CmoCh04G003010 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G003010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ring finger protein, putative
Location	Cmo_Chr04 : 1501819 .. 1502880 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTTGTTGTTCATCCTCAAACCAGGGACATTCTGGTTAGTCCTTCCATTGCCCCTCTGCAACCTTCTTCTTCATTGGCATATAACAGCGACTACCAAAAACAATCAGCTCTTCCCAGTTCCTCTAGCAGTAAGATAAGCCCTGCTGTTCTTCTAGTCATAGTTATTCTAGCTCTTCTCTTTTTCATCTCTGGTCTTCTTCACTTGCTTGTGAGATTACTTGTGAAGCAAAGATCTTCACCATCATCAATTCCTGAATCCAATAGTAATAGGTTTCTGGAAATGTCTGATTCATCTGCCTTCCAAAGACAGCTACAGCAGCTCTTCCATCTTCATGATTCGGGTTTAGATCAAGCCTTCATAGATGCACTCCCTGTGTTCCTTTACAAAGAGATAGTGGGATTAAAAGAGCCATTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGAACTAGACAAGCTAAGATTGCTCCCTTCTTGCAGTCATGCTTTTCACATAGATTGTATAGACACATGGTTGCTTTCTAACTCAACGTGCCCTCTTTGTAGAGGGACCCTTTACTCACCTGGACTTGCCATTGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAAACAGAGGAATCTACAGAGGATGGAAGAAGAATTAGTATCCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTAATGGTGAAAAGAGGGTGTTTTCAATCAGACTTGGGAAGTTTAGGAACTTGAATAGTAATGGAGGAGTGAGAGGCTTGGAGAAAGGAGAAGGAGAAACCAGCAGTAGCAGCAGCTTGGGTGCAAGAAGATGCTATTCAATGGGGTCTTATCAGTATATTGTAGCTGATTCAGAATTGCAAGTGGCATTAAGTACGAGCAATCTAAGAGATTCACAAACTGGGAATTGCTCAGTTGATGATGATAATGCGGAAGGGAAGAAGATTAAGATTGGAAGTAAAAATGAAAGCTTTTCTGTTTCGAAGATCTGGTTATGGTCCAAGAAGGGTCGACAGCCAAGTGGCGCAGACACCCATGTGCTGCGAGCTAATTAA

mRNA sequence

ATGTCATTTGTTGTTCATCCTCAAACCAGGGACATTCTGGTTAGTCCTTCCATTGCCCCTCTGCAACCTTCTTCTTCATTGGCATATAACAGCGACTACCAAAAACAATCAGCTCTTCCCAGTTCCTCTAGCAGTAAGATAAGCCCTGCTGTTCTTCTAGTCATAGTTATTCTAGCTCTTCTCTTTTTCATCTCTGGTCTTCTTCACTTGCTTGTGAGATTACTTGTGAAGCAAAGATCTTCACCATCATCAATTCCTGAATCCAATAGTAATAGGTTTCTGGAAATGTCTGATTCATCTGCCTTCCAAAGACAGCTACAGCAGCTCTTCCATCTTCATGATTCGGGTTTAGATCAAGCCTTCATAGATGCACTCCCTGTGTTCCTTTACAAAGAGATAGTGGGATTAAAAGAGCCATTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGAACTAGACAAGCTAAGATTGCTCCCTTCTTGCAGTCATGCTTTTCACATAGATTGTATAGACACATGGTTGCTTTCTAACTCAACGTGCCCTCTTTGTAGAGGGACCCTTTACTCACCTGGACTTGCCATTGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAAACAGAGGAATCTACAGAGGATGGAAGAAGAATTAGTATCCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTAATGGTGAAAAGAGGGTGTTTTCAATCAGACTTGGGAAGTTTAGGAACTTGAATAGTAATGGAGGAGTGAGAGGCTTGGAGAAAGGAGAAGGAGAAACCAGCAGTAGCAGCAGCTTGGGTGCAAGAAGATGCTATTCAATGGGGTCTTATCAGTATATTGTAGCTGATTCAGAATTGCAAGTGGCATTAAGTACGAGCAATCTAAGAGATTCACAAACTGGGAATTGCTCAGTTGATGATGATAATGCGGAAGGGAAGAAGATTAAGATTGGAAGTAAAAATGAAAGCTTTTCTGTTTCGAAGATCTGGTTATGGTCCAAGAAGGGTCGACAGCCAAGTGGCGCAGACACCCATGTGCTGCGAGCTAATTAA

Coding sequence (CDS)

ATGTCATTTGTTGTTCATCCTCAAACCAGGGACATTCTGGTTAGTCCTTCCATTGCCCCTCTGCAACCTTCTTCTTCATTGGCATATAACAGCGACTACCAAAAACAATCAGCTCTTCCCAGTTCCTCTAGCAGTAAGATAAGCCCTGCTGTTCTTCTAGTCATAGTTATTCTAGCTCTTCTCTTTTTCATCTCTGGTCTTCTTCACTTGCTTGTGAGATTACTTGTGAAGCAAAGATCTTCACCATCATCAATTCCTGAATCCAATAGTAATAGGTTTCTGGAAATGTCTGATTCATCTGCCTTCCAAAGACAGCTACAGCAGCTCTTCCATCTTCATGATTCGGGTTTAGATCAAGCCTTCATAGATGCACTCCCTGTGTTCCTTTACAAAGAGATAGTGGGATTAAAAGAGCCATTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGAACTAGACAAGCTAAGATTGCTCCCTTCTTGCAGTCATGCTTTTCACATAGATTGTATAGACACATGGTTGCTTTCTAACTCAACGTGCCCTCTTTGTAGAGGGACCCTTTACTCACCTGGACTTGCCATTGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAAACAGAGGAATCTACAGAGGATGGAAGAAGAATTAGTATCCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTAATGGTGAAAAGAGGGTGTTTTCAATCAGACTTGGGAAGTTTAGGAACTTGAATAGTAATGGAGGAGTGAGAGGCTTGGAGAAAGGAGAAGGAGAAACCAGCAGTAGCAGCAGCTTGGGTGCAAGAAGATGCTATTCAATGGGGTCTTATCAGTATATTGTAGCTGATTCAGAATTGCAAGTGGCATTAAGTACGAGCAATCTAAGAGATTCACAAACTGGGAATTGCTCAGTTGATGATGATAATGCGGAAGGGAAGAAGATTAAGATTGGAAGTAAAAATGAAAGCTTTTCTGTTTCGAAGATCTGGTTATGGTCCAAGAAGGGTCGACAGCCAAGTGGCGCAGACACCCATGTGCTGCGAGCTAATTAA

Homology

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BLAST of CmoCh04G003010 vs. Swiss-Prot
Match: ATL46_ARATH (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-88
Identity = 198/350 (56.57%), Postives = 236/350 (67.43%), Query Frame = 1


Query: 22  QPSSSLAYNSDYQKQSAL------PSSSSSKISPAVLLVIVILALLFFISGLLHLLVRLL 81
           Q   + AY   + K   L      P SS ++ISPAVL VIVILA+LFFISGLLHLLVR L
Sbjct: 10  QKDGNFAYPPPFYKDPILSPPSPPPPSSGNRISPAVLFVIVILAVLFFISGLLHLLVRFL 69

Query: 82  VKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVG 141
           +K    PS+   S SNRF E+S S A QRQLQQLFHL+DSGLDQAFIDALPVF YKEIVG
Sbjct: 70  IKH---PSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVG 129

Query: 142 ----------LKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRG 201
                      +EPFDCAVCLCEFSE DKLRLLP CSHAFH++CIDTWL SNSTCPLCRG
Sbjct: 130 SAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRG 189

Query: 202 TLYSPGLAIENPVYGFEDSEETEES-TEDGRRISIPTAQKAPE-SDINGEKRVFSIRLGK 261
           TL+SPG ++ENP++ F+D  E EE  TE+G       +QK  E  +I  EK V  +RLGK
Sbjct: 190 TLFSPGFSMENPMFDFDDIREDEEGVTENG-------SQKTMEIQEIVVEKGVLPVRLGK 249

Query: 262 FRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSNL----- 321
           F+ L++ G  +G +   G  +SSS+L ARRC+SMGSYQYI+ +SEL+V  +   L     
Sbjct: 250 FKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSELKVPFANDRLPRLKP 309

Query: 322 ---RDSQTGNCSVDDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPSGA 346
                 QTGN S +D+    KKI   +K ESFSVSKIWLW KK +  S A
Sbjct: 310 QDKESEQTGNSSSEDN----KKINTVAKGESFSVSKIWLWPKKDKFSSDA 345

[Close]

BLAST of CmoCh04G003010 vs. Swiss-Prot
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.1e-83
Identity = 184/326 (56.44%), Postives = 222/326 (68.10%), Query Frame = 1


Query: 14  VSPSIAPLQPSSSLAYNSDYQKQSALPSSS-SSKISPAVLLVIVILALLFFISGLLHLLV 73
           +SPS AP    S +  N      S+  SS  +++ISP +L +IV+L+++FFI  +LHLLV
Sbjct: 19  ISPSSAP----SPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLV 78

Query: 74  RLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKE 133
           R  +K++ S  S   + SN+  E SDS  +QRQLQQLFHLHDSGLDQA IDALPVFLYKE
Sbjct: 79  RYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKE 138

Query: 134 IVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGL 193
           I G KEPFDCAVCLCEFSE DKLRLLP+CSHAFHIDCIDTWLLSNSTCPLCRGTL+S G 
Sbjct: 139 IKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGH 198

Query: 194 AIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLGKFRNLNSNGG 253
             E P + F          + G  + +   QK  E++I   KRVFS+RLGKFR+ N    
Sbjct: 199 QFEYPDFNFGFFA----GDDGGGGVRVSPVQKPAENEIG--KRVFSVRLGKFRSSNIVNN 258

Query: 254 VRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSNLRDSQTGNCSVDDDN 313
              +  G GETSSSS L  RRC+SMGSYQYIVA+S+L VAL  +N           ++ +
Sbjct: 259 GEVVVGGGGETSSSS-LDNRRCFSMGSYQYIVAESDLVVALCPNN-------EGLKNNKD 318

Query: 314 AEGKKIKIGSKNESFSVSKIWLWSKK 339
            EGKKI + SK ESFSVSKIW WS K
Sbjct: 319 VEGKKINMRSKGESFSVSKIWQWSNK 326

[Close]

BLAST of CmoCh04G003010 vs. Swiss-Prot
Match: ATL13_ARATH (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2)

HSP 1 Score: 219.9 bits (559), Expect = 4.3e-56
Identity = 160/396 (40.40%), Postives = 216/396 (54.55%), Query Frame = 1


Query: 8   QTRDILVSPSIAPLQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGL 67
           +T    +SPS  P +P  SL  ++++          +SKISP++LL+I+IL+++FFISGL
Sbjct: 16  KTTQNFLSPSSLPQEPPLSLRSSANFDL--------NSKISPSILLIIIILSIIFFISGL 75

Query: 68  LHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPV 127
           LHLLVR L+    +PSS      +R     + +A Q QLQQLFHLHDSG+DQ+FID LPV
Sbjct: 76  LHLLVRFLL----TPSS-----RDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPV 135

Query: 128 FLYKEIVGLKE-PFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGT 187
           F YK I+GLK  PFDCAVCLCEF   DKLRLLP CSHAFH+DCIDTWLLS+STCPLCR +
Sbjct: 136 FHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSS 195

Query: 188 LYSPGLAIENP------------------VYGFEDSEETEESTED--------------- 247
           L S   + ++P                  + G  DS     + +D               
Sbjct: 196 LLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNND 255

Query: 248 --GRRISIPTAQKAPESDINGE--KRV-FSIRLGKFRNLNSNGGVRGLEKGEGETSSSSS 307
               RI      +  + ++ G   K V FS++LGKFRN++   G            +SSS
Sbjct: 256 LGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIGEGT----SSNNNIGNSSS 315

Query: 308 LGARRCYSMGSYQYIV-ADSELQVALS-------------------------TSNLRDSQ 339
           L  RRC+SMGSY+YI+  ++ L+V +S                         T  L+ S 
Sbjct: 316 LDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSG 375

[Close]

BLAST of CmoCh04G003010 vs. Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.4e-53
Identity = 152/357 (42.58%), Postives = 210/357 (58.82%), Query Frame = 1


Query: 16  PSIAPLQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGLLHLLVRLL 75
           P + PL+ ++SL             S+ +SKI+P +LL+I+IL+++FFISGLLH+LV+ L
Sbjct: 21  PPLIPLKSNTSL-------------SNLNSKITPNILLIIIILSIIFFISGLLHILVKFL 80

Query: 76  VKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVG 135
           +    +PS   ES  + F    + +A Q QLQQLF+LHDSG+DQ+ ID LPVF YK IVG
Sbjct: 81  L----TPSR--ESREDYF---DNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVG 140

Query: 136 LK-EPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGLAI 195
           LK  PFDC VCLCEF   DKLRLLP CSHAFH++CIDTWLLS+STCPLCR  L S   + 
Sbjct: 141 LKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSH 200

Query: 196 ENPVYGFEDSEETEESTED--------------------GRRISIPTAQKAPESDING-- 255
            N    +    E+E+S+ D                      RI        P+ D++G  
Sbjct: 201 HNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLD 260

Query: 256 EKRV-FSIRLGKFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIV-ADSELQ 315
           EK V   ++LGKFRN++ + G    +K    + +S ++  RRC SMGSY+YI+  ++ L+
Sbjct: 261 EKVVPLEVKLGKFRNID-HVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLK 320

Query: 316 VALSTSNL--RDSQTGNCSVDDDNAEGKKIKIGSKN----ESFSVSKIWLWSKKGRQ 342
           V +ST  L  +D    + +V  +      +K   K+    ESFS+SKIWL  KK +Q
Sbjct: 321 VHVSTKKLSGKDRVPSHRTVMSECGFDPTVKGIEKSVVERESFSLSKIWLRGKKEKQ 354

[Close]

BLAST of CmoCh04G003010 vs. Swiss-Prot
Match: ATL48_ARATH (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-42
Identity = 127/277 (45.85%), Postives = 156/277 (56.32%), Query Frame = 1


Query: 21  LQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGLLHLLVRLLVKQRS 80
           L P SS A       Q      SSS I   + LVI  LAL+    G+L+L+ + L K  S
Sbjct: 93  LSPKSSSAATLTLMNQK---DPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRKS-S 152

Query: 81  SPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEI-VGLKEP 140
           +   IP  N N  L    S     QLQ LF LHDSGLDQ  IDALPVFLY  + + L++P
Sbjct: 153 TLFPIPHFNYNPDLFSFSSP----QLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQP 212

Query: 141 FDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGLAIENPVY 200
           FDCAVCL EFS+ DKLRLLP CSHAFH+ CIDTWLLSNSTCPLCR +     L+  N  Y
Sbjct: 213 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRS-----LSTSNVCY 272

Query: 201 GFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLGKFRNLNSNGGVRGLEKG 260
              +  ET  +   G        Q+  +   +  KRVFS+RLG+F++ N +   R   K 
Sbjct: 273 ---NHSETLVAPLSGH-------QQVDDGKASLAKRVFSVRLGRFKSTNESQSQRHDVKD 332

Query: 261 EGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTS 297
           E           RRCYSMG+ QY+V D +  VALS+S
Sbjct: 333 EIGVRM-----PRRCYSMGTQQYLVCDQDFVVALSSS 341

[Close]

BLAST of CmoCh04G003010 vs. TrEMBL
Match: A0A0A0KVN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G602200 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 2.2e-144
Identity = 295/356 (82.87%), Postives = 309/356 (86.80%), Query Frame = 1


Query: 6   HPQTRDILVSPSIAPLQPSSSLAYNSDYQKQSALP--SSSSSKISPAVLLVIVILALLFF 65
           HPQTRD  VSPSI+PL  SSSLAY+ DYQK    P  +SSSSKISPAVLLVIVILAL  F
Sbjct: 5   HPQTRDFPVSPSISPLH-SSSLAYDIDYQKLEPTPPSTSSSSKISPAVLLVIVILALFLF 64

Query: 66  ISGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDS-SAFQRQLQQLFHLHDSGLDQAFI 125
           ISGLLHLLVRLLVKQRSS SSI ESNSNRF ++S+S SAFQRQLQQLFHLHDSGLDQAFI
Sbjct: 65  ISGLLHLLVRLLVKQRSSSSSISESNSNRFPDLSESSSAFQRQLQQLFHLHDSGLDQAFI 124

Query: 126 DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPL 185
           DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLP+CSHAFHIDCIDTWLLSNSTCPL
Sbjct: 125 DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPL 184

Query: 186 CRGTLY--SPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIR 245
           CRGTL+  SP LAIENPVYGFEDSEETEESTE+G R  I TAQKAPESDI GEKRVFSIR
Sbjct: 185 CRGTLHIQSPVLAIENPVYGFEDSEETEESTENG-RFGILTAQKAPESDIIGEKRVFSIR 244

Query: 246 LGKFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSN--- 305
           LGKFRNLN NGG+RGLEKGEGET SSSSL ARRCYSMGSYQYIVA+SELQVAL TSN   
Sbjct: 245 LGKFRNLN-NGGLRGLEKGEGET-SSSSLSARRCYSMGSYQYIVAESELQVALHTSNRIS 304

Query: 306 ---------LRDSQTGNCSV--DDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQP 343
                    +RDSQTGNC +  DDD+AE KKI IGSKNESFSVSKIWLWSKK RQP
Sbjct: 305 GGSMRFVKVIRDSQTGNCPIDRDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQP 356

[Close]

BLAST of CmoCh04G003010 vs. TrEMBL
Match: F6HPM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00300 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.3e-112
Identity = 232/364 (63.74%), Postives = 271/364 (74.45%), Query Frame = 1


Query: 8   QTRDILVSPSIAPL-----QPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLF 67
           Q   +L+   ++PL      PS+  +Y+S+YQK+S    SS S+ISPAVL +IVILA++F
Sbjct: 20  QKDGLLIHSPLSPLLYSSSSPSALSSYDSNYQKESTPSPSSGSRISPAVLFIIVILAVIF 79

Query: 68  FISGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFI 127
           FISGLLHLLVR LVK RSS S    S SNR+ E S S AFQRQLQQLFHLHDSGLDQAFI
Sbjct: 80  FISGLLHLLVRFLVKHRSSSSI---SQSNRYQETSSSHAFQRQLQQLFHLHDSGLDQAFI 139

Query: 128 DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPL 187
           DALPVFLYK+IVGLKEPFDCAVCLCEFS+ DKLRLLP CSHAFHI+CIDTWLLSNSTCPL
Sbjct: 140 DALPVFLYKDIVGLKEPFDCAVCLCEFSQEDKLRLLPMCSHAFHIECIDTWLLSNSTCPL 199

Query: 188 CRGTLYSPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLG 247
           CRGTL++PGLA+EN V+ FEDS E    + +G  +S  +AQK PE DI  EKRVFS+RLG
Sbjct: 200 CRGTLFNPGLAMENSVFDFEDSREEGGLSSNGDGVS--SAQKPPEDDIASEKRVFSVRLG 259

Query: 248 KFRNLNSNGGVRGLEKGEGE----TSSSSSLGARRCYSMGSYQYIVADSELQVALSTSNL 307
           KFR LN  GG  G  +GEGE     +S S+L ARRC+SMGS+QY+VA+S+LQVAL  +  
Sbjct: 260 KFRGLNGGGGGGGEGEGEGERGGGETSCSNLDARRCFSMGSFQYVVANSDLQVALCPNRA 319

Query: 308 -------------RDSQTGNCSVDDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPSGA 350
                        R   TGN S D D  EGKKI IGSK+ESFSVSKIWLW KKG+ PS +
Sbjct: 320 DAGSDAVVKLMKGRGGHTGNSSTDGD-VEGKKISIGSKDESFSVSKIWLWPKKGKFPSSS 377

[Close]

BLAST of CmoCh04G003010 vs. TrEMBL
Match: A0A067JP67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21795 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.4e-106
Identity = 222/337 (65.88%), Postives = 252/337 (74.78%), Query Frame = 1


Query: 13  LVSPSIAPLQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGLLHLLV 72
           L S S +P   S S  YNSDYQKQS    SS +KISPA+L +IVILA++FFISGLLHLLV
Sbjct: 22  LHSSSSSPSSSSPSFPYNSDYQKQS----SSGNKISPAILFIIVILAVIFFISGLLHLLV 81

Query: 73  RLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKE 132
           R L+K RSS +S   S SNR+ EMS S AFQRQLQQLFHLHDSGLDQAFIDALPVFLY+E
Sbjct: 82  RFLMKHRSSSTSSSVSESNRYPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYEE 141

Query: 133 IVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGL 192
           I+GLKEPFDCAVCLCEFSE D LRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLY+PGL
Sbjct: 142 IMGLKEPFDCAVCLCEFSEKDNLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYTPGL 201

Query: 193 AIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLGKFRNLNSNGG 252
             ENPV+ FE+  E E+         +   QK  E++    KRVFS+RLGKF+  N+   
Sbjct: 202 PFENPVFDFEEQRE-EDGFSSNSANGVSLGQKPVENERINSKRVFSVRLGKFKGSNN--- 261

Query: 253 VRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVAL------STSNLRDSQTGNC 312
              +E+G GET SSS+L ARRC+SMGSYQYIVAD +LQVAL           R+ Q GN 
Sbjct: 262 -EAVERGIGET-SSSNLDARRCFSMGSYQYIVADLDLQVALLPDRGVKIVKGRNGQNGNS 321

Query: 313 SVDDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPS 344
           SVD D  EGKKI I SK ESFSVSK+W WS+KG+ PS
Sbjct: 322 SVDGD-VEGKKINIRSKGESFSVSKVWQWSRKGKFPS 347

[Close]

BLAST of CmoCh04G003010 vs. TrEMBL
Match: W9RL11_9ROSA (RING-H2 finger protein ATL46 OS=Morus notabilis GN=L484_027810 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.4e-106
Identity = 228/378 (60.32%), Postives = 276/378 (73.02%), Query Frame = 1


Query: 8   QTRDILVSPSIAPLQPSSSLAYNSDYQKQ--SALPSSSSSKISPAVLLVIVILALLFFIS 67
           Q   I  S S++    S S++YN+DYQ Q  S+  SS SSKISPA+L++I+ILA++FFIS
Sbjct: 12  QKNAIFTSSSLSSSSSSPSISYNTDYQNQPTSSPSSSGSSKISPAILIIIIILAVIFFIS 71

Query: 68  GLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDAL 127
           GLLHLLVR L+K RSS S    S SNR+ EMS+SSAFQRQLQQLFHLHDSGLDQAFIDAL
Sbjct: 72  GLLHLLVRFLMKNRSSSSV---SESNRYPEMSESSAFQRQLQQLFHLHDSGLDQAFIDAL 131

Query: 128 PVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRG 187
           PVFLYKEI+GLKEPFDCAVCLCEF+E DKLRLLP CSHAFHIDCIDTWLLSNSTCPLCRG
Sbjct: 132 PVFLYKEIMGLKEPFDCAVCLCEFTEQDKLRLLPLCSHAFHIDCIDTWLLSNSTCPLCRG 191

Query: 188 TLYSPGLAIENPVYGFEDSEETEE----STEDGRRISIPTAQKAPESDINGEKRVFSIRL 247
           TLY+PGL IENPV+ FE    +E+    S   G  + I   QK+ E++I  +KRVFS+RL
Sbjct: 192 TLYTPGLPIENPVFYFEADHPSEDEFGPSGNPGNGV-ISIGQKSSENNI--QKRVFSVRL 251

Query: 248 GKFRNLN--SNGGVRGLE-----------KGEGETSSSSSLGARRCYSMGSYQYIVADSE 307
           GKFR++N  ++GG RG E           +GE  +SSSSSL +RRCYSMGSYQY+VADS+
Sbjct: 252 GKFRSINDGADGGGRGGEREGLGRGERERRGETTSSSSSSLDSRRCYSMGSYQYVVADSD 311

Query: 308 LQVAL------------STSNL-----RDSQTGNCSVDDDNAEGKKIKIGSKNESFSVSK 350
           LQV              +T++L     R   + NC  +D +AE KKI IGSK ESFSVSK
Sbjct: 312 LQVLALRPKRESIIGGNNTNSLRIVKGRSGPSRNCLDNDGDAEAKKINIGSKGESFSVSK 371

[Close]

BLAST of CmoCh04G003010 vs. TrEMBL
Match: B9S4M2_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0993520 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.4e-106
Identity = 225/339 (66.37%), Postives = 258/339 (76.11%), Query Frame = 1


Query: 24  SSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGLLHLLVRLLVKQRSSPS 83
           S SL YNSDYQKQS    SS +KISPA+L +IVILA++FFISGLLHLLVR L+K RSS S
Sbjct: 30  SPSLPYNSDYQKQS----SSGNKISPAILFIIVILAVIFFISGLLHLLVRFLIKHRSSSS 89

Query: 84  SIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCA 143
           S   S SNR+ EMS S AFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEI+GLKEPFDCA
Sbjct: 90  S-SVSESNRYPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIMGLKEPFDCA 149

Query: 144 VCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGLAIENPVYGFED 203
           VCLCE+SE DKLRLLP+CSHAFHIDCIDTWLLSNSTCPLCRGTLY+PGL+ ENPV+ FE+
Sbjct: 150 VCLCEYSEKDKLRLLPACSHAFHIDCIDTWLLSNSTCPLCRGTLYTPGLSFENPVFDFEE 209

Query: 204 SEETEE-STEDGRRISIPTAQKAPESDINGEKRVFSIRLGKFRNLNSNGGVRGLEKGEGE 263
           S E E  S+  G  IS+   QK  E++    KRVFS+RLGKF++ N    V      EGE
Sbjct: 210 SREEEGLSSNVGNGISV--GQKPAENERINSKRVFSVRLGKFKSSN----VEVDRVVEGE 269

Query: 264 TSSSSSLGARRCYSMGSYQYIVADSELQVALSTSN-----------LRDSQTGNCSVDD- 323
           TSSS+ L ARRC+SMGSYQY+VAD  LQVAL                ++ Q GN S +D 
Sbjct: 270 TSSSN-LDARRCFSMGSYQYVVADLNLQVALCPGRNVGTGSFKLVKSKNGQNGNTSSNDI 329

Query: 324 DNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPSGADTHV 350
            +AEGKKI I SK ESFSVSKIW WS+KG+ PS +DT++
Sbjct: 330 GDAEGKKINIRSKGESFSVSKIWQWSRKGKLPSSSDTYM 356

[Close]

BLAST of CmoCh04G003010 vs. TAIR10
Match: AT5G40250.1 (AT5G40250.1 RING/U-box superfamily protein)

HSP 1 Score: 327.8 bits (839), Expect = 8.3e-90
Identity = 198/350 (56.57%), Postives = 236/350 (67.43%), Query Frame = 1


Query: 22  QPSSSLAYNSDYQKQSAL------PSSSSSKISPAVLLVIVILALLFFISGLLHLLVRLL 81
           Q   + AY   + K   L      P SS ++ISPAVL VIVILA+LFFISGLLHLLVR L
Sbjct: 10  QKDGNFAYPPPFYKDPILSPPSPPPPSSGNRISPAVLFVIVILAVLFFISGLLHLLVRFL 69

Query: 82  VKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVG 141
           +K    PS+   S SNRF E+S S A QRQLQQLFHL+DSGLDQAFIDALPVF YKEIVG
Sbjct: 70  IKH---PSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVG 129

Query: 142 ----------LKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRG 201
                      +EPFDCAVCLCEFSE DKLRLLP CSHAFH++CIDTWL SNSTCPLCRG
Sbjct: 130 SAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRG 189

Query: 202 TLYSPGLAIENPVYGFEDSEETEES-TEDGRRISIPTAQKAPE-SDINGEKRVFSIRLGK 261
           TL+SPG ++ENP++ F+D  E EE  TE+G       +QK  E  +I  EK V  +RLGK
Sbjct: 190 TLFSPGFSMENPMFDFDDIREDEEGVTENG-------SQKTMEIQEIVVEKGVLPVRLGK 249

Query: 262 FRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSNL----- 321
           F+ L++ G  +G +   G  +SSS+L ARRC+SMGSYQYI+ +SEL+V  +   L     
Sbjct: 250 FKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSELKVPFANDRLPRLKP 309

Query: 322 ---RDSQTGNCSVDDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPSGA 346
                 QTGN S +D+    KKI   +K ESFSVSKIWLW KK +  S A
Sbjct: 310 QDKESEQTGNSSSEDN----KKINTVAKGESFSVSKIWLWPKKDKFSSDA 345

[Close]

BLAST of CmoCh04G003010 vs. TAIR10
Match: AT1G23980.1 (AT1G23980.1 RING/U-box superfamily protein)

HSP 1 Score: 309.7 bits (792), Expect = 2.3e-84
Identity = 184/326 (56.44%), Postives = 222/326 (68.10%), Query Frame = 1


Query: 14  VSPSIAPLQPSSSLAYNSDYQKQSALPSSS-SSKISPAVLLVIVILALLFFISGLLHLLV 73
           +SPS AP    S +  N      S+  SS  +++ISP +L +IV+L+++FFI  +LHLLV
Sbjct: 19  ISPSSAP----SPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLV 78

Query: 74  RLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKE 133
           R  +K++ S  S   + SN+  E SDS  +QRQLQQLFHLHDSGLDQA IDALPVFLYKE
Sbjct: 79  RYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKE 138

Query: 134 IVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGL 193
           I G KEPFDCAVCLCEFSE DKLRLLP+CSHAFHIDCIDTWLLSNSTCPLCRGTL+S G 
Sbjct: 139 IKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGH 198

Query: 194 AIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLGKFRNLNSNGG 253
             E P + F          + G  + +   QK  E++I   KRVFS+RLGKFR+ N    
Sbjct: 199 QFEYPDFNFGFFA----GDDGGGGVRVSPVQKPAENEIG--KRVFSVRLGKFRSSNIVNN 258

Query: 254 VRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSNLRDSQTGNCSVDDDN 313
              +  G GETSSSS L  RRC+SMGSYQYIVA+S+L VAL  +N           ++ +
Sbjct: 259 GEVVVGGGGETSSSS-LDNRRCFSMGSYQYIVAESDLVVALCPNN-------EGLKNNKD 318

Query: 314 AEGKKIKIGSKNESFSVSKIWLWSKK 339
            EGKKI + SK ESFSVSKIW WS K
Sbjct: 319 VEGKKINMRSKGESFSVSKIWQWSNK 326

[Close]

BLAST of CmoCh04G003010 vs. TAIR10
Match: AT4G30400.1 (AT4G30400.1 RING/U-box superfamily protein)

HSP 1 Score: 219.9 bits (559), Expect = 2.4e-57
Identity = 160/396 (40.40%), Postives = 216/396 (54.55%), Query Frame = 1


Query: 8   QTRDILVSPSIAPLQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGL 67
           +T    +SPS  P +P  SL  ++++          +SKISP++LL+I+IL+++FFISGL
Sbjct: 16  KTTQNFLSPSSLPQEPPLSLRSSANFDL--------NSKISPSILLIIIILSIIFFISGL 75

Query: 68  LHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPV 127
           LHLLVR L+    +PSS      +R     + +A Q QLQQLFHLHDSG+DQ+FID LPV
Sbjct: 76  LHLLVRFLL----TPSS-----RDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPV 135

Query: 128 FLYKEIVGLKE-PFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGT 187
           F YK I+GLK  PFDCAVCLCEF   DKLRLLP CSHAFH+DCIDTWLLS+STCPLCR +
Sbjct: 136 FHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSS 195

Query: 188 LYSPGLAIENP------------------VYGFEDSEETEESTED--------------- 247
           L S   + ++P                  + G  DS     + +D               
Sbjct: 196 LLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNND 255

Query: 248 --GRRISIPTAQKAPESDINGE--KRV-FSIRLGKFRNLNSNGGVRGLEKGEGETSSSSS 307
               RI      +  + ++ G   K V FS++LGKFRN++   G            +SSS
Sbjct: 256 LGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIGEGT----SSNNNIGNSSS 315

Query: 308 LGARRCYSMGSYQYIV-ADSELQVALS-------------------------TSNLRDSQ 339
           L  RRC+SMGSY+YI+  ++ L+V +S                         T  L+ S 
Sbjct: 316 LDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSG 375

[Close]

BLAST of CmoCh04G003010 vs. TAIR10
Match: AT2G18650.1 (AT2G18650.1 RING/U-box superfamily protein)

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-54
Identity = 152/357 (42.58%), Postives = 210/357 (58.82%), Query Frame = 1


Query: 16  PSIAPLQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGLLHLLVRLL 75
           P + PL+ ++SL             S+ +SKI+P +LL+I+IL+++FFISGLLH+LV+ L
Sbjct: 21  PPLIPLKSNTSL-------------SNLNSKITPNILLIIIILSIIFFISGLLHILVKFL 80

Query: 76  VKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVG 135
           +    +PS   ES  + F    + +A Q QLQQLF+LHDSG+DQ+ ID LPVF YK IVG
Sbjct: 81  L----TPSR--ESREDYF---DNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVG 140

Query: 136 LK-EPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGLAI 195
           LK  PFDC VCLCEF   DKLRLLP CSHAFH++CIDTWLLS+STCPLCR  L S   + 
Sbjct: 141 LKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSH 200

Query: 196 ENPVYGFEDSEETEESTED--------------------GRRISIPTAQKAPESDING-- 255
            N    +    E+E+S+ D                      RI        P+ D++G  
Sbjct: 201 HNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLD 260

Query: 256 EKRV-FSIRLGKFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIV-ADSELQ 315
           EK V   ++LGKFRN++ + G    +K    + +S ++  RRC SMGSY+YI+  ++ L+
Sbjct: 261 EKVVPLEVKLGKFRNID-HVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLK 320

Query: 316 VALSTSNL--RDSQTGNCSVDDDNAEGKKIKIGSKN----ESFSVSKIWLWSKKGRQ 342
           V +ST  L  +D    + +V  +      +K   K+    ESFS+SKIWL  KK +Q
Sbjct: 321 VHVSTKKLSGKDRVPSHRTVMSECGFDPTVKGIEKSVVERESFSLSKIWLRGKKEKQ 354

[Close]

BLAST of CmoCh04G003010 vs. TAIR10
Match: AT3G48030.1 (AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 174.9 bits (442), Expect = 9.0e-44
Identity = 127/277 (45.85%), Postives = 156/277 (56.32%), Query Frame = 1


Query: 21  LQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLFFISGLLHLLVRLLVKQRS 80
           L P SS A       Q      SSS I   + LVI  LAL+    G+L+L+ + L K  S
Sbjct: 93  LSPKSSSAATLTLMNQK---DPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRKS-S 152

Query: 81  SPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEI-VGLKEP 140
           +   IP  N N  L    S     QLQ LF LHDSGLDQ  IDALPVFLY  + + L++P
Sbjct: 153 TLFPIPHFNYNPDLFSFSSP----QLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQP 212

Query: 141 FDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLYSPGLAIENPVY 200
           FDCAVCL EFS+ DKLRLLP CSHAFH+ CIDTWLLSNSTCPLCR +     L+  N  Y
Sbjct: 213 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRS-----LSTSNVCY 272

Query: 201 GFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLGKFRNLNSNGGVRGLEKG 260
              +  ET  +   G        Q+  +   +  KRVFS+RLG+F++ N +   R   K 
Sbjct: 273 ---NHSETLVAPLSGH-------QQVDDGKASLAKRVFSVRLGRFKSTNESQSQRHDVKD 332

Query: 261 EGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTS 297
           E           RRCYSMG+ QY+V D +  VALS+S
Sbjct: 333 EIGVRM-----PRRCYSMGTQQYLVCDQDFVVALSSS 341

[Close]

BLAST of CmoCh04G003010 vs. NCBI nr
Match: gi|659090852|ref|XP_008446237.1| (PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 3.4e-146
Identity = 298/358 (83.24%), Postives = 312/358 (87.15%), Query Frame = 1


Query: 4   VVHPQTRDILVSPSIAPLQPSSSLAYNSDYQKQSALP--SSSSSKISPAVLLVIVILALL 63
           ++HPQTRD LVSPSI+PL  SSSLAY+ DYQK    P  +SSSSKISPAVLLVIVILAL 
Sbjct: 3   LIHPQTRDFLVSPSISPLH-SSSLAYDIDYQKLEPTPPSTSSSSKISPAVLLVIVILALF 62

Query: 64  FFISGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSS-AFQRQLQQLFHLHDSGLDQA 123
            FISGLLHLLVRLLVKQRSS SSI ESNSNRF E+S+SS AFQRQLQQLFHLHDSGLDQA
Sbjct: 63  LFISGLLHLLVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQA 122

Query: 124 FIDALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTC 183
           FIDALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTC
Sbjct: 123 FIDALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTC 182

Query: 184 PLCRGTLY--SPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFS 243
           PLCRGTL+  SP LAIENPVYGFEDSEETEESTE+GR   I TAQKAPESDI GEKRVFS
Sbjct: 183 PLCRGTLHIQSPVLAIENPVYGFEDSEETEESTENGR-FGILTAQKAPESDIIGEKRVFS 242

Query: 244 IRLGKFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSN- 303
           IRLGKFRNLN NGG+RGLEKGEGETSSSS L ARRCYSMGSYQYIVA+SELQVAL TSN 
Sbjct: 243 IRLGKFRNLN-NGGLRGLEKGEGETSSSS-LNARRCYSMGSYQYIVAESELQVALHTSNR 302

Query: 304 -----------LRDSQTGNCSV--DDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQP 343
                      +RDSQTGNC +  DDD+AE KKI IGSKNESFSVSKIWLWSKK RQP
Sbjct: 303 ISGGSMRFVKVIRDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQP 356

[Close]

BLAST of CmoCh04G003010 vs. NCBI nr
Match: gi|449435388|ref|XP_004135477.1| (PREDICTED: RING-H2 finger protein ATL46 [Cucumis sativus])

HSP 1 Score: 520.0 bits (1338), Expect = 3.2e-144
Identity = 295/356 (82.87%), Postives = 309/356 (86.80%), Query Frame = 1


Query: 6   HPQTRDILVSPSIAPLQPSSSLAYNSDYQKQSALP--SSSSSKISPAVLLVIVILALLFF 65
           HPQTRD  VSPSI+PL  SSSLAY+ DYQK    P  +SSSSKISPAVLLVIVILAL  F
Sbjct: 5   HPQTRDFPVSPSISPLH-SSSLAYDIDYQKLEPTPPSTSSSSKISPAVLLVIVILALFLF 64

Query: 66  ISGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDS-SAFQRQLQQLFHLHDSGLDQAFI 125
           ISGLLHLLVRLLVKQRSS SSI ESNSNRF ++S+S SAFQRQLQQLFHLHDSGLDQAFI
Sbjct: 65  ISGLLHLLVRLLVKQRSSSSSISESNSNRFPDLSESSSAFQRQLQQLFHLHDSGLDQAFI 124

Query: 126 DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPL 185
           DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLP+CSHAFHIDCIDTWLLSNSTCPL
Sbjct: 125 DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPL 184

Query: 186 CRGTLY--SPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIR 245
           CRGTL+  SP LAIENPVYGFEDSEETEESTE+G R  I TAQKAPESDI GEKRVFSIR
Sbjct: 185 CRGTLHIQSPVLAIENPVYGFEDSEETEESTENG-RFGILTAQKAPESDIIGEKRVFSIR 244

Query: 246 LGKFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSN--- 305
           LGKFRNLN NGG+RGLEKGEGET SSSSL ARRCYSMGSYQYIVA+SELQVAL TSN   
Sbjct: 245 LGKFRNLN-NGGLRGLEKGEGET-SSSSLSARRCYSMGSYQYIVAESELQVALHTSNRIS 304

Query: 306 ---------LRDSQTGNCSV--DDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQP 343
                    +RDSQTGNC +  DDD+AE KKI IGSKNESFSVSKIWLWSKK RQP
Sbjct: 305 GGSMRFVKVIRDSQTGNCPIDRDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQP 356

[Close]

BLAST of CmoCh04G003010 vs. NCBI nr
Match: gi|1009153779|ref|XP_015894811.1| (PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL47-like [Ziziphus jujuba])

HSP 1 Score: 412.1 bits (1058), Expect = 9.5e-112
Identity = 238/368 (64.67%), Postives = 277/368 (75.27%), Query Frame = 1


Query: 13  LVSPSIAPLQPSSSLAYNS-----DYQKQ---SALPSSSSSKISPAVLLVIVILALLFFI 72
           L S +++PL  SSSL+ +S     DYQKQ   S+L SSS SKISPA+L +IVILA++FFI
Sbjct: 25  LTSSAVSPLL-SSSLSASSPLQPXDYQKQPTMSSLSSSSGSKISPAILFIIVILAVIFFI 84

Query: 73  SGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDA 132
           SGLLHLLVR L+K RSSP S     SNR+ +MS S A QRQLQQLFHLHDSGLDQAFIDA
Sbjct: 85  SGLLHLLVRFLIKHRSSPVS----ESNRYPDMSGSDAVQRQLQQLFHLHDSGLDQAFIDA 144

Query: 133 LPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCR 192
           LPVFLYKEI+GLKEPFDCAVCLCEFSE +KLRLLP CSHAFHI+CIDTWLLSNSTCPLCR
Sbjct: 145 LPVFLYKEIMGLKEPFDCAVCLCEFSEQEKLRLLPLCSHAFHINCIDTWLLSNSTCPLCR 204

Query: 193 GTLYSPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLGKF 252
           GTLYSPGLAIE+P++ FED  + + S  +G  I++ ++QK  ES+I G+KRVFS+RLGKF
Sbjct: 205 GTLYSPGLAIESPIFDFEDPRDEDGSLGNG-GIAVVSSQKPAESEIVGQKRVFSVRLGKF 264

Query: 253 RNLNSN------GGVRGLEKGEGE-TSSSSSLGARRCYSMGSYQYIVADSELQVALSTSN 312
           R++N        GG  G E+G GE  +SSS+L ARRCYSMGSYQY+VADSELQVAL    
Sbjct: 265 RSINDGGEGGEVGGQEGDERGRGEGETSSSNLDARRCYSMGSYQYVVADSELQVALRPKR 324

Query: 313 L----------------RDSQTGNCSVDDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQ 350
                            R    GN  VD D AEGKKI IGSK ESFSVSKIWLWSKKG+ 
Sbjct: 325 KGGGGGGGGDSVRLVKGRSGPNGNSIVDGD-AEGKKINIGSKGESFSVSKIWLWSKKGKF 384

[Close]

BLAST of CmoCh04G003010 vs. NCBI nr
Match: gi|731374585|ref|XP_002265075.3| (PREDICTED: RING-H2 finger protein ATL46 isoform X1 [Vitis vinifera])

HSP 1 Score: 407.5 bits (1046), Expect = 2.3e-110
Identity = 233/374 (62.30%), Postives = 271/374 (72.46%), Query Frame = 1


Query: 8   QTRDILVSPSIAPL-----QPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILALLF 67
           Q   +L+   ++PL      PS+  +Y+S+YQK+S    SS S+ISPAVL +IVILA++F
Sbjct: 20  QKDGLLIHSPLSPLLYSSSSPSALSSYDSNYQKESTPSPSSGSRISPAVLFIIVILAVIF 79

Query: 68  FISGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFI 127
           FISGLLHLLVR LVK RSS S    S SNR+ E S S AFQRQLQQLFHLHDSGLDQAFI
Sbjct: 80  FISGLLHLLVRFLVKHRSSSSI---SQSNRYQETSSSHAFQRQLQQLFHLHDSGLDQAFI 139

Query: 128 DALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPL 187
           DALPVFLYK+IVGLKEPFDCAVCLCEFS+ DKLRLLP CSHAFHI+CIDTWLLSNSTCPL
Sbjct: 140 DALPVFLYKDIVGLKEPFDCAVCLCEFSQEDKLRLLPMCSHAFHIECIDTWLLSNSTCPL 199

Query: 188 CRGTLYSPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLG 247
           CRGTL++PGLA+EN V+ FEDS E    + +G  +S  +AQK PE DI  EKRVFS+RLG
Sbjct: 200 CRGTLFNPGLAMENSVFDFEDSREEGGLSSNGDGVS--SAQKPPEDDIASEKRVFSVRLG 259

Query: 248 KFRNLNSNGGVRG--------------LEKGEGETSSSSSLGARRCYSMGSYQYIVADSE 307
           KFR LN  GG  G               E+G GET S S+L ARRC+SMGS+QY+VA+S+
Sbjct: 260 KFRGLNGGGGGGGGGGGGGGGGEGEGEGERGGGET-SCSNLDARRCFSMGSFQYVVANSD 319

Query: 308 LQVALSTSNL-------------RDSQTGNCSVDDDNAEGKKIKIGSKNESFSVSKIWLW 350
           LQVAL  +               R   TGN S D D  EGKKI IGSK+ESFSVSKIWLW
Sbjct: 320 LQVALCPNRADAGSDAVVKLMKGRGGHTGNSSTDGD-VEGKKISIGSKDESFSVSKIWLW 379

[Close]

BLAST of CmoCh04G003010 vs. NCBI nr
Match: gi|719964718|ref|XP_010254259.1| (PREDICTED: RING-H2 finger protein ATL46-like [Nelumbo nucifera])

HSP 1 Score: 396.4 bits (1017), Expect = 5.4e-107
Identity = 227/360 (63.06%), Postives = 259/360 (71.94%), Query Frame = 1


Query: 1   MSFVVHPQTRDILVSP-SIAPLQPSSSLAYNSDYQKQSALPSSSSSKISPAVLLVIVILA 60
           +  V HP     L+SP S +P    SS   N++YQK+S   SS+SS+ISPA L +IVILA
Sbjct: 12  VGLVTHPPPLAPLLSPISASPSSSFSSPYNNNNYQKESTPSSSTSSRISPAALFIIVILA 71

Query: 61  LLFFISGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQ 120
           ++FFISGLLHLLVR L+KQ   PSS   S SNR+ E+S S A QRQLQQLFHLHDSGLDQ
Sbjct: 72  VIFFISGLLHLLVRFLIKQ---PSSSSTSQSNRYPEISGSDALQRQLQQLFHLHDSGLDQ 131

Query: 121 AFIDALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNST 180
           AFIDALPVFLYKEI+GLKEPFDCAVCLCEFSE DKLRLLP CSHAFHI+CIDTWLLSNST
Sbjct: 132 AFIDALPVFLYKEIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHINCIDTWLLSNST 191

Query: 181 CPLCRGTLYSPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSI 240
           CPLCRGTLYSP LAIENPV+ F+D  E      DG      + +     +I  EKRVF +
Sbjct: 192 CPLCRGTLYSPSLAIENPVFDFDDLREESGCPGDGEDGFASSQKPVEMEEIPTEKRVFPV 251

Query: 241 RLGKFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSNL- 300
           RLGKFRNLNS G   G  +GE   +SSS+L ARRCYSMGS+QY+V DS LQVAL      
Sbjct: 252 RLGKFRNLNSGG--EGERRGE---TSSSNLDARRCYSMGSFQYVVGDSNLQVALRPDRNG 311

Query: 301 ---------RDSQTGNCSVDDDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPSGADTHV 350
                    R +Q GN S+D D  EGKK+   SK ESFSVSKIWLWSKKG+ PS +D HV
Sbjct: 312 AGAAKLVKGRAAQNGNSSIDAD-LEGKKLSGRSKGESFSVSKIWLWSKKGKFPSSSDAHV 362

The following BLAST results are available for this feature:

BLAST of CmoCh04G003010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL46_ARATH	1.5e-88	56.57	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1	[more]
ATL47_ARATH	4.1e-83	56.44	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1	[more]
ATL13_ARATH	4.3e-56	40.40	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2	[more]
ATL49_ARATH	3.4e-53	42.58	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1	[more]
ATL48_ARATH	1.6e-42	45.85	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=1 SV=2	[more]

BLAST of CmoCh04G003010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVN9_CUCSA	2.2e-144	82.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G602200 PE=4 SV=1	[more]
F6HPM6_VITVI	2.3e-112	63.74	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g00300 PE=4 SV=...	[more]
A0A067JP67_JATCU	2.4e-106	65.88	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21795 PE=4 SV=1	[more]
W9RL11_9ROSA	5.4e-106	60.32	RING-H2 finger protein ATL46 OS=Morus notabilis GN=L484_027810 PE=4 SV=1	[more]
B9S4M2_RICCO	5.4e-106	66.37	Ring finger protein, putative OS=Ricinus communis GN=RCOM_0993520 PE=4 SV=1	[more]

BLAST of CmoCh04G003010 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G40250.1	8.3e-90	56.57	RING/U-box superfamily protein	[more]
AT1G23980.1	2.3e-84	56.44	RING/U-box superfamily protein	[more]
AT4G30400.1	2.4e-57	40.40	RING/U-box superfamily protein	[more]
AT2G18650.1	1.9e-54	42.58	RING/U-box superfamily protein	[more]
AT3G48030.1	9.0e-44	45.85	hypoxia-responsive family protein / zinc finger (C3HC4-type RING fin...	[more]

BLAST of CmoCh04G003010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090852\|ref\|XP_008446237.1\|	3.4e-146	83.24	PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo]	[more]
gi\|449435388\|ref\|XP_004135477.1\|	3.2e-144	82.87	PREDICTED: RING-H2 finger protein ATL46 [Cucumis sativus]	[more]
gi\|1009153779\|ref\|XP_015894811.1\|	9.5e-112	64.67	PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL47-like [Ziziphus juju...	[more]
gi\|731374585\|ref\|XP_002265075.3\|	2.3e-110	62.30	PREDICTED: RING-H2 finger protein ATL46 isoform X1 [Vitis vinifera]	[more]
gi\|719964718\|ref\|XP_010254259.1\|	5.4e-107	63.06	PREDICTED: RING-H2 finger protein ATL46-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003010.1	CmoCh04G003010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 141..184 score: 8.6
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 142..183 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 142..184 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 138..187 score: 1.9
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 10..209 score: 2.5
None	No IPR available	PANTHER	PTHR14155:SF128	RING-H2 FINGER PROTEIN ATL46	coord: 10..209 score: 2.5
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 121..190 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G003010	Cucsa.285900	Cucumber (Gy14) v1	cgycmoB0798
CmoCh04G003010	CmaCh04G002890	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G003010	Cla010103	Watermelon (97103) v1	cmowmB700
CmoCh04G003010	Csa5G602200	Cucumber (Chinese Long) v2	cmocuB718
CmoCh04G003010	MELO3C012012	Melon (DHL92) v3.5.1	cmomeB647
CmoCh04G003010	ClCG05G025170	Watermelon (Charleston Gray)	cmowcgB661
CmoCh04G003010	CSPI05G22830	Wild cucumber (PI 183967)	cmocpiB726
CmoCh04G003010	Lsi04G005290	Bottle gourd (USVL1VR-Ls)	cmolsiB674
CmoCh04G003010	MELO3C012012.2	Melon (DHL92) v3.6.1	cmomedB737
CmoCh04G003010	CsaV3_5G031720	Cucumber (Chinese Long) v3	cmocucB0851
CmoCh04G003010	Cla97C05G107300	Watermelon (97103) v2	cmowmbB736
CmoCh04G003010	CsGy5G022360	Cucumber (Gy14) v2	cgybcmoB630

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G003010	Silver-seed gourd	carcmoB1148
CmoCh04G003010	Wax gourd	cmowgoB0895
CmoCh04G003010	Cucurbita moschata (Rifu)	cmocmoB465
CmoCh04G003010	Cucurbita maxima (Rimu)	cmacmoB732
CmoCh04G003010	Cucurbita pepo (Zucchini)	cmocpeB673