BLAST of CmoCh04G002840 vs. Swiss-Prot
Match:
C3H53_ORYSJ (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica GN=Os07g0682400 PE=2 SV=1)
HSP 1 Score: 482.3 bits (1240), Expect = 7.8e-135
Identity = 312/579 (53.89%), Postives = 374/579 (64.59%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD+YEAT++VFSRIQ LDP++A+KIMGFLLIQDHGEKEMIRLAFGPEALLH+V+ K RK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLPSTNSPSTTSS-------SPSPFSLSRQSSS---TSSSRFGINLPPSLTIPSPSSSS 120
LGL + P T +S + SPF LSRQ+S T+ S ++ P S P S +
Sbjct: 61 LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120
Query: 121 VSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPT 180
S + G E+ D LISP N S F G+ ++DE QLQDQL+FLNEG
Sbjct: 121 NSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDP----LMDELQLQDQLAFLNEGGVP 180
Query: 181 IGVKNSDLFFPPVDLSS--SPTGGGFGSYGGDGTWS-GGVVHRRSYSVNDASLGTEDLNS 240
G + P D SP GG G + + W+ GG HRRS SV++ LG D
Sbjct: 181 AGHQ-----MPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGAD--- 240
Query: 241 GLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LLRSKSS 300
GLGWKPCLYYARG+CKNG++CRF+H GL D G PS +E QC + L+RSKS
Sbjct: 241 GLGWKPCLYYARGYCKNGSACRFVHGGLPDDAAGKM---DPSAVEQ--QCQDFLIRSKS- 300
Query: 301 AQQRLAAASQLMASANAFPYSP----KSINFLLQQHQ--SDSQRAAAAALIM--GEDLHK 360
QRLAAA+ + + P SP K ++ LLQQ Q ++SQRAAAAA +M G++ HK
Sbjct: 301 --QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRAAAAAALMLGGDEAHK 360
Query: 361 FSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPY 420
F RLER +F A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPY
Sbjct: 361 FMGRPRLERADF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 420
Query: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDR--D 480
QQKRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK KQ Q D
Sbjct: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQHQPGERVD 480
Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRR 540
FS C TPTGLD+R+ +D QLG+RM NS ++LLRRKLE+Q Q I+L SRR
Sbjct: 481 FSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAIELHSRR 540
Query: 541 LLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNP 546
L+ LQLLD K P FS + T P
Sbjct: 541 LMGLQLLDFKSRAAAAPTPIGNPFSASQTAANATGESPP 554
BLAST of CmoCh04G002840 vs. Swiss-Prot
Match:
C3H22_ORYSJ (Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900 PE=2 SV=2)
HSP 1 Score: 460.7 bits (1184), Expect = 2.4e-128
Identity = 294/547 (53.75%), Postives = 363/547 (66.36%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD+YEAT++VFSRIQ LDP++A+KIMG LLIQDHG+KEMIRLAFGPEALLHSV+ + RK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL------PSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSS----SS 120
L L PS++SP T ++ SPF LSRQ +S R P L+ SPSS
Sbjct: 61 LALLPPPPPPSSSSP-TVPAAHSPFLLSRQ----NSGRGPAPSPSPLSASSPSSWAQAQP 120
Query: 121 VSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTD--MIDEFQLQDQLSFLNEGS 180
S + G E+ + + LISP N G++ + P ++D+FQLQ+QL+FLNEG
Sbjct: 121 FSRSNGSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNEG- 180
Query: 181 PTIGVKNSDLF--FPPVDLSSSPTGGGFGSYG-GDGTWSGGVVHRRSYSVNDASLGTEDL 240
GV S F + S G G G + G G +GG HRRS SVN+ LG
Sbjct: 181 ---GVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGS- 240
Query: 241 NSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LLRSK 300
+ G GWKPCLYYARGFCKNG+SCRF+H A G A + ++ QC + LLRSK
Sbjct: 241 SDGFGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATAE---QQQCQDFLLRSK 300
Query: 301 SSAQQRLAAASQLMASANAFPYSP----KSINFLLQQHQSDSQRAAAAALIM---GEDLH 360
S QRL A+ + + P SP K ++ LLQQ +D+QRAAAAA +M ++ H
Sbjct: 301 S---QRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDEAH 360
Query: 361 KFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIP 420
KF RL+R +F A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIP
Sbjct: 361 KFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIP 420
Query: 421 YQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSP 480
YQQKRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK ++ DFS
Sbjct: 421 YQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKH-QGDFSG 480
Query: 481 CGTPTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRRLLN 517
C TPTGLD R+ +D QLG+RM NS +++LRRKLE+Q Q I+L SRRL++
Sbjct: 481 CTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLMD 525
BLAST of CmoCh04G002840 vs. Swiss-Prot
Match:
C3H23_ORYSJ (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica GN=Os03g0329200 PE=2 SV=1)
HSP 1 Score: 453.8 bits (1166), Expect = 3.0e-126
Identity = 295/581 (50.77%), Postives = 370/581 (63.68%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD+YEAT++VFSRIQ LDP++A+KIMG LLIQDHG+KEMIRLAFGPEALLHSV+ + RK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL----PSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATG 120
L L + +S T ++ SPF LSRQ+S R P S P S S S G
Sbjct: 61 LALLPPPQAASSSPTVPAAHSPFLLSRQNSG----RCPAPSPSSWAQAQPFSRSNSMGNG 120
Query: 121 -FSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTD-----MIDEFQLQDQLSFLNEGSPT 180
+ E+ + + L+SP N G +A P ++D+F+LQ+QL+FL++G+
Sbjct: 121 GAADEMVGAGEELMSPLN---GGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGG 180
Query: 181 IGVKNSDLFFPPVDLSSSPTG--GGFGSYGGDGTWS-GGVVHRRSYSVNDASLGTEDLNS 240
+ ++ F + S G GG YG W+ GG HRRS SVN+ LG +
Sbjct: 181 VNPGHALQAFDGAECRSPGPGESGGMLPYGL--AWANGGPGHRRSASVNELCLGGD---- 240
Query: 241 GLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHE-LLRSKSS 300
G GWKPCLYYARGFCKNG++CRF+H GL D A QC + LLRSKS
Sbjct: 241 GFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAE------QQQCQDFLLRSKS- 300
Query: 301 AQQRLAAASQLMASANAFPYSP----KSINFLLQQHQ--SDSQRAAAAALIM--GEDLHK 360
QRL A+ + P SP K ++ LLQQ Q +D+QRAAAAAL++ G++ HK
Sbjct: 301 --QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAHK 360
Query: 361 FSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPY 420
F RL+R +F A ++NP SRQIYLTFPADSTF+EEDVSNYFS+YGPV DVRIPY
Sbjct: 361 FMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 420
Query: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPC 480
QQKRMFGFVTFVYPETVKLILAKGNPHF+CDARVLVKPYKEKGKVPDK ++Q DF C
Sbjct: 421 QQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFC-C 480
Query: 481 GTPTGLDSRELYDHLQLGSRMFY--NSQQDLLLRRKLEKQ------QADIDLQSRRLLNL 540
+PTGLD+R+ +D QLG+RM NS +L+LRRKLE+Q Q IDL SRRL+ L
Sbjct: 481 MSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGL 540
Query: 541 QLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLI 552
QLLD+K + H P +PI + S P A ++
Sbjct: 541 QLLDLKSSAAVHAAETTTMSLP-TPITNAFTSGQPGATTIV 552
BLAST of CmoCh04G002840 vs. Swiss-Prot
Match:
C3H55_ARATH (Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana GN=At5g12440 PE=2 SV=3)
HSP 1 Score: 378.6 bits (971), Expect = 1.2e-103
Identity = 250/565 (44.25%), Postives = 341/565 (60.35%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGLPSTNSPSTTSSSPSPFS------LSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWA 120
LG+ S NSPS+T +SPSP + L+ + SS S+ PS SS+ W+
Sbjct: 61 LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFRR----NSPSSPSSTSPWS 120
Query: 121 TGFSPELQNSDDHLISPGNLPL----------GSSCFSAGEAPVT---DMIDEFQLQDQL 180
N ++ ISP + P+ G S +G A D++D+ QL D L
Sbjct: 121 FNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCL 180
Query: 181 SFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLG 240
SFL++ K DL P + L S G G +HRRS+S DAS
Sbjct: 181 SFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH-----------LHRRSFSC-DASFV 240
Query: 241 TEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAVGSPSKIEMMDQCHEL 300
+ D G G KPC+Y++RG CKNG SC+F+H G D DG G SP K+E + HE
Sbjct: 241 SGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEE 300
Query: 301 LRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFS 360
+ A Q+ ASQ++ A PY K ++FLLQQH +QR L G++ S
Sbjct: 301 MMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQH---AQR--DGGLPFGDERFWSS 360
Query: 361 RSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQ 420
GRLER E +++ N ASRQIYLTFPADSTFK+EDV+ YFS++G VQDVRIPYQQ
Sbjct: 361 SPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQ 420
Query: 421 KRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK-----QQQIDR-D 480
KRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV DKK QQQI+R +
Sbjct: 421 KRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGN 480
Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD----IDLQSRRLLNL 536
+SPC +P+G+D RE D LGS+M Y ++ ++RRK+E QAD I+L+ RR +NL
Sbjct: 481 YSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QADLLRAIELERRRFINL 530
BLAST of CmoCh04G002840 vs. Swiss-Prot
Match:
C3H46_ARATH (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana GN=At3g51950 PE=1 SV=1)
HSP 1 Score: 299.7 bits (766), Expect = 7.1e-80
Identity = 198/354 (55.93%), Postives = 231/354 (65.25%), Query Frame = 1
Query: 206 GVVHRRSYSVNDASLGTE-DLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAA 265
G VH RS S LG D + G G PC Y+ARGFCKNG SCRF+HS DGG
Sbjct: 125 GSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHS-----DGGADL 184
Query: 266 VGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQR 325
VGSPS+IE LLRS +S RLA M ++ +S K +N Q+D QR
Sbjct: 185 VGSPSRIE-------LLRS-NSVPPRLA--HHFMTRSSLPSFSTKGVNL----QQNDVQR 244
Query: 326 AAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNY 385
AAAA L++G++L K R R ER + S + PASRQIYLTFPADS F+EEDVSNY
Sbjct: 245 AAAA-LMIGDELQKLGR-WRPERIDLS-----AMACPASRQIYLTFPADSRFREEDVSNY 304
Query: 386 FSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVP 445
FS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILAKGNPHFVCD+RVLVKPYKEKGKVP
Sbjct: 305 FSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVP 364
Query: 446 DK--KQQQIDRDFSPCGTPTGLDS--RELYDHLQLGSRMFYNSQQDLLLRRKLEKQQADI 505
DK Q +R+ S PTGLDS R++ LG R FYN+ QD+L R K E++ +
Sbjct: 365 DKYRTNQTTERELS----PTGLDSSPRDV-----LGGRGFYNNTQDVLWRSKFEEE--IL 424
Query: 506 DLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFP 554
+LQSRRL+NLQLLDVKK+ QL P N HSPNPF+Q+LI P
Sbjct: 425 ELQSRRLMNLQLLDVKKHFQLNSPTN--------------IHSPNPFSQSLISP 427
BLAST of CmoCh04G002840 vs. TrEMBL
Match:
A0A0A0KPZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175810 PE=4 SV=1)
HSP 1 Score: 959.1 bits (2478), Expect = 2.4e-276
Identity = 508/591 (85.96%), Postives = 532/591 (90.02%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK +KD
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LGLPSTNSPSTTS---SSPSPF-------SLSRQSSSTSSSRFGINLPPSLTIPSPSS-S 120
L LP+ NSPST S SSPSPF S+SRQSSS SSR GI+LP SLTIPSPSS S
Sbjct: 61 LSLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSSS--SSRLGISLPLSLTIPSPSSSS 120
Query: 121 SVSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSP 180
SVSWA GFS +LQ SDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSP
Sbjct: 121 SVSWAAGFSSDLQTSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSP 180
Query: 181 TIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGL 240
TIGVKN+DLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GL
Sbjct: 181 TIGVKNADLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGL 240
Query: 241 GWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQ 300
GWKPCLY+ARGFCKNGTSCRFLH GLGD+D AAVGSPSKI++M+QCHELLRSKSSAQQ
Sbjct: 241 GWKPCLYFARGFCKNGTSCRFLHGGLGDSDVSAAAVGSPSKIDVMEQCHELLRSKSSAQQ 300
Query: 301 RLAAASQLMASANAFPYSPKSINFLLQQHQSDSQR------AAAAALIMGEDLHKFSRSG 360
RLAAASQLMASAN+FPYSPKSINFLLQQ Q+DSQR AAAAAL+MGEDLHKFSRS
Sbjct: 301 RLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAAAAALMMGEDLHKFSRSS 360
Query: 361 RLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM 420
RLERNEFSLNGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM
Sbjct: 361 RLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM 420
Query: 421 FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTP 480
FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK KQQQIDRDFSPCGTP
Sbjct: 421 FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTP 480
Query: 481 TGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKN 540
TGLDSRELYDHLQLGSRMFYNS QDLL RRKLE+QQAD +DLQSRRLLNLQLLDVKKN
Sbjct: 481 TGLDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKN 540
Query: 541 QLPHPYNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILR 569
QLPH +HHRA S GSPIPSPTHSPNP FAQNLIFP+IRS+ S S SDILR
Sbjct: 541 QLPH--HHHRALSTGSPIPSPTHSPNPLFAQNLIFPSIRSSGSNSTSDILR 587
BLAST of CmoCh04G002840 vs. TrEMBL
Match:
A0A0S3SEK5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G258100 PE=4 SV=1)
HSP 1 Score: 737.6 bits (1903), Expect = 1.1e-209
Identity = 414/581 (71.26%), Postives = 464/581 (79.86%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD YEATRIVF+RIQNLDPENASKIMG LL+QDHGEKEMIRLAFGPEAL+HSVILK RK+
Sbjct: 1 MDGYEATRIVFARIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
LGLPS NSP T S+ PSP + SSTSS GINLPP+LTIP+PSS++ SW T E
Sbjct: 61 LGLPS-NSPPTPSTPPSPSPFLSRQSSTSSRLGGINLPPALTIPNPSSTTSSWPT--MSE 120
Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPV-----TDMIDEFQLQDQLSFLNEGSPTIGV-- 180
LQ D L+SP +L +GSS S+ P +D ID+FQLQDQLSFLN+GSPT
Sbjct: 121 LQTPDG-LMSPNHLVVGSST-SSSSLPFYVNGGSDPIDDFQLQDQLSFLNDGSPTSAALA 180
Query: 181 --KNSDLFFPP-VDLSSSPTGGG----FGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLN 240
N DLF+P D+SSSPTG F SYG W GG +HRRS SVNDA LG+ED N
Sbjct: 181 HKSNPDLFYPTHSDMSSSPTGVADPALFPSYG----W-GGSLHRRSCSVNDACLGSEDPN 240
Query: 241 SGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSS 300
SGLGWKPCLY+ARG+CKNGTSCRFLH GLGDADG A VGSPSKIEMM+QCHEL RSKSS
Sbjct: 241 SGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADGAAAMVGSPSKIEMMEQCHELFRSKSS 300
Query: 301 AQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLE 360
Q RLAAASQLM S FPYSPK +N LLQQ Q+D+QRAAAAAL+M EDLHKF RS RLE
Sbjct: 301 QQHRLAAASQLMGSPT-FPYSPKCMNLLLQQQQNDTQRAAAAALMMSEDLHKFGRS-RLE 360
Query: 361 RNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
RN+FSLN S G+VNPASRQIYLTFPADSTF+EEDVSNYFS+YGPVQDVRIPYQQKRMFGF
Sbjct: 361 RNDFSLN-SPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 420
Query: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDR-DFSPCGTPTGLD 480
VTFVYPETVKLIL+KGNPHFVCDARVLVKPYKEKGKVPDKKQQQ+DR DFSPCGTPTGL+
Sbjct: 421 VTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQQQVDRGDFSPCGTPTGLE 480
Query: 481 SRELYDHLQLGSRMFYNSQQDLLLRRKLEKQ---QADIDLQSRRLLNLQLLDVKKNQLPH 540
+R+ +D LQLG RMFYN+ QD+L RRKLE+Q Q ++LQSRRL+ LQLLD+KK
Sbjct: 481 ARDQFD-LQLGGRMFYNT-QDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKK----- 540
Query: 541 PYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSN 564
+H RA S GSPIPSPTHSPN F QNL+ P+ ++S N
Sbjct: 541 --HHQRALSTGSPIPSPTHSPNMFNQNLVLPSFHTSSEAQN 559
BLAST of CmoCh04G002840 vs. TrEMBL
Match:
A0A0L9V829_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g204800 PE=4 SV=1)
HSP 1 Score: 737.6 bits (1903), Expect = 1.1e-209
Identity = 414/581 (71.26%), Postives = 464/581 (79.86%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD YEATRIVF+RIQNLDPENASKIMG LL+QDHGEKEMIRLAFGPEAL+HSVILK RK+
Sbjct: 1 MDGYEATRIVFARIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
LGLPS NSP T S+ PSP + SSTSS GINLPP+LTIP+PSS++ SW T E
Sbjct: 61 LGLPS-NSPPTPSTPPSPSPFLSRQSSTSSRLGGINLPPALTIPNPSSTTSSWPT--MSE 120
Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPV-----TDMIDEFQLQDQLSFLNEGSPTIGV-- 180
LQ D L+SP +L +GSS S+ P +D ID+FQLQDQLSFLN+GSPT
Sbjct: 121 LQTPDG-LMSPNHLVVGSST-SSSSLPFYVNGGSDPIDDFQLQDQLSFLNDGSPTSAALA 180
Query: 181 --KNSDLFFPP-VDLSSSPTGGG----FGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLN 240
N DLF+P D+SSSPTG F SYG W GG +HRRS SVNDA LG+ED N
Sbjct: 181 HKSNPDLFYPTHSDMSSSPTGVADPALFPSYG----W-GGSLHRRSCSVNDACLGSEDPN 240
Query: 241 SGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSS 300
SGLGWKPCLY+ARG+CKNGTSCRFLH GLGDADG A VGSPSKIEMM+QCHEL RSKSS
Sbjct: 241 SGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADGAAAMVGSPSKIEMMEQCHELFRSKSS 300
Query: 301 AQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLE 360
Q RLAAASQLM S FPYSPK +N LLQQ Q+D+QRAAAAAL+M EDLHKF RS RLE
Sbjct: 301 QQHRLAAASQLMGSPT-FPYSPKCMNLLLQQQQNDTQRAAAAALMMSEDLHKFGRS-RLE 360
Query: 361 RNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
RN+FSLN S G+VNPASRQIYLTFPADSTF+EEDVSNYFS+YGPVQDVRIPYQQKRMFGF
Sbjct: 361 RNDFSLN-SPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 420
Query: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDR-DFSPCGTPTGLD 480
VTFVYPETVKLIL+KGNPHFVCDARVLVKPYKEKGKVPDKKQQQ+DR DFSPCGTPTGL+
Sbjct: 421 VTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQQQVDRGDFSPCGTPTGLE 480
Query: 481 SRELYDHLQLGSRMFYNSQQDLLLRRKLEKQ---QADIDLQSRRLLNLQLLDVKKNQLPH 540
+R+ +D LQLG RMFYN+ QD+L RRKLE+Q Q ++LQSRRL+ LQLLD+KK
Sbjct: 481 ARDQFD-LQLGGRMFYNT-QDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKK----- 540
Query: 541 PYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSN 564
+H RA S GSPIPSPTHSPN F QNL+ P+ ++S N
Sbjct: 541 --HHQRALSTGSPIPSPTHSPNMFNQNLVLPSFHTSSEAQN 559
BLAST of CmoCh04G002840 vs. TrEMBL
Match:
V7AH88_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G0138001g PE=4 SV=1)
HSP 1 Score: 733.4 bits (1892), Expect = 2.2e-208
Identity = 420/579 (72.54%), Postives = 470/579 (81.17%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD YEATRIVF+RIQNLDPENASKIMG LL+QDHGEKEMIRLAFGPEAL+HSVILK RK+
Sbjct: 1 MDGYEATRIVFARIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLPSTNSPS-TTSSSPSPFSLSRQSSSTSSSRFG-INLPPSLTIPSPSSSSVSWATGFS 120
LGLPS + P+ +T SPSPF LSRQSS +SSR G INLPP+LTIP+PSS SW S
Sbjct: 61 LGLPSNSPPTPSTPPSPSPF-LSRQSS--ASSRLGAINLPPALTIPNPSS---SWPPTMS 120
Query: 121 PELQNSDDHLISPGNLPLGSSCFSAGEAPV-----TDMIDEFQLQDQLSFLNEGSPTIGV 180
ELQ + D L+SP +L +GSS S+ P +D ID+FQLQDQLSFLN+GSPT V
Sbjct: 121 -ELQ-TPDGLMSPNHLVVGSST-SSSSLPFYVNGGSDSIDDFQLQDQLSFLNDGSPTSTV 180
Query: 181 ----KNSDLFFPP-VDLSSSPTGGG----FGSYGGDGTWSGGVVHRRSYSVNDASLGTED 240
N DLF+P DLSSSPTG F SYG W GG +HRRS SVNDA LG+ED
Sbjct: 181 LAHKNNPDLFYPTHSDLSSSPTGVADPALFPSYG----W-GGSLHRRSCSVNDACLGSED 240
Query: 241 LNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSK 300
NSGLGWKPCLY+ARG+CKNGTSCRFLH GLGDADG A VGSPSKIEMM+QCHEL RSK
Sbjct: 241 PNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADGPAAMVGSPSKIEMMEQCHELFRSK 300
Query: 301 SSAQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGR 360
SS Q RLAAASQLMAS + FPYSPK +N LLQQ Q+D+QRAAAAAL+M EDLHKF RS R
Sbjct: 301 SSQQHRLAAASQLMAS-STFPYSPKCMNLLLQQQQNDTQRAAAAALMMSEDLHKFGRS-R 360
Query: 361 LERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMF 420
LERN+FSLN S G+VNPASRQIYLTFPADSTF+EEDVSNYFS+YGPVQDVRIPYQQKRMF
Sbjct: 361 LERNDFSLN-SPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF 420
Query: 421 GFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDR-DFSPCGTPTG 480
GFVTFVYPETVKLIL+KGNPHFVCDARVLVKPYKEKGKVPDKKQQQ+DR DFSPCGTPTG
Sbjct: 421 GFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQQQVDRGDFSPCGTPTG 480
Query: 481 LDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQ---QADIDLQSRRLLNLQLLDVKKNQL 540
LD+R+ +D LQLG RMFYN+ QD+L RRKLE+Q Q ++LQSRRL+ LQLLD+KK
Sbjct: 481 LDARDQFD-LQLGGRMFYNT-QDMLWRRKLEEQADLQHALELQSRRLMGLQLLDIKK--- 540
Query: 541 PHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSAS 560
+H RA S GSPIPSPTHSPN F QNL+ P+ ++S
Sbjct: 541 ----HHQRALSTGSPIPSPTHSPNMFNQNLVLPSFHTSS 553
BLAST of CmoCh04G002840 vs. TrEMBL
Match:
K7LSD6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)
HSP 1 Score: 720.7 bits (1859), Expect = 1.4e-204
Identity = 413/571 (72.33%), Postives = 460/571 (80.56%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD YEATRIVFSRIQNLDPENASKIMG LL+QDHGEKEMIRLAFGPEAL+HSVILK RK+
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLPSTNSPS-TTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSP 120
LGLPS + P+ +T SPSPF +SRQ+ +TSS G N+PP+LTIP+PSS W T
Sbjct: 61 LGLPSNSPPTPSTPPSPSPF-ISRQNLNTSSRLSGTNIPPALTIPNPSS----WPT--MS 120
Query: 121 ELQNSDDHLISPGNLPLGSSCFSAG----EAPVTDMIDEFQLQDQLSFLNEGSPTIGV-- 180
ELQ DD L+SP +L +GSS S +D IDEFQLQDQL+FLN+GSPT
Sbjct: 121 ELQTPDD-LMSPNHLVVGSSTSSLSLPFYANGGSDPIDEFQLQDQLAFLNDGSPTSTALS 180
Query: 181 --KNSDLFFPP-VDLSSSPTGGG----FGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLN 240
N D+F+P DLSSSPT F SYG W GG +HRRS SVNDA LGTED N
Sbjct: 181 HKNNPDMFYPSNSDLSSSPTTAADPTLFPSYG----W-GGSLHRRSCSVNDACLGTEDPN 240
Query: 241 SGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSS 300
SGLGWKPCLY+ARG+CKNGTSCRFLH GLGDAD A VGSPSKIEMM+QCHELLRSKS
Sbjct: 241 SGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADA--AMVGSPSKIEMMEQCHELLRSKSG 300
Query: 301 AQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLE 360
QQRLAAASQLMAS+ FPYSPK +NFLLQQ Q+D+QRAAAAAL+M EDLHKF RS RLE
Sbjct: 301 QQQRLAAASQLMASST-FPYSPKCMNFLLQQQQNDTQRAAAAALMMSEDLHKFGRS-RLE 360
Query: 361 RNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
RN+FSLN S G+VNPASRQIYLTFPADSTF+EEDVSNYFS+YGPVQDVRIPYQQKRMFGF
Sbjct: 361 RNDFSLN-SPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 420
Query: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK--QQQIDR-DFSPCGTPTG 480
VTFVYPETVKLIL+KGNPHFVCDARVLVKPYKEKGKVPDKK QQQ+DR DFSPCGTPTG
Sbjct: 421 VTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQQQQVDRGDFSPCGTPTG 480
Query: 481 LDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQ---QADIDLQSRRLLNLQLLDVKKNQL 540
LD+R+ +D LQLGSRMFYN+ QD+L RRKLE+Q Q ++LQSRRL+ LQLLD+KK
Sbjct: 481 LDARDQFD-LQLGSRMFYNT-QDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKK--- 540
Query: 541 PHPYNHHRAFSPGSPIPSPTHSPNPFAQNLI 552
+H RA S GSPIPSPTHSPN F QNL+
Sbjct: 541 ----HHQRALSAGSPIPSPTHSPNMFNQNLV 544
BLAST of CmoCh04G002840 vs. TAIR10
Match:
AT5G12440.1 (AT5G12440.1 CCCH-type zinc fingerfamily protein with RNA-binding domain)
HSP 1 Score: 378.6 bits (971), Expect = 6.8e-105
Identity = 250/565 (44.25%), Postives = 341/565 (60.35%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDS +AT ++ ++I++L+P+ A KI+G+LL+ D G+++++ LA GPE++L S I K +
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGLPSTNSPSTTSSSPSPFS------LSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWA 120
LG+ S NSPS+T +SPSP + L+ + SS S+ PS SS+ W+
Sbjct: 61 LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFRR----NSPSSPSSTSPWS 120
Query: 121 TGFSPELQNSDDHLISPGNLPL----------GSSCFSAGEAPVT---DMIDEFQLQDQL 180
N ++ ISP + P+ G S +G A D++D+ QL D L
Sbjct: 121 FNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCL 180
Query: 181 SFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLG 240
SFL++ K DL P + L S G G +HRRS+S DAS
Sbjct: 181 SFLDDSCS----KTEDLVDPSIPLDYSVDGDGETH-----------LHRRSFSC-DASFV 240
Query: 241 TEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGD-ADGGGAAVGSPSKIEMMDQCHEL 300
+ D G G KPC+Y++RG CKNG SC+F+H G D DG G SP K+E + HE
Sbjct: 241 SGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEE 300
Query: 301 LRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFS 360
+ A Q+ ASQ++ A PY K ++FLLQQH +QR L G++ S
Sbjct: 301 MMRLKLAYQQQRLASQILGRAPQLPYE-KRMDFLLQQH---AQR--DGGLPFGDERFWSS 360
Query: 361 RSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQ 420
GRLER E +++ N ASRQIYLTFPADSTFK+EDV+ YFS++G VQDVRIPYQQ
Sbjct: 361 SPGRLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQ 420
Query: 421 KRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKK-----QQQIDR-D 480
KRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV DKK QQQI+R +
Sbjct: 421 KRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGN 480
Query: 481 FSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD----IDLQSRRLLNL 536
+SPC +P+G+D RE D LGS+M Y ++ ++RRK+E QAD I+L+ RR +NL
Sbjct: 481 YSPCSSPSGIDPREQSD-FHLGSKMLYERRE--MMRRKIE--QADLLRAIELERRRFINL 530
BLAST of CmoCh04G002840 vs. TAIR10
Match:
AT3G21100.2 (AT3G21100.2 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 332.0 bits (850), Expect = 7.3e-91
Identity = 235/551 (42.65%), Postives = 318/551 (57.71%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD + T I+F++I+ L+P+ ASKI+G+LL+QD G+ +++RLA GPE LL SV LK +
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LGLPSTNSPSTTSSS---PSPFSLSRQSSSTSSSRFGIN---LPPSLTIPSPSSSSVSWA 120
LGL S S S +S P ++ R S S SS G + L PS P S+ +
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSPSFATPGSLGSNPNM- 120
Query: 121 TGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVT-DMIDEFQLQDQLSFLNEGSPTIGV 180
S Q S S G +AG++ D +DE QL + LSFLNE S
Sbjct: 121 --ISSPFQASSSLFASDGA--------AAGDSTGNGDFLDEQQLGNYLSFLNESSS---- 180
Query: 181 KNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGWKP 240
KN+D P GF + GD +H+RS+S +DA G+E+ G
Sbjct: 181 KNNDESLDPF---------GFSADNGDAH-----LHKRSFSASDACFGSEEPGFG----- 240
Query: 241 CLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQRLAA 300
G RFLH GLGD GSP + + E++R K + +QR+AA
Sbjct: 241 ----------GGGYNRFLHGGLGDDFDSPGGFGSPDYVSRQQE--EIVRMKMAQRQRMAA 300
Query: 301 ASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEFSLN 360
A L A+ + Y K +NFLL HQ ++ R+ A GE+ + F GR ER+EF
Sbjct: 301 AQYLAATGSPMSYE-KGLNFLL--HQRNAHRSGAGQ--FGEEGYWFGSPGRHERDEFM-- 360
Query: 361 GSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPE 420
G N AS+QIYLTFPADS+F +EDVSNYF +GPVQDVRIPYQQKRMFGFVTF++ E
Sbjct: 361 GMGDKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSE 420
Query: 421 TVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQ-----QQIDR-DFSPCGTPTGLDSR 480
TV++ILA+GNPHF+CD+RVLVKPYKEKG++ +K+Q QQ++R +FSP +P+G+DSR
Sbjct: 421 TVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPGSSPSGMDSR 480
Query: 481 ELYDHLQLGSRMFYNSQQDLLLRRKLEKQ--QADIDLQSRRLLNLQLLDVKKNQLPHPYN 537
+L+D L RMF N+Q+ ++RRK E+ Q I+ Q RR L+LQL D+ H
Sbjct: 481 DLFDS-HLAPRMFSNTQE--MMRRKAEQADLQQAIEFQRRRFLSLQLPDMDSESFLH--- 492
BLAST of CmoCh04G002840 vs. TAIR10
Match:
AT3G51950.1 (AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein)
HSP 1 Score: 299.7 bits (766), Expect = 4.0e-81
Identity = 198/354 (55.93%), Postives = 231/354 (65.25%), Query Frame = 1
Query: 206 GVVHRRSYSVNDASLGTE-DLNSGLGWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAA 265
G VH RS S LG D + G G PC Y+ARGFCKNG SCRF+HS DGG
Sbjct: 125 GSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHS-----DGGADL 184
Query: 266 VGSPSKIEMMDQCHELLRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQR 325
VGSPS+IE LLRS +S RLA M ++ +S K +N Q+D QR
Sbjct: 185 VGSPSRIE-------LLRS-NSVPPRLA--HHFMTRSSLPSFSTKGVNL----QQNDVQR 244
Query: 326 AAAAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNY 385
AAAA L++G++L K R R ER + S + PASRQIYLTFPADS F+EEDVSNY
Sbjct: 245 AAAA-LMIGDELQKLGR-WRPERIDLS-----AMACPASRQIYLTFPADSRFREEDVSNY 304
Query: 386 FSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVP 445
FS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILAKGNPHFVCD+RVLVKPYKEKGKVP
Sbjct: 305 FSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVP 364
Query: 446 DK--KQQQIDRDFSPCGTPTGLDS--RELYDHLQLGSRMFYNSQQDLLLRRKLEKQQADI 505
DK Q +R+ S PTGLDS R++ LG R FYN+ QD+L R K E++ +
Sbjct: 365 DKYRTNQTTERELS----PTGLDSSPRDV-----LGGRGFYNNTQDVLWRSKFEEE--IL 424
Query: 506 DLQSRRLLNLQLLDVKKN-QLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFP 554
+LQSRRL+NLQLLDVKK+ QL P N HSPNPF+Q+LI P
Sbjct: 425 ELQSRRLMNLQLLDVKKHFQLNSPTN--------------IHSPNPFSQSLISP 427
BLAST of CmoCh04G002840 vs. TAIR10
Match:
AT1G51520.2 (AT1G51520.2 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 216.9 bits (551), Expect = 3.4e-56
Identity = 193/586 (32.94%), Postives = 273/586 (46.59%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MD + T I+FS+I+ + ENAS+++ + L+QD ++++IR+AFGP++L+ + K + D
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLPSTNSPSTTSSSPSPFSLSRQSSSTSSSRFGINLPPSLTIPSPSSSSVSWATGFSPE 120
LG S G + P + I S SS S GF
Sbjct: 61 LGFSSN---------------------------GFSRP--INIHGQSLSSSSPRNGFLEF 120
Query: 121 LQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSPTIGVKNSDLFF 180
+N P N PL SS L+ L + P NS F
Sbjct: 121 SRN-------PSN-PLSSSL-------------------TLNTLRDNKPNF---NSSPFR 180
Query: 181 PPVDLSSSPTG---------GGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGLGW 240
L +S +G F + ++ H+RS+S NDA +E+ G
Sbjct: 181 ESSSLFASSSGDEQQQQQFSNNFLFTNDEDPFANS--HKRSFSANDACFESEEPWFG--- 240
Query: 241 KPCLYYARGFCKNGTSC-RFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQR 300
G C +F GL D G GSPS+++ M ++R K AQQ+
Sbjct: 241 ------------GGNGCHQFPQGGLVDGFGSSGVFGSPSEMDYM--LEGMMRMKL-AQQK 300
Query: 301 LAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHKFSRSGRLERNEF 360
A+Q MA+ SP +L +H S GE+ + GR ER +
Sbjct: 301 SMVAAQFMAACG----SP-----MLHRHGSGH---------FGEECGNYFSQGRHERED- 360
Query: 361 SLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFV 420
S+QIYLTFP++S+F +EDVS YF +G V DVRIPYQQ+RM+GFVTF
Sbjct: 361 ----------SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFA 420
Query: 421 YPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQ-----IDR-DFSPCGTPTGL 480
ETV+ ILA+GNPHF+CD+RVLVKPYKEKGK+ K+QQQ ++R ++SP +P+G
Sbjct: 421 KAETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSGK 443
Query: 481 DSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKKNQLPHPY 540
DSRELY+ +LG RMF Q+ +LRRK E QAD+
Sbjct: 481 DSRELYE-CRLGPRMFSKKTQE-MLRRKTE--QADL------------------------ 443
Query: 541 NHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSASSCSNSDILRGE 571
A I SP+H P F +L+F S +N +I+ G+
Sbjct: 541 --QHAIERSPSIGSPSHFPPRFNHSLLF-----QSGNNNEEIMEGD 443
BLAST of CmoCh04G002840 vs. TAIR10
Match:
AT3G63450.3 (AT3G63450.3 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 213.8 bits (543), Expect = 2.9e-55
Identity = 131/239 (54.81%), Postives = 158/239 (66.11%), Query Frame = 1
Query: 279 ELLRSKSSAQQRLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAALIMGEDLHK 338
E+LRS S +L +P+SPK +N QS++QRAAA L+MG+DLHK
Sbjct: 89 EVLRSNS-------VPPRLANQFTGYPFSPKGVNL----QQSEAQRAAA--LMMGDDLHK 148
Query: 339 FSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPY 398
R ER + S PASRQIYLTFPADS F+EEDVS+YFS +GPVQDVRIPY
Sbjct: 149 LG-IWRPERIDLSATAC-----PASRQIYLTFPADSIFREEDVSDYFSTFGPVQDVRIPY 208
Query: 399 QQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPC 458
QQKRMFGFVTF+YPETVK ILAKGNPHFVC +RVLVKPYKEKGKVPDK + + RD
Sbjct: 209 QQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKYRTKPSRDIM-- 268
Query: 459 GTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQADIDLQSRRLLNLQLLDVKK 518
QLG R F+ +DLL +R+ E++ ++LQS RL+NLQLLDV+K
Sbjct: 269 -------------DFQLGGRAFH---EDLLWKRRFEERA--LELQSTRLMNLQLLDVEK 288
BLAST of CmoCh04G002840 vs. NCBI nr
Match:
gi|659090160|ref|XP_008445868.1| (PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X2 [Cucumis melo])
HSP 1 Score: 971.8 bits (2511), Expect = 5.2e-280
Identity = 510/586 (87.03%), Postives = 533/586 (90.96%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK RKD
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKARKD 60
Query: 61 LGLPSTNSPSTTS---SSPSPF-------SLSRQSSSTSSSRFGINLPPSLTIPSPSSSS 120
L LP+ NSPST S SSPSPF S+SRQSSS SSR GI+LP SLTIPSPSSSS
Sbjct: 61 LNLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSSS--SSRLGISLPLSLTIPSPSSSS 120
Query: 121 -VSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSP 180
VSWA GFS +LQNSDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSP
Sbjct: 121 AVSWAAGFSSDLQNSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSP 180
Query: 181 TIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGL 240
TIGVKNSDLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GL
Sbjct: 181 TIGVKNSDLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGL 240
Query: 241 GWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQ 300
GWKPCLYYARGFCKNGTSCRFLH GLGD+D AAVGSPSK++MM+QCHELLRSKSSAQQ
Sbjct: 241 GWKPCLYYARGFCKNGTSCRFLHGGLGDSDASAAAVGSPSKMDMMEQCHELLRSKSSAQQ 300
Query: 301 RLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAA---LIMGEDLHKFSRSGRLE 360
RLAAASQLMASAN+FPYSPKSINFLLQQ Q+DSQRAAAAA L+MGEDLHKFSRS RLE
Sbjct: 301 RLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAALMMGEDLHKFSRSSRLE 360
Query: 361 RNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
RNEFS+NGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF
Sbjct: 361 RNEFSMNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
Query: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDS 480
VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDS
Sbjct: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTGLDS 480
Query: 481 RELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKNQLPHP 540
RELYDHLQLGSRMFYN+ QDLL RRKLE+QQAD +DLQSRRLLNLQLLDVKKNQLPH
Sbjct: 481 RELYDHLQLGSRMFYNTHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQLPH- 540
Query: 541 YNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILR 569
++HHRA S GSPIPSPTHSPNP FAQNLIFP IRS+ S S SDILR
Sbjct: 541 HHHHRALSTGSPIPSPTHSPNPLFAQNLIFPGIRSSGSSSTSDILR 583
BLAST of CmoCh04G002840 vs. NCBI nr
Match:
gi|659090158|ref|XP_008445867.1| (PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X1 [Cucumis melo])
HSP 1 Score: 966.8 bits (2498), Expect = 1.7e-278
Identity = 510/588 (86.73%), Postives = 533/588 (90.65%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK RKD
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKARKD 60
Query: 61 LGLPSTNSPSTTS---SSPSPF-------SLSRQSSSTSSSRFGINLPPSLTIPSPSSSS 120
L LP+ NSPST S SSPSPF S+SRQSSS SSR GI+LP SLTIPSPSSSS
Sbjct: 61 LNLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSSS--SSRLGISLPLSLTIPSPSSSS 120
Query: 121 -VSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSP 180
VSWA GFS +LQNSDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSP
Sbjct: 121 AVSWAAGFSSDLQNSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSP 180
Query: 181 TIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGL 240
TIGVKNSDLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GL
Sbjct: 181 TIGVKNSDLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGL 240
Query: 241 GWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQ 300
GWKPCLYYARGFCKNGTSCRFLH GLGD+D AAVGSPSK++MM+QCHELLRSKSSAQQ
Sbjct: 241 GWKPCLYYARGFCKNGTSCRFLHGGLGDSDASAAAVGSPSKMDMMEQCHELLRSKSSAQQ 300
Query: 301 RLAAASQLMASANAFPYSPKSINFLLQQHQSDSQRAAAAA---LIMGEDLHKFSRSGRLE 360
RLAAASQLMASAN+FPYSPKSINFLLQQ Q+DSQRAAAAA L+MGEDLHKFSRS RLE
Sbjct: 301 RLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAALMMGEDLHKFSRSSRLE 360
Query: 361 RNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
RNEFS+NGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF
Sbjct: 361 RNEFSMNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGF 420
Query: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTPTGL 480
VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK KQQQIDRDFSPCGTPTGL
Sbjct: 421 VTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTPTGL 480
Query: 481 DSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKNQLP 540
DSRELYDHLQLGSRMFYN+ QDLL RRKLE+QQAD +DLQSRRLLNLQLLDVKKNQLP
Sbjct: 481 DSRELYDHLQLGSRMFYNTHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQLP 540
Query: 541 HPYNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILR 569
H ++HHRA S GSPIPSPTHSPNP FAQNLIFP IRS+ S S SDILR
Sbjct: 541 H-HHHHRALSTGSPIPSPTHSPNPLFAQNLIFPGIRSSGSSSTSDILR 585
BLAST of CmoCh04G002840 vs. NCBI nr
Match:
gi|778700740|ref|XP_011654910.1| (PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X2 [Cucumis sativus])
HSP 1 Score: 964.1 bits (2491), Expect = 1.1e-277
Identity = 508/589 (86.25%), Postives = 532/589 (90.32%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK +KD
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LGLPSTNSPSTTS---SSPSPF-------SLSRQSSSTSSSRFGINLPPSLTIPSPSS-S 120
L LP+ NSPST S SSPSPF S+SRQSSS SSR GI+LP SLTIPSPSS S
Sbjct: 61 LSLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSSS--SSRLGISLPLSLTIPSPSSSS 120
Query: 121 SVSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSP 180
SVSWA GFS +LQ SDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSP
Sbjct: 121 SVSWAAGFSSDLQTSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSP 180
Query: 181 TIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGL 240
TIGVKN+DLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GL
Sbjct: 181 TIGVKNADLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGL 240
Query: 241 GWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQ 300
GWKPCLY+ARGFCKNGTSCRFLH GLGD+D AAVGSPSKI++M+QCHELLRSKSSAQQ
Sbjct: 241 GWKPCLYFARGFCKNGTSCRFLHGGLGDSDVSAAAVGSPSKIDVMEQCHELLRSKSSAQQ 300
Query: 301 RLAAASQLMASANAFPYSPKSINFLLQQHQSDSQR------AAAAALIMGEDLHKFSRSG 360
RLAAASQLMASAN+FPYSPKSINFLLQQ Q+DSQR AAAAAL+MGEDLHKFSRS
Sbjct: 301 RLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAAAAALMMGEDLHKFSRSS 360
Query: 361 RLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM 420
RLERNEFSLNGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM
Sbjct: 361 RLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM 420
Query: 421 FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTG 480
FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTG
Sbjct: 421 FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQIDRDFSPCGTPTG 480
Query: 481 LDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKNQL 540
LDSRELYDHLQLGSRMFYNS QDLL RRKLE+QQAD +DLQSRRLLNLQLLDVKKNQL
Sbjct: 481 LDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQL 540
Query: 541 PHPYNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILR 569
PH +HHRA S GSPIPSPTHSPNP FAQNLIFP+IRS+ S S SDILR
Sbjct: 541 PH--HHHRALSTGSPIPSPTHSPNPLFAQNLIFPSIRSSGSNSTSDILR 585
BLAST of CmoCh04G002840 vs. NCBI nr
Match:
gi|778700732|ref|XP_011654907.1| (PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X1 [Cucumis sativus])
HSP 1 Score: 959.1 bits (2478), Expect = 3.5e-276
Identity = 508/591 (85.96%), Postives = 532/591 (90.02%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDSYEA+RIVFSRIQNLDPENASKIMG LLIQDHGEKEMIRLAFGPEALLHSVILK +KD
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LGLPSTNSPSTTS---SSPSPF-------SLSRQSSSTSSSRFGINLPPSLTIPSPSS-S 120
L LP+ NSPST S SSPSPF S+SRQSSS SSR GI+LP SLTIPSPSS S
Sbjct: 61 LSLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSSS--SSRLGISLPLSLTIPSPSSSS 120
Query: 121 SVSWATGFSPELQNSDDHLISPGNLPLGSSCFSAGEAPVTDMIDEFQLQDQLSFLNEGSP 180
SVSWA GFS +LQ SDDHLISPGNLPLGSSCF+AG AP +DMIDEFQLQDQLSFLN+GSP
Sbjct: 121 SVSWAAGFSSDLQTSDDHLISPGNLPLGSSCFAAGGAPASDMIDEFQLQDQLSFLNDGSP 180
Query: 181 TIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDGTWSGGVVHRRSYSVNDASLGTEDLNSGL 240
TIGVKN+DLFFPP DLSSSPTGGGFGSYGGD TW GG VHRRS SVNDA LGTEDLN GL
Sbjct: 181 TIGVKNADLFFPPADLSSSPTGGGFGSYGGDATWGGGPVHRRSCSVNDACLGTEDLNCGL 240
Query: 241 GWKPCLYYARGFCKNGTSCRFLHSGLGDADGGGAAVGSPSKIEMMDQCHELLRSKSSAQQ 300
GWKPCLY+ARGFCKNGTSCRFLH GLGD+D AAVGSPSKI++M+QCHELLRSKSSAQQ
Sbjct: 241 GWKPCLYFARGFCKNGTSCRFLHGGLGDSDVSAAAVGSPSKIDVMEQCHELLRSKSSAQQ 300
Query: 301 RLAAASQLMASANAFPYSPKSINFLLQQHQSDSQR------AAAAALIMGEDLHKFSRSG 360
RLAAASQLMASAN+FPYSPKSINFLLQQ Q+DSQR AAAAAL+MGEDLHKFSRS
Sbjct: 301 RLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAAAAALMMGEDLHKFSRSS 360
Query: 361 RLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM 420
RLERNEFSLNGSAGI+NPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM
Sbjct: 361 RLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRM 420
Query: 421 FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQIDRDFSPCGTP 480
FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK KQQQIDRDFSPCGTP
Sbjct: 421 FGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQIDRDFSPCGTP 480
Query: 481 TGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQQAD---IDLQSRRLLNLQLLDVKKN 540
TGLDSRELYDHLQLGSRMFYNS QDLL RRKLE+QQAD +DLQSRRLLNLQLLDVKKN
Sbjct: 481 TGLDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKN 540
Query: 541 QLPHPYNHHRAFSPGSPIPSPTHSPNP-FAQNLIFPTIRSASSCSNSDILR 569
QLPH +HHRA S GSPIPSPTHSPNP FAQNLIFP+IRS+ S S SDILR
Sbjct: 541 QLPH--HHHRALSTGSPIPSPTHSPNPLFAQNLIFPSIRSSGSNSTSDILR 587
BLAST of CmoCh04G002840 vs. NCBI nr
Match:
gi|1009129700|ref|XP_015881906.1| (PREDICTED: zinc finger CCCH domain-containing protein 53 [Ziziphus jujuba])
HSP 1 Score: 747.3 bits (1928), Expect = 2.1e-212
Identity = 427/601 (71.05%), Postives = 480/601 (79.87%), Query Frame = 1
Query: 1 MDSYEATRIVFSRIQNLDPENASKIMGFLLIQDHGEKEMIRLAFGPEALLHSVILKTRKD 60
MDSYEATRIVFSRIQ+LDPENASKIMG LLIQDHGEKEMIRLAFGPEAL+HSVILK RKD
Sbjct: 1 MDSYEATRIVFSRIQSLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKD 60
Query: 61 LGLPSTNSPST--TSSSPSPF------SLSRQSSSTSSSRFG------INLPPSLTIPSP 120
LGLPS NSPST T SSPSPF ++SRQ+SS+SSSR INLPPSLTIP+P
Sbjct: 61 LGLPS-NSPSTPSTPSSPSPFLSSNPIAISRQNSSSSSSRLSNNGGANINLPPSLTIPNP 120
Query: 121 SSSSVSWATGFSPELQNSDDHLISPGNLPLG---SSCFSAGEAP-----VTDMIDEFQLQ 180
SSSS S + ELQN D LISP NLPLG SS ++ P V D++D+FQLQ
Sbjct: 121 SSSSSSASWAALSELQNQTD-LISPNNLPLGPSSSSSMNSASLPYYGNGVNDVMDDFQLQ 180
Query: 181 DQLSFLNEGSPTIGVKNSDLFFPPVDLSSSPTGGGFGSYGGDG--TWSGGVVHRRSYSVN 240
DQLSFLN+GSPT+G KN DLF+P DLSSSPT GG S G W GG +HRRS SV+
Sbjct: 181 DQLSFLNDGSPTLGPKNPDLFYPQQDLSSSPTNGGLDSMGFSSYANW-GGSLHRRSCSVS 240
Query: 241 DASLGTEDLNSGLGWKPCLYYARGFCKNGTSCRFLHSG-LGDA--------DGGGAAVGS 300
D LG+ED NSGLGWKPCLYYARG+CKNGTSCRFLH G LGD+ DG A VGS
Sbjct: 241 DVCLGSEDPNSGLGWKPCLYYARGYCKNGTSCRFLHGGGLGDSSTAAMVGSDGCSAVVGS 300
Query: 301 PSKIEMMDQCHELLRSKSSAQQRLAAASQLMA-SANAFPYSPKSINFLLQQHQSDSQRAA 360
PSK++MMDQCHEL RSKS+ QQRLAAASQLMA SAN+FPYSPK +NFLLQQ QS++QRAA
Sbjct: 301 PSKLDMMDQCHELFRSKSAQQQRLAAASQLMAASANSFPYSPKCMNFLLQQQQSETQRAA 360
Query: 361 AAALIMGEDLHKFSRSGRLERNEFSLNGSAGIVNPASRQIYLTFPADSTFKEEDVSNYFS 420
AA ++ +DLHKF RS RLERN+FS+NG AG+VNPASRQIYLTFPADSTF+EEDVSNYFS
Sbjct: 361 AALMMGADDLHKFGRS-RLERNDFSMNGGAGMVNPASRQIYLTFPADSTFREEDVSNYFS 420
Query: 421 MYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK 480
+YGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKV DK
Sbjct: 421 IYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVQDK 480
Query: 481 ----KQQQIDR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSQQDLLLRRKLEKQ---QA 540
+QQQ++R DFSPCGTPTGLDSR+ YD LQLG+RMFYNSQ D+L RRKLE+Q Q
Sbjct: 481 YRKQQQQQVERGDFSPCGTPTGLDSRDPYD-LQLGARMFYNSQ-DVLWRRKLEEQAELQQ 540
Query: 541 DIDLQSRRLLNLQLLDVKKNQLPHPYNHHRAFSPGSPIPSPTHSPNPFAQNLIFPTIRSA 560
++LQ+RRL+ LQLLDVKK+ H+R+ S GSPI SPT SPN F QNL+ +I S+
Sbjct: 541 ALELQNRRLMGLQLLDVKKH-------HNRSISTGSPIQSPTQSPNMFNQNLVLSSIHSS 588
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| C3H53_ORYSJ | 7.8e-135 | 53.89 | Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica GN... | [more] |
| C3H22_ORYSJ | 2.4e-128 | 53.75 | Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN... | [more] |
| C3H23_ORYSJ | 3.0e-126 | 50.77 | Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica GN... | [more] |
| C3H55_ARATH | 1.2e-103 | 44.25 | Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana GN=At5g124... | [more] |
| C3H46_ARATH | 7.1e-80 | 55.93 | Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana GN=At3g519... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KPZ6_CUCSA | 2.4e-276 | 85.96 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175810 PE=4 SV=1 | [more] |
| A0A0S3SEK5_PHAAN | 1.1e-209 | 71.26 | Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G258100 PE=... | [more] |
| A0A0L9V829_PHAAN | 1.1e-209 | 71.26 | Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g204800 PE=4 SV=1 | [more] |
| V7AH88_PHAVU | 2.2e-208 | 72.54 | Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G0138001g PE=4 SV=1 | [more] |
| K7LSD6_SOYBN | 1.4e-204 | 72.33 | Uncharacterized protein OS=Glycine max PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G12440.1 | 6.8e-105 | 44.25 | CCCH-type zinc fingerfamily protein with RNA-binding domain | [more] |
| AT3G21100.2 | 7.3e-91 | 42.65 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
| AT3G51950.1 | 4.0e-81 | 55.93 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)... | [more] |
| AT1G51520.2 | 3.4e-56 | 32.94 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
| AT3G63450.3 | 2.9e-55 | 54.81 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
