CmoCh04G004500 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G004500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr04 : 2244209 .. 2245881 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATGATGTTAATGAGGCAAAATCGAGTAAATCGCTATGCTGCTCGCGGCGCTAATCAATACATAAATTCACTACTGTCAATTTTATCATTCCTATGTCTTCTGACGATGGTACTTCTTTTTACGATTATACCTCTTCCCTTCCCCTTTCTTTCAATGCAAACATAATGTTCCCATTTCAATTACTGTAATTGAATCACGTTATCAAAACATATATTTATTGAATTGTGATTTCTTTTTTTTGTTTAATTCTGGAAAATATCGAATTCATGTCGCAAATCTTACTTGCATGTTTTCTGTAATTTTCAGGCAATCGTTTTTATAGGATATCTCCATCATGCATCAGGTTCGTATTTGTTACTAAACTCGGAGGGACAGTAGCTAAGTTAATTAAGTTGGCTGGATGCCTACACGATGAAGCAACATCGTTTTAGATTTCAAACTTTTAAATGCATATTTTTGTTTTTTATCTTTCAAAATATAGAAATTTTGCTCCTCATTGTTACATTCACAAAAATTGTTTATCAAATGAATTTAACTTGCTGACATAGACATGAATTGAAGCCACATAAGTTAGCCGAGGTAGCCATGGAGACAAATTAACAAGGGACAAAATAGTTCTCTTTTTTTAAAAAAGGTATTTGGGACCAAAATAGGGCAAGTCCGAAAGTATAGAGATAAGAGACTTTAGCAAAGACGAGAAAAAAAAAAAAACAAATAAACAAGGCTTTTATCTTTTTTGTTTGATATCCAAATTCTTTTCTTCTCAAATTTGTTTTCCTTTTTGTTTGATATCCAAGTTCTTTTCTTCTCAATTTTTTTTTTGTTTTGAACTTCTAATTTGAAGTTGTCTTCACTGTTATATAATATTTTCTATTCTTAATCTGAATATGCGCATCTAATTTCTTCTTATTCTTTATCTTCACATGGTAGGTGGGCAGGGAAGTATCACAGATGTTGAGAATGACGTTGAAGGTATTCTGTCTTATCTTTACGAAGTCACTACAACGACTTTTAATAATTAGTACAATAACATTGCAGCATTGCTTCACTGAGAATATAATTCAGTTATCAATCAAGCTTGGTTAAAATTGAAAAAATGGATTTTGACCGTCTTGAACCAAAATTCCTGTTCCATATTAGTGGTATAGATTTTGTAATTCGTCTGGAATTCCTCATAATTGATCAATTTGTTAATGATGACTTTGTTTTAAGTTCTATATGGACAAGGAGCACTTTGCGTAGGTCATATCAGAATAAATAACATTGCCTTCGTTTCATATATCACTGAGATTTGGACTAACTCCTCTACTCCCAGTTGGTCTCTCAACAATCTATAGCTCGGCCCATGGTAGAAAAAGAATACTAGATTATCATTGTTTGTAGGTAATACAATTGCTTATTTGGTATTCCGTGATTTGTTTGAACATTTGGAACCTTGAGCTTGCTAAAGTTAGACAGCTGAATTTTCTTCATGGATTTGGAAATTAGATTAGGCCACTTGAGAATTACCATAAAGGTCCATGTACACCAATGTACTGCTAGTGTTCTCGATCATTCTCATTTATAAATTTCTTTTTATTAATTTAGAAAGAACTAAAAGTACAGAAGAAAAGAACCTCATGAGTGGAAAACAATTTATAACTGAAGTTTTTGAAGGAAACGATTGA

mRNA sequence

ATGACTATGATGTTAATGAGGCAAAATCGAGTAAATCGCTATGCTGCTCGCGGCGCTAATCAATACATAAATTCACTACTGTCAATTTTATCATTCCTATGTCTTCTGACGATGGCAATCGTTTTTATAGGATATCTCCATCATGCATCAGGTGGGCAGGGAAGTATCACAGATGTTGAGAATGACGTTGAAGAAAGAACTAAAAGTACAGAAGAAAAGAACCTCATGAGTGGAAAACAATTTATAACTGAAGTTTTTGAAGGAAACGATTGA

Coding sequence (CDS)

ATGACTATGATGTTAATGAGGCAAAATCGAGTAAATCGCTATGCTGCTCGCGGCGCTAATCAATACATAAATTCACTACTGTCAATTTTATCATTCCTATGTCTTCTGACGATGGCAATCGTTTTTATAGGATATCTCCATCATGCATCAGGTGGGCAGGGAAGTATCACAGATGTTGAGAATGACGTTGAAGAAAGAACTAAAAGTACAGAAGAAAAGAACCTCATGAGTGGAAAACAATTTATAACTGAAGTTTTTGAAGGAAACGATTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G004500.1CmoCh04G004500.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 90..90
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G004500Carg08095Silver-seed gourdcarcmoB0514
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G004500Cucumber (Chinese Long) v3cmocucB0836
CmoCh04G004500Cucumber (Chinese Long) v3cmocucB0910
CmoCh04G004500Watermelon (97103) v2cmowmbB684
CmoCh04G004500Watermelon (97103) v2cmowmbB696
CmoCh04G004500Watermelon (97103) v2cmowmbB771
CmoCh04G004500Wax gourdcmowgoB0810
CmoCh04G004500Cucurbita moschata (Rifu)cmocmoB125
CmoCh04G004500Cucurbita moschata (Rifu)cmocmoB286
CmoCh04G004500Cucurbita moschata (Rifu)cmocmoB395
CmoCh04G004500Cucumber (Gy14) v1cgycmoB0632
CmoCh04G004500Cucumber (Gy14) v1cgycmoB0910
CmoCh04G004500Cucurbita maxima (Rimu)cmacmoB156
CmoCh04G004500Cucurbita maxima (Rimu)cmacmoB338
CmoCh04G004500Cucurbita maxima (Rimu)cmacmoB530
CmoCh04G004500Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G004500Wild cucumber (PI 183967)cmocpiB716
CmoCh04G004500Wild cucumber (PI 183967)cmocpiB777
CmoCh04G004500Cucumber (Chinese Long) v2cmocuB707
CmoCh04G004500Cucumber (Chinese Long) v2cmocuB769
CmoCh04G004500Cucumber (Chinese Long) v2cmocuB770
CmoCh04G004500Melon (DHL92) v3.5.1cmomeB665
CmoCh04G004500Melon (DHL92) v3.5.1cmomeB689
CmoCh04G004500Melon (DHL92) v3.5.1cmomeB692
CmoCh04G004500Watermelon (Charleston Gray)cmowcgB607
CmoCh04G004500Watermelon (Charleston Gray)cmowcgB610
CmoCh04G004500Watermelon (97103) v1cmowmB648
CmoCh04G004500Cucurbita pepo (Zucchini)cmocpeB668
CmoCh04G004500Cucurbita pepo (Zucchini)cmocpeB672
CmoCh04G004500Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G004500Cucurbita pepo (Zucchini)cmocpeB703
CmoCh04G004500Bottle gourd (USVL1VR-Ls)cmolsiB646
CmoCh04G004500Bottle gourd (USVL1VR-Ls)cmolsiB650
CmoCh04G004500Cucumber (Gy14) v2cgybcmoB526
CmoCh04G004500Cucumber (Gy14) v2cgybcmoB948
CmoCh04G004500Melon (DHL92) v3.6.1cmomedB751
CmoCh04G004500Melon (DHL92) v3.6.1cmomedB782
CmoCh04G004500Melon (DHL92) v3.6.1cmomedB786
CmoCh04G004500Silver-seed gourdcarcmoB0403
CmoCh04G004500Silver-seed gourdcarcmoB0616
CmoCh04G004500Silver-seed gourdcarcmoB0999