCTGTTGCTTTTGGAACCTTTTTGCAGAGTAGTCCATATGTTTGAGATCATAAGAATGGTATGTTCAAGTTTCTTTCCTTACTCAGATATACTTTATGTTTTAGCTAAATCAGCAAGCATGCA ATGGCACAAGAATATCAAACTCATGATAATGGTGGTGGTGATGGTAGTTTAGGGTTTGGTTCCAATAGGAAGTCAAAACAAAGGAGAGCTCCTCAAAGAGGGCTAGGTGTTGCACAACTTGAAAAGATCAGGCTAGAAGAACAGCAAAAGAAAAATGCTACTGCAATTTTTTCACCCTCATCTTCTTTATCACCTGCCAAGATCTCCTCTAAGCTATCTGTATCAGCTCCAAATTTGCACCCCATAAAGCAATCTTCCTGTTCTGTTCCACTTGCCTCTCTATCTCCATCCAATTTTGTTTTCAAGTCACCTTTGCCTAGTATCAATATTGATGATACAAGCATGAACAGTAGTACTGCACTGATCCAGTTGAATAATGGTGGTTTCGAGACGACGGATATGCCTGTACTTGGACAAGGAGAGGTCCCTAAAACATGGAATCCCCTAGAATTCAATCTTCAAAAGGATAATTGTATCTCCGATTTCAACTTTGGATTTCGATCGAATTTCGTTTTGACCAATGAAGCCAACATTGATTGGCCTTCCCAAGGATTGGTGCAAAAAGAACAGCTACATCAGCTATCTTCCTCTGCAGGGGTGGATGTGTCGTCGTCATCGTCCCTGCTAAACTTTCTTACAGAGCCCCCTTCAAACCAAAGCTATTGTGGCAACTACACTGCAGTGTGGCCAGAGATGTTCGGCATGAAGAGACCATATGCCTTGTCTATGGACATCCCTGCAAGCCCTACTTTCAACAGCAGACCTCCTATGGCTGCTCCTATGAGATCAGATGAATCCGCTTCTTGTAGTAACGTTGGCTTCTATAGTTATCCGTTTATCGGAGAAGGTCCATCTTGTTCGTCTTCATCCTCGGAACCAAATTCAAGGAAAAAGTTGAAAGGAAATACTTTTAGAGGAGATTTACTCACACTAGCCACTCCAACAACTACATGGATATGCCAAAGCTCAAAACTCAAGCACCTTTCAGCTCATGCTGTGGATAGTAACCATGAGTTTGCAGATCTCATATCACTACCTCGTCGAGGAAGCGTGGAGATCCCAACTTATCCCCATCCAAAACCGAGTTGGTCCAATCGACTTCAGCCATACTACCGCTTTTTCCCTCCAGAAATGGCACAAAGTGGCCAGGCATCCCCCAAAACTTCGGGCAGATTCAATATTGAAGATGGAAGTGTTGATCTTAATCTGAAATTATAA
BLAST of CmoCh04G006010 vs. TrEMBL
Match: A0A0A0L0E8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G088740 PE=4 SV=1) HSP 1 Score: 576.2 bits (1484), Expect = 3.0e-161 Identity = 305/419 (72.79%), Postives = 340/419 (81.15%), Query Frame = 1
BLAST of CmoCh04G006010 vs. TrEMBL
Match: M5WHS4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005691mg PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 6.1e-61 Identity = 192/449 (42.76%), Postives = 242/449 (53.90%), Query Frame = 1
BLAST of CmoCh04G006010 vs. TrEMBL
Match: A0A061F777_THECC (Actin cytoskeleton-regulatory complex protein pan1, putative isoform 1 OS=Theobroma cacao GN=TCM_031704 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56 Identity = 184/449 (40.98%), Postives = 244/449 (54.34%), Query Frame = 1
BLAST of CmoCh04G006010 vs. TrEMBL
Match: F6H1Y3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01700 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.7e-55 Identity = 185/466 (39.70%), Postives = 237/466 (50.86%), Query Frame = 1
BLAST of CmoCh04G006010 vs. TrEMBL
Match: A0A067KMS6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09838 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53 Identity = 175/442 (39.59%), Postives = 232/442 (52.49%), Query Frame = 1
BLAST of CmoCh04G006010 vs. NCBI nr
Match: gi|778691624|ref|XP_011653313.1| (PREDICTED: uncharacterized protein LOC101210166 [Cucumis sativus]) HSP 1 Score: 576.2 bits (1484), Expect = 4.4e-161 Identity = 305/419 (72.79%), Postives = 340/419 (81.15%), Query Frame = 1
BLAST of CmoCh04G006010 vs. NCBI nr
Match: gi|659101618|ref|XP_008451702.1| (PREDICTED: uncharacterized protein LOC103492918 [Cucumis melo]) HSP 1 Score: 573.2 bits (1476), Expect = 3.7e-160 Identity = 306/421 (72.68%), Postives = 338/421 (80.29%), Query Frame = 1
BLAST of CmoCh04G006010 vs. NCBI nr
Match: gi|1009161951|ref|XP_015899172.1| (PREDICTED: uncharacterized protein LOC107432536 [Ziziphus jujuba]) HSP 1 Score: 254.6 bits (649), Expect = 2.9e-64 Identity = 194/437 (44.39%), Postives = 242/437 (55.38%), Query Frame = 1
BLAST of CmoCh04G006010 vs. NCBI nr
Match: gi|731432040|ref|XP_010644146.1| (PREDICTED: uncharacterized protein LOC104877499 [Vitis vinifera]) HSP 1 Score: 245.4 bits (625), Expect = 1.8e-61 Identity = 185/437 (42.33%), Postives = 238/437 (54.46%), Query Frame = 1
BLAST of CmoCh04G006010 vs. NCBI nr
Match: gi|595863656|ref|XP_007211627.1| (hypothetical protein PRUPE_ppa005691mg [Prunus persica]) HSP 1 Score: 243.0 bits (619), Expect = 8.7e-61 Identity = 192/449 (42.76%), Postives = 242/449 (53.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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