CmoCh04G005590 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAATGCAGCCCCTGGCAGCACTGCAATCCTCTCCACATCTTCCCCTTCTTCCACAACGTCCACACACATTGCCAGATCCTTCACCATATACTCAGCATACCCACCAGGCCTGAAGTCCCTCTCTATCATCCTCCCCCCGAACAACTCCATTGCCATCGACCCTCCTGCCCCGCCCCTCACAGCTTCCACAAACTGCTTCACATCCAACCCCGCCTGCTCAGCGAACACCAGCCCTTCACTCACCCCTATCATGTTTCCCACAAGCGTTATCTGGTTCGCTATCTTGCAGCTCTGCCCACACCCTGCTTCACCCACGTATGTCACTTTCCCCAATGCTTCAAACAGAGGTGATAACCACTTCACTACCTCTGCATCGCCACCCCCAAAAATGGATAGCTTCCCGTCCCTAGCGCCAATGTCGCCTCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATTAGTAAACAAGCTTGAACTTCTTAGTTCAGGATGTTGGGAGGGAATCCCACATTAGAAATACATCTTGGTTCATACAAAAGACTTTTGAGAAGCCCAAACCAAATCCATCTAAACTTATGCTCAAACTAGACAATATGAGTTGATTTAATCTAGTAATTTAGTGAAAATTAACAAGACCTTTTGCTCGAGCGGCAGCGAAGATCTCGCGGGCAAGAGCGGGGTGGCTGCTGGTGGTGTCAACGATGACCCCACCAGGATTTAGTCCTTGTAGGAGCCCATTCTTCTGTAAGACATTTTGTCGAACATCTGATGGGTTTCCCACCATTGTGAAAACAACGTCGCAAGTCTGAGCTAATTCGGAAGGGGAATTGACGAGGGAAGCGCCTTTGGACTGTAAATCAAGAGCCTTGGAAGGGGAACGAGCGTAGATTGTGAGGGAGTATCCGGCGGCGAGGAGACGAGTGGCCATGGCGGCGCCCATCACACCTATGCCGATCCATCCAACGCGAGTTTTAGAAGGAGAGATGGGGATTGGGTAAGGGGTTTCCATGGTGGATTAAGGATTTATCAAAAGCAATTTACAGATGATCAACAGACACCGCCGTGGATCTTGGTTTATTTAGAGTCTAAGATGATAACTGAGCCAACACGAATATATGCTAAAATACCTTTTAACTTTTCAAATATCATTAATATCCTCCATTTTTTTTTTTTATCTTGTACTAAGCTTAAAAAAAAATATTCTTAAAATTTCAAAATAACATTAAAATTCTTAATCTTTATGAAAAAAAAAAAAAATTACCATCAATGTATGAACACAAACTTATATCCACGTCTCATAAATTATTTTCATTTAGAACAAAAATAAATAAATAAATAAATAAAATCTAAAAGTTAATGGTAAGGTTATTTTAAACTTTTTTTTTTTTTAAGATCTAAATGTATTTTTAAAGTTTTGTTAGAAAAAAGTTGGAATATTTATAAAAGTTACCGGATATTTTGAAATTTCAAAAGTATTAACGATGTTCATTTAAACTAAATGTAAATTTATTAACACATAAAATGTAATCATTAGCATAACCAAACCTATCAATTATCAAAATTCATTTCCACTCCAAGACAAAAAAGAATATATGAATGAACTAAAATCACATAAAAATACTTCAAAATTTAAAATTATTACCTATATTAATAAAGTGTATCTTTATTTTGGATAACTCTATCATAAAAACTCTATTGTTGGTACGTGGGTCAAGTCGTGTTAGTCTATAAGGTCACTATGTGTTGGTCTGTGGGAATTTTCTTCACTCTTAGGTGGATAACGTGGTCGTGTCACAAGAAAAGTAGAAAAATATCGGAACCATCAAATATTAAATTCAAACTCTGAATCCTAATGGAGTATTACCATTTTTTGAACAAAAATGGATTAGGAACTTACTCCAAAACAACTTAAAATATTTTTCTTGTAAAGGATAATTTTAAGAAACAATAGCATATTTTATTTTTTAAAACATAAACTATCAGTACAAGCCAGACAGAGAATTGGCTTCCAATCCCAAGTGCACAAACAAGCAATAAACAAACAAGTTTCTTACAGATTCACTTACTTGCCATTAAGCCTCTGAACAACAGAGATTAGCCCTTGAGTGCCAAACTTTCCATCTCCATTGGCCACCATTGCAGAGAACAATTGCTTGGCCAGTGCAGCCCCTGGCAACACTACAAGCCTCTCCACATCTTCCCCTTCTTCCACAACATCCACGCCCATTCCCAAATCCTTCACCATATACTCAGCAAACCCACCAGGCCTAAAGTCCCTCTCTATCATCCTCTCACCAAACAGCTCCATTGCCATTGACCCTGCAGCCCCACCCCTTAAAGCTTCCACAAACTGCTTCACATCCAACCCCGCCCGCTCAGCGAACACCAGCCCTTCACCCAGCCCCATCAGGTTTCCCCCAATCGCTATCTGGTTCGCTATCTTGCAGCTCTGTCCACACCCTGCTTCACCCACGTATGCCACTTTCCCCAATGCTTCAAACAGAGGTGACAACCACTTCACTACCCCTGCATCACCACCCCCAAAAATGGCCAACTTCCCATCTCTAGCGCCAATGTCGCCCCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATGAGCAAATAA ATGGCCAATGCAGCCCCTGGCAGCACTGCAATCCTCTCCACATCTTCCCCTTCTTCCACAACGTCCACACACATTGCCAGATCCTTCACCATATACTCAGCATACCCACCAGGCCTGAAGTCCCTCTCTATCATCCTCCCCCCGAACAACTCCATTGCCATCGACCCTCCTGCCCCGCCCCTCACAGCTTCCACAAACTGCTTCACATCCAACCCCGCCTGCTCAGCGAACACCAGCCCTTCACTCACCCCTATCATGTTTCCCACAAGCGTTATCTGGTTCGCTATCTTGCAGCTCTGCCCACACCCTGCTTCACCCACGTATGTCACTTTCCCCAATGCTTCAAACAGAGGTGATAACCACTTCACTACCTCTGCATCGCCACCCCCAAAAATGGATAGCTTCCCGTCCCTAGCGCCAATGTCGCCTCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATTAATTGTGAGGGAGTATCCGGCGGCGAGGAGACGAGTGGCCATGGCGGCGCCCATCACACCTATGCCGATCCATCCAACGCGAAGAACAATTGCTTGGCCAGTGCAGCCCCTGGCAACACTACAAGCCTCTCCACATCTTCCCCTTCTTCCACAACATCCACGCCCATTCCCAAATCCTTCACCATATACTCAGCAAACCCACCAGGCCTAAAGTCCCTCTCTATCATCCTCTCACCAAACAGCTCCATTGCCATTGACCCTGCAGCCCCACCCCTTAAAGCTTCCACAAACTGCTTCACATCCAACCCCGCCCGCTCAGCGAACACCAGCCCTTCACCCAGCCCCATCAGGTTTCCCCCAATCGCTATCTGGTTCGCTATCTTGCAGCTCTGTCCACACCCTGCTTCACCCACGTATGCCACTTTCCCCAATGCTTCAAACAGAGGTGACAACCACTTCACTACCCCTGCATCACCACCCCCAAAAATGGCCAACTTCCCATCTCTAGCGCCAATGTCGCCCCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATGAGCAAATAA ATGGCCAATGCAGCCCCTGGCAGCACTGCAATCCTCTCCACATCTTCCCCTTCTTCCACAACGTCCACACACATTGCCAGATCCTTCACCATATACTCAGCATACCCACCAGGCCTGAAGTCCCTCTCTATCATCCTCCCCCCGAACAACTCCATTGCCATCGACCCTCCTGCCCCGCCCCTCACAGCTTCCACAAACTGCTTCACATCCAACCCCGCCTGCTCAGCGAACACCAGCCCTTCACTCACCCCTATCATGTTTCCCACAAGCGTTATCTGGTTCGCTATCTTGCAGCTCTGCCCACACCCTGCTTCACCCACGTATGTCACTTTCCCCAATGCTTCAAACAGAGGTGATAACCACTTCACTACCTCTGCATCGCCACCCCCAAAAATGGATAGCTTCCCGTCCCTAGCGCCAATGTCGCCTCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATTAATTGTGAGGGAGTATCCGGCGGCGAGGAGACGAGTGGCCATGGCGGCGCCCATCACACCTATGCCGATCCATCCAACGCGAAGAACAATTGCTTGGCCAGTGCAGCCCCTGGCAACACTACAAGCCTCTCCACATCTTCCCCTTCTTCCACAACATCCACGCCCATTCCCAAATCCTTCACCATATACTCAGCAAACCCACCAGGCCTAAAGTCCCTCTCTATCATCCTCTCACCAAACAGCTCCATTGCCATTGACCCTGCAGCCCCACCCCTTAAAGCTTCCACAAACTGCTTCACATCCAACCCCGCCCGCTCAGCGAACACCAGCCCTTCACCCAGCCCCATCAGGTTTCCCCCAATCGCTATCTGGTTCGCTATCTTGCAGCTCTGTCCACACCCTGCTTCACCCACGTATGCCACTTTCCCCAATGCTTCAAACAGAGGTGACAACCACTTCACTACCCCTGCATCACCACCCCCAAAAATGGCCAACTTCCCATCTCTAGCGCCAATGTCGCCCCCTGACACGGGCGCATCCACAGCCCAGCAACCTGCCAAGAATATGAGCAAATAA
BLAST of CmoCh04G005590 vs. TrEMBL
Match: A0A0A9GSN2_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 3.0e-24 Identity = 78/156 (50.00%), Postives = 92/156 (58.97%), Query Frame = 1
BLAST of CmoCh04G005590 vs. TrEMBL
Match: A0A0A9EWT7_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 6.3e-22 Identity = 75/156 (48.08%), Postives = 90/156 (57.69%), Query Frame = 1
BLAST of CmoCh04G005590 vs. TrEMBL
Match: A0A0A9IU47_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.2e-19 Identity = 62/127 (48.82%), Postives = 73/127 (57.48%), Query Frame = 1
BLAST of CmoCh04G005590 vs. TrEMBL
Match: C7IY07_ORYSJ (Os01g0742350 protein OS=Oryza sativa subsp. japonica GN=Os01g0742350 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14 Identity = 56/113 (49.56%), Postives = 64/113 (56.64%), Query Frame = 1
BLAST of CmoCh04G005590 vs. TrEMBL
Match: A0A0A9JAG2_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.3e-14 Identity = 55/116 (47.41%), Postives = 64/116 (55.17%), Query Frame = 1
BLAST of CmoCh04G005590 vs. NCBI nr
Match: gi|255673675|dbj|BAH91293.1| (Os01g0742350 [Oryza sativa Japonica Group]) HSP 1 Score: 88.6 bits (218), Expect = 2.4e-14 Identity = 56/113 (49.56%), Postives = 64/113 (56.64%), Query Frame = 1
BLAST of CmoCh04G005590 vs. NCBI nr
Match: gi|983579322|ref|WP_060729488.1| (hypothetical protein [Streptomyces albus]) HSP 1 Score: 63.9 bits (154), Expect = 6.3e-07 Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 1
BLAST of CmoCh04G005590 vs. NCBI nr
Match: gi|727242671|ref|WP_033702623.1| (hypothetical protein [Pseudomonas sp. WCS358]) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 45/128 (35.16%), Postives = 58/128 (45.31%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |