CmoCh04G001240 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G001240
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTrichome birefringence-like protein
LocationCmo_Chr04 : 640740 .. 641193 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCTAGAATCCTTAAGAGGAAAGAGGATGATGTTTGTTGGAGATTCATTAAATCGAGGGCAGTATGTTTCAATGGTTTGTCTTCTTCACTCTCTAATAGCCGACGATGCCAAATCCATGGAGACCTTCGATTCACTCACTATCTTCACCGCCAAGGTATGTATGATAACTTTATGTTTCTCAAGTTTTTTTTCTTCTTCAAAATATGATCTTTTAATAACTATTAATTGATATTAAATGAATATAGGAGTACAATATGACAATCGAGTTCTATTGGGCGCCGTTTCTCCTAGAATCAAATTCAGATAATGCAGTGATCCATCGAATTTCAGATCGAATAGTGAGAAGAGATTCGATAAATAAACATGGAAGGCATTGGAAAAGAGTTGATATTATGGTTTTCAATACTTATCTTTGGTGGATTACTGGCTCAAACATGAAAATCCTGTGA

mRNA sequence

ATGATGCTAGAATCCTTAAGAGGAAAGAGGATGATGTTTGTTGGAGATTCATTAAATCGAGGGCAGTATGTTTCAATGGTTTGTCTTCTTCACTCTCTAATAGCCGACGATGCCAAATCCATGGAGACCTTCGATTCACTCACTATCTTCACCGCCAAGGAGTACAATATGACAATCGAGTTCTATTGGGCGCCGTTTCTCCTAGAATCAAATTCAGATAATGCAGTGATCCATCGAATTTCAGATCGAATAGTGAGAAGAGATTCGATAAATAAACATGGAAGGCATTGGAAAAGAGTTGATATTATGGTTTTCAATACTTATCTTTGGTGGATTACTGGCTCAAACATGAAAATCCTGTGA

Coding sequence (CDS)

ATGATGCTAGAATCCTTAAGAGGAAAGAGGATGATGTTTGTTGGAGATTCATTAAATCGAGGGCAGTATGTTTCAATGGTTTGTCTTCTTCACTCTCTAATAGCCGACGATGCCAAATCCATGGAGACCTTCGATTCACTCACTATCTTCACCGCCAAGGAGTACAATATGACAATCGAGTTCTATTGGGCGCCGTTTCTCCTAGAATCAAATTCAGATAATGCAGTGATCCATCGAATTTCAGATCGAATAGTGAGAAGAGATTCGATAAATAAACATGGAAGGCATTGGAAAAGAGTTGATATTATGGTTTTCAATACTTATCTTTGGTGGATTACTGGCTCAAACATGAAAATCCTGTGA
Homology
[Close]
BLAST of CmoCh04G001240 vs. Swiss-Prot
Match: TBL33_ARATH (Protein trichome birefringence-like 33 OS=Arabidopsis thaliana GN=TBL33 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.2e-51
Identity = 91/120 (75.83%), Postives = 108/120 (90.00%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMM+VGDSLNRG +VSM+CLLH LI +D KS++T  SLT+FTAKEYN TIE
Sbjct: 141 LMLETLRGKRMMYVGDSLNRGMFVSMICLLHRLIPEDQKSIKTNGSLTVFTAKEYNATIE 200

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSD+A++HRISDR+VR+ SINKHGRHWK VDI++FNTYLWW+TG  M IL
Sbjct: 201 FYWAPFLLESNSDDAIVHRISDRVVRKGSINKHGRHWKGVDIIIFNTYLWWMTGLKMNIL 260

[Close]
BLAST of CmoCh04G001240 vs. Swiss-Prot
Match: TBL32_ARATH (Protein trichome birefringence-like 32 OS=Arabidopsis thaliana GN=TBL32 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-50
Identity = 91/120 (75.83%), Postives = 107/120 (89.17%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLESLRGK+MMFVGDSLNRG YVS++CLLHS I +++KSM+TF SLT+F+ K+YN TIE
Sbjct: 166 VMLESLRGKKMMFVGDSLNRGMYVSLICLLHSQIPENSKSMDTFGSLTVFSLKDYNATIE 225

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNA +HR+SDRIVR+ SINKHGRHW+  DI+VFNTYLWW TG  MKIL
Sbjct: 226 FYWAPFLLESNSDNATVHRVSDRIVRKGSINKHGRHWRGADIVVFNTYLWWRTGFKMKIL 285

[Close]
BLAST of CmoCh04G001240 vs. Swiss-Prot
Match: TBL35_ARATH (Protein trichome birefringence-like 35 OS=Arabidopsis thaliana GN=TBL35 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-35
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 1 

Query: 2   MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEF 61
           M E LRGKR+MFVGDSLNRGQ++SMVCLL S+I  D +SM     LTIF A++YN T+EF
Sbjct: 172 MWEKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPRDKQSMSPNAHLTIFRAEDYNATVEF 231

Query: 62  YWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWW 112
            WAP L+ESNSD+ V HR+S+RI+R DS+ KH   W+  DI++FNTYLWW
Sbjct: 232 LWAPLLVESNSDDPVNHRLSERIIRPDSVLKHASKWQHADILIFNTYLWW 281

[Close]
BLAST of CmoCh04G001240 vs. Swiss-Prot
Match: TBL29_ARATH (Protein ESKIMO 1 OS=Arabidopsis thaliana GN=ESK1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.1e-35
Identity = 67/120 (55.83%), Postives = 90/120 (75.00%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           ++LE LR KRMMFVGDSLNR Q+ SMVCL+ S++    KS+    SL++F  ++YN T+E
Sbjct: 200 LLLEKLRNKRMMFVGDSLNRNQWESMVCLVQSVVPPGRKSLNKTGSLSVFRVEDYNATVE 259

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFL+ESNSD+  +H I +RI+  +SI KHG +WK VD +VFNTY+WW+    MK+L
Sbjct: 260 FYWAPFLVESNSDDPNMHSILNRIIMPESIEKHGVNWKGVDFLVFNTYIWWMNTFAMKVL 319

[Close]
BLAST of CmoCh04G001240 vs. Swiss-Prot
Match: TBL28_ARATH (Protein trichome birefringence-like 28 OS=Arabidopsis thaliana GN=TBL28 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-33
Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           ++LE LR KR+MFVGDSLNR Q+ SMVCL+ S+I    KS+    SLT+F  ++YN T+E
Sbjct: 131 VLLEKLRNKRLMFVGDSLNRNQWESMVCLVQSVIPPGRKSLNQTGSLTVFKIQDYNATVE 190

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFL+ESNSD+   H I DRI+  +SI KHG +W  VD +VFN+Y+WW+   ++K+L
Sbjct: 191 FYWAPFLVESNSDDPEKHSIIDRIIMPESIEKHGVNWIGVDFLVFNSYIWWMNTVSIKVL 250

[Close]
BLAST of CmoCh04G001240 vs. TrEMBL
Match: A0A0A0KM73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G217170 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.7e-57
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQ+VSMVCLLHSLI DDAKSMETFDSLT+FTAKEYN TIE
Sbjct: 144 LMLEALRGKRMMFVGDSLNRGQFVSMVCLLHSLIPDDAKSMETFDSLTVFTAKEYNATIE 203

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAVIHRISDRIVRR SINKHGRHWK VDIMVFNTYLWW+TG NMKIL
Sbjct: 204 FYWAPFLLESNSDNAVIHRISDRIVRRGSINKHGRHWKGVDIMVFNTYLWWMTGLNMKIL 263

[Close]
BLAST of CmoCh04G001240 vs. TrEMBL
Match: D7T4I9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01930 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-54
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQYVSMVCLLHSLI +DAKSMETFDSLTIFTAKEYN TIE
Sbjct: 135 LMLETLRGKRMMFVGDSLNRGQYVSMVCLLHSLIPEDAKSMETFDSLTIFTAKEYNATIE 194

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSD+AVIHR+SDRIVR+ SINKHG++WK VDI+VFNTYLWW+TG  MKIL
Sbjct: 195 FYWAPFLLESNSDDAVIHRVSDRIVRKGSINKHGKYWKGVDILVFNTYLWWMTGLKMKIL 254

[Close]
BLAST of CmoCh04G001240 vs. TrEMBL
Match: A0A067LJA3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01200 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.6e-54
Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQYVSMVCLLH LI +DAKSMETFDSLTIFTAKEYN TIE
Sbjct: 138 LMLETLRGKRMMFVGDSLNRGQYVSMVCLLHRLIPEDAKSMETFDSLTIFTAKEYNATIE 197

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAV+HRISDRIVR+ SINKHG++WK VDI+VFNTYLWW+TG  MKIL
Sbjct: 198 FYWAPFLLESNSDNAVVHRISDRIVRKGSINKHGKNWKGVDILVFNTYLWWMTGLKMKIL 257

[Close]
BLAST of CmoCh04G001240 vs. TrEMBL
Match: G7K771_MEDTR (Trichome birefringence-like protein OS=Medicago truncatula GN=MTR_5g083260 PE=4 SV=2)

HSP 1 Score: 218.0 bits (554), Expect = 6.2e-54
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQYVS VCLLH LI +DAKSMETFDSLT+FTAKEYN TIE
Sbjct: 143 LMLETLRGKRMMFVGDSLNRGQYVSFVCLLHQLIPEDAKSMETFDSLTVFTAKEYNATIE 202

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAV+HRISDRIVR+ SINKHGR+WK VDI+VFNTYLWW+TG  MKIL
Sbjct: 203 FYWAPFLLESNSDNAVVHRISDRIVRKGSINKHGRNWKGVDILVFNTYLWWMTGLEMKIL 262

[Close]
BLAST of CmoCh04G001240 vs. TrEMBL
Match: G7J2C5_MEDTR (Trichome birefringence-like protein OS=Medicago truncatula GN=MTR_3g071650 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.1e-54
Identity = 101/120 (84.17%), Postives = 112/120 (93.33%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQYVS++CLLH LI   AKSMETFDSLT+FTAKEYN TIE
Sbjct: 149 LMLETLRGKRMMFVGDSLNRGQYVSLICLLHHLIPQHAKSMETFDSLTVFTAKEYNATIE 208

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAVIHR++DRIVR+ SINKHGR+WK  DI+VFNTYLWW+TGSNMKIL
Sbjct: 209 FYWAPFLLESNSDNAVIHRVTDRIVRKGSINKHGRYWKGADILVFNTYLWWVTGSNMKIL 268

[Close]
BLAST of CmoCh04G001240 vs. TAIR10
Match: AT2G40320.1 (AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 33)

HSP 1 Score: 200.7 bits (509), Expect = 5.2e-52
Identity = 91/120 (75.83%), Postives = 108/120 (90.00%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMM+VGDSLNRG +VSM+CLLH LI +D KS++T  SLT+FTAKEYN TIE
Sbjct: 141 LMLETLRGKRMMYVGDSLNRGMFVSMICLLHRLIPEDQKSIKTNGSLTVFTAKEYNATIE 200

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSD+A++HRISDR+VR+ SINKHGRHWK VDI++FNTYLWW+TG  M IL
Sbjct: 201 FYWAPFLLESNSDDAIVHRISDRVVRKGSINKHGRHWKGVDIIIFNTYLWWMTGLKMNIL 260

[Close]
BLAST of CmoCh04G001240 vs. TAIR10
Match: AT3G11030.1 (AT3G11030.1 TRICHOME BIREFRINGENCE-LIKE 32)

HSP 1 Score: 199.9 bits (507), Expect = 8.9e-52
Identity = 91/120 (75.83%), Postives = 107/120 (89.17%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLESLRGK+MMFVGDSLNRG YVS++CLLHS I +++KSM+TF SLT+F+ K+YN TIE
Sbjct: 166 VMLESLRGKKMMFVGDSLNRGMYVSLICLLHSQIPENSKSMDTFGSLTVFSLKDYNATIE 225

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNA +HR+SDRIVR+ SINKHGRHW+  DI+VFNTYLWW TG  MKIL
Sbjct: 226 FYWAPFLLESNSDNATVHRVSDRIVRKGSINKHGRHWRGADIVVFNTYLWWRTGFKMKIL 285

[Close]
BLAST of CmoCh04G001240 vs. TAIR10
Match: AT5G01620.3 (AT5G01620.3 TRICHOME BIREFRINGENCE-LIKE 35)

HSP 1 Score: 150.2 bits (378), Expect = 8.1e-37
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 1 

Query: 2   MLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIEF 61
           M E LRGKR+MFVGDSLNRGQ++SMVCLL S+I  D +SM     LTIF A++YN T+EF
Sbjct: 180 MWEKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPRDKQSMSPNAHLTIFRAEDYNATVEF 239

Query: 62  YWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWW 112
            WAP L+ESNSD+ V HR+S+RI+R DS+ KH   W+  DI++FNTYLWW
Sbjct: 240 LWAPLLVESNSDDPVNHRLSERIIRPDSVLKHASKWQHADILIFNTYLWW 289

[Close]
BLAST of CmoCh04G001240 vs. TAIR10
Match: AT3G55990.1 (AT3G55990.1 Plant protein of unknown function (DUF828))

HSP 1 Score: 147.9 bits (372), Expect = 4.0e-36
Identity = 67/120 (55.83%), Postives = 90/120 (75.00%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           ++LE LR KRMMFVGDSLNR Q+ SMVCL+ S++    KS+    SL++F  ++YN T+E
Sbjct: 200 LLLEKLRNKRMMFVGDSLNRNQWESMVCLVQSVVPPGRKSLNKTGSLSVFRVEDYNATVE 259

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFL+ESNSD+  +H I +RI+  +SI KHG +WK VD +VFNTY+WW+    MK+L
Sbjct: 260 FYWAPFLVESNSDDPNMHSILNRIIMPESIEKHGVNWKGVDFLVFNTYIWWMNTFAMKVL 319

[Close]
BLAST of CmoCh04G001240 vs. TAIR10
Match: AT2G40150.1 (AT2G40150.1 TRICHOME BIREFRINGENCE-LIKE 28)

HSP 1 Score: 143.7 bits (361), Expect = 7.5e-35
Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           ++LE LR KR+MFVGDSLNR Q+ SMVCL+ S+I    KS+    SLT+F  ++YN T+E
Sbjct: 131 VLLEKLRNKRLMFVGDSLNRNQWESMVCLVQSVIPPGRKSLNQTGSLTVFKIQDYNATVE 190

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFL+ESNSD+   H I DRI+  +SI KHG +W  VD +VFN+Y+WW+   ++K+L
Sbjct: 191 FYWAPFLVESNSDDPEKHSIIDRIIMPESIEKHGVNWIGVDFLVFNSYIWWMNTVSIKVL 250

[Close]
BLAST of CmoCh04G001240 vs. NCBI nr
Match: gi|449460876|ref|XP_004148170.1| (PREDICTED: protein trichome birefringence-like 33 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 3.9e-57
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQ+VSMVCLLHSLI DDAKSMETFDSLT+FTAKEYN TIE
Sbjct: 144 LMLEALRGKRMMFVGDSLNRGQFVSMVCLLHSLIPDDAKSMETFDSLTVFTAKEYNATIE 203

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAVIHRISDRIVRR SINKHGRHWK VDIMVFNTYLWW+TG NMKIL
Sbjct: 204 FYWAPFLLESNSDNAVIHRISDRIVRRGSINKHGRHWKGVDIMVFNTYLWWMTGLNMKIL 263

[Close]
BLAST of CmoCh04G001240 vs. NCBI nr
Match: gi|659109721|ref|XP_008454841.1| (PREDICTED: protein trichome birefringence-like 33 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 4.7e-55
Identity = 107/120 (89.17%), Postives = 113/120 (94.17%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQ+VSMVCLL SLI DDAKSM TFDSLT+FTAKE+N TIE
Sbjct: 143 LMLEALRGKRMMFVGDSLNRGQFVSMVCLLQSLIPDDAKSMATFDSLTVFTAKEFNATIE 202

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAVIHRISDRIVRR SINKHGRHWK VDIMVFNTYLWW+TG NMKIL
Sbjct: 203 FYWAPFLLESNSDNAVIHRISDRIVRRGSINKHGRHWKGVDIMVFNTYLWWMTGLNMKIL 262

[Close]
BLAST of CmoCh04G001240 vs. NCBI nr
Match: gi|359486373|ref|XP_002277384.2| (PREDICTED: protein trichome birefringence-like 33 [Vitis vinifera])

HSP 1 Score: 219.2 bits (557), Expect = 4.0e-54
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQYVSMVCLLHSLI +DAKSMETFDSLTIFTAKEYN TIE
Sbjct: 135 LMLETLRGKRMMFVGDSLNRGQYVSMVCLLHSLIPEDAKSMETFDSLTIFTAKEYNATIE 194

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSD+AVIHR+SDRIVR+ SINKHG++WK VDI+VFNTYLWW+TG  MKIL
Sbjct: 195 FYWAPFLLESNSDDAVIHRVSDRIVRKGSINKHGKYWKGVDILVFNTYLWWMTGLKMKIL 254

[Close]
BLAST of CmoCh04G001240 vs. NCBI nr
Match: gi|802546738|ref|XP_012086714.1| (PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas])

HSP 1 Score: 218.8 bits (556), Expect = 5.2e-54
Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQYVSMVCLLH LI +DAKSMETFDSLTIFTAKEYN TIE
Sbjct: 138 LMLETLRGKRMMFVGDSLNRGQYVSMVCLLHRLIPEDAKSMETFDSLTIFTAKEYNATIE 197

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAV+HRISDRIVR+ SINKHG++WK VDI+VFNTYLWW+TG  MKIL
Sbjct: 198 FYWAPFLLESNSDNAVVHRISDRIVRKGSINKHGKNWKGVDILVFNTYLWWMTGLKMKIL 257

[Close]
BLAST of CmoCh04G001240 vs. NCBI nr
Match: gi|922357182|ref|XP_003616693.2| (trichome birefringence-like protein [Medicago truncatula])

HSP 1 Score: 218.0 bits (554), Expect = 8.9e-54
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 1 

Query: 1   MMLESLRGKRMMFVGDSLNRGQYVSMVCLLHSLIADDAKSMETFDSLTIFTAKEYNMTIE 60
           +MLE+LRGKRMMFVGDSLNRGQYVS VCLLH LI +DAKSMETFDSLT+FTAKEYN TIE
Sbjct: 143 LMLETLRGKRMMFVGDSLNRGQYVSFVCLLHQLIPEDAKSMETFDSLTVFTAKEYNATIE 202

Query: 61  FYWAPFLLESNSDNAVIHRISDRIVRRDSINKHGRHWKRVDIMVFNTYLWWITGSNMKIL 120
           FYWAPFLLESNSDNAV+HRISDRIVR+ SINKHGR+WK VDI+VFNTYLWW+TG  MKIL
Sbjct: 203 FYWAPFLLESNSDNAVVHRISDRIVRKGSINKHGRNWKGVDILVFNTYLWWMTGLEMKIL 262

The following BLAST results are available for this feature:
BLAST of CmoCh04G001240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TBL33_ARATH9.2e-5175.83Protein trichome birefringence-like 33 OS=Arabidopsis thaliana GN=TBL33 PE=2 SV=... [more]
TBL32_ARATH1.6e-5075.83Protein trichome birefringence-like 32 OS=Arabidopsis thaliana GN=TBL32 PE=2 SV=... [more]
TBL35_ARATH1.4e-3562.73Protein trichome birefringence-like 35 OS=Arabidopsis thaliana GN=TBL35 PE=2 SV=... [more]
TBL29_ARATH7.1e-3555.83Protein ESKIMO 1 OS=Arabidopsis thaliana GN=ESK1 PE=1 SV=1[more]
TBL28_ARATH1.3e-3355.00Protein trichome birefringence-like 28 OS=Arabidopsis thaliana GN=TBL28 PE=2 SV=... [more]
BLAST of CmoCh04G001240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM73_CUCSA2.7e-5791.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G217170 PE=4 SV=1[more]
D7T4I9_VITVI2.8e-5486.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01930 PE=4 SV=... [more]
A0A067LJA3_JATCU3.6e-5486.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01200 PE=4 SV=1[more]
G7K771_MEDTR6.2e-5485.83Trichome birefringence-like protein OS=Medicago truncatula GN=MTR_5g083260 PE=4 ... [more]
G7J2C5_MEDTR8.1e-5484.17Trichome birefringence-like protein OS=Medicago truncatula GN=MTR_3g071650 PE=4 ... [more]
BLAST of CmoCh04G001240 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40320.15.2e-5275.83 TRICHOME BIREFRINGENCE-LIKE 33[more]
AT3G11030.18.9e-5275.83 TRICHOME BIREFRINGENCE-LIKE 32[more]
AT5G01620.38.1e-3762.73 TRICHOME BIREFRINGENCE-LIKE 35[more]
AT3G55990.14.0e-3655.83 Plant protein of unknown function (DUF828)[more]
AT2G40150.17.5e-3555.00 TRICHOME BIREFRINGENCE-LIKE 28[more]
BLAST of CmoCh04G001240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460876|ref|XP_004148170.1|3.9e-5791.67PREDICTED: protein trichome birefringence-like 33 [Cucumis sativus][more]
gi|659109721|ref|XP_008454841.1|4.7e-5589.17PREDICTED: protein trichome birefringence-like 33 [Cucumis melo][more]
gi|359486373|ref|XP_002277384.2|4.0e-5486.67PREDICTED: protein trichome birefringence-like 33 [Vitis vinifera][more]
gi|802546738|ref|XP_012086714.1|5.2e-5486.67PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas][more]
gi|922357182|ref|XP_003616693.2|8.9e-5485.83trichome birefringence-like protein [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026057PC-Esterase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G001240.1CmoCh04G001240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026057PC-EsterasePFAMPF13839PC-Esterasecoord: 2..115
score: 3.0
NoneNo IPR availablePANTHERPTHR32285:SF62PROTEIN TRICHOME BIREFRINGENCE-LIKE 33coord: 1..120
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G001240Cucurbita moschata (Rifu)cmocmoB187
CmoCh04G001240Cucurbita moschata (Rifu)cmocmoB464
CmoCh04G001240Cucumber (Gy14) v1cgycmoB0401
CmoCh04G001240Cucurbita maxima (Rimu)cmacmoB239
CmoCh04G001240Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G001240Cucurbita maxima (Rimu)cmacmoB731
CmoCh04G001240Wild cucumber (PI 183967)cmocpiB747
CmoCh04G001240Wild cucumber (PI 183967)cmocpiB692
CmoCh04G001240Cucumber (Chinese Long) v2cmocuB678
CmoCh04G001240Cucumber (Chinese Long) v2cmocuB737
CmoCh04G001240Melon (DHL92) v3.5.1cmomeB635
CmoCh04G001240Melon (DHL92) v3.5.1cmomeB661
CmoCh04G001240Watermelon (Charleston Gray)cmowcgB649
CmoCh04G001240Watermelon (Charleston Gray)cmowcgB676
CmoCh04G001240Watermelon (97103) v1cmowmB669
CmoCh04G001240Watermelon (97103) v1cmowmB685
CmoCh04G001240Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G001240Cucurbita pepo (Zucchini)cmocpeB674
CmoCh04G001240Cucurbita pepo (Zucchini)cmocpeB695
CmoCh04G001240Bottle gourd (USVL1VR-Ls)cmolsiB639
CmoCh04G001240Bottle gourd (USVL1VR-Ls)cmolsiB663
CmoCh04G001240Cucumber (Gy14) v2cgybcmoB125
CmoCh04G001240Cucumber (Gy14) v2cgybcmoB652
CmoCh04G001240Melon (DHL92) v3.6.1cmomedB722
CmoCh04G001240Silver-seed gourdcarcmoB0924
CmoCh04G001240Silver-seed gourdcarcmoB1219
CmoCh04G001240Cucumber (Chinese Long) v3cmocucB0806
CmoCh04G001240Cucumber (Chinese Long) v3cmocucB0873
CmoCh04G001240Watermelon (97103) v2cmowmbB721
CmoCh04G001240Watermelon (97103) v2cmowmbB755
CmoCh04G001240Wax gourdcmowgoB0884
CmoCh04G001240Wax gourdcmowgoB0889