CmoCh04G004030 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G004030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Tudor/PWWP/MBT superfamily protein
Location	Cmo_Chr04 : 1986482 .. 1987333 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTTCCAGTTGATTCAGTGGAGAGCAAAGAATCCTCTCATGGCCAAGTTGAGATGTCAACGAACTGTTTAGAACTTGGCATTCTGCCTTCTCAGCTCGATTTCCTGGTTGAAGATGATGCTTCTAGTTCATCTGAAAACGACTCTTCTGATTTAGAGACTGATTCTAATTCTTCCATGTCGGATAAGGAAGTAGATAATTACATGGCTTATCATCACGACCTAATGTCTAAGTGGCAATTGAAGGGGAAAAGGAACGTTCGAAATCTTTCGAAAAAGTCTGCTGGACTTAAAAAGGAGTATTTCGATGACACAACAGAGCAAGCTCGAGCTGAGGCAATGGAAGAGGAGTATTACTTAACGTCAAAAAGGGCATCAAAGGATCAAAATCTTGTAGGAAATTACATGTCGGACTGGGAGGATCAGCAGCCTGATTTGAAAGGATATCGGGACATGAAACATCGCTTATACGATACATGTCATCGTTTTGGTGGGAGGTTAAGAACTATATTAACAGAGGTTGATCTAAAAGTCCAAGCAAATTACCAGAAAGAGCCTGTTCCTATTGTATCACTAGTGAGCAAGTTAAATGGGCAAGCTATAATTGGGCATCCTATTCAAATTGAAGCTCTACAAGACGGGATTTCTGAAGCTCTTCTTTCAGATAGTCTAGGCAATCAACCAGCTTGGAGGACTGCAAGGAGGACAGCAAATGTTCGCATCCCTCGCACTCGTTTACCGACAACAGTACTGGACGGTGAAGAGGCAAGCGGCCCTCACAGTCCCCGACCTTCTCGTGACAGAAGGCTGCCAAAAAGGATGTCAAAAGAAAGCAAGCCTATCAACTAA

mRNA sequence

ATGCGTCTTCCAGTTGATTCAGTGGAGAGCAAAGAATCCTCTCATGGCCAAGTTGAGATGTCAACGAACTGTTTAGAACTTGGCATTCTGCCTTCTCAGCTCGATTTCCTGGTTGAAGATGATGCTTCTAGTTCATCTGAAAACGACTCTTCTGATTTAGAGACTGATTCTAATTCTTCCATGTCGGATAAGGAAGTAGATAATTACATGGCTTATCATCACGACCTAATGTCTAAGTGGCAATTGAAGGGGAAAAGGAACGTTCGAAATCTTTCGAAAAAGTCTGCTGGACTTAAAAAGGAGTATTTCGATGACACAACAGAGCAAGCTCGAGCTGAGGCAATGGAAGAGGAGTATTACTTAACGTCAAAAAGGGCATCAAAGGATCAAAATCTTGTAGGAAATTACATGTCGGACTGGGAGGATCAGCAGCCTGATTTGAAAGGATATCGGGACATGAAACATCGCTTATACGATACATGTCATCGTTTTGGTGGGAGGTTAAGAACTATATTAACAGAGGTTGATCTAAAAGTCCAAGCAAATTACCAGAAAGAGCCTGTTCCTATTGTATCACTAGTGAGCAAGTTAAATGGGCAAGCTATAATTGGGCATCCTATTCAAATTGAAGCTCTACAAGACGGGATTTCTGAAGCTCTTCTTTCAGATAGTCTAGGCAATCAACCAGCTTGGAGGACTGCAAGGAGGACAGCAAATGTTCGCATCCCTCGCACTCGTTTACCGACAACAGTACTGGACGGTGAAGAGGCAAGCGGCCCTCACAGTCCCCGACCTTCTCGTGACAGAAGGCTGCCAAAAAGGATGTCAAAAGAAAGCAAGCCTATCAACTAA

Coding sequence (CDS)

ATGCGTCTTCCAGTTGATTCAGTGGAGAGCAAAGAATCCTCTCATGGCCAAGTTGAGATGTCAACGAACTGTTTAGAACTTGGCATTCTGCCTTCTCAGCTCGATTTCCTGGTTGAAGATGATGCTTCTAGTTCATCTGAAAACGACTCTTCTGATTTAGAGACTGATTCTAATTCTTCCATGTCGGATAAGGAAGTAGATAATTACATGGCTTATCATCACGACCTAATGTCTAAGTGGCAATTGAAGGGGAAAAGGAACGTTCGAAATCTTTCGAAAAAGTCTGCTGGACTTAAAAAGGAGTATTTCGATGACACAACAGAGCAAGCTCGAGCTGAGGCAATGGAAGAGGAGTATTACTTAACGTCAAAAAGGGCATCAAAGGATCAAAATCTTGTAGGAAATTACATGTCGGACTGGGAGGATCAGCAGCCTGATTTGAAAGGATATCGGGACATGAAACATCGCTTATACGATACATGTCATCGTTTTGGTGGGAGGTTAAGAACTATATTAACAGAGGTTGATCTAAAAGTCCAAGCAAATTACCAGAAAGAGCCTGTTCCTATTGTATCACTAGTGAGCAAGTTAAATGGGCAAGCTATAATTGGGCATCCTATTCAAATTGAAGCTCTACAAGACGGGATTTCTGAAGCTCTTCTTTCAGATAGTCTAGGCAATCAACCAGCTTGGAGGACTGCAAGGAGGACAGCAAATGTTCGCATCCCTCGCACTCGTTTACCGACAACAGTACTGGACGGTGAAGAGGCAAGCGGCCCTCACAGTCCCCGACCTTCTCGTGACAGAAGGCTGCCAAAAAGGATGTCAAAAGAAAGCAAGCCTATCAACTAA

Homology

[Close]

BLAST of CmoCh04G004030 vs. TrEMBL
Match: A0A0A0KY08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G114200 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.3e-61
Identity = 172/375 (45.87%), Postives = 206/375 (54.93%), Query Frame = 1


Query: 6   DSVESKESSHGQVEMSTNCLELGILP---------------------SQLD--------- 65
           DS+E +ESS GQVEMST  L  G++P                     S+ D         
Sbjct: 186 DSLECRESSLGQVEMSTPDLGTGVMPSQPNSLLEGNASGSSENDSSDSETDSDSSRSDQD 245

Query: 66  ----FLVEDDASSSSENDSSDLE---TDSNSSMSDKEVDNYM-------AYHHD------ 125
                    D++  SE + S  E   T  + +MS +E D+ +        YHHD      
Sbjct: 246 MDNEMTALSDSTLPSEKELSTFERTDTREHGNMSSEEPDDSVHSGDMSHLYHHDPVSTNE 305

Query: 126 LMSKWQLKGKRNVRNLSKKSAGLKKE------------------YFDDTTEQARAEAMEE 185
            +SKW+LKGKRNVRN SKK  G+ +E                  YFDD+ +    +A+EE
Sbjct: 306 AVSKWKLKGKRNVRNFSKKLVGVDEEPSSHLWVHARTRLNNRNDYFDDSMD--GVDALEE 365

Query: 186 EYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDL 245
           EYYLTSK  SKDQ  V NY+ DWE  QP LKGY D+K+ LY   H FG R RTIL +VDL
Sbjct: 366 EYYLTSKMVSKDQYFVRNYLPDWEG-QPALKGYWDVKNPLYGIPHHFGERPRTILIDVDL 425

Query: 246 KVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLSDSLGN---------- 279
           KV A+YQKEPVPIVSL+SKLNGQAIIGHPIQIE L+DG SE +LSDSLGN          
Sbjct: 426 KVHASYQKEPVPIVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTA 485

[Close]

BLAST of CmoCh04G004030 vs. TrEMBL
Match: W9QDJ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019705 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 128/308 (41.56%), Postives = 176/308 (57.14%), Query Frame = 1


Query: 6   DSVESKESSHGQVEMSTNCLELGILPSQLDFLVEDDASSSSENDSSD------LETDSNS 65
           D+ ES+  S    +M     E+ IL S      E + SS    D+ +      LE D  +
Sbjct: 392 DTSESESDSSETEDMDE---EMAIL-SDAAVPTEPEVSSMGRYDAQEHGSMGGLEPDEPT 451

Query: 66  SMSDKE--VDNYMAYHHDLMSKWQLKGKRNVRNLSKKSAG-------LKKEYFDDTTEQA 125
              D      +Y +  ++ +SKWQLKGKRN+RNL+K+ A        +   Y D+  +  
Sbjct: 452 LSGDMSHFYGHYPSSTNEAVSKWQLKGKRNIRNLTKRPADATDWKGYIYGAYPDE--KDF 511

Query: 126 RAEAME-EEYYLTSKRASKDQNLVGNYMSDWEDQ----QPDLKGYRDMKHR----LYDTC 185
           RAE +E +  Y +S+ A + ++ VG  M DW+D     QP L+GY D K      +YD+ 
Sbjct: 512 RAEMIELDNGYSSSRAAFRGRSSVGRSMIDWDDSSWEDQPSLRGYWDTKREHFDPVYDSR 571

Query: 186 HRFGGRLRTILTEVDLKVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALL 245
           ++FGGR R++L +VDLKVQA+YQKEPVPIVSL+SKLNG+AIIGHPIQIE L+DG S  LL
Sbjct: 572 YQFGGRSRSMLMDVDLKVQASYQKEPVPIVSLMSKLNGKAIIGHPIQIETLEDGSSSNLL 631

Query: 246 --SDSLGNQ-----------PAWRTARRTANVRIPRTRLPTTVLDGEEASGPHSPRPSRD 277
              D  GN+            AWRTARRTAN R+PR  L ++ LDG+EA+    P   R+
Sbjct: 632 PTMDYFGNEAIENDGSTALPQAWRTARRTANFRVPRPHL-SSALDGDEAAYDF-PFLDRE 691

[Close]

BLAST of CmoCh04G004030 vs. TrEMBL
Match: M5X670_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001649mg PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 131/328 (39.94%), Postives = 171/328 (52.13%), Query Frame = 1


Query: 3   LPVDSVESKE---SSHGQVEMSTNCLELGILPSQLDFLVED-------DASSSSENDSSD 62
           LP +S ES E   +   QVE+S + +      S  + L+E+       D S SSE DSS+
Sbjct: 336 LPAESGESLEYEAAPSNQVEISASPVGAR---SHAEALIEENTSGFTEDESDSSETDSSE 395

Query: 63  LETDSN----------SSMSDKEV-----------------------DNYMAYHHD---- 122
            E+DS+            +S+ EV                       D    Y HD    
Sbjct: 396 SESDSSETEPDMDEEMPLLSEPEVGRYEAREHGIMVGDEPDESTHSGDMSHLYSHDPLFA 455

Query: 123 --LMSKWQLKGKRNVRNLSKKSAGLKKEYFDDTTEQARAEAMEEEYYLTSKRASKDQNLV 182
              +SKWQLKGKRN+RNL+K+S         D          EE+    S+RA+ D N  
Sbjct: 456 SEAVSKWQLKGKRNIRNLTKRSMDA-----TDGRGYIYGPYSEEKVCPFSQRANVDNN-- 515

Query: 183 GNYMSDWED----------QQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDLKVQANY 242
            ++ +DWED          +  D+K  RD  H +YD  + +  R R  L +VDLKVQA+Y
Sbjct: 516 -DFQTDWEDSTWEDRSAWNEYWDIK--RDRFHPVYDGRYHYRRRPR-YLIDVDLKVQASY 575

Query: 243 QKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLS--DSLGNQP-----------A 259
           QKEPVPIVSL+SKLNG+AIIGHPIQIEAL+DG S +LLS  D  G +            A
Sbjct: 576 QKEPVPIVSLMSKLNGKAIIGHPIQIEALEDGSSNSLLSTVDEFGEEAVDNNGGATVPHA 635

[Close]

BLAST of CmoCh04G004030 vs. TrEMBL
Match: A5AE26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020829 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29
Identity = 88/208 (42.31%), Postives = 114/208 (54.81%), Query Frame = 1


Query: 119 YYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTC----HRFGGRLRTILTE 178
           Y LTSK A + +N++      WEDQ P LKGY +     +D      H   GR++T L +
Sbjct: 545 YSLTSKTAPRARNMIDWEELTWEDQ-PALKGYWEDTGECFDPIFVGRHNPAGRIKTTLVD 604

Query: 179 VDLKVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLS--DSLGNQ---- 238
           VDL+VQ NYQ+E VPI+SL+S+LN ++I+GHPIQIEAL+DG SE LLS  +  GN     
Sbjct: 605 VDLRVQTNYQREHVPIISLMSRLNDKSIVGHPIQIEALEDGSSEMLLSSNEDFGNDVFDN 664

Query: 239 -------PAWRTARRTANVRIPRTRLPTTVLDGEEA------------------------ 278
                  P WRTARRTAN R+PR   P++ LDG+EA                        
Sbjct: 665 DRNRAIPPVWRTARRTANFRVPRPH-PSSALDGDEAVEDLPFLDQGRKSTYKKSNAGNSG 724

[Close]

BLAST of CmoCh04G004030 vs. TrEMBL
Match: F6HEG8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02450 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 97/271 (35.79%), Postives = 134/271 (49.45%), Query Frame = 1


Query: 56  DSNSSMSDKEVDNYMAYHHDLMSKWQLKGKRNVRNLSKKSAGLKKEYFDDTTEQARAEAM 115
           ++ ++M  + +   M +HH   S        +  +L +K  G +    D           
Sbjct: 496 ENGNTMGQRTLGQSMMFHH---SSNDFDNDLHEADLIEKDFGTQMAGLDG---------- 555

Query: 116 EEEYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTC----HRFGGRLRTI 175
              Y LTSK A + +N++      WEDQ P LKGY +     +D      H   GR++T 
Sbjct: 556 -RGYSLTSKTAPRARNMIDWEELTWEDQ-PALKGYWEDTGECFDPIFVGRHNPAGRIKTT 615

Query: 176 LTEVDLKVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLS--DSLGNQ- 235
           L +VDL+VQ NYQ+E VPI+SL+S+LN ++I+GHPIQIEAL+DG SE LLS  +  GN  
Sbjct: 616 LVDVDLRVQTNYQREHVPIISLMSRLNDKSIVGHPIQIEALEDGSSEMLLSSNEDFGNDV 675

Query: 236 ----------PAWRTARRTANVRIPRTRLPTTVLDGEEA--------------------- 278
                     P WRTARRTAN R+PR   P++ LDG+EA                     
Sbjct: 676 FDNDRNRAIPPVWRTARRTANFRVPRPH-PSSALDGDEAVEDLPFLDQGRKSTYKKSNAG 735

[Close]

BLAST of CmoCh04G004030 vs. TAIR10
Match: AT3G03140.1 (AT3G03140.1 Tudor/PWWP/MBT superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-20
Identity = 62/152 (40.79%), Postives = 90/152 (59.21%), Query Frame = 1


Query: 117 EEYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHR----------LYDTCHR-FG 176
           ++Y L++  AS+ +N+  + M DW+D     +G   MK R           +D   R FG
Sbjct: 467 DDYQLSNVVASRCKNIYSHDMLDWDDDP--WEGRIGMKKRGEEKLEGLGQEFDVSERHFG 526

Query: 177 GRLRTILTEVDLKVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLS--D 236
            +  + L +VDL+V+ +YQK PVPIVSL+SKLNG+AIIGHP+++E L DG SE+ +   D
Sbjct: 527 RKTYSSLMDVDLEVRGSYQKGPVPIVSLMSKLNGRAIIGHPVEVEVLADGSSESYIQTID 586

Query: 237 SLGNQ-----------PAWRTARRTANVRIPR 245
             GN+            AW+TARR +N R+PR
Sbjct: 587 YFGNETTYQDKTFLLPSAWKTARR-SNSRVPR 615

[Close]

BLAST of CmoCh04G004030 vs. TAIR10
Match: AT3G21295.1 (AT3G21295.1 Tudor/PWWP/MBT superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = 1


Query: 78  SKWQLKGKRNVRNLSKKSAGLKKEYFDDTTEQARAEAMEEEYYLTSKRASKDQNLVGNYM 137
           SKWQLKGKRN R +SKK    +  Y ++    A                          +
Sbjct: 431 SKWQLKGKRNSRQMSKKQVERRNAYAEEANNNA--------------------------L 490

Query: 138 SDWE--DQQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDLKVQANYQKEPVPIVSLVS 197
             W   DQ+P           L+    +  GR  + L +V ++V+ANY+   VP++SL S
Sbjct: 491 PHWSVSDQKP---------RSLFSVGTQAMGR-NSELYDVKIEVKANYKPRNVPLISLRS 534

Query: 198 KLNGQAIIGHPIQIEALQDG 216
           KLNG+AI+GHP  +E L+DG
Sbjct: 551 KLNGEAIVGHPSVVEVLEDG 534

[Close]

BLAST of CmoCh04G004030 vs. TAIR10
Match: AT1G51745.1 (AT1G51745.1 Tudor/PWWP/MBT superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 9.2e-07
Identity = 22/50 (44.00%), Postives = 38/50 (76.00%), Query Frame = 1


Query: 172 LTEVDLKVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALL 222
           L EV ++V+A+Y K  VP+VS +S+L+G+AI+GHP+ +E L++  S  ++
Sbjct: 485 LYEVKIEVKASYTKPRVPLVSRMSELSGKAIVGHPLSVEILEEDYSNGMV 534

[Close]

BLAST of CmoCh04G004030 vs. NCBI nr
Match: gi|659101574|ref|XP_008451679.1| (PREDICTED: uncharacterized protein At1g51745 isoform X3 [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 176/376 (46.81%), Postives = 209/376 (55.59%), Query Frame = 1


Query: 6   DSVESKESSHGQVEMSTNCLELGILP-------------------SQLD----------- 65
           DS+E +ESS GQVEMST  L  G++P                   S L+           
Sbjct: 269 DSLECRESSLGQVEMSTPDLGPGVMPSRPDSLLEENASGSSENDSSDLETDSDSSRSDQD 328

Query: 66  ----FLVEDDASSSSENDSSDLE---TDSNSSMSDKEVDNYM-------AYHHD------ 125
                    D++  SE + S  E   T  + +MS +E D+ +        YHHD      
Sbjct: 329 MDNEMTALSDSTLPSEKEPSTFERTDTREHENMSSEEPDDSVHSGDMSHLYHHDPVSTNE 388

Query: 126 LMSKWQLKGKRNVRNLSKKSAGL------------------KKEYFDDTTEQARAEAMEE 185
            +SKW+LKGKRNVRN SKK  G+                  + +YFDD+ +    +A+EE
Sbjct: 389 AVSKWKLKGKRNVRNFSKKLVGVDDEPSSHLWVHAQTRLNNRNDYFDDSMD--GVDALEE 448

Query: 186 EYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDL 245
           EYYLTSK  SKDQ  V NY+ DWE  QP LKGY D+K+ LY   H FGGR RTIL +VDL
Sbjct: 449 EYYLTSKMVSKDQYFVRNYLPDWEG-QPALKGYWDVKNPLYGIPHHFGGRPRTILIDVDL 508

Query: 246 KVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLSDSLGN---------- 279
           KV A+YQKEPVPIVSL+SKLNGQAIIGHPIQIE L+DG SE +LSDSLGN          
Sbjct: 509 KVHASYQKEPVPIVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTA 568

[Close]

BLAST of CmoCh04G004030 vs. NCBI nr
Match: gi|659101572|ref|XP_008451678.1| (PREDICTED: uncharacterized protein At1g51745 isoform X2 [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 176/376 (46.81%), Postives = 209/376 (55.59%), Query Frame = 1


Query: 6   DSVESKESSHGQVEMSTNCLELGILP-------------------SQLD----------- 65
           DS+E +ESS GQVEMST  L  G++P                   S L+           
Sbjct: 275 DSLECRESSLGQVEMSTPDLGPGVMPSRPDSLLEENASGSSENDSSDLETDSDSSRSDQD 334

Query: 66  ----FLVEDDASSSSENDSSDLE---TDSNSSMSDKEVDNYM-------AYHHD------ 125
                    D++  SE + S  E   T  + +MS +E D+ +        YHHD      
Sbjct: 335 MDNEMTALSDSTLPSEKEPSTFERTDTREHENMSSEEPDDSVHSGDMSHLYHHDPVSTNE 394

Query: 126 LMSKWQLKGKRNVRNLSKKSAGL------------------KKEYFDDTTEQARAEAMEE 185
            +SKW+LKGKRNVRN SKK  G+                  + +YFDD+ +    +A+EE
Sbjct: 395 AVSKWKLKGKRNVRNFSKKLVGVDDEPSSHLWVHAQTRLNNRNDYFDDSMD--GVDALEE 454

Query: 186 EYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDL 245
           EYYLTSK  SKDQ  V NY+ DWE  QP LKGY D+K+ LY   H FGGR RTIL +VDL
Sbjct: 455 EYYLTSKMVSKDQYFVRNYLPDWEG-QPALKGYWDVKNPLYGIPHHFGGRPRTILIDVDL 514

Query: 246 KVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLSDSLGN---------- 279
           KV A+YQKEPVPIVSL+SKLNGQAIIGHPIQIE L+DG SE +LSDSLGN          
Sbjct: 515 KVHASYQKEPVPIVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTA 574

[Close]

BLAST of CmoCh04G004030 vs. NCBI nr
Match: gi|659101570|ref|XP_008451676.1| (PREDICTED: uncharacterized protein At1g51745 isoform X1 [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 176/376 (46.81%), Postives = 209/376 (55.59%), Query Frame = 1


Query: 6   DSVESKESSHGQVEMSTNCLELGILP-------------------SQLD----------- 65
           DS+E +ESS GQVEMST  L  G++P                   S L+           
Sbjct: 278 DSLECRESSLGQVEMSTPDLGPGVMPSRPDSLLEENASGSSENDSSDLETDSDSSRSDQD 337

Query: 66  ----FLVEDDASSSSENDSSDLE---TDSNSSMSDKEVDNYM-------AYHHD------ 125
                    D++  SE + S  E   T  + +MS +E D+ +        YHHD      
Sbjct: 338 MDNEMTALSDSTLPSEKEPSTFERTDTREHENMSSEEPDDSVHSGDMSHLYHHDPVSTNE 397

Query: 126 LMSKWQLKGKRNVRNLSKKSAGL------------------KKEYFDDTTEQARAEAMEE 185
            +SKW+LKGKRNVRN SKK  G+                  + +YFDD+ +    +A+EE
Sbjct: 398 AVSKWKLKGKRNVRNFSKKLVGVDDEPSSHLWVHAQTRLNNRNDYFDDSMD--GVDALEE 457

Query: 186 EYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDL 245
           EYYLTSK  SKDQ  V NY+ DWE  QP LKGY D+K+ LY   H FGGR RTIL +VDL
Sbjct: 458 EYYLTSKMVSKDQYFVRNYLPDWEG-QPALKGYWDVKNPLYGIPHHFGGRPRTILIDVDL 517

Query: 246 KVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLSDSLGN---------- 279
           KV A+YQKEPVPIVSL+SKLNGQAIIGHPIQIE L+DG SE +LSDSLGN          
Sbjct: 518 KVHASYQKEPVPIVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTA 577

[Close]

BLAST of CmoCh04G004030 vs. NCBI nr
Match: gi|659101576|ref|XP_008451680.1| (PREDICTED: uncharacterized protein At1g51745 isoform X4 [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 176/376 (46.81%), Postives = 209/376 (55.59%), Query Frame = 1


Query: 6   DSVESKESSHGQVEMSTNCLELGILP-------------------SQLD----------- 65
           DS+E +ESS GQVEMST  L  G++P                   S L+           
Sbjct: 186 DSLECRESSLGQVEMSTPDLGPGVMPSRPDSLLEENASGSSENDSSDLETDSDSSRSDQD 245

Query: 66  ----FLVEDDASSSSENDSSDLE---TDSNSSMSDKEVDNYM-------AYHHD------ 125
                    D++  SE + S  E   T  + +MS +E D+ +        YHHD      
Sbjct: 246 MDNEMTALSDSTLPSEKEPSTFERTDTREHENMSSEEPDDSVHSGDMSHLYHHDPVSTNE 305

Query: 126 LMSKWQLKGKRNVRNLSKKSAGL------------------KKEYFDDTTEQARAEAMEE 185
            +SKW+LKGKRNVRN SKK  G+                  + +YFDD+ +    +A+EE
Sbjct: 306 AVSKWKLKGKRNVRNFSKKLVGVDDEPSSHLWVHAQTRLNNRNDYFDDSMD--GVDALEE 365

Query: 186 EYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDL 245
           EYYLTSK  SKDQ  V NY+ DWE  QP LKGY D+K+ LY   H FGGR RTIL +VDL
Sbjct: 366 EYYLTSKMVSKDQYFVRNYLPDWEG-QPALKGYWDVKNPLYGIPHHFGGRPRTILIDVDL 425

Query: 246 KVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLSDSLGN---------- 279
           KV A+YQKEPVPIVSL+SKLNGQAIIGHPIQIE L+DG SE +LSDSLGN          
Sbjct: 426 KVHASYQKEPVPIVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTA 485

[Close]

BLAST of CmoCh04G004030 vs. NCBI nr
Match: gi|449438989|ref|XP_004137270.1| (PREDICTED: uncharacterized protein At1g51745 isoform X2 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 6.1e-61
Identity = 172/375 (45.87%), Postives = 206/375 (54.93%), Query Frame = 1


Query: 6   DSVESKESSHGQVEMSTNCLELGILP---------------------SQLD--------- 65
           DS+E +ESS GQVEMST  L  G++P                     S+ D         
Sbjct: 278 DSLECRESSLGQVEMSTPDLGTGVMPSQPNSLLEGNASGSSENDSSDSETDSDSSRSDQD 337

Query: 66  ----FLVEDDASSSSENDSSDLE---TDSNSSMSDKEVDNYM-------AYHHD------ 125
                    D++  SE + S  E   T  + +MS +E D+ +        YHHD      
Sbjct: 338 MDNEMTALSDSTLPSEKELSTFERTDTREHGNMSSEEPDDSVHSGDMSHLYHHDPVSTNE 397

Query: 126 LMSKWQLKGKRNVRNLSKKSAGLKKE------------------YFDDTTEQARAEAMEE 185
            +SKW+LKGKRNVRN SKK  G+ +E                  YFDD+ +    +A+EE
Sbjct: 398 AVSKWKLKGKRNVRNFSKKLVGVDEEPSSHLWVHARTRLNNRNDYFDDSMD--GVDALEE 457

Query: 186 EYYLTSKRASKDQNLVGNYMSDWEDQQPDLKGYRDMKHRLYDTCHRFGGRLRTILTEVDL 245
           EYYLTSK  SKDQ  V NY+ DWE  QP LKGY D+K+ LY   H FG R RTIL +VDL
Sbjct: 458 EYYLTSKMVSKDQYFVRNYLPDWEG-QPALKGYWDVKNPLYGIPHHFGERPRTILIDVDL 517

Query: 246 KVQANYQKEPVPIVSLVSKLNGQAIIGHPIQIEALQDGISEALLSDSLGN---------- 279
           KV A+YQKEPVPIVSL+SKLNGQAIIGHPIQIE L+DG SE +LSDSLGN          
Sbjct: 518 KVHASYQKEPVPIVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTA 577

The following BLAST results are available for this feature:

BLAST of CmoCh04G004030 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G004030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY08_CUCSA	4.3e-61	45.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G114200 PE=4 SV=1	[more]
W9QDJ1_9ROSA	2.5e-37	41.56	Uncharacterized protein OS=Morus notabilis GN=L484_019705 PE=4 SV=1	[more]
M5X670_PRUPE	1.1e-32	39.94	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001649mg PE=4 SV=1	[more]
A5AE26_VITVI	1.9e-29	42.31	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020829 PE=4 SV=1	[more]
F6HEG8_VITVI	1.4e-27	35.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02450 PE=4 SV=...	[more]

BLAST of CmoCh04G004030 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03140.1	5.6e-20	40.79	Tudor/PWWP/MBT superfamily protein	[more]
AT3G21295.1	1.6e-11	33.57	Tudor/PWWP/MBT superfamily protein	[more]
AT1G51745.1	9.2e-07	44.00	Tudor/PWWP/MBT superfamily protein	[more]

BLAST of CmoCh04G004030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101574\|ref\|XP_008451679.1\|	1.5e-62	46.81	PREDICTED: uncharacterized protein At1g51745 isoform X3 [Cucumis melo]	[more]
gi\|659101572\|ref\|XP_008451678.1\|	1.5e-62	46.81	PREDICTED: uncharacterized protein At1g51745 isoform X2 [Cucumis melo]	[more]
gi\|659101570\|ref\|XP_008451676.1\|	1.5e-62	46.81	PREDICTED: uncharacterized protein At1g51745 isoform X1 [Cucumis melo]	[more]
gi\|659101576\|ref\|XP_008451680.1\|	1.5e-62	46.81	PREDICTED: uncharacterized protein At1g51745 isoform X4 [Cucumis melo]	[more]
gi\|449438989\|ref\|XP_004137270.1\|	6.1e-61	45.87	PREDICTED: uncharacterized protein At1g51745 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G004030.1	CmoCh04G004030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33697	FAMILY NOT NAMED	coord: 39..257 score: 3.3
None	No IPR available	PANTHER	PTHR33697:SF2	PWWP DOMAIN-CONTAINING PROTEIN	coord: 39..257 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G004030	CmaCh16G002400	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G004030	CmaCh04G003820	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G004030	Csa4G114200	Cucumber (Chinese Long) v2	cmocuB710
CmoCh04G004030	ClCG10G009040	Watermelon (Charleston Gray)	cmowcgB610
CmoCh04G004030	CSPI04G09520	Wild cucumber (PI 183967)	cmocpiB720
CmoCh04G004030	Lsi03G009310	Bottle gourd (USVL1VR-Ls)	cmolsiB646
CmoCh04G004030	Cp4.1LG14g04910	Cucurbita pepo (Zucchini)	cmocpeB671
CmoCh04G004030	Cp4.1LG01g03160	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G004030	CsaV3_4G009690	Cucumber (Chinese Long) v3	cmocucB0841
CmoCh04G004030	Cla97C10G192250	Watermelon (97103) v2	cmowmbB684
CmoCh04G004030	CsGy4G009270	Cucumber (Gy14) v2	cgybcmoB528
CmoCh04G004030	Carg08055	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G004030	CmoCh16G002880	Cucurbita moschata (Rifu)	cmocmoB289

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G004030	Melon (DHL92) v3.6.1	cmomedB788
CmoCh04G004030	Silver-seed gourd	carcmoB1177
CmoCh04G004030	Watermelon (97103) v2	cmowmbB749
CmoCh04G004030	Wax gourd	cmowgoB0810
CmoCh04G004030	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G004030	Cucumber (Gy14) v1	cgycmoB0197
CmoCh04G004030	Wild cucumber (PI 183967)	cmocpiB708
CmoCh04G004030	Cucumber (Chinese Long) v2	cmocuB700
CmoCh04G004030	Melon (DHL92) v3.5.1	cmomeB694
CmoCh04G004030	Watermelon (97103) v1	cmowmB654
CmoCh04G004030	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G004030	Cucumber (Gy14) v2	cgybcmoB516