CmoCh04G000730 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGAGTGGCCTAAGTTGTGCGTCCACCGGTGTGGTTCCTCCTACACTAACAACGCCATGTAGTTCCACAAAGCGAACACAAAGAGAGAGAGAGAGAGGGAGAGAGAGGGAAAAGAAAAGTCTTTGCATAAAATGAGTCAGTCCCCTGAACCCAGAAAAAAAGGGGGCAAAATGTGAAGAAAACTCCTCACGACGAATTGATTTTTATTAATATTTTGTTCTCTTTTTCAATTTGGGTCTTTATCGGATTGGATTGTATTGGATTGGATTGGATTGGATTTGGGTTGCCAACTTTTACAATTAATTCCTTGGAATTTGGCCGAGTTCTAATCCCGATTGCCCCTTTCCATTGTTGGTGTTCTGTTTAATTTCATTGGTTTTGGTTCTTCTTTTTGCAATTTTATTATTGGGAAAACTTCCGAGCAGAGATGTTCCGATTCGAGCAGGAGAAGCTCCGAAAACGCATTTGATATTTCCTTATTGGTTTCTTTGATCACTTGAATTTGTTCAGTGCTCTTAGGGTCTGATATGGCTGATGCTCACTTTGTCATGCCGGCATTTGTGCTACGAAACCTCTCTGATAAACTCTATGAGAAACGGAAGAACGCTGCTCTTGAGGTCTACTTCCCAACCCGCTCCATCAATTTAAAATTTCTAGGGTTTTCATTGTCTGTAATCTTTCAAGGGCTGCATTGCGCTTGTAGGTTGAGGGAGTTGTGAAGCAACTTGCGTCGGCTGGAGATCATGAGAGGATTACGGCAGTTATTAATCTGCTGACCAACGAATTCACTATGTCTCCTCAAGCGAATCATAGAAAGGTATGAGCTGAATGCCAAAATGAATGCTTCTGATAGTTCAGGTTTGCCTTTGAGACTTTGTGTACTTGGTGAAGTCTTCATTTTATTATCATTAAATTTCGGTTTATTATCATTTTAAACTTTTTGGAATTTGCTTGATTTTAAACTTTCAATTTCATTTTGTAGGGAGGATTGATAGGACTTGCAGCTGCAACTGTTGGCTTGACTTCCGATGCGTCCCAACATCTCGAGGTTAGATTTTCTTAGGCGATTTTGTAATTGAGTTTTATAGTTGAGTTCATCACTGAGTTCTCATAGGCTATTGCCGTCACTTGGTATAAATAAGTATTTAGTAATTGTACTTGAAGAGTTTATTTGTTAGAAGATGGATATGTTATCGACAAAGATTGTGTTTGGTTTATTAGGTGGATATGTTATCCCAACTCTGCTGCTTGTAGCCTCAAACTATTGAATTGTAGAGATTCTGACTAACAATTTGGGAGAATGGCATATGAAACTTGATCTGTTTCTTATCTCTCTTCAAGTGGTGCAATTTTAAGAGCTTTTTCTTGTTGTTGATATATAACTTGTATCGTTGCTAAATAAAGCAGACATATTTTTTCTGTTTTCTTCCATTTTGGCGATGTTATCATGTTCTAGTTTTTCCGTCTAATGTAATTAACTTTACAGCAAATTGTACCTCCTGTGCTCAATTCTTTTTCTGATCAAGATAGCAGAGTACGATATTATGCATGTGAAGCTCTATACAACATTGCAAAGGTGAGAAAAATTATCAGATCTGTTAATATGCTTTTGGGACTAAGCTGAATGTACTTCTATTGCTGCAGGTTGTTAGAGGGGATTTTATAGTTTTCTTTAACCAGATATTTGATGCCTTATGTAAGCTTTCAGCTGATTCAGATGCCAACGTACAAAGTGCTGCTCATCTATTAGATCGACTTGTCAAGGTACTCTCAATTATGACCAACACCCCCCCCCCCAAAAAAAAAAAAAGAAAAAAAAGAAAGAATAATTCCATGTTTCAGACATTCTCTGATTCACCATGGACTGAGTGGAACACCACAATATTTGAAGAATACAAGCAGTTTTGTTTATCTTTGGATCTTGTACAACATATGCCCTCTTTTGGGCTGCTTTACATGTATACATATGGTCTATTGTATTTAGTCTGCCTACCTCGTTGATGTAAATTGGCCCTCCCTAAAGTTTAGGGAGATGTCTTGTTTCCTTTCTCTCTGTTTTGACATCCACTTTGTCTAAATGGGAATTTCCCTTTGTTTTTAACTAATTTTATAAATTAAATGGAACAGGATATCGTTACTGAAAGTGACCAGTTCAGGTACGCCATCATTTCTCAAACTGCATGGTTTAACTATTTTATTGAAGGTTACATTTAAGAAGCATTGGTTTGAAATTGTATTGCAAAGATGTATTTGTTTATACATTATTTTCTGGTGATCTTCTTTCTACAGCATCGAAGAGTTTATTCCATTGCTGAGGGAGCGTATGAATGTCCTAAATCCATATGTCCGTCAGTTTTTGGTTGGATGGATCACTGTACTTGATAGTGTGCCAGATATCGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTGATTGTTTCTGTTAATGACATTTCTTTTAATATGTAATTTCTTCTCTTTTGTTTATTGAATGTAGAGTAAATGGTTTGAAGAGCAATATTTCTATAAAGTTTTTTCTGCTAAATGTTTACAATTTATAAATCTGTGATGAATCTCAGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATCCGGCAACAAGCTGATTCTGCTCTTTCTGAGTTTCTCCAAGAGATCGAGAGTTCTCCAGTAAGGTTACTTAGCCTGAAATTGATGCACTCTTTTATAATTACTCTGTAGCCAGAGGCATTTCCATTATTACGCTGATGGGAGTTCTTTTAGTTTTTATTAGCTTTTTGGCTCTAGGTGTTGGTGTCTCTTCTTTTGTATTTTTCTTGTTTTGATTGAAGATTTTTGGCTTCTTATATGAAAATTTAGGCTCGGGGATAACTACAATATTTTTTATACTCCGTTTTAGGCTTAGGGATTCCTCATCCCTAAGGCCTTTATGCTGCGCTCTTCCTCTCTTGATGTTTATTTGATTTCCTTGTTTCCCATTAAAAACGAGGAATTACGCGCAACCATGCAAATGTAAAAATTGATTTAATAATTACCATCTATTTTTTTCAATTTTTTTCCCTTGTATGTTCAAAATTTATTTGTCCATTTAATAATTTTCTGACTCGAGCAGTGCTACTCTTGAAGTCTGTAGATTATGGCCGAATGGTTGAGATTCTTGTCCAGAGGGCTTCTTCTTCAGATGAATTTACTCGCTTAACAGCCATTATATGGGTATGGGTACTTTGGACTTGACCATCCATCATTTATTATTTTAATTTCTCTAAGATTCAACAAAACTTGACACATTCTCACTTTATTATGGGATCCTTCCTAACTCTCTCAAGAACCGATAGAGATTTCTTTATATTGTGCATTATTTTTAAAATTTATAGTTTTCTTTTATTTGCAGATTAACGAGTTTGTGAAACTTGGTGGAGATCAACTAGTACCTTATTATGCAGATATTCTAGGAGCAATTCTACCTTCCATAGCCGACAAAGAAGAGAAGATTAGAGTGGTAAGATTTATCTTCCCCCTTTTTACTGTTACTTGCCATGGACGCATACAATGCACGTAATTTGATCCTGTTATTTATGCTTTTATGTCTGTTTTAACCATCAGTTATAGTTTTTATAGTATGTTTTTCATTATCTTTTATATAAGATTGTTGCAATGAAATATTAG CAGAGTGGCCTAAGTTGTGCGTCCACCGGTGTGGTTCCTCCTACACTAACAACGCCATGTAGTTCCACAAAGCGAACACAAAGAGAGAGAGAGAGAGGGAGAGAGAGGGAAAAGAAAAGTCTTTGCATAAAATGAGTCAGTCCCCTGAACCCAGAAAAAAAGGGGGCAAAATGTGAAGAAAACTCCTCACGACGAATTGATTTTTATTAATATTTTGTTCTCTTTTTCAATTTGGGTCTTTATCGGATTGGATTGTATTGGATTGGATTGGATTGGATTTGGGTTGCCAACTTTTACAATTAATTCCTTGGAATTTGGCCGAGTTCTAATCCCGATTGCCCCTTTCCATTGTTGGTGTTCTGTTTAATTTCATTGGTTTTGGTTCTTCTTTTTGCAATTTTATTATTGGGAAAACTTCCGAGCAGAGATGTTCCGATTCGAGCAGGAGAAGCTCCGAAAACGCATTTGATATTTCCTTATTGGTTTCTTTGATCACTTGAATTTGTTCAGTGCTCTTAGGGTCTGATATGGCTGATGCTCACTTTGTCATGCCGGCATTTGTGCTACGAAACCTCTCTGATAAACTCTATGAGAAACGGAAGAACGCTGCTCTTGAGGTTGAGGGAGTTGTGAAGCAACTTGCGTCGGCTGGAGATCATGAGAGGATTACGGCAGTTATTAATCTGCTGACCAACGAATTCACTATGTCTCCTCAAGCGAATCATAGAAAGGGAGGATTGATAGGACTTGCAGCTGCAACTGTTGGCTTGACTTCCGATGCGTCCCAACATCTCGAGCAAATTGTACCTCCTGTGCTCAATTCTTTTTCTGATCAAGATAGCAGAGTACGATATTATGCATGTGAAGCTCTATACAACATTGCAAAGATATTTGATGCCTTATGTAAGCTTTCAGCTGATTCAGATGCCAACGTACAAAGTGCTGCTCATCTATTAGATCGACTTGTCAAGGATATCGTTACTGAAAGTGACCAGTTCAGCATCGAAGAGTTTATTCCATTGCTGAGGGAGCGTATGAATGTCCTAAATCCATATGTCCGTCAGTTTTTGGTTGGATGGATCACTGTACTTGATAGTGTGCCAGATATCGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATCCGGCAACAAGCTGATTCTGCTCTTTCTGAGTTTCTCCAAGAGATCGAGAGTTCTCCAATTAACGAGTTTGTGAAACTTGGTGGAGATCAACTAGTACCTTATTATGCAGATATTCTAGGAGCAATTCTACCTTCCATAGCCGACAAAGAAGAGAAGATTAGAGTGATTGTTGCAATGAAATATTAG ATGGCTGATGCTCACTTTGTCATGCCGGCATTTGTGCTACGAAACCTCTCTGATAAACTCTATGAGAAACGGAAGAACGCTGCTCTTGAGGTTGAGGGAGTTGTGAAGCAACTTGCGTCGGCTGGAGATCATGAGAGGATTACGGCAGTTATTAATCTGCTGACCAACGAATTCACTATGTCTCCTCAAGCGAATCATAGAAAGGGAGGATTGATAGGACTTGCAGCTGCAACTGTTGGCTTGACTTCCGATGCGTCCCAACATCTCGAGCAAATTGTACCTCCTGTGCTCAATTCTTTTTCTGATCAAGATAGCAGAGTACGATATTATGCATGTGAAGCTCTATACAACATTGCAAAGATATTTGATGCCTTATGTAAGCTTTCAGCTGATTCAGATGCCAACGTACAAAGTGCTGCTCATCTATTAGATCGACTTGTCAAGGATATCGTTACTGAAAGTGACCAGTTCAGCATCGAAGAGTTTATTCCATTGCTGAGGGAGCGTATGAATGTCCTAAATCCATATGTCCGTCAGTTTTTGGTTGGATGGATCACTGTACTTGATAGTGTGCCAGATATCGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATCCGGCAACAAGCTGATTCTGCTCTTTCTGAGTTTCTCCAAGAGATCGAGAGTTCTCCAATTAACGAGTTTGTGAAACTTGGTGGAGATCAACTAGTACCTTATTATGCAGATATTCTAGGAGCAATTCTACCTTCCATAGCCGACAAAGAAGAGAAGATTAGAGTGATTGTTGCAATGAAATATTAG
BLAST of CmoCh04G000730 vs. Swiss-Prot
Match: VAC14_ARATH (Protein VAC14 homolog OS=Arabidopsis thaliana GN=VAC14 PE=1 SV=2) HSP 1 Score: 446.4 bits (1147), Expect = 2.2e-124 Identity = 237/315 (75.24%), Postives = 257/315 (81.59%), Query Frame = 1
BLAST of CmoCh04G000730 vs. Swiss-Prot
Match: VAC14_CHICK (Protein VAC14 homolog OS=Gallus gallus GN=VAC14 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.5e-67 Identity = 138/307 (44.95%), Postives = 198/307 (64.50%), Query Frame = 1
BLAST of CmoCh04G000730 vs. Swiss-Prot
Match: VAC14_XENLA (Protein VAC14 homolog OS=Xenopus laevis GN=vac14 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 5.6e-67 Identity = 136/307 (44.30%), Postives = 196/307 (63.84%), Query Frame = 1
BLAST of CmoCh04G000730 vs. Swiss-Prot
Match: VAC14_HUMAN (Protein VAC14 homolog OS=Homo sapiens GN=VAC14 PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.6e-66 Identity = 136/307 (44.30%), Postives = 195/307 (63.52%), Query Frame = 1
BLAST of CmoCh04G000730 vs. Swiss-Prot
Match: VAC14_BOVIN (Protein VAC14 homolog OS=Bos taurus GN=VAC14 PE=2 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.6e-66 Identity = 136/310 (43.87%), Postives = 195/310 (62.90%), Query Frame = 1
BLAST of CmoCh04G000730 vs. TrEMBL
Match: A0A061E7W8_THECC (ARM repeat superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_011046 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 9.1e-133 Identity = 257/315 (81.59%), Postives = 268/315 (85.08%), Query Frame = 1
BLAST of CmoCh04G000730 vs. TrEMBL
Match: A0A061EFL7_THECC (ARM repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_011046 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 9.1e-133 Identity = 257/315 (81.59%), Postives = 268/315 (85.08%), Query Frame = 1
BLAST of CmoCh04G000730 vs. TrEMBL
Match: A0A096S458_MAIZE (Uncharacterized protein OS=Zea mays GN=LOC100381815 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.2e-132 Identity = 246/285 (86.32%), Postives = 263/285 (92.28%), Query Frame = 1
BLAST of CmoCh04G000730 vs. TrEMBL
Match: A0A0E0KAQ1_ORYPU (Uncharacterized protein OS=Oryza punctata PE=4 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 2.7e-132 Identity = 245/285 (85.96%), Postives = 264/285 (92.63%), Query Frame = 1
BLAST of CmoCh04G000730 vs. TrEMBL
Match: A0A0B2Q990_GLYSO (Protein VAC14 like OS=Glycine soja GN=glysoja_002631 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 4.5e-132 Identity = 254/315 (80.63%), Postives = 268/315 (85.08%), Query Frame = 1
BLAST of CmoCh04G000730 vs. TAIR10
Match: AT2G01690.2 (AT2G01690.2 ARM repeat superfamily protein) HSP 1 Score: 441.8 bits (1135), Expect = 3.1e-124 Identity = 237/316 (75.00%), Postives = 257/316 (81.33%), Query Frame = 1
BLAST of CmoCh04G000730 vs. NCBI nr
Match: gi|449449244|ref|XP_004142375.1| (PREDICTED: protein VAC14 homolog [Cucumis sativus]) HSP 1 Score: 494.6 bits (1272), Expect = 1.1e-136 Identity = 264/315 (83.81%), Postives = 272/315 (86.35%), Query Frame = 1
BLAST of CmoCh04G000730 vs. NCBI nr
Match: gi|659129530|ref|XP_008464719.1| (PREDICTED: protein VAC14 homolog [Cucumis melo]) HSP 1 Score: 494.6 bits (1272), Expect = 1.1e-136 Identity = 264/315 (83.81%), Postives = 272/315 (86.35%), Query Frame = 1
BLAST of CmoCh04G000730 vs. NCBI nr
Match: gi|590696796|ref|XP_007045262.1| (ARM repeat superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-132 Identity = 257/315 (81.59%), Postives = 268/315 (85.08%), Query Frame = 1
BLAST of CmoCh04G000730 vs. NCBI nr
Match: gi|590696799|ref|XP_007045263.1| (ARM repeat superfamily protein isoform 2 [Theobroma cacao]) HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-132 Identity = 257/315 (81.59%), Postives = 268/315 (85.08%), Query Frame = 1
BLAST of CmoCh04G000730 vs. NCBI nr
Match: gi|414865585|tpg|DAA44142.1| (TPA: hypothetical protein ZEAMMB73_355698 [Zea mays]) HSP 1 Score: 480.7 bits (1236), Expect = 1.7e-132 Identity = 246/285 (86.32%), Postives = 263/285 (92.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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