CmoCh04G005380 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACCGCGAATCCGCCATTACGGCTCTTCCTCATCCACGTGCTACCCATATCTCACGATCGGATTTCGATTGTCCTAAAAATTCAATCCTCCTCCTTCACCTCAACCGTCCCATTCAATTGAAATCGCCGTCTCTGTGCGTACTGTGTACCGGTTCCAAATTCTAAGCCGCGATGTTGAGCGGCGGTGTCGGCGGTGGAAGCGTTTACTGGGGCACGAGGAACGAGCCCAGGATTTGTAGAGGGGTTGTCGTTCTCTTCGCTTGGGTTTCGATTCAGCATCGCCACTTGGATAAGTTCGTCCAGCTTTACGCCTCGCTTGGATGGAATTCCCTTGTTTGTTATGCTGATTTTCTCAATATGTGAGTTCTTCTTTCTTGTTCTTCGTTAATACTCTTCATCGTATGAGGATTTGGGTATTAGGGTCATGGATATTTTAGTCTGTCTTCTTCATCTGGGTTCTTCGGTTCTTGAATTACGAGTTTTCCCATCTAGTTATGAACAGAATTTGAGGGGTTTTCGTTTTCTGTGTTGAAATTTGGTGTTTGTTTGGGAAAGAATTGGACCTAACCTGAAATTCCCATTTCATTTGGATTTGTTCTTAAATGGTTTATGTTTAACCAATTGTTCTGTTCTTACTGACCGTAATACGTTCAGATTTGATCCTGAAAGAGCTACATCACTGGCATTTCTTGTTCTTAATGAGCTCGTTGAGGTCAGTGGCAGGCATTTCTCTCTTATTTTGTATGGCTTTTCATTCGATGAATTTCTCAATGGCTACGATTTTGTAACGATATGGTTTAAATTATCTCTACAGGAGCTAAGAATGAAGCTGCGTCCTGTAGTTTTTGTAGGTCTAAGTGGTGCATCAAAGGCTTGTATGTGCAGAGTTTTGCAGGTGACTTAGTTCACTTACAGAGAATTCTCCATCTAATGCTTAAATTTTCCATTGAATATGTAACTTTGATGCAACTGCTACCGTGTTAATGAATGAATTGCTGCATAAATTGCAGATCATTGAGGGAAGATGTGGCAGTCCACTTTACATGGTTAGTGATTTATATTCTTTAAGGTTCTCTTTTAAACAATGCTGCATTGTGTTATTAATTCGGTTTCAAATGATATTTTCGTCGCCTTCTTTTTACTGTGAAGGCGGAATGTCAAATGATCAGAGCTTGTGTTTCTGGGCACATCTATGATTCCAGTCCCATAGAGCTTATAAGTGACTTGGGCGCTCGATTTGCCATACATCCTGCTATTCGAAAAGTGCCCGGATCGTCACAACTCATCTCCTGGCTTGCTAAAGGCGTCTCTTCTGGTCTTGATGCTCTATATCTTACTAGATTTGATTCACAGCGCGATGAGTATTGGCGAACACTGTGTTCATCTGTTGTAAGCTTCCTAATTTAGTTTTTAGCTTCCTGAACTTTGTTTCACATTCTGAAGTTAATAAGTTTTCTTGCTTTTCTTAGAATATTGGTGCCCCATTTCTCATTATGTGCTCTGAAAAGGACGATCGTGCTCCGTATAAAGTTATCTGTGATTTCACCAAGAGTATTCAAGAATTAGGGGGTGATGTTCAGTTGGTAAAATTCAAAGACTCCCCACACTTAGGTTTGTCTCAAACTTAATATTTACTTTGTAGTACTTTCATTGTTCTTTTAAGTTCTCTTGATAACTGTGAGATCTTACATCGGTTGGAGAGGAGAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGCAAACGCATTTTAAAACCTTGAGAGGAAGCCTTTGAAGGGAAAGCCCAAAGAGGTCAGGTTTAAGCTATTACAAATGGTATCAGAGCCAGTCACTAGGGGGGGATACTGGGGCCCCAAGAGGGGTGGATTGTGAGATCCTACATTGGTTGGAGAGGAGAACGAAGCATTTCTTATAAGGGTGGTGTGGAAACTTCTCCTTAGCAGACGCGTTTTAAAACCTTGAGGGGAAGCCCGTGAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTGTAAGAGTCCGTCATCGGGTGGTGTGCCAAAGAGGATGCTGGACTCCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTGGAAGATGAGATCGAAACATTCCTTATAAGGATGTGGAAACCTCTCCGTAGCAGACGCGTTTTAAAATATTGAGGGAAAGCCCTTGAAGGAAAAGCTCAAAGAGGATAACATCTACTATAAGTGGGTTTGGGCTGTTACAATAACCGAAGAACTTGCCTGTTTTATATGATTGGTCGTGCTTTTTCCTTATTAGCCAATAGAAATTTGTAGTTTGATGTTTAATTTCCTTTGTAAATCTCGAGTTCAACGTGCATAAGCAAGATTTGAATGAGAGATTCTAGCAGCTTGTCTGATGTGATATCTATTTCATGTCAGGTCATTACAAAAATTACCCAGCTCAATATAGAGCTGCTGTGACCATATTTCTTGAGAAGGCATCATCAGCTTACTCCCACAAAATCCCACAATTTAAAGGAGAAAGAAGAGGAATGGAAGGCGATGGAATGCCTGAATTGATATGTGACCTTCAGAATGCAGCAGTTAATTCAAACCAGAGTTTTCGAAGAGTCGCAGTCGGGCCTAGTGATCACTTCTTCTTGCCAAGCTCAGCAGATTCCCAGGACGGTCGGGAGCATCATCCTCCCATGCCTGATCAGAAAGAAAGAATATCTCCACTTTCAAGCCCCCAAGGAATCAGTGCACACAGCGTACTCGGCCAGTTCCTCTTCGACGTTTGTGTGCCCAAAAATGTTGAAGGTTGGGACATCAAGTTCCACGGCTCTCTGAACGGGCAACCACTTGCTTCAGCTCGCAGGCACTCTCCCTTCCCCGGTACAAAGCTTATCCGTCGCTCTAGACTGTGAAAAACTGAGGTTTTAGCTGTGTGAGTTTATTATCATCTAACCTATAGCTACCACATCTAGTTCAAATACTAGCCAGAGAATCCCTCCCTTATGGTAGTATTAGCAATATTAGGAGGTTGTACCTCTGTGGGGGACGAAAGGGTGGCTCAGCGTCGCACTGGTAAAATTGTACGTATGAATCACACAGAGGTCTTGCAGTATATGCAAAGACGTAGAAGTTTCAGACTGCTCTATGGAGCGATAGGTTGCGACGACAGGCTCGGAAATAGGTTAGAGAAGTGTTGTATGACGATGACGACGACGACGATACACAGTAGCAGGGAGTTTTTTGTTGATAGAGTTTAGTGTAGAGAAGGAAGTTTGAATAATGTTGACAGAACTGTTAGTTGGAAGTTTGATTAGCAATTATGATCGCACATATATTCATTTTAACGATACAAGACAAGTTTTGGAGTGG TCCACCGCGAATCCGCCATTACGGCTCTTCCTCATCCACGTGCTACCCATATCTCACGATCGGATTTCGATTGTCCTAAAAATTCAATCCTCCTCCTTCACCTCAACCGTCCCATTCAATTGAAATCGCCGTCTCTGTGCGTACTGTGTACCGGTTCCAAATTCTAAGCCGCGATGTTGAGCGGCGGTGTCGGCGGTGGAAGCGTTTACTGGGGCACGAGGAACGAGCCCAGGATTTGTAGAGGGGTTGTCGTTCTCTTCGCTTGGGTTTCGATTCAGCATCGCCACTTGGATAAGTTCGTCCAGCTTTACGCCTCGCTTGGATGGAATTCCCTTGTTTGTTATGCTGATTTTCTCAATATATTTGATCCTGAAAGAGCTACATCACTGGCATTTCTTGTTCTTAATGAGCTCGTTGAGGAGCTAAGAATGAAGCTGCGTCCTGTAGTTTTTGTAGGTCTAAGTGGTGCATCAAAGGCTTGTATGTGCAGAGTTTTGCAGATCATTGAGGGAAGATGTGGCAGTCCACTTTACATGGCGGAATGTCAAATGATCAGAGCTTGTGTTTCTGGGCACATCTATGATTCCAGTCCCATAGAGCTTATAAGTGACTTGGGCGCTCGATTTGCCATACATCCTGCTATTCGAAAAGTGCCCGGATCGTCACAACTCATCTCCTGGCTTGCTAAAGGCGTCTCTTCTGGTCTTGATGCTCTATATCTTACTAGATTTGATTCACAGCGCGATGAGTATTGGCGAACACTGTGTTCATCTGTTAATATTGGTGCCCCATTTCTCATTATGTGCTCTGAAAAGGACGATCGTGCTCCGTATAAAGTTATCTGTGATTTCACCAAGAGTATTCAAGAATTAGGGGGTGATGTTCAGTTGGTAAAATTCAAAGACTCCCCACACTTAGGTCATTACAAAAATTACCCAGCTCAATATAGAGCTGCTGTGACCATATTTCTTGAGAAGGCATCATCAGCTTACTCCCACAAAATCCCACAATTTAAAGGAGAAAGAAGAGGAATGGAAGGCGATGGAATGCCTGAATTGATATGTGACCTTCAGAATGCAGCAGTTAATTCAAACCAGAGTTTTCGAAGAGTCGCAGTCGGGCCTAGTGATCACTTCTTCTTGCCAAGCTCAGCAGATTCCCAGGACGGTCGGGAGCATCATCCTCCCATGCCTGATCAGAAAGAAAGAATATCTCCACTTTCAAGCCCCCAAGGAATCAGTGCACACAGCGTACTCGGCCAGTTCCTCTTCGACGTTTGTGTGCCCAAAAATGTTGAAGGTTGGGACATCAAGTTCCACGGCTCTCTGAACGGGCAACCACTTGCTTCAGCTCGCAGGCACTCTCCCTTCCCCGGTACAAAGCTTATCCGTCGCTCTAGACTGTGAAAAACTGAGGTTTTAGCTGTGTGAGTTTATTATCATCTAACCTATAGCTACCACATCTAGTTCAAATACTAGCCAGAGAATCCCTCCCTTATGGTAGTATTAGCAATATTAGGAGGTTGTACCTCTGTGGGGGACGAAAGGGTGGCTCAGCGTCGCACTGGTAAAATTGTACGTATGAATCACACAGAGGTCTTGCAGTATATGCAAAGACGTAGAAGTTTCAGACTGCTCTATGGAGCGATAGGTTGCGACGACAGGCTCGGAAATAGGTTAGAGAAGTGTTGTATGACGATGACGACGACGACGATACACAGTAGCAGGGAGTTTTTTGTTGATAGAGTTTAGTGTAGAGAAGGAAGTTTGAATAATGTTGACAGAACTGTTAGTTGGAAGTTTGATTAGCAATTATGATCGCACATATATTCATTTTAACGATACAAGACAAGTTTTGGAGTGG ATGTTGAGCGGCGGTGTCGGCGGTGGAAGCGTTTACTGGGGCACGAGGAACGAGCCCAGGATTTGTAGAGGGGTTGTCGTTCTCTTCGCTTGGGTTTCGATTCAGCATCGCCACTTGGATAAGTTCGTCCAGCTTTACGCCTCGCTTGGATGGAATTCCCTTGTTTGTTATGCTGATTTTCTCAATATATTTGATCCTGAAAGAGCTACATCACTGGCATTTCTTGTTCTTAATGAGCTCGTTGAGGAGCTAAGAATGAAGCTGCGTCCTGTAGTTTTTGTAGGTCTAAGTGGTGCATCAAAGGCTTGTATGTGCAGAGTTTTGCAGATCATTGAGGGAAGATGTGGCAGTCCACTTTACATGGCGGAATGTCAAATGATCAGAGCTTGTGTTTCTGGGCACATCTATGATTCCAGTCCCATAGAGCTTATAAGTGACTTGGGCGCTCGATTTGCCATACATCCTGCTATTCGAAAAGTGCCCGGATCGTCACAACTCATCTCCTGGCTTGCTAAAGGCGTCTCTTCTGGTCTTGATGCTCTATATCTTACTAGATTTGATTCACAGCGCGATGAGTATTGGCGAACACTGTGTTCATCTGTTAATATTGGTGCCCCATTTCTCATTATGTGCTCTGAAAAGGACGATCGTGCTCCGTATAAAGTTATCTGTGATTTCACCAAGAGTATTCAAGAATTAGGGGGTGATGTTCAGTTGGTAAAATTCAAAGACTCCCCACACTTAGGTCATTACAAAAATTACCCAGCTCAATATAGAGCTGCTGTGACCATATTTCTTGAGAAGGCATCATCAGCTTACTCCCACAAAATCCCACAATTTAAAGGAGAAAGAAGAGGAATGGAAGGCGATGGAATGCCTGAATTGATATGTGACCTTCAGAATGCAGCAGTTAATTCAAACCAGAGTTTTCGAAGAGTCGCAGTCGGGCCTAGTGATCACTTCTTCTTGCCAAGCTCAGCAGATTCCCAGGACGGTCGGGAGCATCATCCTCCCATGCCTGATCAGAAAGAAAGAATATCTCCACTTTCAAGCCCCCAAGGAATCAGTGCACACAGCGTACTCGGCCAGTTCCTCTTCGACGTTTGTGTGCCCAAAAATGTTGAAGGTTGGGACATCAAGTTCCACGGCTCTCTGAACGGGCAACCACTTGCTTCAGCTCGCAGGCACTCTCCCTTCCCCGGTACAAAGCTTATCCGTCGCTCTAGACTGTGA
BLAST of CmoCh04G005380 vs. TrEMBL
Match: A0A0A0LBZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207950 PE=4 SV=1) HSP 1 Score: 766.5 bits (1978), Expect = 1.6e-218 Identity = 371/410 (90.49%), Postives = 382/410 (93.17%), Query Frame = 1
BLAST of CmoCh04G005380 vs. TrEMBL
Match: M5W2Y6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006333mg PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 6.4e-151 Identity = 261/410 (63.66%), Postives = 320/410 (78.05%), Query Frame = 1
BLAST of CmoCh04G005380 vs. TrEMBL
Match: W9RYD5_9ROSA (B3 domain-containing protein OS=Morus notabilis GN=L484_027548 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148 Identity = 261/402 (64.93%), Postives = 312/402 (77.61%), Query Frame = 1
BLAST of CmoCh04G005380 vs. TrEMBL
Match: A0A061E1N5_THECC (Peptide methionine sulfoxide reductase msrA OS=Theobroma cacao GN=TCM_007034 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 8.1e-146 Identity = 253/405 (62.47%), Postives = 315/405 (77.78%), Query Frame = 1
BLAST of CmoCh04G005380 vs. TrEMBL
Match: D7TPK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00650 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 2.4e-145 Identity = 252/405 (62.22%), Postives = 316/405 (78.02%), Query Frame = 1
BLAST of CmoCh04G005380 vs. TAIR10
Match: AT2G15695.1 (AT2G15695.1 Protein of unknown function DUF829, transmembrane 53) HSP 1 Score: 460.3 bits (1183), Expect = 1.2e-129 Identity = 233/421 (55.34%), Postives = 291/421 (69.12%), Query Frame = 1
BLAST of CmoCh04G005380 vs. TAIR10
Match: AT5G44250.1 (AT5G44250.1 Protein of unknown function DUF829, transmembrane 53) HSP 1 Score: 347.8 bits (891), Expect = 9.0e-96 Identity = 182/410 (44.39%), Postives = 254/410 (61.95%), Query Frame = 1
BLAST of CmoCh04G005380 vs. NCBI nr
Match: gi|659112201|ref|XP_008456111.1| (PREDICTED: uncharacterized protein LOC103496148 [Cucumis melo]) HSP 1 Score: 767.3 bits (1980), Expect = 1.3e-218 Identity = 373/410 (90.98%), Postives = 381/410 (92.93%), Query Frame = 1
BLAST of CmoCh04G005380 vs. NCBI nr
Match: gi|449445864|ref|XP_004140692.1| (PREDICTED: uncharacterized protein LOC101216799 [Cucumis sativus]) HSP 1 Score: 766.5 bits (1978), Expect = 2.3e-218 Identity = 371/410 (90.49%), Postives = 382/410 (93.17%), Query Frame = 1
BLAST of CmoCh04G005380 vs. NCBI nr
Match: gi|657963136|ref|XP_008373168.1| (PREDICTED: uncharacterized protein LOC103436514 [Malus domestica]) HSP 1 Score: 547.0 bits (1408), Expect = 2.9e-152 Identity = 265/414 (64.01%), Postives = 323/414 (78.02%), Query Frame = 1
BLAST of CmoCh04G005380 vs. NCBI nr
Match: gi|645261924|ref|XP_008236527.1| (PREDICTED: uncharacterized protein LOC103335294 [Prunus mume]) HSP 1 Score: 546.6 bits (1407), Expect = 3.7e-152 Identity = 261/410 (63.66%), Postives = 320/410 (78.05%), Query Frame = 1
BLAST of CmoCh04G005380 vs. NCBI nr
Match: gi|595792385|ref|XP_007199941.1| (hypothetical protein PRUPE_ppa006333mg [Prunus persica]) HSP 1 Score: 542.0 bits (1395), Expect = 9.2e-151 Identity = 261/410 (63.66%), Postives = 320/410 (78.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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