CmoCh04G001740 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G001740
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProliferating cell nuclear antigen
LocationCmo_Chr04 : 887666 .. 889640 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATCCGCCATTAACTCCCTGCGAAAGAAAAATGTTGGAGCTCCGTCTACTCCAAGGGGGTCTTCTGAAGAAGGTTCTTGAAGCCATGAAGGATCTCGTCAACGACGCCAATTTTGATTGTTCCCCTACTGGTTTCTCTCTCCAAGCCATGGATTCTAGTCACGTTGCTTTGGTCTCTCTCCTTCTCCGCTCAGAGGGTTTCGAGCACTATCGCTGCGATCGCAACGTCTCCATGGGTATGAACCTCAACAATATGGCTAAGATGCTTCGCTGCGCTGGCAACGACGACATCGTTACGCTCAAGGCCGATGATGGTAGCGATTGCATCACCTTCATGTTCGAAAACCCTTGTCAGTAAACTACCCCATTTCCTTCCTTTTTATTTTTTTTACCAAAACAAGTTATTAACTATAGCTATTTAGATAATAGTTATTGATTTGAAAGTTTAGAGAAAGATTAGAAAGATTTAAAGATTCAGTAGTTATGCAATCTCTCTCATAAATACTCAATGAGATCTATATTATTTACAACAACCAAAAGACGACGAACAAAAAAAAAAAAAAAAAGAGAATTAATAAAGCAGCTTCAGTTATTTGTTTCGATCGTGGACAATTTCTAACCAGGACTTACTGAGAAATGTTTCTGGACATTGTAGGTGAAATACTAATCCACTGGTTTTGAATGAACTCAATGGAAGTTAGTAGACTAGTTTTAGATTCCGTCAATGAGCAATGCAATGTATGAATCTCAGTGATGAGATAGGAAATAGTTATTCTGACTGATAATTGTTCGTTTCCGTGCTTAGCGCAAGATAAGATAGCTGATTTTGAGATGAAGTTGATGGACATTGATAGCGAGCATCTCGGAATCCCTGATGCCGAATATCAGTCAATTGTTAGAATGCCAGCAGCTGAGTTTGCCAGGATTTGCAGGGATCTCAGCACCATAGGCGATACTGGTAATCATTTGAATCATTTCGTTTCTTTTAGGAGGCATTATTCGAACATGTATAGGTTAACGAATAACCGATTTGTCTCAGTTCTGATCTCTGTGTCCAAGGAAGGAGTTCAATTCTCAACCAGAGGTGATATGGGCACTGCCAATATCGTTTGCAGACGAACTACCACAGTTGATAAGGTTTTTAACTCGATCACACAGCACAAACAATTCATTACAATTGATTCTGGGAATGTTATGGGCCCTGTTCTGTTCTAAAAAAATGTAGGACAGTGGTTTATCAATGTCGATCAATTGTTTTGATGGCTTATTTCTTTGTGAATTGAAATTTCACAGCCTGAAGAAGATGTCATAATAGAGATGGAAGAACCAGTTAGCTTAACCTTCGCCCTGAGGTACCTCAACTCTTTCACAAAGGCAACCCCTCTGGCAACTCAGGTGACCATTAGCATGTCTTCAGACCTACCTATGGTGATTGAATACAGAATTGAAGGTATGGGTTATATAAGATACTACTTGGCTCCTAAGATCGATGAAGAAGAAGAAGAAGCTGCAGCTGAAGCGATTCGCAGACCTGAGATAGAGCCCAAGAATACAGAAAAAGCAAAACCTAAAGCAGATTTGAAGCCAAAGGTCAAGCCTAAACCTGAATCAGAGATGAAGATTGACGAGGGCAATGAGTCTGTAAATGAATTCAATGCTGAAGAGGAAACTAATACTCCCAAGGAACCGAAGATTGAAACGATGGAACTTGAGTGTTGCCCGAAGTGAAATTAGTTAGGCAGTAGGAAACGTTAGCCACTTCTTAACTCCTGTTGGTTAGGTTAGTAGCAAGGGGTAATTTTTGTGACATAAATGCAACAATTGGTGGCTATATGTTTTTGGAATCTATTGTAAGAATCTAGACTAATATTTTGGGGTCAGGATTGGTTACATTTCATCCAAATCCTGACCATGGAAGGAGAAATGAGAAGTTGATGTATTTCTGTATTTTCTTGCAACCAAGCAGAATTACC

mRNA sequence

CAAAATCCGCCATTAACTCCCTGCGAAAGAAAAATGTTGGAGCTCCGTCTACTCCAAGGGGGTCTTCTGAAGAAGGTTCTTGAAGCCATGAAGGATCTCGTCAACGACGCCAATTTTGATTGTTCCCCTACTGGTTTCTCTCTCCAAGCCATGGATTCTAGTCACGTTGCTTTGGTCTCTCTCCTTCTCCGCTCAGAGGGTTTCGAGCACTATCGCTGCGATCGCAACGTCTCCATGGGTATGAACCTCAACAATATGGCTAAGATGCTTCGCTGCGCTGGCAACGACGACATCGTTACGCTCAAGGCCGATGATGGTAGCGATTGCATCACCTTCATGTTCGAAAACCCTTCGCAAGATAAGATAGCTGATTTTGAGATGAAGTTGATGGACATTGATAGCGAGCATCTCGGAATCCCTGATGCCGAATATCAGTCAATTGTTAGAATGCCAGCAGCTGAGTTTGCCAGGATTTGCAGGGATCTCAGCACCATAGGCGATACTGGTAATCATTTGAATCATTTCGTTTCTTTTAGGAGGCATTATTCGAACATGTATAGGTTAACGAATAACCGATTTGTCTCAGTTCTGATCTCTGTGTCCAAGGAAGGAGTTCAATTCTCAACCAGAGGTGATATGGGCACTGCCAATATCGTTTGCAGACGAACTACCACAGTTGATAAGCCTGAAGAAGATGTCATAATAGAGATGGAAGAACCAGTTAGCTTAACCTTCGCCCTGAGGTACCTCAACTCTTTCACAAAGGCAACCCCTCTGGCAACTCAGGTGACCATTAGCATGTCTTCAGACCTACCTATGGTGATTGAATACAGAATTGAAGGTATGGGTTATATAAGATACTACTTGGCTCCTAAGATCGATGAAGAAGAAGAAGAAGCTGCAGCTGAAGCGATTCGCAGACCTGAGATAGAGCCCAAGAATACAGAAAAAGCAAAACCTAAAGCAGATTTGAAGCCAAAGGTCAAGCCTAAACCTGAATCAGAGATGAAGATTGACGAGGGCAATGAGTCTGTAAATGAATTCAATGCTGAAGAGGAAACTAATACTCCCAAGGAACCGAAGATTGAAACGATGGAACTTGAGTGTTGCCCGAAGTGAAATTAGTTAGGCAGTAGGAAACGTTAGCCACTTCTTAACTCCTGTTGGTTAGGTTAGTAGCAAGGGGTAATTTTTGTGACATAAATGCAACAATTGGTGGCTATATGTTTTTGGAATCTATTGTAAGAATCTAGACTAATATTTTGGGGTCAGGATTGGTTACATTTCATCCAAATCCTGACCATGGAAGGAGAAATGAGAAGTTGATGTATTTCTGTATTTTCTTGCAACCAAGCAGAATTACC

Coding sequence (CDS)

ATGTTGGAGCTCCGTCTACTCCAAGGGGGTCTTCTGAAGAAGGTTCTTGAAGCCATGAAGGATCTCGTCAACGACGCCAATTTTGATTGTTCCCCTACTGGTTTCTCTCTCCAAGCCATGGATTCTAGTCACGTTGCTTTGGTCTCTCTCCTTCTCCGCTCAGAGGGTTTCGAGCACTATCGCTGCGATCGCAACGTCTCCATGGGTATGAACCTCAACAATATGGCTAAGATGCTTCGCTGCGCTGGCAACGACGACATCGTTACGCTCAAGGCCGATGATGGTAGCGATTGCATCACCTTCATGTTCGAAAACCCTTCGCAAGATAAGATAGCTGATTTTGAGATGAAGTTGATGGACATTGATAGCGAGCATCTCGGAATCCCTGATGCCGAATATCAGTCAATTGTTAGAATGCCAGCAGCTGAGTTTGCCAGGATTTGCAGGGATCTCAGCACCATAGGCGATACTGGTAATCATTTGAATCATTTCGTTTCTTTTAGGAGGCATTATTCGAACATGTATAGGTTAACGAATAACCGATTTGTCTCAGTTCTGATCTCTGTGTCCAAGGAAGGAGTTCAATTCTCAACCAGAGGTGATATGGGCACTGCCAATATCGTTTGCAGACGAACTACCACAGTTGATAAGCCTGAAGAAGATGTCATAATAGAGATGGAAGAACCAGTTAGCTTAACCTTCGCCCTGAGGTACCTCAACTCTTTCACAAAGGCAACCCCTCTGGCAACTCAGGTGACCATTAGCATGTCTTCAGACCTACCTATGGTGATTGAATACAGAATTGAAGGTATGGGTTATATAAGATACTACTTGGCTCCTAAGATCGATGAAGAAGAAGAAGAAGCTGCAGCTGAAGCGATTCGCAGACCTGAGATAGAGCCCAAGAATACAGAAAAAGCAAAACCTAAAGCAGATTTGAAGCCAAAGGTCAAGCCTAAACCTGAATCAGAGATGAAGATTGACGAGGGCAATGAGTCTGTAAATGAATTCAATGCTGAAGAGGAAACTAATACTCCCAAGGAACCGAAGATTGAAACGATGGAACTTGAGTGTTGCCCGAAGTGA
Homology
[Close]
BLAST of CmoCh04G001740 vs. Swiss-Prot
Match: PCNA_TOBAC (Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 2.2e-119
Identity = 217/288 (75.35%), Postives = 248/288 (86.11%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLE++KDLVNDANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNL NMAKML+CAGNDDI+TLKADDGSD +TFMFE+P+QDKIADFEMKLMD
Sbjct: 61  RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AEY +IVRMP+AEF+RIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FSTRGD+GTANIVCR+ TTVDKPEE  +IEM EPVSLTFALRYLN
Sbjct: 181 ----VVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYLN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEE 289
           SFTKATPL+  VTIS+SS+LP+V+EY+I  MGYIR+YLAPKI+E+EEE
Sbjct: 241 SFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEE 261

[Close]
BLAST of CmoCh04G001740 vs. Swiss-Prot
Match: PCNA_CATRO (Proliferating cell nuclear antigen OS=Catharanthus roseus PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-118
Identity = 216/292 (73.97%), Postives = 249/292 (85.27%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLE++KDLV DANFDCS +GFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESLKDLVTDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN SMGMNLNNMAKML+CAGNDDI+TLKADDGSD +TFMFE+P+QDKI+DFEMKLMD
Sbjct: 61  RCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AEY +IVRMP+AEFARIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FSTRGD+GTANIVCR+ TTVDKP+E  IIEM EPVSLTFALRYLN
Sbjct: 181 ----VVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPDEATIIEMNEPVSLTFALRYLN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAE 293
           SFTKATPL+  VTIS+SS+LP+V+EY+I  MGYIR+YLAPKI+E++EE + E
Sbjct: 241 SFTKATPLSNNVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDDEEQSLE 265

[Close]
BLAST of CmoCh04G001740 vs. Swiss-Prot
Match: PCNA1_DAUCA (Proliferating cell nuclear antigen OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 2.4e-118
Identity = 212/289 (73.36%), Postives = 250/289 (86.51%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKV++++KDLVNDANFDCS TGFSLQAMDSSHVALV++LLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNL NMAKML+CAGNDDI+T+KADDGSD +TFMFE+P+QDKIADFEMKLMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AEY +IVRMP+AEFARIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FSTRGD+GTANIVCR+ TTVDKPEE  +IEM EPVSLTFALRY+N
Sbjct: 181 ----VVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEA 290
           SFTKA+PL++ VTIS+SS+LP+V+EY+I  MGYIR+YLAPKI+EEE+E+
Sbjct: 241 SFTKASPLSSTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEEEDES 262

[Close]
BLAST of CmoCh04G001740 vs. Swiss-Prot
Match: PCNA_PEA (Proliferating cell nuclear antigen OS=Pisum sativum GN=PCNA PE=2 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 2.0e-117
Identity = 210/293 (71.67%), Postives = 251/293 (85.67%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLE++K+LVNDANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNLNNMAKML+CAGNDDI+T+KADDGSD +TFMFE+P+QDKI+DFEMKLMD
Sbjct: 61  RCDRNLSMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AEY +IVRMP+AEFARIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+I+VSKEGV+FST+GD+G+ANIVCR+ TTVDKPEE  +IEM EPV+L FALRY+N
Sbjct: 181 ----VVIAVSKEGVKFSTKGDIGSANIVCRQNTTVDKPEEATVIEMNEPVALQFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEA 294
           SFTKATPL++ VTIS+S++LP+V+EY+I  MGY+R+YLAPKI+E+EEE   +A
Sbjct: 241 SFTKATPLSSSVTISLSNELPVVVEYKIAEMGYVRFYLAPKIEEDEEETKPQA 266

[Close]
BLAST of CmoCh04G001740 vs. Swiss-Prot
Match: PCNA_ORYSJ (Proliferating cell nuclear antigen OS=Oryza sativa subsp. japonica GN=Os02g0805200 PE=2 SV=2)

HSP 1 Score: 423.7 bits (1088), Expect = 2.0e-117
Identity = 212/287 (73.87%), Postives = 248/287 (86.41%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLEA+++LV DANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNLNNMAKMLRCAGNDDI+T+KADDGSD +TFMFE+P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIPD+EYQ+IVRMP++EF+RIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPDSEYQAIVRMPSSEFSRICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FST GD+GTANIVCR+  TVDKPE+  IIEM+EPVSLTFALRY+N
Sbjct: 181 ----VIISVTKEGVKFSTAGDIGTANIVCRQNKTVDKPEDATIIEMQEPVSLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEE 288
           SFTKA+PL+ QVTIS+SS+LP+V+EY+I  MGYIR+YLAPKI+E+EE
Sbjct: 241 SFTKASPLSEQVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEE 260

[Close]
BLAST of CmoCh04G001740 vs. TrEMBL
Match: A0A0A0KSC4_CUCSA (Proliferating cell nuclear antigen OS=Cucumis sativus GN=Csa_5G198160 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 6.7e-144
Identity = 284/378 (75.13%), Postives = 302/378 (79.89%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLEA+KDLVNDANFDCS +GFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLVQGSLLKKVLEALKDLVNDANFDCSSSGFSLQAMDSSHVALVSLLLRSESFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDR +SMGMNLNNMAKMLRCAGNDDIVTLKADDGSD +TFMFENPSQDKIADFEMKLMD
Sbjct: 61  RCDRTMSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSVTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIPDAEYQSIV+MPA EFARIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               VLISVSKEGVQFSTRGD+GTANIVCRR TTVDKPEE V+IEMEEPVSLTFALRYLN
Sbjct: 181 ----VLISVSKEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA QVTISMSSDLP+V+EYRIEGMGYIRYYLAPKI+EE+E   A  I +PE E
Sbjct: 241 SFTKATPLANQVTISMSSDLPVVVEYRIEGMGYIRYYLAPKIEEEDE---AATISKPETE 300

Query: 301 PKNTEKAKPKADLKPKVKPKPESEMKIDEGNESVNEF---------------------NA 358
           PK+T KAKPKADLKP  +P PESEMK +E   SV E                       A
Sbjct: 301 PKHTAKAKPKADLKPNFEPNPESEMKSEEDEGSVIEIKDKDKSVFVINDEVQNSPVKSKA 348

[Close]
BLAST of CmoCh04G001740 vs. TrEMBL
Match: A0A068UZV2_COFCA (Proliferating cell nuclear antigen OS=Coffea canephora GN=GSCOC_T00039257001 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.6e-121
Identity = 236/358 (65.92%), Postives = 280/358 (78.21%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           M ELRL+QG LLKKVLE++KDLVNDANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MFELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN++MGMNL NMAKML+CAGNDDI+T+KADDG+D +TFMFE+PSQDKI+DFEMKLMD
Sbjct: 61  RCDRNLTMGMNLANMAKMLKCAGNDDIITIKADDGTDTVTFMFESPSQDKISDFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AEY++I+RMP+AEFARICRDLS+IGDT                       
Sbjct: 121 IDSEHLGIPEAEYEAIIRMPSAEFARICRDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FS RGD+G ANIVCR+  TVDKPE+  IIEM+EPV+LTFALRY+N
Sbjct: 181 ----VVISVTKEGVRFSARGDIGAANIVCRQNATVDKPEDATIIEMQEPVTLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA QVTISMSSDLP+V+EY++ GMGYIRYYLAPKI+EEEEE AA A       
Sbjct: 241 SFTKATPLAEQVTISMSSDLPVVVEYKVAGMGYIRYYLAPKIEEEEEEVAAHA------- 300

Query: 301 PKNTEKAKPKADLKPKVKPKPESEMKIDEGNESVNEFNAEEETNTPKEPKIETMELEC 359
                + KP+A+ K KV+ KP+ E ++ E  E   E     E+   +EP++    LEC
Sbjct: 301 -----QTKPRAETKLKVETKPKVEPELMEVAEDEKESKPPAESKPKEEPQL----LEC 315

[Close]
BLAST of CmoCh04G001740 vs. TrEMBL
Match: W9R1P0_9ROSA (Proliferating cell nuclear antigen OS=Morus notabilis GN=L484_001873 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-119
Identity = 238/366 (65.03%), Postives = 289/366 (78.96%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QGGLLKKVL+++KDLVNDANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGGLLKKVLDSLKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+S+GMNL+NMAKML+CAGNDDIVT+KADD +D +TFMFE+P+QDKIADF+MKLMD
Sbjct: 61  RCDRNLSLGMNLSNMAKMLKCAGNDDIVTIKADDAADSVTFMFESPNQDKIADFDMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AE+Q+IVRMP+AEFARIC+DLSTIGDT                       
Sbjct: 121 IDSEHLGIPEAEFQAIVRMPSAEFARICKDLSTIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FSTRGD+GTANIVCR  T+VDKPEE  IIEMEE VSLTFALRY+N
Sbjct: 181 ----VVISVTKEGVKFSTRGDIGTANIVCRHNTSVDKPEEATIIEMEETVSLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA QVTIS+SSDLP+V+EY++  MG+IR+YLAPKI EEEEE  A+   RP++E
Sbjct: 241 SFTKATPLANQVTISLSSDLPVVVEYKVAEMGHIRFYLAPKI-EEEEEIEAQRETRPQVE 300

Query: 301 PKNTEKAKPKADLKP---KVKPKPE------SEMKIDEGNESVNEFNAEEETNTPKEPKI 358
            K   K KPK +++P    +KPK E       +++I +  E + E + E +     + +I
Sbjct: 301 TK--PKTKPKTEIEPPIDDIKPKVEHVSDIKPKLEIKKPKEEI-EASGESKPQVDAKAEI 335

[Close]
BLAST of CmoCh04G001740 vs. TrEMBL
Match: A0A103Y996_CYNCS (Proliferating cell nuclear antigen OS=Cynara cardunculus var. scolymus GN=Ccrd_016791 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-119
Identity = 236/352 (67.05%), Postives = 274/352 (77.84%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKV+E++KDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNL NMAKML+CAGNDDIVT+KADDG DC+TFMFE+P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMAKMLKCAGNDDIVTIKADDGGDCVTFMFESPNQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+ EY++IVRMP++EFARIC+DLSTIGDT                       
Sbjct: 121 IDSEHLGIPETEYEAIVRMPSSEFARICKDLSTIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               VLISV+KEGV+FST+GD+GTANIVCR+ T+VDKPEE  IIEME PVSLTFALRY+N
Sbjct: 181 ----VLISVTKEGVRFSTKGDIGTANIVCRQNTSVDKPEEATIIEMETPVSLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLATQVT+S+SS+LP+V+EY+I  MGY+R+YLAPKI+E+EE      + R + E
Sbjct: 241 SFTKATPLATQVTVSLSSELPVVVEYKIGEMGYLRFYLAPKIEEDEE------MGRHQAE 300

Query: 301 PKNTEKAKPKADLKPKVKPKPESE-----MKIDEGNESVNEFNAEEETNTPK 348
           P   E  K K +  PK +PK   E     MKID         + EEE   PK
Sbjct: 301 PVAVE-TKKKPEKTPKTEPKTNGEPKRRVMKID--------LDEEEEETKPK 310

[Close]
BLAST of CmoCh04G001740 vs. TrEMBL
Match: D2KQP2_PERAE (Proliferating cell nuclear antigen OS=Persea americana PE=2 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.7e-118
Identity = 224/315 (71.11%), Postives = 261/315 (82.86%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLE++KDLV DANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESVKDLVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNLNNM+KML+CAGNDDI+T+KADDGSD +TFMFE+P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AEY +IVRMP+AEFARIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FSTRGD+GTANIVCR+ T+VDKPEE  IIEM EPVSLTFALRY+N
Sbjct: 181 ----VVISVTKEGVKFSTRGDIGTANIVCRQNTSVDKPEESTIIEMNEPVSLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA  VTIS+SS+LP+V+EY+I  MGYIR+YLAPKI+++EE   AEA   PE +
Sbjct: 241 SFTKATPLANSVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDDEEGMQAEAQPPPEKK 288

Query: 301 PKNTEKAKPKADLKP 316
            K   KA+ +A  +P
Sbjct: 301 AKKEPKAEAEAKSEP 288

[Close]
BLAST of CmoCh04G001740 vs. TAIR10
Match: AT2G29570.1 (AT2G29570.1 proliferating cell nuclear antigen 2)

HSP 1 Score: 422.5 bits (1085), Expect = 2.5e-118
Identity = 212/287 (73.87%), Postives = 245/287 (85.37%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLEA+KDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNL NM+KML+CAGNDDI+T+KADDGSD +TFMFE+P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIPDAEY SIVRMP+ EF+RIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FST GD+GTANIV R+ TTVDKPE+ ++IEM EPVSL+FALRY+N
Sbjct: 181 ----VVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEE 288
           SFTKATPL+  VTIS+SS+LP+V+EY++  MGYIRYYLAPKI+EEE+
Sbjct: 241 SFTKATPLSETVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED 260

[Close]
BLAST of CmoCh04G001740 vs. TAIR10
Match: AT1G07370.1 (AT1G07370.1 proliferating cellular nuclear antigen 1)

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 210/287 (73.17%), Postives = 245/287 (85.37%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLE++KDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+SMGMNL NM+KML+CAGNDDI+T+KADDG D +TFMFE+P+QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIPDAEY SIVRMP+ EF+RIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FST GD+GTANIV R+ TTVDKPE+ ++IEM+EPVSL+FALRY+N
Sbjct: 181 ----VVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEE 288
           SFTKATPL+  VTIS+SS+LP+V+EY++  MGYIRYYLAPKI+EEE+
Sbjct: 241 SFTKATPLSDTVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED 260

[Close]
BLAST of CmoCh04G001740 vs. NCBI nr
Match: gi|449465051|ref|XP_004150242.1| (PREDICTED: proliferating cell nuclear antigen-like [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 9.6e-144
Identity = 284/378 (75.13%), Postives = 302/378 (79.89%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QG LLKKVLEA+KDLVNDANFDCS +GFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLVQGSLLKKVLEALKDLVNDANFDCSSSGFSLQAMDSSHVALVSLLLRSESFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDR +SMGMNLNNMAKMLRCAGNDDIVTLKADDGSD +TFMFENPSQDKIADFEMKLMD
Sbjct: 61  RCDRTMSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSVTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIPDAEYQSIV+MPA EFARIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               VLISVSKEGVQFSTRGD+GTANIVCRR TTVDKPEE V+IEMEEPVSLTFALRYLN
Sbjct: 181 ----VLISVSKEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA QVTISMSSDLP+V+EYRIEGMGYIRYYLAPKI+EE+E   A  I +PE E
Sbjct: 241 SFTKATPLANQVTISMSSDLPVVVEYRIEGMGYIRYYLAPKIEEEDE---AATISKPETE 300

Query: 301 PKNTEKAKPKADLKPKVKPKPESEMKIDEGNESVNEF---------------------NA 358
           PK+T KAKPKADLKP  +P PESEMK +E   SV E                       A
Sbjct: 301 PKHTAKAKPKADLKPNFEPNPESEMKSEEDEGSVIEIKDKDKSVFVINDEVQNSPVKSKA 348

[Close]
BLAST of CmoCh04G001740 vs. NCBI nr
Match: gi|659126473|ref|XP_008463200.1| (PREDICTED: proliferating cell nuclear antigen-like isoform X1 [Cucumis melo])

HSP 1 Score: 513.8 bits (1322), Expect = 2.4e-142
Identity = 286/381 (75.07%), Postives = 304/381 (79.79%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRLLQG LLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLLQGSLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDR +SMGMNLNNMAKMLRCAGNDDIVTLKADDGSD +TFMFENPSQDKIADFEMKLMD
Sbjct: 61  RCDRTISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIPDAEYQSIV+MPA EFARIC+DLS+IGDT                       
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               VLISVSKEGVQFSTRGD+GTANIVCRR TTVDKPEE V+IEMEEPVSLTFALRYLN
Sbjct: 181 ----VLISVSKEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA QVTISMSSDLP+V+EYRIE MGYIRYYLAPKI+EE+E   A AI +PE E
Sbjct: 241 SFTKATPLANQVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDE---AAAISKPETE 300

Query: 301 PKNTEKAKPKADLKPKVK--PKPESEMKIDEGNESVNEF--------------------- 358
            K+T KAKPKADLKPK +  P+ ESEMK +E   SV E                      
Sbjct: 301 SKHTAKAKPKADLKPKFEAHPESESEMKSEEDKGSVIEIKDKDNKSVFVINDEEKNSSVK 351

[Close]
BLAST of CmoCh04G001740 vs. NCBI nr
Match: gi|659126475|ref|XP_008463201.1| (PREDICTED: proliferating cell nuclear antigen-like isoform X2 [Cucumis melo])

HSP 1 Score: 485.7 bits (1249), Expect = 6.9e-134
Identity = 269/363 (74.10%), Postives = 287/363 (79.06%), Query Frame = 1 

Query: 19  MKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHYRCDRNVSMGMNLNNMAKM 78
           MKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSE FEHYRCDR +SMGMNLNNMAKM
Sbjct: 1   MKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHYRCDRTISMGMNLNNMAKM 60

Query: 79  LRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMDIDSEHLGIPDAEYQSIVR 138
           LRCAGNDDIVTLKADDGSD +TFMFENPSQDKIADFEMKLMDIDSEHLGIPDAEYQSIV+
Sbjct: 61  LRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMDIDSEHLGIPDAEYQSIVK 120

Query: 139 MPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNNRFVSVLISVSKEGVQFST 198
           MPA EFARIC+DLS+IGDT                           VLISVSKEGVQFST
Sbjct: 121 MPAVEFARICKDLSSIGDT---------------------------VLISVSKEGVQFST 180

Query: 199 RGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLNSFTKATPLATQVTISMSS 258
           RGD+GTANIVCRR TTVDKPEE V+IEMEEPVSLTFALRYLNSFTKATPLA QVTISMSS
Sbjct: 181 RGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSS 240

Query: 259 DLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIEPKNTEKAKPKADLKPKVK 318
           DLP+V+EYRIE MGYIRYYLAPKI+EE+E AA   I +PE E K+T KAKPKADLKPK +
Sbjct: 241 DLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAA---ISKPETESKHTAKAKPKADLKPKFE 300

Query: 319 --PKPESEMKIDEGNESVNEF----------------------NAEEETNTPKEPKIETM 358
             P+ ESEMK +E   SV E                        A+EETNTPKEPKIETM
Sbjct: 301 AHPESESEMKSEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEETNTPKEPKIETM 333

[Close]
BLAST of CmoCh04G001740 vs. NCBI nr
Match: gi|661882490|emb|CDP14070.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 444.1 bits (1141), Expect = 2.3e-121
Identity = 236/358 (65.92%), Postives = 280/358 (78.21%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           M ELRL+QG LLKKVLE++KDLVNDANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MFELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN++MGMNL NMAKML+CAGNDDI+T+KADDG+D +TFMFE+PSQDKI+DFEMKLMD
Sbjct: 61  RCDRNLTMGMNLANMAKMLKCAGNDDIITIKADDGTDTVTFMFESPSQDKISDFEMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AEY++I+RMP+AEFARICRDLS+IGDT                       
Sbjct: 121 IDSEHLGIPEAEYEAIIRMPSAEFARICRDLSSIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FS RGD+G ANIVCR+  TVDKPE+  IIEM+EPV+LTFALRY+N
Sbjct: 181 ----VVISVTKEGVRFSARGDIGAANIVCRQNATVDKPEDATIIEMQEPVTLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA QVTISMSSDLP+V+EY++ GMGYIRYYLAPKI+EEEEE AA A       
Sbjct: 241 SFTKATPLAEQVTISMSSDLPVVVEYKVAGMGYIRYYLAPKIEEEEEEVAAHA------- 300

Query: 301 PKNTEKAKPKADLKPKVKPKPESEMKIDEGNESVNEFNAEEETNTPKEPKIETMELEC 359
                + KP+A+ K KV+ KP+ E ++ E  E   E     E+   +EP++    LEC
Sbjct: 301 -----QTKPRAETKLKVETKPKVEPELMEVAEDEKESKPPAESKPKEEPQL----LEC 315

[Close]
BLAST of CmoCh04G001740 vs. NCBI nr
Match: gi|703088291|ref|XP_010093496.1| (Proliferating cell nuclear antigen large form [Morus notabilis])

HSP 1 Score: 436.8 bits (1122), Expect = 3.7e-119
Identity = 238/366 (65.03%), Postives = 289/366 (78.96%), Query Frame = 1 

Query: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
           MLELRL+QGGLLKKVL+++KDLVNDANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGGLLKKVLDSLKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120
           RCDRN+S+GMNL+NMAKML+CAGNDDIVT+KADD +D +TFMFE+P+QDKIADF+MKLMD
Sbjct: 61  RCDRNLSLGMNLSNMAKMLKCAGNDDIVTIKADDAADSVTFMFESPNQDKIADFDMKLMD 120

Query: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNMYRLTNN 180
           IDSEHLGIP+AE+Q+IVRMP+AEFARIC+DLSTIGDT                       
Sbjct: 121 IDSEHLGIPEAEFQAIVRMPSAEFARICKDLSTIGDT----------------------- 180

Query: 181 RFVSVLISVSKEGVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLN 240
               V+ISV+KEGV+FSTRGD+GTANIVCR  T+VDKPEE  IIEMEE VSLTFALRY+N
Sbjct: 181 ----VVISVTKEGVKFSTRGDIGTANIVCRHNTSVDKPEEATIIEMEETVSLTFALRYMN 240

Query: 241 SFTKATPLATQVTISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEAAAEAIRRPEIE 300
           SFTKATPLA QVTIS+SSDLP+V+EY++  MG+IR+YLAPKI EEEEE  A+   RP++E
Sbjct: 241 SFTKATPLANQVTISLSSDLPVVVEYKVAEMGHIRFYLAPKI-EEEEEIEAQRETRPQVE 300

Query: 301 PKNTEKAKPKADLKP---KVKPKPE------SEMKIDEGNESVNEFNAEEETNTPKEPKI 358
            K   K KPK +++P    +KPK E       +++I +  E + E + E +     + +I
Sbjct: 301 TK--PKTKPKTEIEPPIDDIKPKVEHVSDIKPKLEIKKPKEEI-EASGESKPQVDAKAEI 335

The following BLAST results are available for this feature:
BLAST of CmoCh04G001740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PCNA_TOBAC2.2e-11975.35Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA PE=2 SV=1[more]
PCNA_CATRO1.4e-11873.97Proliferating cell nuclear antigen OS=Catharanthus roseus PE=2 SV=1[more]
PCNA1_DAUCA2.4e-11873.36Proliferating cell nuclear antigen OS=Daucus carota PE=3 SV=1[more]
PCNA_PEA2.0e-11771.67Proliferating cell nuclear antigen OS=Pisum sativum GN=PCNA PE=2 SV=1[more]
PCNA_ORYSJ2.0e-11773.87Proliferating cell nuclear antigen OS=Oryza sativa subsp. japonica GN=Os02g08052... [more]
BLAST of CmoCh04G001740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSC4_CUCSA6.7e-14475.13Proliferating cell nuclear antigen OS=Cucumis sativus GN=Csa_5G198160 PE=3 SV=1[more]
A0A068UZV2_COFCA1.6e-12165.92Proliferating cell nuclear antigen OS=Coffea canephora GN=GSCOC_T00039257001 PE=... [more]
W9R1P0_9ROSA2.6e-11965.03Proliferating cell nuclear antigen OS=Morus notabilis GN=L484_001873 PE=3 SV=1[more]
A0A103Y996_CYNCS2.6e-11967.05Proliferating cell nuclear antigen OS=Cynara cardunculus var. scolymus GN=Ccrd_0... [more]
D2KQP2_PERAE1.7e-11871.11Proliferating cell nuclear antigen OS=Persea americana PE=2 SV=1[more]
BLAST of CmoCh04G001740 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G29570.12.5e-11873.87 proliferating cell nuclear antigen 2[more]
AT1G07370.12.1e-11773.17 proliferating cellular nuclear antigen 1[more]
BLAST of CmoCh04G001740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465051|ref|XP_004150242.1|9.6e-14475.13PREDICTED: proliferating cell nuclear antigen-like [Cucumis sativus][more]
gi|659126473|ref|XP_008463200.1|2.4e-14275.07PREDICTED: proliferating cell nuclear antigen-like isoform X1 [Cucumis melo][more]
gi|659126475|ref|XP_008463201.1|6.9e-13474.10PREDICTED: proliferating cell nuclear antigen-like isoform X2 [Cucumis melo][more]
gi|661882490|emb|CDP14070.1|2.3e-12165.92unnamed protein product [Coffea canephora][more]
gi|703088291|ref|XP_010093496.1|3.7e-11965.03Proliferating cell nuclear antigen large form [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000730Pr_cel_nuc_antig
IPR022648Pr_cel_nuc_antig_N
IPR022649Pr_cel_nuc_antig_C
IPR022659Pr_cel_nuc_antig_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0030337DNA polymerase processivity factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006275regulation of DNA replication
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006275 regulation of DNA replication
cellular_component GO:0042575 DNA polymerase complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0030337 DNA polymerase processivity factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G001740.1CmoCh04G001740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000730Proliferating cell nuclear antigen, PCNAPRINTSPR00339PCNACYCLINcoord: 110..132
score: 3.9E-49coord: 56..80
score: 3.9E-49coord: 10..29
score: 3.9E-49coord: 34..52
score: 3.9
IPR000730Proliferating cell nuclear antigen, PCNAHAMAPMF_00317DNApol_clamp_archcoord: 2..282
score: 18
IPR000730Proliferating cell nuclear antigen, PCNAPANTHERPTHR11352PROLIFERATING CELL NUCLEAR ANTIGENcoord: 1..161
score: 2.0E-161coord: 184..292
score: 2.0E
IPR000730Proliferating cell nuclear antigen, PCNATIGRFAMsTIGR00590TIGR00590coord: 1..157
score: 8.4E-78coord: 184..286
score: 1.6
IPR022648Proliferating cell nuclear antigen, PCNA, N-terminalPFAMPF00705PCNA_Ncoord: 1..125
score: 8.8
IPR022649Proliferating cell nuclear antigen, PCNA, C-terminalPFAMPF02747PCNA_Ccoord: 127..157
score: 1.3E-9coord: 184..281
score: 2.2
IPR022659Proliferating cell nuclear antigen, PCNA, conserved sitePROSITEPS00293PCNA_2coord: 61..79
scor
IPR022659Proliferating cell nuclear antigen, PCNA, conserved sitePROSITEPS01251PCNA_1coord: 34..57
scor
NoneNo IPR availableGENE3DG3DSA:3.70.10.10coord: 1..287
score: 1.1E
NoneNo IPR availableunknownSSF55979DNA clampcoord: 1..126
score: 6.28E-47coord: 127..157
score: 6.48E-36coord: 185..282
score: 6.48

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G001740Cucsa.164650Cucumber (Gy14) v1cgycmoB0474
CmoCh04G001740CmaCh04G001720Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G001740Cla004319Watermelon (97103) v1cmowmB685
CmoCh04G001740Csa5G198160Cucumber (Chinese Long) v2cmocuB737
CmoCh04G001740MELO3C025142Melon (DHL92) v3.5.1cmomeB649
CmoCh04G001740ClCG07G003870Watermelon (Charleston Gray)cmowcgB676
CmoCh04G001740CSPI05G10350Wild cucumber (PI 183967)cmocpiB747
CmoCh04G001740CsaV3_5G008820Cucumber (Chinese Long) v3cmocucB0873
CmoCh04G001740Cla97C07G132350Watermelon (97103) v2cmowmbB755
CmoCh04G001740Bhi07G000546Wax gourdcmowgoB0889
CmoCh04G001740CsGy5G007690Cucumber (Gy14) v2cgybcmoB652
CmoCh04G001740Carg18352Silver-seed gourdcarcmoB0123
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G001740Cucurbita pepo (Zucchini)cmocpeB653
CmoCh04G001740Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G001740Cucurbita pepo (Zucchini)cmocpeB674
CmoCh04G001740Bottle gourd (USVL1VR-Ls)cmolsiB630
CmoCh04G001740Bottle gourd (USVL1VR-Ls)cmolsiB649
CmoCh04G001740Bottle gourd (USVL1VR-Ls)cmolsiB658
CmoCh04G001740Bottle gourd (USVL1VR-Ls)cmolsiB670
CmoCh04G001740Cucumber (Gy14) v2cgybcmoB522
CmoCh04G001740Cucumber (Gy14) v2cgybcmoB823
CmoCh04G001740Melon (DHL92) v3.6.1cmomedB733
CmoCh04G001740Melon (DHL92) v3.6.1cmomedB798
CmoCh04G001740Silver-seed gourdcarcmoB0372
CmoCh04G001740Silver-seed gourdcarcmoB0755
CmoCh04G001740Silver-seed gourdcarcmoB0924
CmoCh04G001740Cucumber (Chinese Long) v3cmocucB0906
CmoCh04G001740Watermelon (97103) v2cmowmbB695
CmoCh04G001740Watermelon (97103) v2cmowmbB722
CmoCh04G001740Wax gourdcmowgoB0864
CmoCh04G001740Cucurbita moschata (Rifu)cmocmoB267
CmoCh04G001740Cucurbita moschata (Rifu)cmocmoB448
CmoCh04G001740Cucurbita moschata (Rifu)cmocmoB464
CmoCh04G001740Cucumber (Gy14) v1cgycmoB0373
CmoCh04G001740Cucurbita maxima (Rimu)cmacmoB731
CmoCh04G001740Wild cucumber (PI 183967)cmocpiB776
CmoCh04G001740Cucumber (Chinese Long) v2cmocuB767
CmoCh04G001740Melon (DHL92) v3.5.1cmomeB676
CmoCh04G001740Watermelon (Charleston Gray)cmowcgB630
CmoCh04G001740Watermelon (97103) v1cmowmB737