CmoCh04G000340 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGACAATTCTTCAGGGCTCTCAAAAGGCATTTACCATTATCTTTGATTTGGATTGCAGTTTTTTAAATTTAGTTGAGCAATATAGCAATAAAGATATATGTTGATGTTAGTTTCTGTTCGATGTAGTATTTTAAATCTCCATTTTTAGTGAATTTTACAGATAGAAGAATAGAATCCATCCCCTCATTGCTTCAAGATCTCATTGATTGCTTGGTTCGGGAGCAAGTGATGACAGTGAAACCAGATTCCTGCATCATTGACTTTTATAACGAGGTCACTAATCAAACGCGTACTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAGTTTTCGTTAGTATATGTTCCAGACTAATATTCTTATTGGTTGATATCCTCAGGGTGATCATTCTCAGCCTCATGTCTGGCCACCATGGTTTGGGAGGCCTGTGGGTGTCCTCCTTTTGACTGAATGTGAAATGACCTTTGGTAGAGTAATTGGTTCAGACCATTCTGGCAATTATAGAGGGGCTAAGACATTGTCTCTTGCACCGGGGTGGGTAACTATTTTATTCTTAATCTGCATATTTCTCTCAACCTTCTTTCATCCTCTGCCTCATATTTACATTTTTTCTGTCTACTTTTACTTTCTTATGTTGATCGTCCTCTTCCTGCTATGTACTGTCTGTGTTTTATTGTAAAACACAGGAGCCTCCTTGTGGTGCAAGGAAAATCTGCAGATTTTGCTAAGCATGCAATTCCTGCTATGCGCAAGCAACGGATACTTGTTACCTTGACCAAATCACAACCAAGAAGAGCAGGACCAGCTGATGGGCAACGCACATCTTTGAATGTAGGTTCATATTCCAGTTGGGGCCCTCCATCTGCTAGATCACCCAATGCTCGTCCTTGCCCGGGACAGAAGCATTACCCTATGGGTCCATCGACAGGCGTTCTACCTGTGCCACCCATTCGTCCCCAATTGCCACCGCCAAATGGCATCCCACCAATAATGGTGGCTCCTGTAGCACCACCACCTATGCCTTTCCCTCCCGTGCCAATTCCAACTGGTCCACCTGCATGGCCTGCTGCTCATCCAAGGCATCCTCCGCCTCGTCTCCCTGTTCCTGGCACTGGAGTATTCCTTCCTCCAGGTTCTTCCAGTGCTCCATCTCCTCAACAGATGCCAAACTCCGCAGTGGAGACGAGTTCCCTTGCAGAAAAGGAAAATGGTCCGACGGAAGCTGATCACAATGCAGGTGCTTCTCCAGGGGAAAAACCTCACATGGATGGAAGTGGGAGTTGTAAAAAGACGGAGGAAGAACAACCAAAGCAGCAGGAGGAGGAGGAGAAAGGTGAGAACGTAGAGGCCCAAAATGCAGGAGGTGGAGAAGCTTAAAGACAGAGAAAAATGCATTACTTAAAAGAGAGAGAAAAGAGAGAAGAAAAGCAGGTCGGCTGCAGACTTGAATGAGTTACAAGCAAAATGTAGATAGCGGCAACATTCAAAGACTGATACTACCATCAAACTGCTACTACCATCAAGGAGAACGAGGGAGTTCCCTTTCAAAATCCTTTACTTCATTCCTTTTTTCTGTTGTCCAAAACAATTATTGGTTAGATGGGAAAACTCATTCCTAATGCCACTTCGGATATTATCTTCTTCTTCTTTAAGAGAGATTTTGAAAAGTCACAATATTTTTTACGTTCCAAACGTAGAAACATAACTCTGGTATATCATGGATGAAGATTAACCACACTCTTTAACGTAATTTCAAATGGATGTCCTTTATCTCCCA ATGACGACAATTCTTCAGGGCTCTCAAAAGGCATTTACCATTATCTTTGATTTGGATTGCAATAGAAGAATAGAATCCATCCCCTCATTGCTTCAAGATCTCATTGATTGCTTGGTTCGGGAGCAAGTGATGACAGTGAAACCAGATTCCTGCATCATTGACTTTTATAACGAGGGTGATCATTCTCAGCCTCATGTCTGGCCACCATGGTTTGGGAGGCCTGTGGGTGTCCTCCTTTTGACTGAATGTGAAATGACCTTTGGTAGAGTAATTGGTTCAGACCATTCTGGCAATTATAGAGGGGCTAAGACATTGTCTCTTGCACCGGGGAGCCTCCTTGTGGTGCAAGGAAAATCTGCAGATTTTGCTAAGCATGCAATTCCTGCTATGCGCAAGCAACGGATACTTGTTACCTTGACCAAATCACAACCAAGAAGAGCAGGACCAGCTGATGGGCAACGCACATCTTTGAATGTAGGTTCATATTCCAGTTGGGGCCCTCCATCTGCTAGATCACCCAATGCTCGTCCTTGCCCGGGACAGAAGCATTACCCTATGGGTCCATCGACAGGCGTTCTACCTGTGCCACCCATTCGTCCCCAATTGCCACCGCCAAATGGCATCCCACCAATAATGGTGGCTCCTGTAGCACCACCACCTATGCCTTTCCCTCCCGTGCCAATTCCAACTGGTCCACCTGCATGGCCTGCTGCTCATCCAAGGCATCCTCCGCCTCGTCTCCCTGTTCCTGGCACTGGAGTATTCCTTCCTCCAGGTTCTTCCAGTGCTCCATCTCCTCAACAGATGCCAAACTCCGCAGTGGAGACGAGTTCCCTTGCAGAAAAGGAAAATGGTCCGACGGAAGCTGATCACAATGCAGGTGCTTCTCCAGGGGAAAAACCTCACATGGATGGAAGTGGGAGTTGTAAAAAGACGGAGGAAGAACAACCAAAGCAGCAGGAGGAGGAGGAGAAAGGTGAGAACGTAGAGGCCCAAAATGCAGGAGGTGGAGAAGCTTAAAGACAGAGAAAAATGCATTACTTAAAAGAGAGAGAAAAGAGAGAAGAAAAGCAGGTCGGCTGCAGACTTGAATGAGTTACAAGCAAAATGTAGATAGCGGCAACATTCAAAGACTGATACTACCATCAAACTGCTACTACCATCAAGGAGAACGAGGGAGTTCCCTTTCAAAATCCTTTACTTCATTCCTTTTTTCTGTTGTCCAAAACAATTATTGGTTAGATGGGAAAACTCATTCCTAATGCCACTTCGGATATTATCTTCTTCTTCTTTAAGAGAGATTTTGAAAAGTCACAATATTTTTTACGTTCCAAACGTAGAAACATAACTCTGGTATATCATGGATGAAGATTAACCACACTCTTTAACGTAATTTCAAATGGATGTCCTTTATCTCCCA ATGACGACAATTCTTCAGGGCTCTCAAAAGGCATTTACCATTATCTTTGATTTGGATTGCAATAGAAGAATAGAATCCATCCCCTCATTGCTTCAAGATCTCATTGATTGCTTGGTTCGGGAGCAAGTGATGACAGTGAAACCAGATTCCTGCATCATTGACTTTTATAACGAGGGTGATCATTCTCAGCCTCATGTCTGGCCACCATGGTTTGGGAGGCCTGTGGGTGTCCTCCTTTTGACTGAATGTGAAATGACCTTTGGTAGAGTAATTGGTTCAGACCATTCTGGCAATTATAGAGGGGCTAAGACATTGTCTCTTGCACCGGGGAGCCTCCTTGTGGTGCAAGGAAAATCTGCAGATTTTGCTAAGCATGCAATTCCTGCTATGCGCAAGCAACGGATACTTGTTACCTTGACCAAATCACAACCAAGAAGAGCAGGACCAGCTGATGGGCAACGCACATCTTTGAATGTAGGTTCATATTCCAGTTGGGGCCCTCCATCTGCTAGATCACCCAATGCTCGTCCTTGCCCGGGACAGAAGCATTACCCTATGGGTCCATCGACAGGCGTTCTACCTGTGCCACCCATTCGTCCCCAATTGCCACCGCCAAATGGCATCCCACCAATAATGGTGGCTCCTGTAGCACCACCACCTATGCCTTTCCCTCCCGTGCCAATTCCAACTGGTCCACCTGCATGGCCTGCTGCTCATCCAAGGCATCCTCCGCCTCGTCTCCCTGTTCCTGGCACTGGAGTATTCCTTCCTCCAGGTTCTTCCAGTGCTCCATCTCCTCAACAGATGCCAAACTCCGCAGTGGAGACGAGTTCCCTTGCAGAAAAGGAAAATGGTCCGACGGAAGCTGATCACAATGCAGGTGCTTCTCCAGGGGAAAAACCTCACATGGATGGAAGTGGGAGTTGTAAAAAGACGGAGGAAGAACAACCAAAGCAGCAGGAGGAGGAGGAGAAAGGTGAGAACGTAGAGGCCCAAAATGCAGGAGGTGGAGAAGCTTAA
BLAST of CmoCh04G000340 vs. TrEMBL
Match: A0A0A0KIW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G056090 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.9e-125 Identity = 247/326 (75.77%), Postives = 273/326 (83.74%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TrEMBL
Match: A5BBI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002198 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 6.4e-88 Identity = 191/320 (59.69%), Postives = 229/320 (71.56%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TrEMBL
Match: F6HFA9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06270 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 4.1e-87 Identity = 193/333 (57.96%), Postives = 236/333 (70.87%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TrEMBL
Match: W9S2C1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019288 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.9e-84 Identity = 188/321 (58.57%), Postives = 220/321 (68.54%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TrEMBL
Match: B9SNI0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1150230 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 6.2e-83 Identity = 175/289 (60.55%), Postives = 213/289 (73.70%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TAIR10
Match: AT1G14710.1 (AT1G14710.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 239.6 bits (610), Expect = 2.9e-63 Identity = 140/253 (55.34%), Postives = 176/253 (69.57%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TAIR10
Match: AT2G48080.1 (AT2G48080.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 109.4 bits (272), Expect = 4.5e-24 Identity = 59/171 (34.50%), Postives = 95/171 (55.56%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TAIR10
Match: AT4G02940.1 (AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 98.2 bits (243), Expect = 1.0e-20 Identity = 86/255 (33.73%), Postives = 131/255 (51.37%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TAIR10
Match: AT2G17970.1 (AT2G17970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 86.7 bits (213), Expect = 3.1e-17 Identity = 44/121 (36.36%), Postives = 73/121 (60.33%), Query Frame = 1
BLAST of CmoCh04G000340 vs. TAIR10
Match: AT1G48980.1 (AT1G48980.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 81.6 bits (200), Expect = 9.9e-16 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 1
BLAST of CmoCh04G000340 vs. NCBI nr
Match: gi|449449076|ref|XP_004142291.1| (PREDICTED: uncharacterized protein LOC101210274 isoform X2 [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 4.2e-125 Identity = 247/326 (75.77%), Postives = 273/326 (83.74%), Query Frame = 1
BLAST of CmoCh04G000340 vs. NCBI nr
Match: gi|700194493|gb|KGN49670.1| (hypothetical protein Csa_5G056090 [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 4.2e-125 Identity = 247/326 (75.77%), Postives = 273/326 (83.74%), Query Frame = 1
BLAST of CmoCh04G000340 vs. NCBI nr
Match: gi|778698245|ref|XP_011654491.1| (PREDICTED: uncharacterized protein LOC101210274 isoform X1 [Cucumis sativus]) HSP 1 Score: 456.1 bits (1172), Expect = 5.5e-125 Identity = 246/323 (76.16%), Postives = 272/323 (84.21%), Query Frame = 1
BLAST of CmoCh04G000340 vs. NCBI nr
Match: gi|659109443|ref|XP_008454723.1| (PREDICTED: uncharacterized protein LOC103495063 isoform X2 [Cucumis melo]) HSP 1 Score: 454.5 bits (1168), Expect = 1.6e-124 Identity = 247/326 (75.77%), Postives = 271/326 (83.13%), Query Frame = 1
BLAST of CmoCh04G000340 vs. NCBI nr
Match: gi|659109441|ref|XP_008454722.1| (PREDICTED: uncharacterized protein LOC103495063 isoform X1 [Cucumis melo]) HSP 1 Score: 454.1 bits (1167), Expect = 2.1e-124 Identity = 246/323 (76.16%), Postives = 270/323 (83.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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