CmoCh04G002860 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G002860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	LINE-type retrotransposon LIb DNA, complete sequence, Insertion at the S14 site
Location	Cmo_Chr04 : 1441165 .. 1443057 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTTCCATCAAACTGTTCGCAATCCGACCTCCAACCCACCGGCGCCGGCGACGACGAAGCAGCCGCAAGAACCTACCTGAGCAGAAAGAAGGCTAAGAGACCACTGATGGCCTCCTCATCGGACTTAGAATCTCATCGCTCAACCACCGGCGCAACTGTCTGCAATCTCTCACCCTCACAAACAGCTCGGATCACTCGACAGTTCGATCACTCCCTCATAGCTTGGGTTTTTGGACAAGACATCCGCCCACGGCAACTCGCCGGTCGCCTTCGCCGTCATCTTCATCTCACCCAAGACGTGGAGGTTTTCGAGCTTGGTCTCGGCTACTTCGTGCTCAAATTCTCTGAGACCGACTATCTTGCCCTAGAAGACTTACCCTGGTCAATCCCTAATCTCTGCATCTACGCCTTTCGATGGACTCCCGATTTCAAACCCTCCGAAGCCATCAATTCCTCTGTTGATGTCTGGATTCGCCTCCGTGAGCTCTCCATCGAATACTACGATGAAGAGATTCTTCGACAAATAGCGGCGACCATCGGCGGTGTTCTTGTTAAGTTCGATCCAGTAACGAAAAATCGCAGGAAATGTAAGTTCGCTCGTATCTGTATTAGGGTAAATTTGTGCGATCCCCTTCCATCTATGATCAAACTTGGTAGAATTCAACAGAAAATTGAGTATGAGGGTTTGGATTTGTTGTGCCCTAACTGTAGACTTGTTCATGATTTGAAACAAAATTGTTTGAATTCGGGTAATCCTCCTGGTTCTTCTGGATTAGATACCCTAGGAGATAGACCCACCCACCACCACAGAACTCGTCCTCTACTGGAATTAGGGTCGAGTTCTAGCTCGAAGCAGCCATTGATTCCTTCTGTATCTTCACCAGCATCGGCTTGTGGATCAAGATTCCAAGTTCTTGAAAATGACCTGTTGCTTGATGAATGTGAAAAGGCAAGTCCAAGTATAAGAATTAGTTCTCCTCATGTTCATGTGAAGGATAAAGCAGCTGCAAAGCCCAAGGAGTTATGTGGAGATCCTGTTCGATCATTGCCCAAATTGCCGAAAAAACCTTCTACAAAAACCAACAAAGCTCCTGAGTTAGAACTTGTAGCCCCTGCTGTTGTTGAACATCAGTTCAAGCCTGCAAAAACCAGCAACCCCACCTCGATTGCAGACCATAATAATCAACCATGTCTTGTTCCAAAGGCGACCCTTGACTTCATTTCGGCTGTGATTCGACGCTCGACGAAAGAGAAAGAGATGCCCGACATACCATCTAAGGAGATCATAGTCGATGGCTGCCCCATTGTTCACACAATCAACACAAAGAAGATCAGAAGCTTTAAAATGAATTTGTCAGCATTGCAAACCAACTCCATATCGAACCGAAATCATTATACAATGGACACTCTTCCAACTGCAAGATGTGTAGACGAAGATGGAGATGGTTCGAAGACGGTATCGGGATCAGAATCATGTTCTAAGAAGATGTTGTGCTGGAAGTTTCATGGGACGGACAATGCTAATCTAATGCAAGCATTGAAAGATCTGATTCAGCTACACGAGCCGTCCATTGTGCTGATCTTTGGCACCAAAATCAGTGGTGCTGAAGCTGAACTCGTCGTGCGGGAGCTCTCGTTCTGCGGTTCGTACTGCAGAAAGCCTGATGGTTACAATGGTGGTGTTTGGCTGTTATTGTCCCGGCAAGATGTTCATATTGAAGTCGATTCATACAGCCCACAACAGGTTTCTGCATCAGTATATTTTGGTTCCAATACCAATAGACCTGCGTTTTGTCCTCCGAACGTCGATACCGAAACATCGTCGGGACCATGGGGATCGACTTTCTTCTATACTTCGACGAACTGGATGAGTTCAGTGGCATACTGA

mRNA sequence

ATGACAGTTCCATCAAACTGTTCGCAATCCGACCTCCAACCCACCGGCGCCGGCGACGACGAAGCAGCCGCAAGAACCTACCTGAGCAGAAAGAAGGCTAAGAGACCACTGATGGCCTCCTCATCGGACTTAGAATCTCATCGCTCAACCACCGGCGCAACTGTCTGCAATCTCTCACCCTCACAAACAGCTCGGATCACTCGACAGTTCGATCACTCCCTCATAGCTTGGGTTTTTGGACAAGACATCCGCCCACGGCAACTCGCCGGTCGCCTTCGCCGTCATCTTCATCTCACCCAAGACGTGGAGGTTTTCGAGCTTGGTCTCGGCTACTTCGTGCTCAAATTCTCTGAGACCGACTATCTTGCCCTAGAAGACTTACCCTGGTCAATCCCTAATCTCTGCATCTACGCCTTTCGATGGACTCCCGATTTCAAACCCTCCGAAGCCATCAATTCCTCTGTTGATGTCTGGATTCGCCTCCGTGAGCTCTCCATCGAATACTACGATGAAGAGATTCTTCGACAAATAGCGGCGACCATCGGCGGTGTTCTTGTTAAGTTCGATCCAGTAACGAAAAATCGCAGGAAATGTAAGTTCGCTCGTATCTGTATTAGGGTAAATTTGTGCGATCCCCTTCCATCTATGATCAAACTTGGTAGAATTCAACAGAAAATTGAGTATGAGGGTTTGGATTTGTTGTGCCCTAACTGTAGACTTGTTCATGATTTGAAACAAAATTGTTTGAATTCGGGTAATCCTCCTGGTTCTTCTGGATTAGATACCCTAGGAGATAGACCCACCCACCACCACAGAACTCGTCCTCTACTGGAATTAGGGTCGAGTTCTAGCTCGAAGCAGCCATTGATTCCTTCTGTATCTTCACCAGCATCGGCTTGTGGATCAAGATTCCAAGTTCTTGAAAATGACCTGTTGCTTGATGAATGTGAAAAGGCAAGTCCAAGTATAAGAATTAGTTCTCCTCATGTTCATGTGAAGGATAAAGCAGCTGCAAAGCCCAAGGAGTTATGTGGAGATCCTGTTCGATCATTGCCCAAATTGCCGAAAAAACCTTCTACAAAAACCAACAAAGCTCCTGAGTTAGAACTTGTAGCCCCTGCTGTTGTTGAACATCAGTTCAAGCCTGCAAAAACCAGCAACCCCACCTCGATTGCAGACCATAATAATCAACCATGTCTTGTTCCAAAGGCGACCCTTGACTTCATTTCGGCTGTGATTCGACGCTCGACGAAAGAGAAAGAGATGCCCGACATACCATCTAAGGAGATCATAGTCGATGGCTGCCCCATTGTTCACACAATCAACACAAAGAAGATCAGAAGCTTTAAAATGAATTTGTCAGCATTGCAAACCAACTCCATATCGAACCGAAATCATTATACAATGGACACTCTTCCAACTGCAAGATGTGTAGACGAAGATGGAGATGGTTCGAAGACGGTATCGGGATCAGAATCATGTTCTAAGAAGATGTTGTGCTGGAAGTTTCATGGGACGGACAATGCTAATCTAATGCAAGCATTGAAAGATCTGATTCAGCTACACGAGCCGTCCATTGTGCTGATCTTTGGCACCAAAATCAGTGGTGCTGAAGCTGAACTCGTCGTGCGGGAGCTCTCGTTCTGCGGTTCGTACTGCAGAAAGCCTGATGGTTACAATGGTGGTGTTTGGCTGTTATTGTCCCGGCAAGATGTTCATATTGAAGTCGATTCATACAGCCCACAACAGGTTTCTGCATCAGTATATTTTGGTTCCAATACCAATAGACCTGCGTTTTGTCCTCCGAACGTCGATACCGAAACATCGTCGGGACCATGGGGATCGACTTTCTTCTATACTTCGACGAACTGGATGAGTTCAGTGGCATACTGA

Coding sequence (CDS)

ATGACAGTTCCATCAAACTGTTCGCAATCCGACCTCCAACCCACCGGCGCCGGCGACGACGAAGCAGCCGCAAGAACCTACCTGAGCAGAAAGAAGGCTAAGAGACCACTGATGGCCTCCTCATCGGACTTAGAATCTCATCGCTCAACCACCGGCGCAACTGTCTGCAATCTCTCACCCTCACAAACAGCTCGGATCACTCGACAGTTCGATCACTCCCTCATAGCTTGGGTTTTTGGACAAGACATCCGCCCACGGCAACTCGCCGGTCGCCTTCGCCGTCATCTTCATCTCACCCAAGACGTGGAGGTTTTCGAGCTTGGTCTCGGCTACTTCGTGCTCAAATTCTCTGAGACCGACTATCTTGCCCTAGAAGACTTACCCTGGTCAATCCCTAATCTCTGCATCTACGCCTTTCGATGGACTCCCGATTTCAAACCCTCCGAAGCCATCAATTCCTCTGTTGATGTCTGGATTCGCCTCCGTGAGCTCTCCATCGAATACTACGATGAAGAGATTCTTCGACAAATAGCGGCGACCATCGGCGGTGTTCTTGTTAAGTTCGATCCAGTAACGAAAAATCGCAGGAAATGTAAGTTCGCTCGTATCTGTATTAGGGTAAATTTGTGCGATCCCCTTCCATCTATGATCAAACTTGGTAGAATTCAACAGAAAATTGAGTATGAGGGTTTGGATTTGTTGTGCCCTAACTGTAGACTTGTTCATGATTTGAAACAAAATTGTTTGAATTCGGGTAATCCTCCTGGTTCTTCTGGATTAGATACCCTAGGAGATAGACCCACCCACCACCACAGAACTCGTCCTCTACTGGAATTAGGGTCGAGTTCTAGCTCGAAGCAGCCATTGATTCCTTCTGTATCTTCACCAGCATCGGCTTGTGGATCAAGATTCCAAGTTCTTGAAAATGACCTGTTGCTTGATGAATGTGAAAAGGCAAGTCCAAGTATAAGAATTAGTTCTCCTCATGTTCATGTGAAGGATAAAGCAGCTGCAAAGCCCAAGGAGTTATGTGGAGATCCTGTTCGATCATTGCCCAAATTGCCGAAAAAACCTTCTACAAAAACCAACAAAGCTCCTGAGTTAGAACTTGTAGCCCCTGCTGTTGTTGAACATCAGTTCAAGCCTGCAAAAACCAGCAACCCCACCTCGATTGCAGACCATAATAATCAACCATGTCTTGTTCCAAAGGCGACCCTTGACTTCATTTCGGCTGTGATTCGACGCTCGACGAAAGAGAAAGAGATGCCCGACATACCATCTAAGGAGATCATAGTCGATGGCTGCCCCATTGTTCACACAATCAACACAAAGAAGATCAGAAGCTTTAAAATGAATTTGTCAGCATTGCAAACCAACTCCATATCGAACCGAAATCATTATACAATGGACACTCTTCCAACTGCAAGATGTGTAGACGAAGATGGAGATGGTTCGAAGACGGTATCGGGATCAGAATCATGTTCTAAGAAGATGTTGTGCTGGAAGTTTCATGGGACGGACAATGCTAATCTAATGCAAGCATTGAAAGATCTGATTCAGCTACACGAGCCGTCCATTGTGCTGATCTTTGGCACCAAAATCAGTGGTGCTGAAGCTGAACTCGTCGTGCGGGAGCTCTCGTTCTGCGGTTCGTACTGCAGAAAGCCTGATGGTTACAATGGTGGTGTTTGGCTGTTATTGTCCCGGCAAGATGTTCATATTGAAGTCGATTCATACAGCCCACAACAGGTTTCTGCATCAGTATATTTTGGTTCCAATACCAATAGACCTGCGTTTTGTCCTCCGAACGTCGATACCGAAACATCGTCGGGACCATGGGGATCGACTTTCTTCTATACTTCGACGAACTGGATGAGTTCAGTGGCATACTGA

Homology

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BLAST of CmoCh04G002860 vs. TrEMBL
Match: A0A0A0KLB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175790 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 5.2e-200
Identity = 400/658 (60.79%), Postives = 466/658 (70.82%), Query Frame = 1


Query: 9   QSDLQPTGAGDDEAAARTYLSRKKAK-RPLMASSSDLESHRSTTGATV--CNLSPSQTAR 68
           QS   PTGAGDDEAAAR YLSRKK K  P +  SSD  S RSTT ATV  CNL+PS+T R
Sbjct: 4   QSGHPPTGAGDDEAAARNYLSRKKPKVPPPIPPSSDFHSRRSTTIATVCNCNLTPSETTR 63

Query: 69  ITRQFDHSLIAWVFGQDIRPRQLAGRLRRHLHLTQDVEVFELGLGYFVLKFSETDYLALE 128
           IT+QF HSLIA V G+D RP QLA RLR HL LTQDV+VF+LGLGYFVLKFSETDYLALE
Sbjct: 64  ITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQLGLGYFVLKFSETDYLALE 123

Query: 129 DLPWSIPNLCIYAFRWTPDFKPSEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVL 188
           DLPWSIPNLCI+AF WTPDFKPSEAINSSV+VWIRL ELSIEYYD  IL++IA  IG  L
Sbjct: 124 DLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPELSIEYYDVGILKRIADAIGDPL 183

Query: 189 VKFDPVTKNRRKCKFARICIRVNLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLK 248
           VK DPVT++R KCKFAR CI VNLCDPLPSMI+LGR++Q+IEYEG + LC  C  V DL+
Sbjct: 184 VKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQRIEYEGFE-LCAKCNRVGDLR 243

Query: 249 QNC-------LNS---GNPPGSSGLDTLGDRPTHHHRTRPLLELGSSSSSKQPLIPSVSS 308
            +C       LN+    NP GS G +  GD P HH  TR   E+GS+S+SKQPLIP  SS
Sbjct: 244 HDCSSLNNPSLNNPSLNNPSGSYGFNPHGDEP-HHSVTRDFKEIGSTSNSKQPLIPE-SS 303

Query: 309 PASACGSRFQVLEN---DL-LLD-------ECEKASPSIRISSPHVHVKDKAAAKPKELC 368
           P SA  S   + +N   DL L+D       E  KA   +RISSP VHVKDK   K KE C
Sbjct: 304 PVSAWESSRFIEKNPPLDLKLIDWPNLPKRESGKAGSGVRISSPRVHVKDKEIPKKKEKC 363

Query: 369 GDPVRSLPKLPKKPSTKTNKAPELELVAPAVVEHQFKPAKTSNPTSIADHNNQP----CL 428
              V+ LP LPK+ ST T KAPEL+ V P+VVE + K  KT N T IADHN+QP      
Sbjct: 364 EISVQRLPNLPKQCSTITIKAPELKRVVPSVVEDRLKDTKTINSTMIADHNSQPPSPTAS 423

Query: 429 VP--------KATLDFISAVIRRSTKEKEMPDIPSKEIIVDGCPIVHTINTKKIRSFKMN 488
           +P        +ATL F+S  I   T+++E+ + PSK I     P V+TI+ KKI S  + 
Sbjct: 424 IPFLQPSPASEATLKFLSDAILCLTRKEEICNSPSKVINDSSFPTVYTIDPKKITSLNIA 483

Query: 489 LSALQTNSISNRNHYTMDTLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHGTDNANLM 548
           LS +Q          T++ +PT +  DE G GS+  SGSE C+KK+L WKFH  DNA LM
Sbjct: 484 LSEVQ----------TIELVPTMKGGDEGGVGSEVESGSEPCAKKILVWKFHVMDNAKLM 543

Query: 549 QALKDLIQLHEPSIVLIFGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWLLLSRQDV 608
           +ALKDLIQLHEPSIVLIFG KISG + + V+REL+FCGSY  KPDGYNGGVWLLLS+QDV
Sbjct: 544 RALKDLIQLHEPSIVLIFGNKISGVDTDKVMRELAFCGSYSSKPDGYNGGVWLLLSKQDV 603

Query: 609 HIEVDSYSPQQVSASVYFGSNTNRPAFCPPNVDTETSSGPWGSTFFYTSTNWMSSVAY 631
             +V+S+S QQVSASV F S TN   F P N DT+TSSGPWGSTFFYTSTNWM+S+AY
Sbjct: 604 QTKVNSFSSQQVSASVTFHSETNVQPFSPSNADTKTSSGPWGSTFFYTSTNWMTSLAY 648

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BLAST of CmoCh04G002860 vs. TrEMBL
Match: A0A0A0KNJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175780 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 3.9e-123
Identity = 288/661 (43.57%), Postives = 383/661 (57.94%), Query Frame = 1


Query: 20  DEAAARTYLSRKKAKRPLMASSSDLESHRSTTGATVCNLSPSQTARITRQFDHSLIAWVF 79
           DEAA+R + SR K+ +P+  S   +  H STT +TVC  S SQT  I R+F HSLIAWV 
Sbjct: 8   DEAASRNHGSRNKSNQPISHSPEFMSLH-STTRSTVCKFSASQTDLIAREFAHSLIAWVV 67

Query: 80  GQDIRPRQLAGRLRRHLHLTQDVEVFELGLGYFVLKFSETDYLALEDLPWSIPNLCIYAF 139
           G++IRP +LA  L RHL LT+  +VFELGLGYFVLKF ETD+LA+ED PW IPNLCIYAF
Sbjct: 68  GKEIRPLKLARHLYRHLRLTKLPDVFELGLGYFVLKFCETDFLAIEDNPWPIPNLCIYAF 127

Query: 140 RWTPDFKPSEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVLVKFDPVTKNRRKCK 199
            WTP+FKPSEA++S++D WIRL+EL IEYY E+ILR I  T+G  LVK DP+TK+R+KCK
Sbjct: 128 PWTPNFKPSEAMDSAIDCWIRLKELPIEYYKEDILRDIGKTVGEGLVKIDPITKDRKKCK 187

Query: 200 FARICIRVNLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLKQNCLNSGNPPGSSG 259
           +ARIC+R+N+ +PLPS I++G+I Q+IEYEG DLLCP C  V  LK +CLNS    GSS 
Sbjct: 188 YARICVRINVYEPLPSSIRIGKILQEIEYEGFDLLCPRCECVVHLKHDCLNSS---GSS- 247

Query: 260 LDTLGDRPTHHHRTRPLLELGSSSSSKQPLIPSVSSPASACGSRFQV--------LENDL 319
                   +HH R          S+SKQPL+ S SS   A GSR++V        L+N  
Sbjct: 248 ----SSFESHHPR--------DGSNSKQPLVSSESS--VAWGSRYEVPGTESKSSLQNLK 307

Query: 320 LLDE-----CEKASPSIRISS--PHVH-VKDKAAAKPKELCGDPVRSLPKLPK------- 379
            L        EKA+  I  SS  P +  +  +   K KE CG    + P LPK       
Sbjct: 308 ALSTPSMGGSEKAATRISSSSLLPQLSGLLTEPLEKQKEKCGGSFETFPNLPKEDLPRAL 367

Query: 380 -------KPSTKTNKAPELE--------LVAPAVVEHQFKPAKTSNPTSIADHNNQ---- 439
                  + S+ T   P LE        ++AP   E+ F PA+T   T +  +NNQ    
Sbjct: 368 SISSNLEESSSSTISVPVLEHKNLNLSMVLAPLPAENPFTPAETRCSTKLEVYNNQPQPS 427

Query: 440 ------------PCLVPKATLDFISAVIRRSTKEKEMPDIPSKEIIVDGCPIVHTINTKK 499
                       P    K    F S+ I RS  +K +    S+   ++  PI +TI  + 
Sbjct: 428 SSPLAASVSTQPPSPSSKTIPTFCSSGIARSILKKNITSTSSQGFGINRRPIFYTI-PES 487

Query: 500 IRSFKMNLSALQTNSISNRNHYTMDTLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHG 559
           I+SF++ LS    +S   +N +++  + T R       G+K +S  +  SKKML W F G
Sbjct: 488 IKSFEVGLSE-NPDSAPKQNQFSISFVSTPR------SGTKVISALD--SKKMLGWNFRG 547

Query: 560 TDNANLMQALKDLIQLHEPSIVLIFGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWL 619
            DN NL++ L  ++Q +EPSIV+IFGT+I+    E VV +L+F GSY +K D Y+GGVWL
Sbjct: 548 MDNVNLIEGLNYMVQKYEPSIVVIFGTRITDNVVEEVVDKLAFPGSYIKKFDNYHGGVWL 607

Query: 620 LLSRQDVH---IEVDSYSPQQVSASVYFGSNTNRPAFCPPNVD-TETSSGPWGSTFFYTS 623
            + R+DV     EV+SYS +QVSAS YF    + P       D  +TS   WG   F+ +
Sbjct: 608 FMFREDVQTEVFEVNSYSTKQVSASTYFQLEIDEPMARHSYPDMIKTSLQTWGLDSFHDA 639

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BLAST of CmoCh04G002860 vs. TrEMBL
Match: A0A0A0KRY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175800 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 9.4e-101
Identity = 267/636 (41.98%), Postives = 341/636 (53.62%), Query Frame = 1


Query: 30  RKKAKRPLMASSSDLESHRSTTGATVCNLSPSQTARITRQFDHSLIAWVFGQDIRPRQLA 89
           RKK   P+ +SS + ++H  T      NL+PSQTAR   +F HSLIA V G++I    L 
Sbjct: 26  RKKYNIPV-SSSPNSKTHHPTINL---NLTPSQTARNNDEFRHSLIARVIGKNIHHENLT 85

Query: 90  GRLRRHLHLTQDVEVFELGLGYFVLKFSETD--YLALEDLPWSIPNLCIYAFRWTPDFKP 149
            RLRRHL LT D+ V  LGLG+F L FS     Y AL++ PW IP+LCI+A  W P+FKP
Sbjct: 86  FRLRRHLPLTGDLNVVPLGLGFFALNFSNPFDYYEALKERPWLIPHLCIHASPWIPNFKP 145

Query: 150 SEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVLVKFDPVTKNRRKCKFARICIRV 209
           S+A  S VDVWIRL EL +E+Y+ E+   IA  IG  LVK DPVT+ ++KC FARICI +
Sbjct: 146 SKAFISFVDVWIRLPELGMEHYNREMFENIAKAIGVDLVKIDPVTERKQKCMFARICITI 205

Query: 210 NLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLKQNCLNSGNPPGSSGLDTLGDRP 269
            L +PL   I +   +Q I YEGLD LC  C  V  LK +CLN   P  SSG D     P
Sbjct: 206 TLSNPLIHYIHIEGSRQNIVYEGLDSLCSVCGCVDSLKHDCLNQNIPSASSGYDPHQQNP 265

Query: 270 THHHRTRPLLELGSSSSSKQPLIPSVSSPASACGSRFQVLEN------DLLLDECEKASP 329
                  P +   SSS S      S S  +S+ GS    L +      DL  D   K +P
Sbjct: 266 CPLQAFDPSVSSSSSSGSSS---GSGSGSSSSSGSGLDSLCSVCGCVYDLKHDCLNKNNP 325

Query: 330 SIRISSPHVHVKDKA---AAKPKELCG-------DPVRSLPKLPKKPSTKTNKA---PEL 389
           S   S   +H ++     A   +   G         + SLP L     +K+ +    PEL
Sbjct: 326 S-GSSGHELHQQNPCPWQAIDSRYSSGLGLDSKKPLIHSLPSLESSSRSKSQEKDPFPEL 385

Query: 390 ELVAPA------VVEHQFK--------PAKTSNPTSIADHNN---QPCLVPKATLDFISA 449
            L   A      VVE++ K         AK S PT +A HNN    P  V +A L   S 
Sbjct: 386 NLKNYAKLKMGEVVENEKKTLPNLPRESAKASCPTKLALHNNGSRSPSAV-EAGLTLFST 445

Query: 450 VIRRSTKEKEMPDIPSKEI-IVDGCPIVHTINTKKIRSFKMNLSALQTNSISNRNHYTMD 509
            ++R T  KEM + P  E+ +VD  P V+TIN   + S  +  S + T + SN+  Y + 
Sbjct: 446 AMQRLTTVKEMINTPFGEVDVVDSWPTVYTINPTTM-SLGIEFSEVPTMTGSNQTQYAIS 505

Query: 510 -TLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHGTDNANLMQALKDLIQLHEPSIVLI 569
             L + R  D + D     S    CSK MLC  F   D    ++ALKDLI LH+PSIVLI
Sbjct: 506 FVLNSGRENDNEVDSKAASSVPPWCSKTMLCCNFDWKDAELQIRALKDLIGLHKPSIVLI 565

Query: 570 FGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWLLLSRQDVHIEVDSYSPQQVSASVY 626
           FG+KIS ++A+ VVRE +F G YCRKPDG NGGVWL+LSR+DV IE ++ SPQ+V ASV+
Sbjct: 566 FGSKISSSDADEVVREFAFNGFYCRKPDGNNGGVWLMLSRKDVQIEGNADSPQKVFASVH 625

[Close]

BLAST of CmoCh04G002860 vs. TrEMBL
Match: A5AT31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006250 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 5.4e-32
Identity = 83/196 (42.35%), Postives = 117/196 (59.69%), Query Frame = 1


Query: 47  HRSTT-----GATVCN-----LSPSQTARITRQFDHSLIAWVFGQDIRPRQLAGRLRRHL 106
           H+S T     G T CN     LS ++   ++  + +SLIA V G+ +  +     L R  
Sbjct: 67  HKSDTLDDGSGDTSCNIPMIKLSSTEKENLSAPWKYSLIAKVLGRKVGLQYCQAHLHRLW 126

Query: 107 HLTQDVEVFELGLGYFVLKFS-ETDYLAL-EDLPWSIPNLCIYAFRWTPDFKPSEAINSS 166
            L   V++ +LG G+F+LKFS  TDY+ + + +PW I    I    W P+FKPSEA  + 
Sbjct: 127 SLEGTVDIIDLGYGFFLLKFSLPTDYIKVFKGVPWLIHGYYISLRPWVPNFKPSEATITH 186

Query: 167 VDVWIRLRELSIEYYDEEILRQIAATIGGVLVKFDPVTKNRRKCKFARICIRVNLCDPLP 226
             VW+RL EL IEYYD+E+L QI A IG   +K DP+T+ + + +FAR+C+ V+L   L 
Sbjct: 187 AKVWVRLPELPIEYYDKEVLLQIGAAIGRT-IKIDPITEKQARGRFARMCVEVDLKHSLL 246

Query: 227 SMIKLGRIQQKIEYEG 231
             IKLG +QQKIEYEG
Sbjct: 247 PQIKLGELQQKIEYEG 261

[Close]

BLAST of CmoCh04G002860 vs. TrEMBL
Match: F6HHZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0158g00420 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 98/309 (31.72%), Postives = 152/309 (49.19%), Query Frame = 1


Query: 354 LPKKPSTKTNKAPELELVAPAVVEHQFKPAKTSNPTSIADHNNQPCL---------VPKA 413
           LP   S +T   P  E+ +P       K A  + PTS++ +  QP           +P A
Sbjct: 127 LPLPASFRTTSTPT-EIWSPRCSNLVMKNASCTAPTSLSLNQPQPTKQSAIPQLSPMPDA 186

Query: 414 TLDFISAVIRRSTKEKEMPDIPS-----KEIIVDGCPIVHTINTK-KIRSFKMNLSALQT 473
           T+ F S V++RSTK++++  IP      +E+  +  P V +I++        +++S L T
Sbjct: 187 TIQFHSEVMQRSTKQRKIKSIPGLVQLFQELSTESSPTVFSIDSAISDIEISVSISPLPT 246

Query: 474 -----NSIS---NRNHYTMDTLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHGTDNAN 533
                +SIS   ++ ++ M  LP  +      + SK +   E   KK+LCW   G     
Sbjct: 247 GKANHHSISFSPSKTNHNMHPLPKGQAGTYQ-NVSKAIP--EPHPKKLLCWNCRGAGELK 306

Query: 534 LMQALKDLIQLHEPSIVLIFGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWLLLSRQ 593
            M+A+KDLI+LHEPSIV++   KISG +A+ V++E+ F G Y   P+G+  G+W+L   +
Sbjct: 307 FMRAIKDLIKLHEPSIVVLLEPKISGGDADQVIKEIGFSGQYHIDPEGFAHGIWILWQTE 366

Query: 594 DVHIEVDSYSPQQVSASVYFGSNTNRPAFCPPNVDTETSSG--------------PWGST 626
           DV  EV S +P Q+  SV   S       C    DT+  +G               W S+
Sbjct: 367 DVRAEVTSSTPHQIHLSVQVLSEAFDGMLCGVGADTDALNGIPYEVDDNLEPFTQHWDSS 426

[Close]

BLAST of CmoCh04G002860 vs. TAIR10
Match: AT2G01050.1 (AT2G01050.1 zinc ion binding;nucleic acid binding)

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-18
Identity = 59/195 (30.26%), Postives = 93/195 (47.69%), Query Frame = 1


Query: 74  LIAWVFGQDIRPRQLAGRLRRHLHLTQDVEVFELGLGYFVLKFS-ETDYLA-LEDLPWSI 133
           +I  V G  I    L  +LR     +  + V +L   +F+++F  E +Y+A L   PW +
Sbjct: 81  MIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRV 140

Query: 134 PNLCIYAFRWTPDFKPSEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVLVKFDPV 193
               +    W+  F P      +  VW+RL  +   YY   +L +IA  +G  L K D  
Sbjct: 141 LGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPL-KVDMN 200

Query: 194 TKNRRKCKFARICIRVNLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLKQNCLNS 253
           T N  K +FAR+CI VNL  PL   + +   +  + YEGL  +C +C +   L  +C  +
Sbjct: 201 TINFDKGRFARVCIEVNLAKPLKGTVLINGDRYFVAYEGLSKICSSCGIYGHLVHSCPRN 260

Query: 254 GNPPGSSGLDTLGDR 267
                S+G +T+ DR
Sbjct: 261 VVVKVSAGAETVTDR 274

[Close]

BLAST of CmoCh04G002860 vs. TAIR10
Match: AT2G17920.1 (AT2G17920.1 nucleic acid binding;zinc ion binding)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-07
Identity = 35/134 (26.12%), Postives = 63/134 (47.01%), Query Frame = 1


Query: 117 SETDYLALEDL-PWSIPNLCIYAFRWTPDFKPSEAINSSVDVWIRLRELSIEYYDEEILR 176
           SE D L+++   PW   N  + + RW P   P+    +++D+W+++R +   Y  EE   
Sbjct: 84  SEMDLLSVQRREPWLFNNWFVASQRWQP--APALNFVTTIDLWVQMRGIPFLYVSEETAL 143

Query: 177 QIAATIGGVLVKFDPVTKNRRKCKFARICIRVNLCDPLPSMIKL-----GRIQQKIEYEG 236
           +IA  IG + +  D       +  + R+ +RV + D L    ++          + +YE 
Sbjct: 144 EIAQEIGAI-ISLDFHDTTSTQIAYIRVRVRVGITDSLRFFQRITFESGESALIRFQYER 203

Query: 237 LDLLCPNC-RLVHD 244
           L  +C NC R  H+
Sbjct: 204 LRRICSNCFRFTHN 214

[Close]

BLAST of CmoCh04G002860 vs. NCBI nr
Match: gi|778700726|ref|XP_011654905.1| (PREDICTED: uncharacterized protein LOC105435457 isoform X1 [Cucumis sativus])

HSP 1 Score: 712.6 bits (1838), Expect = 6.1e-202
Identity = 398/648 (61.42%), Postives = 464/648 (71.60%), Query Frame = 1


Query: 9   QSDLQPTGAGDDEAAARTYLSRKKAK-RPLMASSSDLESHRSTTGATV--CNLSPSQTAR 68
           QS   PTGAGDDEAAAR YLSRKK K  P +  SSD  S RSTT ATV  CNL+PS+T R
Sbjct: 4   QSGHPPTGAGDDEAAARNYLSRKKPKVPPPIPPSSDFHSRRSTTIATVCNCNLTPSETTR 63

Query: 69  ITRQFDHSLIAWVFGQDIRPRQLAGRLRRHLHLTQDVEVFELGLGYFVLKFSETDYLALE 128
           IT+QF HSLIA V G+D RP QLA RLR HL LTQDV+VF+LGLGYFVLKFSETDYLALE
Sbjct: 64  ITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQLGLGYFVLKFSETDYLALE 123

Query: 129 DLPWSIPNLCIYAFRWTPDFKPSEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVL 188
           DLPWSIPNLCI+AF WTPDFKPSEAINSSV+VWIRL ELSIEYYD  IL++IA  IG  L
Sbjct: 124 DLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPELSIEYYDVGILKRIADAIGDPL 183

Query: 189 VKFDPVTKNRRKCKFARICIRVNLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLK 248
           VK DPVT++R KCKFAR CI VNLCDPLPSMI+LGR++Q+IEYEG + LC  C  V DL+
Sbjct: 184 VKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQRIEYEGFE-LCAKCNRVGDLR 243

Query: 249 QNCLNSGNPPGSSGLDTLGDRPTHHHRTRPLLELGSSSSSKQPLIPSVSSPASACGSRFQ 308
            +C +  NP GS G +  GD P HH  TR   E+GS+S+SKQPLIP  SSP SA  S   
Sbjct: 244 HDCSSLNNPSGSYGFNPHGDEP-HHSVTRDFKEIGSTSNSKQPLIPE-SSPVSAWESSRF 303

Query: 309 VLEN---DL-LLD-------ECEKASPSIRISSPHVHVKDKAAAKPKELCGDPVRSLPKL 368
           + +N   DL L+D       E  KA   +RISSP VHVKDK   K KE C   V+ LP L
Sbjct: 304 IEKNPPLDLKLIDWPNLPKRESGKAGSGVRISSPRVHVKDKEIPKKKEKCEISVQRLPNL 363

Query: 369 PKKPSTKTNKAPELELVAPAVVEHQFKPAKTSNPTSIADHNNQP----CLVP-------- 428
           PK+ ST T KAPEL+ V P+VVE + K  KT N T IADHN+QP      +P        
Sbjct: 364 PKQCSTITIKAPELKRVVPSVVEDRLKDTKTINSTMIADHNSQPPSPTASIPFLQPSPAS 423

Query: 429 KATLDFISAVIRRSTKEKEMPDIPSKEIIVDGCPIVHTINTKKIRSFKMNLSALQTNSIS 488
           +ATL F+S  I   T+++E+ + PSK I     P V+TI+ KKI S  + LS +Q     
Sbjct: 424 EATLKFLSDAILCLTRKEEICNSPSKVINDSSFPTVYTIDPKKITSLNIALSEVQ----- 483

Query: 489 NRNHYTMDTLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHGTDNANLMQALKDLIQLH 548
                T++ +PT +  DE G GS+  SGSE C+KK+L WKFH  DNA LM+ALKDLIQLH
Sbjct: 484 -----TIELVPTMKGGDEGGVGSEVESGSEPCAKKILVWKFHVMDNAKLMRALKDLIQLH 543

Query: 549 EPSIVLIFGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWLLLSRQDVHIEVDSYSPQ 608
           EPSIVLIFG KISG + + V+REL+FCGSY  KPDGYNGGVWLLLS+QDV  +V+S+S Q
Sbjct: 544 EPSIVLIFGNKISGVDTDKVMRELAFCGSYSSKPDGYNGGVWLLLSKQDVQTKVNSFSSQ 603

Query: 609 QVSASVYFGSNTNRPAFCPPNVDTETSSGPWGSTFFYTSTNWMSSVAY 631
           QVSASV F S TN   F P N DT+TSSGPWGSTFFYTSTNWM+S+AY
Sbjct: 604 QVSASVTFHSETNVQPFSPSNADTKTSSGPWGSTFFYTSTNWMTSLAY 638

[Close]

BLAST of CmoCh04G002860 vs. NCBI nr
Match: gi|700195278|gb|KGN50455.1| (hypothetical protein Csa_5G175790 [Cucumis sativus])

HSP 1 Score: 705.7 bits (1820), Expect = 7.4e-200
Identity = 400/658 (60.79%), Postives = 466/658 (70.82%), Query Frame = 1


Query: 9   QSDLQPTGAGDDEAAARTYLSRKKAK-RPLMASSSDLESHRSTTGATV--CNLSPSQTAR 68
           QS   PTGAGDDEAAAR YLSRKK K  P +  SSD  S RSTT ATV  CNL+PS+T R
Sbjct: 4   QSGHPPTGAGDDEAAARNYLSRKKPKVPPPIPPSSDFHSRRSTTIATVCNCNLTPSETTR 63

Query: 69  ITRQFDHSLIAWVFGQDIRPRQLAGRLRRHLHLTQDVEVFELGLGYFVLKFSETDYLALE 128
           IT+QF HSLIA V G+D RP QLA RLR HL LTQDV+VF+LGLGYFVLKFSETDYLALE
Sbjct: 64  ITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQLGLGYFVLKFSETDYLALE 123

Query: 129 DLPWSIPNLCIYAFRWTPDFKPSEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVL 188
           DLPWSIPNLCI+AF WTPDFKPSEAINSSV+VWIRL ELSIEYYD  IL++IA  IG  L
Sbjct: 124 DLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPELSIEYYDVGILKRIADAIGDPL 183

Query: 189 VKFDPVTKNRRKCKFARICIRVNLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLK 248
           VK DPVT++R KCKFAR CI VNLCDPLPSMI+LGR++Q+IEYEG + LC  C  V DL+
Sbjct: 184 VKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQRIEYEGFE-LCAKCNRVGDLR 243

Query: 249 QNC-------LNS---GNPPGSSGLDTLGDRPTHHHRTRPLLELGSSSSSKQPLIPSVSS 308
            +C       LN+    NP GS G +  GD P HH  TR   E+GS+S+SKQPLIP  SS
Sbjct: 244 HDCSSLNNPSLNNPSLNNPSGSYGFNPHGDEP-HHSVTRDFKEIGSTSNSKQPLIPE-SS 303

Query: 309 PASACGSRFQVLEN---DL-LLD-------ECEKASPSIRISSPHVHVKDKAAAKPKELC 368
           P SA  S   + +N   DL L+D       E  KA   +RISSP VHVKDK   K KE C
Sbjct: 304 PVSAWESSRFIEKNPPLDLKLIDWPNLPKRESGKAGSGVRISSPRVHVKDKEIPKKKEKC 363

Query: 369 GDPVRSLPKLPKKPSTKTNKAPELELVAPAVVEHQFKPAKTSNPTSIADHNNQP----CL 428
              V+ LP LPK+ ST T KAPEL+ V P+VVE + K  KT N T IADHN+QP      
Sbjct: 364 EISVQRLPNLPKQCSTITIKAPELKRVVPSVVEDRLKDTKTINSTMIADHNSQPPSPTAS 423

Query: 429 VP--------KATLDFISAVIRRSTKEKEMPDIPSKEIIVDGCPIVHTINTKKIRSFKMN 488
           +P        +ATL F+S  I   T+++E+ + PSK I     P V+TI+ KKI S  + 
Sbjct: 424 IPFLQPSPASEATLKFLSDAILCLTRKEEICNSPSKVINDSSFPTVYTIDPKKITSLNIA 483

Query: 489 LSALQTNSISNRNHYTMDTLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHGTDNANLM 548
           LS +Q          T++ +PT +  DE G GS+  SGSE C+KK+L WKFH  DNA LM
Sbjct: 484 LSEVQ----------TIELVPTMKGGDEGGVGSEVESGSEPCAKKILVWKFHVMDNAKLM 543

Query: 549 QALKDLIQLHEPSIVLIFGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWLLLSRQDV 608
           +ALKDLIQLHEPSIVLIFG KISG + + V+REL+FCGSY  KPDGYNGGVWLLLS+QDV
Sbjct: 544 RALKDLIQLHEPSIVLIFGNKISGVDTDKVMRELAFCGSYSSKPDGYNGGVWLLLSKQDV 603

Query: 609 HIEVDSYSPQQVSASVYFGSNTNRPAFCPPNVDTETSSGPWGSTFFYTSTNWMSSVAY 631
             +V+S+S QQVSASV F S TN   F P N DT+TSSGPWGSTFFYTSTNWM+S+AY
Sbjct: 604 QTKVNSFSSQQVSASVTFHSETNVQPFSPSNADTKTSSGPWGSTFFYTSTNWMTSLAY 648

[Close]

BLAST of CmoCh04G002860 vs. NCBI nr
Match: gi|700195277|gb|KGN50454.1| (hypothetical protein Csa_5G175780 [Cucumis sativus])

HSP 1 Score: 450.3 bits (1157), Expect = 5.6e-123
Identity = 288/661 (43.57%), Postives = 383/661 (57.94%), Query Frame = 1


Query: 20  DEAAARTYLSRKKAKRPLMASSSDLESHRSTTGATVCNLSPSQTARITRQFDHSLIAWVF 79
           DEAA+R + SR K+ +P+  S   +  H STT +TVC  S SQT  I R+F HSLIAWV 
Sbjct: 8   DEAASRNHGSRNKSNQPISHSPEFMSLH-STTRSTVCKFSASQTDLIAREFAHSLIAWVV 67

Query: 80  GQDIRPRQLAGRLRRHLHLTQDVEVFELGLGYFVLKFSETDYLALEDLPWSIPNLCIYAF 139
           G++IRP +LA  L RHL LT+  +VFELGLGYFVLKF ETD+LA+ED PW IPNLCIYAF
Sbjct: 68  GKEIRPLKLARHLYRHLRLTKLPDVFELGLGYFVLKFCETDFLAIEDNPWPIPNLCIYAF 127

Query: 140 RWTPDFKPSEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVLVKFDPVTKNRRKCK 199
            WTP+FKPSEA++S++D WIRL+EL IEYY E+ILR I  T+G  LVK DP+TK+R+KCK
Sbjct: 128 PWTPNFKPSEAMDSAIDCWIRLKELPIEYYKEDILRDIGKTVGEGLVKIDPITKDRKKCK 187

Query: 200 FARICIRVNLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLKQNCLNSGNPPGSSG 259
           +ARIC+R+N+ +PLPS I++G+I Q+IEYEG DLLCP C  V  LK +CLNS    GSS 
Sbjct: 188 YARICVRINVYEPLPSSIRIGKILQEIEYEGFDLLCPRCECVVHLKHDCLNSS---GSS- 247

Query: 260 LDTLGDRPTHHHRTRPLLELGSSSSSKQPLIPSVSSPASACGSRFQV--------LENDL 319
                   +HH R          S+SKQPL+ S SS   A GSR++V        L+N  
Sbjct: 248 ----SSFESHHPR--------DGSNSKQPLVSSESS--VAWGSRYEVPGTESKSSLQNLK 307

Query: 320 LLDE-----CEKASPSIRISS--PHVH-VKDKAAAKPKELCGDPVRSLPKLPK------- 379
            L        EKA+  I  SS  P +  +  +   K KE CG    + P LPK       
Sbjct: 308 ALSTPSMGGSEKAATRISSSSLLPQLSGLLTEPLEKQKEKCGGSFETFPNLPKEDLPRAL 367

Query: 380 -------KPSTKTNKAPELE--------LVAPAVVEHQFKPAKTSNPTSIADHNNQ---- 439
                  + S+ T   P LE        ++AP   E+ F PA+T   T +  +NNQ    
Sbjct: 368 SISSNLEESSSSTISVPVLEHKNLNLSMVLAPLPAENPFTPAETRCSTKLEVYNNQPQPS 427

Query: 440 ------------PCLVPKATLDFISAVIRRSTKEKEMPDIPSKEIIVDGCPIVHTINTKK 499
                       P    K    F S+ I RS  +K +    S+   ++  PI +TI  + 
Sbjct: 428 SSPLAASVSTQPPSPSSKTIPTFCSSGIARSILKKNITSTSSQGFGINRRPIFYTI-PES 487

Query: 500 IRSFKMNLSALQTNSISNRNHYTMDTLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHG 559
           I+SF++ LS    +S   +N +++  + T R       G+K +S  +  SKKML W F G
Sbjct: 488 IKSFEVGLSE-NPDSAPKQNQFSISFVSTPR------SGTKVISALD--SKKMLGWNFRG 547

Query: 560 TDNANLMQALKDLIQLHEPSIVLIFGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWL 619
            DN NL++ L  ++Q +EPSIV+IFGT+I+    E VV +L+F GSY +K D Y+GGVWL
Sbjct: 548 MDNVNLIEGLNYMVQKYEPSIVVIFGTRITDNVVEEVVDKLAFPGSYIKKFDNYHGGVWL 607

Query: 620 LLSRQDVH---IEVDSYSPQQVSASVYFGSNTNRPAFCPPNVD-TETSSGPWGSTFFYTS 623
            + R+DV     EV+SYS +QVSAS YF    + P       D  +TS   WG   F+ +
Sbjct: 608 FMFREDVQTEVFEVNSYSTKQVSASTYFQLEIDEPMARHSYPDMIKTSLQTWGLDSFHDA 639

[Close]

BLAST of CmoCh04G002860 vs. NCBI nr
Match: gi|700195279|gb|KGN50456.1| (hypothetical protein Csa_5G175800 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 1.3e-100
Identity = 267/636 (41.98%), Postives = 341/636 (53.62%), Query Frame = 1


Query: 30  RKKAKRPLMASSSDLESHRSTTGATVCNLSPSQTARITRQFDHSLIAWVFGQDIRPRQLA 89
           RKK   P+ +SS + ++H  T      NL+PSQTAR   +F HSLIA V G++I    L 
Sbjct: 26  RKKYNIPV-SSSPNSKTHHPTINL---NLTPSQTARNNDEFRHSLIARVIGKNIHHENLT 85

Query: 90  GRLRRHLHLTQDVEVFELGLGYFVLKFSETD--YLALEDLPWSIPNLCIYAFRWTPDFKP 149
            RLRRHL LT D+ V  LGLG+F L FS     Y AL++ PW IP+LCI+A  W P+FKP
Sbjct: 86  FRLRRHLPLTGDLNVVPLGLGFFALNFSNPFDYYEALKERPWLIPHLCIHASPWIPNFKP 145

Query: 150 SEAINSSVDVWIRLRELSIEYYDEEILRQIAATIGGVLVKFDPVTKNRRKCKFARICIRV 209
           S+A  S VDVWIRL EL +E+Y+ E+   IA  IG  LVK DPVT+ ++KC FARICI +
Sbjct: 146 SKAFISFVDVWIRLPELGMEHYNREMFENIAKAIGVDLVKIDPVTERKQKCMFARICITI 205

Query: 210 NLCDPLPSMIKLGRIQQKIEYEGLDLLCPNCRLVHDLKQNCLNSGNPPGSSGLDTLGDRP 269
            L +PL   I +   +Q I YEGLD LC  C  V  LK +CLN   P  SSG D     P
Sbjct: 206 TLSNPLIHYIHIEGSRQNIVYEGLDSLCSVCGCVDSLKHDCLNQNIPSASSGYDPHQQNP 265

Query: 270 THHHRTRPLLELGSSSSSKQPLIPSVSSPASACGSRFQVLEN------DLLLDECEKASP 329
                  P +   SSS S      S S  +S+ GS    L +      DL  D   K +P
Sbjct: 266 CPLQAFDPSVSSSSSSGSSS---GSGSGSSSSSGSGLDSLCSVCGCVYDLKHDCLNKNNP 325

Query: 330 SIRISSPHVHVKDKA---AAKPKELCG-------DPVRSLPKLPKKPSTKTNKA---PEL 389
           S   S   +H ++     A   +   G         + SLP L     +K+ +    PEL
Sbjct: 326 S-GSSGHELHQQNPCPWQAIDSRYSSGLGLDSKKPLIHSLPSLESSSRSKSQEKDPFPEL 385

Query: 390 ELVAPA------VVEHQFK--------PAKTSNPTSIADHNN---QPCLVPKATLDFISA 449
            L   A      VVE++ K         AK S PT +A HNN    P  V +A L   S 
Sbjct: 386 NLKNYAKLKMGEVVENEKKTLPNLPRESAKASCPTKLALHNNGSRSPSAV-EAGLTLFST 445

Query: 450 VIRRSTKEKEMPDIPSKEI-IVDGCPIVHTINTKKIRSFKMNLSALQTNSISNRNHYTMD 509
            ++R T  KEM + P  E+ +VD  P V+TIN   + S  +  S + T + SN+  Y + 
Sbjct: 446 AMQRLTTVKEMINTPFGEVDVVDSWPTVYTINPTTM-SLGIEFSEVPTMTGSNQTQYAIS 505

Query: 510 -TLPTARCVDEDGDGSKTVSGSESCSKKMLCWKFHGTDNANLMQALKDLIQLHEPSIVLI 569
             L + R  D + D     S    CSK MLC  F   D    ++ALKDLI LH+PSIVLI
Sbjct: 506 FVLNSGRENDNEVDSKAASSVPPWCSKTMLCCNFDWKDAELQIRALKDLIGLHKPSIVLI 565

Query: 570 FGTKISGAEAELVVRELSFCGSYCRKPDGYNGGVWLLLSRQDVHIEVDSYSPQQVSASVY 626
           FG+KIS ++A+ VVRE +F G YCRKPDG NGGVWL+LSR+DV IE ++ SPQ+V ASV+
Sbjct: 566 FGSKISSSDADEVVREFAFNGFYCRKPDGNNGGVWLMLSRKDVQIEGNADSPQKVFASVH 625

[Close]

BLAST of CmoCh04G002860 vs. NCBI nr
Match: gi|147805812|emb|CAN60544.1| (hypothetical protein VITISV_006250 [Vitis vinifera])

HSP 1 Score: 147.5 bits (371), Expect = 7.8e-32
Identity = 83/196 (42.35%), Postives = 117/196 (59.69%), Query Frame = 1


Query: 47  HRSTT-----GATVCN-----LSPSQTARITRQFDHSLIAWVFGQDIRPRQLAGRLRRHL 106
           H+S T     G T CN     LS ++   ++  + +SLIA V G+ +  +     L R  
Sbjct: 67  HKSDTLDDGSGDTSCNIPMIKLSSTEKENLSAPWKYSLIAKVLGRKVGLQYCQAHLHRLW 126

Query: 107 HLTQDVEVFELGLGYFVLKFS-ETDYLAL-EDLPWSIPNLCIYAFRWTPDFKPSEAINSS 166
            L   V++ +LG G+F+LKFS  TDY+ + + +PW I    I    W P+FKPSEA  + 
Sbjct: 127 SLEGTVDIIDLGYGFFLLKFSLPTDYIKVFKGVPWLIHGYYISLRPWVPNFKPSEATITH 186

Query: 167 VDVWIRLRELSIEYYDEEILRQIAATIGGVLVKFDPVTKNRRKCKFARICIRVNLCDPLP 226
             VW+RL EL IEYYD+E+L QI A IG   +K DP+T+ + + +FAR+C+ V+L   L 
Sbjct: 187 AKVWVRLPELPIEYYDKEVLLQIGAAIGRT-IKIDPITEKQARGRFARMCVEVDLKHSLL 246

Query: 227 SMIKLGRIQQKIEYEG 231
             IKLG +QQKIEYEG
Sbjct: 247 PQIKLGELQQKIEYEG 261

The following BLAST results are available for this feature:

BLAST of CmoCh04G002860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G002860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLB0_CUCSA	5.2e-200	60.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175790 PE=4 SV=1	[more]
A0A0A0KNJ5_CUCSA	3.9e-123	43.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175780 PE=4 SV=1	[more]
A0A0A0KRY0_CUCSA	9.4e-101	41.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175800 PE=4 SV=1	[more]
A5AT31_VITVI	5.4e-32	42.35	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006250 PE=4 SV=1	[more]
F6HHZ1_VITVI	1.4e-27	31.72	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0158g00420 PE=4 SV=...	[more]

BLAST of CmoCh04G002860 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01050.1	2.3e-18	30.26	zinc ion binding;nucleic acid binding	[more]
AT2G17920.1	1.1e-07	26.12	nucleic acid binding;zinc ion binding	[more]

BLAST of CmoCh04G002860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778700726\|ref\|XP_011654905.1\|	6.1e-202	61.42	PREDICTED: uncharacterized protein LOC105435457 isoform X1 [Cucumis sativus]	[more]
gi\|700195278\|gb\|KGN50455.1\|	7.4e-200	60.79	hypothetical protein Csa_5G175790 [Cucumis sativus]	[more]
gi\|700195277\|gb\|KGN50454.1\|	5.6e-123	43.57	hypothetical protein Csa_5G175780 [Cucumis sativus]	[more]
gi\|700195279\|gb\|KGN50456.1\|	1.3e-100	41.98	hypothetical protein Csa_5G175800 [Cucumis sativus]	[more]
gi\|147805812\|emb\|CAN60544.1\|	7.8e-32	42.35	hypothetical protein VITISV_006250 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025558	DUF4283

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G002860.1	CmoCh04G002860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 67..205 score: 1.9
None	No IPR available	PANTHER	PTHR31286	FAMILY NOT NAMED	coord: 41..248 score: 4.0
None	No IPR available	PANTHER	PTHR31286:SF7	SUBFAMILY NOT NAMED	coord: 41..248 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G002860	Watermelon (97103) v2	cmowmbB714
CmoCh04G002860	Wax gourd	cmowgoB0910
CmoCh04G002860	Cucurbita moschata (Rifu)	cmocmoB464
CmoCh04G002860	Cucumber (Gy14) v1	cgycmoB0474
CmoCh04G002860	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G002860	Cucurbita maxima (Rimu)	cmacmoB731
CmoCh04G002860	Wild cucumber (PI 183967)	cmocpiB747
CmoCh04G002860	Cucumber (Chinese Long) v2	cmocuB737
CmoCh04G002860	Melon (DHL92) v3.5.1	cmomeB646
CmoCh04G002860	Watermelon (Charleston Gray)	cmowcgB644
CmoCh04G002860	Watermelon (97103) v1	cmowmB720
CmoCh04G002860	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G002860	Cucurbita pepo (Zucchini)	cmocpeB674
CmoCh04G002860	Bottle gourd (USVL1VR-Ls)	cmolsiB670
CmoCh04G002860	Cucumber (Gy14) v2	cgybcmoB652
CmoCh04G002860	Melon (DHL92) v3.6.1	cmomedB733
CmoCh04G002860	Silver-seed gourd	carcmoB1139
CmoCh04G002860	Silver-seed gourd	carcmoB1148
CmoCh04G002860	Cucumber (Chinese Long) v3	cmocucB0837
CmoCh04G002860	Cucumber (Chinese Long) v3	cmocucB0873