CmoCh04G000190 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G000190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	IAA-ALANINE RESISTANCE protein 1
Location	Cmo_Chr04 : 97060 .. 108196 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAAGAAAGTTCAGCACATCCCTAAGATCGCGTCAAGGTCTCTCTACTGAAACAAAAAATACTCGGGGAGAGAGGGAGAGATAAAAATGGATGTAGTGACGTTCGGCATCATTGTCGGCATAATCCTCCTCTTCTTAGTGGCCATTTGCTACATCACCATTCAGGGCACCTGCAAATCCGCTTAATCCTTCTTCTACCTTCTCTCCAATCCAACCATTTACTACTCCCTCGATCCTCCGCCCCGCCCGGATTCTCCTTTATTCAATCTCCTTCTCACCCTCTTCACAACATGCCCAACCGGAATCTTCTTCTCCTCATTTCTGCTTCTCTTCTTCTCTTAGGGTTCCTTTTGGATCTCACCTTTGCGCACGCCTCCCACGGGCATCACCATTGTACCCATGCCCACGGAGACCACTCCCACGCCCACGACCATCACCATCACGATCACCATCACCATCGGCATGGGGAGGATCTGTCCGTTCGGTCCAAGCTGCTGCCGGAGGAGCTGGCGGAGGAGGAGGATATGAAGCTTTTTGGGTTTGGCAGACCCTATATCAATGTTGATCATCAAAGTGTTGAATCTTCCGAGCTCTCTGGTTTGGGTACTTTCTTCAATTGCGTCTTAATGGATGTGCATTCTGTTTTATTTTCTGCGTATTTCTTTGGAGTTTATATTCGGTTATTTTGTTCTGTGTTCTGCTGGTGCTCCGAAAACTTCTAATTCTAGTGTTCTTGTGTTTTCCGGGGAAGATAGATAGTTCTCAATCTCGATTGTTTGAATTTGAAATGGAAGCTATGCCTGCTGGAACTAAGTCGGTTGTTTCTATCTCCAAGGATCCTTCCAACTTCACGCACAACTGTTTATGTTCTGCTTGAACTTATTTCCGTTTGATGTATGATAAAATACCATCCACGTTCATTCATCTTGCTTTTTTGTTATCTGGTTCTTCGGTGATCTTGCAGTAAAATAATTCAAGTACCATTCTTGTTTCTTATGTATGGTAGTTGTATTTAGTACAACTTCTCTGTTTCTCCAGTGATGGTTAAGCATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTTTCCCTATAGATCTTTGGGTTCGTGCATTGGGCTGTTCACTGTTGATTAGCATGGCATCTCTTATTTGCCTAGTACTCCTTCCAGTGATTTTTGGTGAGTGACTTTGCGTTAAATGCACATGTATTCTTATCTCATGGCTTATGTAATTGACTTTTTTTTTAGTCTAAAGTGGTGTTTTATGGGTAAGAAAAACTTATGCCATCCCGACAACTGAAATGTTGAATTATTGTAGTTCGAGGCAAACCATCCAAAGGAATCGTCGACTCATTGGCACTATTTGGGGTCAGACTCTTTTAGCCTCTTATTCCTAATAGGAATTTTTTAATTTCTTAATAACTTGATTTATGAAGTTCTGATTTTAATGTCAACTGTATGTATTTTGTTTTATAATGAGCTATGCTGAAATGATGAGGATATTTCTGTTATGTGAGGGGAAGCATGGTCTTGGGGTTTCATATTCACATTGGTCTATTTACCTTGATATTTGAAGTATGTTTATAAGGCAATGGAGCTGTATAGCTTAACTTTCAGATGATTTTATTTGGTTTCTATATCTTGTAACTTTTAATTTTAATTTATTTATAAGTGGGTAAAATATGAAAAAGGTCCCTGTGCTGCTAGCAATTAAATCGATGATACCTTTTAAATCACATTGCTGTTCCTTAAGCTCGGGGACACATATTTTCATCCAGATGTGTTACCCTTTTCTCTAACCTTCAACACCATACTAGCCTAGAAGGCTTGAACACATAAAATTGAGTTGTGGAAATATACTTACAGTAGGTGGACAGTTTTATAGAAATCTGGAGGGAGAATAAAGGACTGAAATGTTTTAACTTGAGGTTCTAACCAGGAGATGGTCTCTATAGTTTCTAGATTCCACTTGGATGCTCATATAAACTGATTTTTTTTCTGTTGTAGGCAGGGGCTATGTTAGGGGATGCCTTTCTCCATCAGTTGCCTCATGCATTTGGTAAGGAAACAGATCGATGCCATTTCAATATCTTGAAAATGTCTTCCCTAGTCCTTCACCTTTGACAATTATTGTTTCTGTTTCCTACTATTAAATTAAAGGTCAGTATGTGCAAAAATGTGGTGGGATGCACCGAATGAATTAGTAATTGCAAATGTATTGAGAATCTAGTCATTATTGCTTATTTCATGCTTTTAAATTGTAAATATAGGGTGTATCCAGGGTTTTTTATTTTATTTAATTCAACAACATGGGGGACCATTTGGAGGGAATTTAGATACTTGGCATCTTTGGATGCCCGCTTTTAGTCAAGCAAATGCGACCTCAAAGACACGTTATATGGGTACATTGCTAGTATGCCATGAATTAGGTTCATGGACGTGAGTAAAGTATTGCCACTCTGCATGTATATGTGTGCCTTGGGGGATTGTGTGCTGACGTTGGTTTACTACTTTTTTAGGGTCACATGGGACTTAAATGGGCTACCATGATACATATTGGAGTTGAGGAGTGTCTTTCTATGGGAATGGAAACTTTGAGGAGAATGTTGGGTGGTTTGGGTGTGCATATACTGATATTCTACTCCTTTCAATGGTTTAAAGGTTTGATACTAGAATGGAGTTTAGAGATGAGTATCTAAAAGTGAATCGACATGGGTATGGGTATGGGTGTCAACATGCTTCACGAAGCCCAAATGGATGTTCAAGACCACCCTTAACACAATACACAGAGTCTTGGGCTAGTTACTTGTAAATGCTCCTTGGCATGAAGTATAGTGAGACAACCCCTCTTATCATGATTTTGGTCAATGTGACCTCATAAAGCATTAGTCGGCATGAGACAAAATGTAATAAAATGGTCGTGGTCTAGGTGAGATGTAAGATTCATCTTAAAGGAGTCATGACTTGGTGTAGGAGCAAAATGATCATGAAGCCATGAAAAGTTGTCGATGCAACGGCCATGTCAGAGTATTCAAGGGATCATGGCTCAATGTAAAGGTCAATGAAATCTTTGGTCGTGGCTTGTAGTAGAGGCCAGTTAGGTAGAGGTGTTGTTAAGAAAAATGCATATATGGGTAATGTGTACGTCCAAGAGTCTAAAGAGATGTGTGCATAGTTGTTAGCACAACCTTGAGGTTAGGCTAACGATAAGCTGAGGGATGCTTATCCATGTCGGCAGTTTGAGTGCATGCTTAAGATGCAATTTTATGCGAGCTATAGAGTTCAACCAAAGGGTACAGAACTTTGTCTTAAGTTTTATGGATCTAGAAATGCTCAAGATGTGAGTTTTTGGTCTAGAGTAGCCCTATTGTTGACTATGGTTTAGGTAGAATCATGTCACTGTATGGTCCAAGATGGTGAGATAATGAAATTTGGTAGTGGTCTTTTAGAGATGTTTTTTTGGTGCTAAGTTGAACCATGAAAGCCTACAAGAGAATAGAAAAGTGTGTCATAATGTCTATGATGATAGGGTAGTTGTAGTTCTCACTACTTAGCATCAGAGATAGTGTAGTGTCAATTGTGTTGAAGTCTTGGCTCCCACCCACGGGTTCTCAGTACTTGCAAGAGGCTATGAGTTAAAACTATAGAGAAAGGAAGAATTAGGTTGGACTGCTCAAGGTCTTCGGGCTTCAGGCTTCAGATATATGCAAAGTTATTAGATGACAAGGTTCTAGGAATGCTCTCAAGAGTAGTAGAGGAGTGTTGGCAGAATGCAGAGCAAGTCACAAACAATGCTTACCCATATTGCAGTCCTCAACAAGGCCCATGTCTACCCCTATTGACGTTATTTATGTGATAGCCTAGGTACTCACCTTCGTAGAAAGAGTTATCTATCCGAACAATATTCTTATTGATCTATTAACAACAAGTAGATGTTAGAAGGATATGCAATGTGTCGAAGAGAAATTAGTGTTAAAGTATTTGATATAGTCTAAATTTACCATAATCCATCAGCTTAAACTTTTGGCTTAATTGATGATTGAACATGGCATAAAAGCAGGAGGTCCTGCCTATAATGTTATTTCCTTAATATTGATTCCCCTTGTTAGACAGATATATGCAAAATTAGTAAATGACAAAGTTCTAGGAATGCTCTCAAGAGTAGTAGAGGAGTGTTGGCTGAATGCAGAGCAAGTCACAAGGCAATGCTTACCCATATTGCAGTCCTCAACAAGGCCCTTGTTTACCCCTATTGACGTTATTTATGTGATAGCCTAGGTACTCACCTTCGTAGAAAAAGTTGTCTATCCGAACAATATTCTTATTGATCTATTAACAAGTAGATGTTAGAAGAATATGCAATGTGTCAGAGAAATTGGTGTTAAAGTATTTGATATAGTCTGAATTTACCATAATCCATCAGCTTAAACTTTTGTGTTAATTGATGATTGAACATGGCATGAAAGCAGGAGGTCCTGCCTATAATGTTATTTCCTTAATATTGATTCCCCTTGTTAGACCTTCTATTAATTTCTAAGCCCACAATTAAGGTGTGTTAAAGTATTGAGAAATTGATATAAGATTGAAGTTACCATCGCCCTTCAAACTTTAGCATTGGTGATTTAACAATTGATACAAGAAACCGTGGTTATGCTTCTTGATAATGGAATCAGAACAAGAAGAAGAAGAATCCGAAGACCAGAAGGGGTAGTTGGAATTTTGTAATGTAGGAATTTATGAAGAGGTACACACAACATTTGCCAAGATAAAATGAATACATGTAATTGGATTCAAAGGAGAAACCCTCAGTTGAGAATTACCCCTGCCTGGTGTGTTCTGTTTAGATCAGGTTGGGAAAATCATCTGCATTTGTTCTTCCAGTGCTCATTTGCTGTTGCCATGTGGTATAGATTCTTGAACGTCTTTGGTCTGAGTTGCAGTTTCTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCTCTTTCGGGCTTTCCCTCAAGGTTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGATTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACCCCCCTTCAGGGTCCAGCGTCCTCGCTGGCACTCGTTCCTTTATCCAATTGATGTGGGACCGCCCCCAAATCCACCCCCCTTTGGGGCCCAGCGTCCTTACTGGCACACTGCCTCGTATCTACCCCCCTTCGGGGAATAGCGAGAAGGCCGGCACATCATCCGATGACTGGCTCTGATACAACCACATTGGTTGGGGAGGAGAACGAATCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTTGTGACAGTTTCCCAGCTAGCTGGAAGGTTGTCGTTCATCATCTCTTATTTGGGTCTCCCTTGGTCCTCTGGTTTAATGCAATGGCTGCTCTGATTTGGAGGTTGTGGCTTGAAATAAATCTAAAAGTCTACCAAGGGAAGACAAAAATTTAAGGTTTTTGGGACTTAGTCAGTGTGTTTCCTCTAGTTGGTACTCTTTTACCTGTAATTTTTGTAACTGTATCTTCGCGCGGATCAATTCCCATGGGAAATCCTTATAATCCATTGGCTTTATGAGGATAGCTCATTCCATTTTTTGTATGATCTCTTTAGGATCTATATATCCCTCAAGTTTCTAAATTATATGAAAATAAGAAGGAAAAGAGCTTTTTTTTTTTCTTGTTTTCAGGTGGTAACTTTTATCAAACTGTATTCTGTAATGTGTCTTCTTTTTCGATAGCTGGTTGATGGAACTGTTCCTCACTTTTTAAAAGAATCGTGAGATGGCTTATCCTCTCTTTCTTTATATTTTATCGAGTCTGCAATGCAAAGTTGTTCATTATAAAGAATGAAACATGGTGCTTTTTTGCGATGAGAACATCCATGATTCAGCAATAAATTTTATTTTCTTGAACCAATTTTTTTATGGGATCGGTTTTTATCTGGCAGGTGGTGACAAGCACTCCCACTCGCATGCTGACCATCAACATCATGGTCACTCAGGAGAAAACCATTCACATGCTCATTCTTTGGAAGATCTTTCTGTAGGAATATCTGTCCTTGGTTAGTTTCATACATCATGTGTTTTACAGACATTGTTGCATACATCTGTTGTTTGTTTTCTTAAAGAAACTTGATTTGTTATTTATTATGATTGCTAGTTGTAAATGTGGGACTTTTAGTGCATTTGTCTCTGTTTCAGTTGTTTTGAGGAGCACGCATAGTTTTAATCTTGTTAAGTTTACTTTAATTGGTTCTGTTTCTATGCTTCTTTATATCTTGTTATCTGCTGAAAAATTTATATTGGTCCACAATTTATCAAAATATTAGATGCGTAAGAGAAAGACTTCAATGGAGAATAAAGGGCAGACTGGGACACAGTCTGATATGCATTTTTTTATTTGCCAAGGCAATTCACATTTAGAACCAAACGTGATGCAGCTTTGGAAGAATGATTCCATGGAGACATAATGGAGATGGCAAATTGGTGCTGAATTTTTTAAAGAGTATTAGTGACATCTACCCATTGAATTTTATTTTACTTTTATTGTATATTACTTGAGGTATTTCTCCATGGAGAGGGTTCATAATGACATATCTTGTTCATCGAGCTTAGTTTGTGGTTATCATTGAGTTTGATTCAAGCTTTGTTAATTTTTTTCACTCTATTTTTAAGTCAATATTGCTCGCCATGTTTCTCTTCTTTTTCTATGTAAGCCCTTTCCCCAGCTTGTTTGCTTTGTCCAATTATGGCCTCACTTAACCTAGCCCGTAACCACCTCTGGTTTTCCCTTCAATTGTAAACATCTTTCAAGTTATCTAAACGTTGAATGTACGCACCAACACTAGCTGTGAGGAAACTGAAGGTGCGGAAAGGGCCTTTCAATTCATAGTTGGAACTCTCCTTTGAGTTATCTTGGCATCCCCCTAGAGGATAACTCAAACATAAGCTAAGGAAACTGATTCTAGATAAAATTCATAGAAGCTGATGTGGAAAATAGTTATTATGCATAATAGGGTAGACTTCTAGCACAATCTGTCAGGACCTAAAAGGTAATTAAAATAAGCATATTGTATGACAGGTCCTTCATGCAGAGTTAATACCCTGGATAGGGAGTACCTGAAGACCTCGATCATTTTTCCAGACTTGTGTGTTCACTTGCTCAGTTTGGAGTTATATTTTTCGGTTCTTCAGTCTTAGCTTGGTTCAATCTAGAGATTGTTGCTCCATGTTGGAGGAGTTTTTCCTTCACTCAACCCTTTCGTGATAAGGGTTGTTTTTTTGTGGCTTGCCATCTTTTGTGCTATTTTATGTGGTGTTTGAAGTGAAAGAAAGAATAGAGTTAATAGAAGGGTTGAAATTCCTTGTTAGGTTCCATGTCCACCTTTGGGCCTTGGTGTGTAAGCTCCGATGGTGTAAAGAACTACCATGGATCGAGTTAGTGATACCATGACATATGATAAAAATAAGAAGATTTTTGGGGAATGAGATCAAACCTATGGTGTCAACTTATCTAGGATATTAAATTCCTAGAGTTTCTAGCCTACTAATATGGTTGCTAGTTGGTTGTCTTGTGAGATTAGTGAATTGGTGTCTTCTATCGCGAAGAGAAAATTAATGGTGTGTGGCCTTATTTAGAAATTTTTTTAATGTATTGTTACTAATTAAGGGTGAGATCTTGTCTAGTTCCTTGATTATATATTTTATTGTGTGGTAATATTATTAAAAGATCACCATTCTAAGAAAAGAACACAACGGTAAAATTCGTTTTATTAGTTAGATATTGATTAAAGTGCAACAGAAGTGATCAATAATTATTTCATCTTTTACTTTCCTCTCATTTAGGTTTTGTTTATTTCTCCTTTCAAAAATGAAATCTGGACTGTAAAGCATTTTTTGAGTAACTATATACTGAATTGGTGATGCAGCTGGAATTGTCCTTTTTCTTCTAGTGGAGAAGGTAGTAAGGTATGTGGAAGATAATTCTGCAGGAGGAAATGAATGGAGCCATGGTCATCACCACCACCATAACAATAAAAAATGGAAGGATGATAGCGATTATCATGACACCACTGATAAAAAAAGCAAGGACAAACTGGAATTGGATGCAGTGCCAAATAACTCGAAAGAAGATAAGGTTAATCCACAGAGATCCATCCCTCAGAAGGTAAGCTGTTGAGTTGGCATAACCTTTTATATAGCAATATAGAACTTGTTTGATCTTTTTAAGAAACAGATTGGCCTCATATAAATTTAATATTATATTTGTAATGAATATAATGGATATATTTATCTGCCTAGGAGGATTAGAAGAAGCTCCTTCAATATAAATTAATAAAAATGCTGCTGTAATTAGAAGTCACTATGATTGGCATTGGTAACTGCTGTGCATTTTCCAGAAGTCATTGAAAAACTCAAGTCAGTTTAAAGATTCTATTAATTCTTTCTAACCACAAGGACCAAATCAAGTCCTCAGAGCAGTATTCGACAAAATTCTAGCTTTCTGCTTCAAGCACTTCCAAAAGTCGTAGGTGACATTGTTTCTAGAGACAGAATGAAGATGCTCCTTTTACTATCAATATTATAACCATTTGTGGCAATTGGGTTTCCTCTTGTTGTATTTCAATGAAAACCATTCTCAGGTTTATATGGTTCAGCCGTGGCACCCCTCAAGACTTCTATATCAAATTTATTGTCGTCTTGAACAGACTTCTGATGTCAACACCACTAATAGTCAATAACTACGAAGATTTACATGTTCATATAATCGTGAAATGTTACTATTCTTATTATAAAATTGTCAAGTGTCACTATTGGTGTATTTGGTTGAACTACTAATTACAGGACAACTTCATTAAATGAATGTACCTAAGTTTTTGATATATCTTCTCTGACTTACTAGACTTATGCAGAGAATTGGAAAATCTGCTTCCAGAGATGTTAAGCAAGATCTAGATGCTGCTAATGGCACCACTGCTGACGTCAAAACATCACAAGAATTCCCAGCTAAGACACCGTCAAATTTAGTGTTTGGTTATCTCAATCTCTTCTCAGATGGCGTTGTATGTTTATCTCGATGCTTAACTTCTTCCATATTGGCGTTCAAACTTCCTGTTTAATTTTTATTATTTTCCTGTAAAAATGATTGAACTTCAATATAATCCAGTTGTAGGAGACTATTGATATATACTTGAGGGTTAATATTTGTTGGCGTTGCAGCACAATTTCACTGATGGGATGGCCTTAGGAAGTGCTTTCTTACTATATGGATCAGTTGGTGGGTGGTCCAGAACTGTGTTTCTGCTTGCACACGAGCTCCCGCAAGAGGTTCATCTTCTTTCTTGATTATCATTATTGGAATATCAGGCACTTCATTCGATCATCTTGGTAACTGAGAAAGATAACATCCTCTGGTCAAGTCAAGCCATTCTCCCTGATACTTTTTCACGTTAAAATTACATTTCATCTTTGATTAAATTGTCTTCTTTATTTCCCCAATTTTTTCGTAAAAGGCGTGCCTGTCTGTCTTTAACCCTGGGATTTGTGCCCGTTTTCATCTTTTCTTATCTCAGTTTTGACCAAGCTTCTAAGTTCTAGCTTTAAACAATGGGTTTTGGATTCAATATTTCTGTTCCCTTACTTTCCTGTCACTTGGCATGCGCATGATTATTTGTCACATAATCCCGAGGATAAAATTAGCAAATGTGGTTCATCCTGTACAATAGCTCCATGTACTTCATAAATCATGCTATTGAGTGATGTCGTTAAGCTCAGCTAGAGAAATTTGTAAAATTGGAAGGTATGTTTGTTTATGAATCTGATTCTTGCGGTTTGGTTAAATCATCTACATGTGTACTTCAGTTTTTTTTTTCTTCTTAATGGAGGTACAAATAAAAACTAAAAATCAGCTATACTTTGCCAATTGAACCATTGTTGATTGAACCATCTGTCTCTACCTTGTGAGCTTATTAGGAATTTATGTAACTCTGCAATATCCCACTAGTCACCAGTCATGATTGCTGTCTAGCACGGGACATTGTAGCGTTACAAACCGGACAGCACCCATGATTTATGAACTTCAGTTTTTTTTTTGTCAGTATGTTCTTATGATGCAACACGTATCTCCTTTTCATTGTTTCATTTATCGTTTTATGTGTTTGGTTAGTTTTTGAGTGTCTGCTTTTGGTACAGATTGGCGATTTTGGTATTTTGGTCAGATCCGGTTTCAGTGTTGTCAAAGCCCTTTTCTTCAACTTCCTCTCAGCACTCGTGGCTCTTGCAGGAACTGCATTAGTAAGTACTTTTTCTGTAAGCGCTGTATAATATCATTCCATGAAGGTGAATAGACCATGTAATTATCGATCTACTATGACATCCGTAGGCACTGCTAATGGGGAAGGATCCAGGACACTCATCTTTGATCGAGGTGAGAAATAGCTGCTGAAACTCTGTATTGTGTTCGCTTAGGACTAATTCTTATTGAGACGATTTAAACATCCTCAGGGCTTCACCGCTGGTGGCTTCATATACATTGCGGTTGCTGGAGTGCTAGCCGAAATGAATAGTAACAGTAAACCAACAGTAAGAACAACCGCGCTTCAATTAACTTCACTTGTACTGGGAATGGCTGTCGCGCTTGGTATTTCACTTGTTGAATAAATCAGAGTACATTTAGGTGGGCTCTATGTGTTCATAGCTGTACTTGGCTCCCCGCATATACACACTGATTAAACTAAATATGTTCATATTTGATCCATTTTTGTATCTGTTTAGTAACCATCAATTAGTGTAGTTCGAAGGGATGGCAATTGAAAGATACAGCCGTTGATCTTATAATGGGAGACTCGCAGATCTGTGTTCTTTTGCAAGATTTATATGCCTTCTCTCTTAGACTTTATTTCTCTTTCGAATTTAACAATCTTTCTCAAACATATCCATCCCTCGAATTCATCTAATTAAAAATGCAATGGAG

mRNA sequence

AAAAGAAAAGAAAGTTCAGCACATCCCTAAGATCGCGTCAAGGTCTCTCTACTGAAACAAAAAATACTCGGGGAGAGAGGGAGAGATAAAAATGGATGTAGTGACGTTCGGCATCATTGTCGGCATAATCCTCCTCTTCTTAGTGGCCATTTGCTACATCACCATTCAGGGCACCTGCAAATCCGCTTAATCCTTCTTCTACCTTCTCTCCAATCCAACCATTTACTACTCCCTCGATCCTCCGCCCCGCCCGGATTCTCCTTTATTCAATCTCCTTCTCACCCTCTTCACAACATGCCCAACCGGAATCTTCTTCTCCTCATTTCTGCTTCTCTTCTTCTCTTAGGGTTCCTTTTGGATCTCACCTTTGCGCACGCCTCCCACGGGCATCACCATTGTACCCATGCCCACGGAGACCACTCCCACGCCCACGACCATCACCATCACGATCACCATCACCATCGGCATGGGGAGGATCTGTCCGTTCGGTCCAAGCTGCTGCCGGAGGAGCTGGCGGAGGAGGAGGATATGAAGCTTTTTGGGTTTGGCAGACCCTATATCAATGTTGATCATCAAAGTGTTGAATCTTCCGAGCTCTCTGGTTTGGATCTTTGGGTTCGTGCATTGGGCTGTTCACTGTTGATTAGCATGGCATCTCTTATTTGCCTAGTACTCCTTCCAGTGATTTTTGGCAGGGGCTATGTTAGGGGATGCCTTTCTCCATCAGTTGCCTCATGCATTTGGTCAGTATGTGCAAAAATGTGGTGGGATGCACCGAATGAATTAGTAATTGCAAATGTTCATGGACGTGAGATAGTATTCAAGGGATCATGGCTCAATGTAAAGTTTGAGTGCATGCTTAAGATGCAATTTTATGCGAGCTATAGAGTTCAACCAAAGGGTACAGAACTTTGTCTTAAGTTTTATGGATCTAGAAATGCTCAAGATAACAAGAAGAAGAAGAATCCGAAGACCAGAAGGGGTGGTGACAAGCACTCCCACTCGCATGCTGACCATCAACATCATGGTCACTCAGGAGAAAACCATTCACATGCTCATTCTTTGGAAGATCTTTCTGTAGGAATATCTGTCCTTGCTGGAATTGTCCTTTTTCTTCTAGTGGAGAAGGTAGTAAGGTATGTGGAAGATAATTCTGCAGGAGGAAATGAATGGAGCCATGGTCATCACCACCACCATAACAATAAAAAATGGAAGGATGATAGCGATTATCATGACACCACTGATAAAAAAAGCAAGGACAAACTGGAATTGGATGCAGTGCCAAATAACTCGAAAGAAGATAAGGTTAATCCACAGAGATCCATCCCTCAGAAGGTAAGCTAAGTCATTGAAAAACTCAAACTTATGCAGAGAATTGGAAAATCTGCTTCCAGAGATGTTAAGCAAGATCTAGATGCTGCTAATGGCACCACTGCTGACGTCAAAACATCACAAGAATTCCCAGCTAAGACACCGTCAAATTTAGTGTTTGGTTATCTCAATCTCTTCTCAGATGGCGTTCACAATTTCACTGATGGGATGGCCTTAGGAAGTGCTTTCTTACTATATGGATCAGTTGGTGGGTGGTCCAGAACTGTGTTTCTGCTTGCACACGAGCTCCCGCAAGAGATTGGCGATTTTGGTATTTTGGTCAGATCCGGTTTCAGTGTTGTCAAAGCCCTTTTCTTCAACTTCCTCTCAGCACTCGTGGCTCTTGCAGGAACTGCATTAGCACTGCTAATGGGGAAGGATCCAGGACACTCATCTTTGATCGAGGGCTTCACCGCTGGTGGCTTCATATACATTGCGGTTGCTGGAGTGCTAGCCGAAATGAATAGTAACAGTAAACCAACAGTAAGAACAACCGCGCTTCAATTAACTTCACTTGTACTGGGAATGGCTGTCGCGCTTGGTATTTCACTTGTTGAATAAATCAGAGTACATTTAGGTGGGCTCTATGTGTTCATAGCTGTACTTGGCTCCCCGCATATACACACTGATTAAACTAAATATGTTCATATTTGATCCATTTTTGTATCTGTTTAGTAACCATCAATTAGTGTAGTTCGAAGGGATGGCAATTGAAAGATACAGCCGTTGATCTTATAATGGGAGACTCGCAGATCTGTGTTCTTTTGCAAGATTTATATGCCTTCTCTCTTAGACTTTATTTCTCTTTCGAATTTAACAATCTTTCTCAAACATATCCATCCCTCGAATTCATCTAATTAAAAATGCAATGGAG

Coding sequence (CDS)

ATGCCCAACCGGAATCTTCTTCTCCTCATTTCTGCTTCTCTTCTTCTCTTAGGGTTCCTTTTGGATCTCACCTTTGCGCACGCCTCCCACGGGCATCACCATTGTACCCATGCCCACGGAGACCACTCCCACGCCCACGACCATCACCATCACGATCACCATCACCATCGGCATGGGGAGGATCTGTCCGTTCGGTCCAAGCTGCTGCCGGAGGAGCTGGCGGAGGAGGAGGATATGAAGCTTTTTGGGTTTGGCAGACCCTATATCAATGTTGATCATCAAAGTGTTGAATCTTCCGAGCTCTCTGGTTTGGATCTTTGGGTTCGTGCATTGGGCTGTTCACTGTTGATTAGCATGGCATCTCTTATTTGCCTAGTACTCCTTCCAGTGATTTTTGGCAGGGGCTATGTTAGGGGATGCCTTTCTCCATCAGTTGCCTCATGCATTTGGTCAGTATGTGCAAAAATGTGGTGGGATGCACCGAATGAATTAGTAATTGCAAATGTTCATGGACGTGAGATAGTATTCAAGGGATCATGGCTCAATGTAAAGTTTGAGTGCATGCTTAAGATGCAATTTTATGCGAGCTATAGAGTTCAACCAAAGGGTACAGAACTTTGTCTTAAGTTTTATGGATCTAGAAATGCTCAAGATAACAAGAAGAAGAAGAATCCGAAGACCAGAAGGGGTGGTGACAAGCACTCCCACTCGCATGCTGACCATCAACATCATGGTCACTCAGGAGAAAACCATTCACATGCTCATTCTTTGGAAGATCTTTCTGTAGGAATATCTGTCCTTGCTGGAATTGTCCTTTTTCTTCTAGTGGAGAAGGTAGTAAGGTATGTGGAAGATAATTCTGCAGGAGGAAATGAATGGAGCCATGGTCATCACCACCACCATAACAATAAAAAATGGAAGGATGATAGCGATTATCATGACACCACTGATAAAAAAAGCAAGGACAAACTGGAATTGGATGCAGTGCCAAATAACTCGAAAGAAGATAAGGTTAATCCACAGAGATCCATCCCTCAGAAGGTAAGCTAA

Homology

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BLAST of CmoCh04G000190 vs. Swiss-Prot
Match: IAR1_ARATH (IAA-alanine resistance protein 1 OS=Arabidopsis thaliana GN=IAR1 PE=1 SV=3)

HSP 1 Score: 97.4 bits (241), Expect = 3.2e-19
Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 1


Query: 231 GDKHSHS---HADHQHHGHS-GENHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDN 290
           G  HSHS   H +H HH HS  ++ SH+HS++DLSVG+SVLAGIV+FLLVEK+VRYVE+N
Sbjct: 168 GGGHSHSNDHHENHDHHDHSHSDSPSHSHSIQDLSVGLSVLAGIVVFLLVEKLVRYVEEN 227

Query: 291 SAGGNEWSHGHHHHH-NNKKWKDDSDYHDTTDKKSKDKLELDAVPNNSKE 336
           S+G N W H HHHHH  +KK KD+ D H+  D++S      DA+ N+S++
Sbjct: 228 SSGSNTWGHHHHHHHAGSKKLKDEGD-HNNLDQQSSS----DAIVNSSEK 272

[Close]

BLAST of CmoCh04G000190 vs. Swiss-Prot
Match: HKE42_CAEBR (Histidine-rich membrane protein KE4 homolog 2 OS=Caenorhabditis briggsae GN=hke-4.2 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 4.1e-06
Identity = 43/101 (42.57%), Postives = 55/101 (54.46%), Query Frame = 1


Query: 225 PKTRRGGDKHSHSHADHQHHGHSGENHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVE 284
           P     GD H HSH+    HG +G    H+H   D+SVG  VLAGI+ FL VEK+VR + 
Sbjct: 223 PHATPAGDGHGHSHSHGHSHGGAG---GHSHGAHDMSVGGWVLAGIIAFLTVEKLVRILR 282

Query: 285 DNSAGGNEWSHGHHHHHNNKKWKDDSDYHDTTDKKSKDKLE 326
                G+  SHGH H    K+ K+  D  D+ DK SK + E
Sbjct: 283 GGEGHGH--SHGHSHGGEKKETKETKD-KDSKDKDSKKEKE 317

[Close]

BLAST of CmoCh04G000190 vs. Swiss-Prot
Match: HKE41_CAEBR (Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis briggsae GN=hke-4.1 PE=3 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.0e-06
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 234 HSHSHADHQH---HGHSGENHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDNSAGG 293
           HSH   DH H   H H+  +HSH HS + L VGI V+AGI++F++VE++VR ++      
Sbjct: 139 HSHGAHDHDHAHSHDHAHNDHSHDHS-DQLRVGIYVIAGILVFMMVEQLVRIIKGGHCHS 198

Query: 294 NEWSH-----------GHHHHHNNKK 306
           +E  H            HHHHHN +K
Sbjct: 199 HENGHIVADEHRHLNDDHHHHHNGEK 223

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BLAST of CmoCh04G000190 vs. TrEMBL
Match: A0A0A0KQS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G257690 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.1e-38
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 230 GGDKHSHSHADHQHHGHSGE--NHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDNS 289
           GG KHSHSHADH  H HS +  +HSHAH+LEDLSVGISVLAGIVLFLLVEK+VRYVEDNS
Sbjct: 159 GGGKHSHSHADHHGHSHSEDEHSHSHAHTLEDLSVGISVLAGIVLFLLVEKIVRYVEDNS 218

Query: 290 AGGNEWSHGHHHHHNNKKWKDDSDYHDTTDKKSKDKLELDAVPNNSKEDKVNPQRSIPQK 348
            GGN+WSH HHHHH NKK KDDSD HDTTDKK + KL LD VPN+SKED+  PQ+S+P+K
Sbjct: 219 EGGNDWSHSHHHHHKNKKLKDDSDSHDTTDKKGRAKL-LDGVPNDSKEDQGTPQKSVPRK 277

[Close]

BLAST of CmoCh04G000190 vs. TrEMBL
Match: M8A078_TRIUA (IAA-alanine resistance protein 1 OS=Triticum urartu GN=TRIUR3_31920 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.4e-28
Identity = 134/367 (36.51%), Postives = 181/367 (49.32%), Query Frame = 1


Query: 13  SLLLLGFLLDLTFAHASH---------GHHHCTHAHGDHSHA---------HDHHHHDHH 72
           SLLLL  LL     H            GH    H H DH H+         H+HHHH  H
Sbjct: 7   SLLLLAALLAAAAGHGDSSASSCPFHGGHDEEPHEHHDHGHSCGGALDDSNHEHHHHHSH 66

Query: 73  HHRHGEDLSVRSKLLPEELAEEEDMKLFGFG----------RPYINVDHQSVESSELSGL 132
           HHR  +++    +LLPEELAEE D++L GF             +I+ D Q  ES+ +  L
Sbjct: 67  HHR--DEIQ---RLLPEELAEEADLELEGFDHDHHHHHDHHHDHIHRDFQP-ESTPMGVL 126

Query: 133 ------------DLWVRALGCSLLISMASLICLVLLPVIFGRGYVRGCLSPSVASCIWSV 192
                        +W+RA+GCSLL+SMASL+CL+LLPVI  +G     +  ++A  ++ V
Sbjct: 127 RHDTTDNFGDLAGVWLRAMGCSLLVSMASLVCLILLPVILFQGKPSKAVVDALA--VFGV 186

Query: 193 CAKMWWDAPNELVIANVHGREIVFKGSWLNVKFECMLKMQFYASYRVQPKGTELCLKFYG 252
            A++            +  R  +    W  +     L +   A + ++  G     +   
Sbjct: 187 GAELAVVRTFLKTNIKLANRWAMAWSKWTVMTTLGRLDVLAVAQFPLRKPGVTRLRELAA 246

Query: 253 SRNAQ--DNKKKKNPKTRRGGDKHSHSHADHQHHGHSGENHSHAHSLEDLSVGISVLAGI 312
              A   D+   + P    GG  HSH+H DH H        SHAHSL+DLSVG+S+L GI
Sbjct: 247 QAGAMLGDSFLHQLPHAFGGGHSHSHNHEDHDH----AHEQSHAHSLKDLSVGLSILFGI 306

Query: 313 VLFLLVEKVVRYVEDNSAGGNEWSHGHHHHHNNKKWKDDSDYHDTTDKKSKDK-LELDAV 337
           VLF +VEK+VRYVEDNS  G   SHGHHHHH+  K +D SD   +   KS D+  + D V
Sbjct: 307 VLFFIVEKIVRYVEDNSQRGGH-SHGHHHHHH--KRQDISDKAKSGHIKSDDEGKDTDQV 358

[Close]

BLAST of CmoCh04G000190 vs. TrEMBL
Match: M4CIL7_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.9e-27
Identity = 129/350 (36.86%), Postives = 171/350 (48.86%), Query Frame = 1


Query: 4   RNLLLLISASLLLLGFLLDLTFAHASHGHHHCTHAHG----DHSHAHDHHHHDHHHHRHG 63
           R L++     +L L   ++  F+H++       H HG     HSH HDH HH+    +  
Sbjct: 6   RRLVVPFLVLVLFLDLCVETGFSHSTPAREEHVHHHGGGCSSHSHDHDHDHHEPKQMK-- 65

Query: 64  EDLSVRSKLLPEELAEEEDMKLFGFGRPYINVDHQSVESSELSGLDLWVRALGCSLLISM 123
                    LPEELAEEEDM+L GFG P ++ DHQS  SS LSG  LWV ALGCSLL+S+
Sbjct: 66  ---------LPEELAEEEDMRLCGFG-PCLHHDHQS--SSALSGFALWVNALGCSLLVSL 125

Query: 124 ASLICLVLLPVIFGRGYVRGCLSPSVASCIWSVCAKMWWDAPNELVIANVHGREIVFKGS 183
           ASLICL+LLPV+F +G              W V A   + A   L  A +H     F G 
Sbjct: 126 ASLICLILLPVMFVKG----------KPAKWFVDALALFGAGAMLGDAFLHQLPHAFGGG 185

Query: 184 WLNVKFECMLKMQFYASYRVQPKGTELCLKFYGSRNAQDNKKKKNPKTRRGGD--KHSHS 243
                                          + S N + +    +  +    D   HSHS
Sbjct: 186 -----------------------------HSHSSHNHESHVHHDHDHSHSHSDSPSHSHS 245

Query: 244 HADHQHHGHSGENHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDNSAGGNEWSHGH 303
                               +DLSVG+SVLAGIV+FLLVEK+VRYVE+NS+G N W H H
Sbjct: 246 L-------------------QDLSVGLSVLAGIVVFLLVEKLVRYVEENSSGSNTWGHQH 276

Query: 304 HHHHNNKKWKDDSDYHDTTDKKSKDKLELDAVPNNSKEDKVNPQRSIPQK 348
           HHH  +KK KD+ D H+  DK+       DA  N+S  +KV+  +S+ ++
Sbjct: 306 HHHAGSKKLKDE-DGHNNADKQCPS----DATENSS--EKVSKDKSLRKR 276

[Close]

BLAST of CmoCh04G000190 vs. TrEMBL
Match: V4MBA0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10018501mg PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.5e-27
Identity = 131/334 (39.22%), Postives = 161/334 (48.20%), Query Frame = 1


Query: 15  LLLGFLLDL---------TFAHASHGHHHCTHAHGDHSHAHDHHHHDHHHHRHGEDLSVR 74
           LLLG  LDL         T A   H HHH     G  SH+HDH H   HHH   E + ++
Sbjct: 13  LLLGLCLDLCVETGFSQSTPAREDHVHHH----GGGCSHSHDHDHD--HHHVKTEPVKMK 72

Query: 75  SKLLPEELAEEEDMKLFGFGRPYINV--DHQSVESSELSGLDLWVRALGCSLLISMASLI 134
              LPEELAEEEDM+L GFG P ++   DH    SS LSG  LW+ ALGCSLL+S+ASLI
Sbjct: 73  ---LPEELAEEEDMRLCGFG-PCLHHGHDHDHESSSSLSGFALWINALGCSLLVSLASLI 132

Query: 135 CLVLLPVIFGRGYVRGCLSPSVASCIWSVCAKMWWDAPNELVIANVHGREIVFKGSWLNV 194
           CLVLLPV+F +G       PS     W V A   + A   L  A +H     F G   + 
Sbjct: 133 CLVLLPVMFVKG------KPSK----WFVDALALFGAGAMLGDAFLHQLPHAFGGGHSH- 192

Query: 195 KFECMLKMQFYASYRVQPKGTELCLKFYGSRNAQDNKKKKNPKTRRGGDKHSHSHADHQH 254
                     + S+                 +  D+    +P        HSHS  D   
Sbjct: 193 ------SHDHHESH---------------GHHDHDHSHSDSP-------SHSHSIQDL-- 252

Query: 255 HGHSGENHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDNSAGGNEWSHGHHHHHNN 314
                            SVG+SVLAGIV+FLLVEK+VRYVE+NS+G N W H HHHHH  
Sbjct: 253 -----------------SVGLSVLAGIVVFLLVEKLVRYVEENSSGSNTWGHHHHHHHAG 277

Query: 315 KKWKDDSDYHDTTDKKSKDKLELDAVPNNSKEDK 338
            K   D D H+  DK+S     L++    S + K
Sbjct: 313 SKKLKDED-HNNVDKQSSSDAALNSSEKVSSDSK 277

[Close]

BLAST of CmoCh04G000190 vs. TrEMBL
Match: A0A0V0IKV0_SOLCH (Putative IAA-alanine resistance protein 1-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.5e-26
Identity = 103/237 (43.46%), Postives = 129/237 (54.43%), Query Frame = 1


Query: 93  HQSVESSELSGLDLWVRALGCSLLISMASLICLVLLPVIFGRGYVRGCLSPSVASCIWSV 152
           H      +L+GL LWV A+GCSLL+S+ASLICL+LLP+IF  G                 
Sbjct: 8   HDGHGVKDLTGLGLWVNAMGCSLLVSLASLICLILLPLIFIHG----------------- 67

Query: 153 CAKMWWDAPNELVIANVHGREIVFKGSWLNVKFECMLKMQFYASYRVQPKGTELCLKFYG 212
                   P++ V+ ++    +   G+ L   F   L   F    R  P         Y 
Sbjct: 68  -------KPSKAVVDSL---ALFGAGAMLGDAFLHQLPHAFGMLLRCLPMKPPA----YX 127

Query: 213 SRNAQDNKKK----KNPKTRRGGDKHSHSHADHQHHGHSGENHSHAHSLEDLSVGISVLA 272
           +  A   K +      P+   GG  HSHSH DH H  HSG  HSHAHSLEDLSVG+S+LA
Sbjct: 128 NSLAYTIKGRFAXLAAPECLGGG--HSHSHDDHLHD-HSG--HSHAHSLEDLSVGLSILA 187

Query: 273 GIVLFLLVEKVVRYVEDNSAGGNEWSHGHHHHH--NNKKWKDDSDYHDTTDKKSKDK 324
           GIVLFL+VEK+VRYVED S G NE SHGHHHHH  +  K KDD+D  D   + S++K
Sbjct: 188 GIVLFLIVEKLVRYVEDFSGGVNERSHGHHHHHHMHYTKLKDDNDADDKLQELSQEK 208

[Close]

BLAST of CmoCh04G000190 vs. TAIR10
Match: AT1G68100.1 (AT1G68100.1 ZIP metal ion transporter family)

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-20
Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 1


Query: 231 GDKHSHS---HADHQHHGHS-GENHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDN 290
           G  HSHS   H +H HH HS  ++ SH+HS++DLSVG+SVLAGIV+FLLVEK+VRYVE+N
Sbjct: 168 GGGHSHSNDHHENHDHHDHSHSDSPSHSHSIQDLSVGLSVLAGIVVFLLVEKLVRYVEEN 227

Query: 291 SAGGNEWSHGHHHHH-NNKKWKDDSDYHDTTDKKSKDKLELDAVPNNSKE 336
           S+G N W H HHHHH  +KK KD+ D H+  D++S      DA+ N+S++
Sbjct: 228 SSGSNTWGHHHHHHHAGSKKLKDEGD-HNNLDQQSSS----DAIVNSSEK 272

[Close]

BLAST of CmoCh04G000190 vs. NCBI nr
Match: gi|778701718|ref|XP_011655078.1| (PREDICTED: IAA-alanine resistance protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 3.1e-38
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 230 GGDKHSHSHADHQHHGHSGE--NHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDNS 289
           GG KHSHSHADH  H HS +  +HSHAH+LEDLSVGISVLAGIVLFLLVEK+VRYVEDNS
Sbjct: 159 GGGKHSHSHADHHGHSHSEDEHSHSHAHTLEDLSVGISVLAGIVLFLLVEKIVRYVEDNS 218

Query: 290 AGGNEWSHGHHHHHNNKKWKDDSDYHDTTDKKSKDKLELDAVPNNSKEDKVNPQRSIPQK 348
            GGN+WSH HHHHH NKK KDDSD HDTTDKK + KL LD VPN+SKED+  PQ+S+P+K
Sbjct: 219 EGGNDWSHSHHHHHKNKKLKDDSDSHDTTDKKGRAKL-LDGVPNDSKEDQGTPQKSVPRK 277

[Close]

BLAST of CmoCh04G000190 vs. NCBI nr
Match: gi|778701728|ref|XP_011655080.1| (PREDICTED: IAA-alanine resistance protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 3.1e-38
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 230 GGDKHSHSHADHQHHGHSGE--NHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDNS 289
           GG KHSHSHADH  H HS +  +HSHAH+LEDLSVGISVLAGIVLFLLVEK+VRYVEDNS
Sbjct: 131 GGGKHSHSHADHHGHSHSEDEHSHSHAHTLEDLSVGISVLAGIVLFLLVEKIVRYVEDNS 190

Query: 290 AGGNEWSHGHHHHHNNKKWKDDSDYHDTTDKKSKDKLELDAVPNNSKEDKVNPQRSIPQK 348
            GGN+WSH HHHHH NKK KDDSD HDTTDKK + KL LD VPN+SKED+  PQ+S+P+K
Sbjct: 191 EGGNDWSHSHHHHHKNKKLKDDSDSHDTTDKKGRAKL-LDGVPNDSKEDQGTPQKSVPRK 249

[Close]

BLAST of CmoCh04G000190 vs. NCBI nr
Match: gi|659114023|ref|XP_008456872.1| (PREDICTED: IAA-alanine resistance protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 4.0e-38
Identity = 91/135 (67.41%), Postives = 103/135 (76.30%), Query Frame = 1


Query: 1   MPNRNLLLLISASLLLLGFLLDLTFAHASHGHHHCTHAHGDHSHAHDHHHHDHHHHRHGE 60
           MPN      I AS L+    LDL+FAH S GHH C+H+HG H HA        HHHRH +
Sbjct: 1   MPNSCFFPFIFASALVFSLFLDLSFAHGSLGHHQCSHSHGHHQHA--------HHHRHDD 60

Query: 61  DLSVRSKLLPEELAEEEDMKLFGFGRPYINVDHQSVESSELSGLDLWVRALGCSLLISMA 120
           DLSV SKLLPEELAEEEDM+L+GFGRPY+  DH+SV SS+LSGL LW+RALGCSLLISMA
Sbjct: 61  DLSVTSKLLPEELAEEEDMRLYGFGRPYVEHDHESVGSSDLSGLGLWIRALGCSLLISMA 120

Query: 121 SLICLVLLPVIFGRG 136
           SLICL+LLPVIF RG
Sbjct: 121 SLICLILLPVIFVRG 127

[Close]

BLAST of CmoCh04G000190 vs. NCBI nr
Match: gi|659114027|ref|XP_008456874.1| (PREDICTED: IAA-alanine resistance protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 2.0e-37
Identity = 90/120 (75.00%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 230 GGDKHSHSHADHQHHGHSGE--NHSHAHSLEDLSVGISVLAGIVLFLLVEKVVRYVEDNS 289
           GG KHSHSHADH  H HS +  +HSHAH+LEDLSVG+SVLAGIVLFLLVEK+VRYVEDNS
Sbjct: 131 GGGKHSHSHADHHGHSHSEDEHSHSHAHTLEDLSVGMSVLAGIVLFLLVEKIVRYVEDNS 190

Query: 290 AGGNEWSHGHHHHHNNKKWKDDSDYHDTTDKKSKDKLELDAVPNNSKEDKVNPQRSIPQK 348
            GGN+WSHGHHHHH NKK KDDSD  DTTDKK + KL LD VPN+SKED+  PQ+S+P+K
Sbjct: 191 EGGNDWSHGHHHHHKNKKLKDDSDSPDTTDKKGRAKL-LDGVPNDSKEDQGTPQKSVPRK 249

[Close]

BLAST of CmoCh04G000190 vs. NCBI nr
Match: gi|474054964|gb|EMS53784.1| (IAA-alanine resistance protein 1 [Triticum urartu])

HSP 1 Score: 134.0 bits (336), Expect = 4.9e-28
Identity = 134/367 (36.51%), Postives = 181/367 (49.32%), Query Frame = 1


Query: 13  SLLLLGFLLDLTFAHASH---------GHHHCTHAHGDHSHA---------HDHHHHDHH 72
           SLLLL  LL     H            GH    H H DH H+         H+HHHH  H
Sbjct: 7   SLLLLAALLAAAAGHGDSSASSCPFHGGHDEEPHEHHDHGHSCGGALDDSNHEHHHHHSH 66

Query: 73  HHRHGEDLSVRSKLLPEELAEEEDMKLFGFG----------RPYINVDHQSVESSELSGL 132
           HHR  +++    +LLPEELAEE D++L GF             +I+ D Q  ES+ +  L
Sbjct: 67  HHR--DEIQ---RLLPEELAEEADLELEGFDHDHHHHHDHHHDHIHRDFQP-ESTPMGVL 126

Query: 133 ------------DLWVRALGCSLLISMASLICLVLLPVIFGRGYVRGCLSPSVASCIWSV 192
                        +W+RA+GCSLL+SMASL+CL+LLPVI  +G     +  ++A  ++ V
Sbjct: 127 RHDTTDNFGDLAGVWLRAMGCSLLVSMASLVCLILLPVILFQGKPSKAVVDALA--VFGV 186

Query: 193 CAKMWWDAPNELVIANVHGREIVFKGSWLNVKFECMLKMQFYASYRVQPKGTELCLKFYG 252
            A++            +  R  +    W  +     L +   A + ++  G     +   
Sbjct: 187 GAELAVVRTFLKTNIKLANRWAMAWSKWTVMTTLGRLDVLAVAQFPLRKPGVTRLRELAA 246

Query: 253 SRNAQ--DNKKKKNPKTRRGGDKHSHSHADHQHHGHSGENHSHAHSLEDLSVGISVLAGI 312
              A   D+   + P    GG  HSH+H DH H        SHAHSL+DLSVG+S+L GI
Sbjct: 247 QAGAMLGDSFLHQLPHAFGGGHSHSHNHEDHDH----AHEQSHAHSLKDLSVGLSILFGI 306

Query: 313 VLFLLVEKVVRYVEDNSAGGNEWSHGHHHHHNNKKWKDDSDYHDTTDKKSKDK-LELDAV 337
           VLF +VEK+VRYVEDNS  G   SHGHHHHH+  K +D SD   +   KS D+  + D V
Sbjct: 307 VLFFIVEKIVRYVEDNSQRGGH-SHGHHHHHH--KRQDISDKAKSGHIKSDDEGKDTDQV 358

The following BLAST results are available for this feature:

BLAST of CmoCh04G000190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IAR1_ARATH	3.2e-19	55.45	IAA-alanine resistance protein 1 OS=Arabidopsis thaliana GN=IAR1 PE=1 SV=3	[more]
HKE42_CAEBR	4.1e-06	42.57	Histidine-rich membrane protein KE4 homolog 2 OS=Caenorhabditis briggsae GN=hke-...	[more]
HKE41_CAEBR	9.0e-06	40.70	Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis briggsae GN=hke-...	[more]

BLAST of CmoCh04G000190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQS8_CUCSA	2.1e-38	75.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G257690 PE=4 SV=1	[more]
M8A078_TRIUA	3.4e-28	36.51	IAA-alanine resistance protein 1 OS=Triticum urartu GN=TRIUR3_31920 PE=4 SV=1	[more]
M4CIL7_BRARP	2.9e-27	36.86	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
V4MBA0_EUTSA	8.5e-27	39.22	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10018501mg PE=4 SV=1	[more]
A0A0V0IKV0_SOLCH	5.5e-26	43.46	Putative IAA-alanine resistance protein 1-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of CmoCh04G000190 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68100.1	1.8e-20	55.45	ZIP metal ion transporter family	[more]

BLAST of CmoCh04G000190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778701718\|ref\|XP_011655078.1\|	3.1e-38	75.83	PREDICTED: IAA-alanine resistance protein 1 isoform X1 [Cucumis sativus]	[more]
gi\|778701728\|ref\|XP_011655080.1\|	3.1e-38	75.83	PREDICTED: IAA-alanine resistance protein 1 isoform X2 [Cucumis sativus]	[more]
gi\|659114023\|ref\|XP_008456872.1\|	4.0e-38	67.41	PREDICTED: IAA-alanine resistance protein 1 isoform X1 [Cucumis melo]	[more]
gi\|659114027\|ref\|XP_008456874.1\|	2.0e-37	75.00	PREDICTED: IAA-alanine resistance protein 1 isoform X2 [Cucumis melo]	[more]
gi\|474054964\|gb\|EMS53784.1\|	4.9e-28	36.51	IAA-alanine resistance protein 1 [Triticum urartu]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0046873	metal ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G000190.1	CmoCh04G000190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR16950	ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4	coord: 233..320 score: 6.5E-39coord: 1..154 score: 6.5
None	No IPR available	PANTHER	PTHR16950:SF16	ZINC TRANSPORTER ZIP13	coord: 233..320 score: 6.5E-39coord: 1..154 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G000190	CmaCh04G000180	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G000190	MELO3C020059	Melon (DHL92) v3.5.1	cmomeB657
CmoCh04G000190	ClCG11G000990	Watermelon (Charleston Gray)	cmowcgB627
CmoCh04G000190	CSPI05G12820	Wild cucumber (PI 183967)	cmocpiB743
CmoCh04G000190	Lsi11G000120	Bottle gourd (USVL1VR-Ls)	cmolsiB622
CmoCh04G000190	Cp4.1LG01g06600	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G000190	MELO3C020059.2	Melon (DHL92) v3.6.1	cmomedB731
CmoCh04G000190	Bhi07G000099	Wax gourd	cmowgoB0898
CmoCh04G000190	Carg21974	Silver-seed gourd	carcmoB0250

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G000190	Cucumber (Gy14) v2	cgybcmoB641
CmoCh04G000190	Silver-seed gourd	carcmoB0924
CmoCh04G000190	Cucumber (Chinese Long) v3	cmocucB0862
CmoCh04G000190	Watermelon (97103) v2	cmowmbB703
CmoCh04G000190	Cucurbita moschata (Rifu)	cmocmoB464
CmoCh04G000190	Cucurbita maxima (Rimu)	cmacmoB731
CmoCh04G000190	Wild cucumber (PI 183967)	cmocpiB760
CmoCh04G000190	Cucumber (Chinese Long) v2	cmocuB756
CmoCh04G000190	Watermelon (97103) v1	cmowmB736
CmoCh04G000190	Cucurbita pepo (Zucchini)	cmocpeB674