CmoCh03G014890 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G014890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Phenylalanine-tRNA ligase, alpha subunit
Location	Cmo_Chr03 : 10657403 .. 10662143 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTCCACCAAAGAGATAACCATCCACTTGGCATTCTGAAGAATGAGATATACAACTATTTTGATACAAATTACTCAAATAAGTTCACTAAGTTTGATGACCTCAGTCCAATCGTTTCTGTGAAGGAGGTAAGCCTTTTAAACTCATCAATTAGTTTTGAGGCTCAAATGAAGCTCATTCTATGACTATCTTTATGCCTGCGGAAATTTTAGTTTTCAGAAATGGATTAGTCCCGTAGCCAATTCGTTGAAAAATGGGTTTTACGCTGCTATAGAGCCTCTGAATTTGATATACCGCATTCTGATTAATATATCAGAGTGATTGAAGAATCTTTGATCTAGAAGGAACTAATGACAGAAAACATATGAAGGATAAAGAAATTGTGGCGTCCAGTGGTCCAAATAAGCTCATATGAAAGAGCATCTTCTGATCTCATGAAGTTCACTAACTTAACACCCTTGTATTCATTTGACTCACTAATAACCTTTTGATTTACATCTTTATTTTCTATGGAGGCCAATGTGGTCAATTTGGAATTATCAATTTTCTCTCTAGAGTAATAATAACATATTTGAAACCAATTTCAAACTTGATGGATTAATTAAAAGTTAAATGCAAATCTCGAAGACCAAGTGTATCACTTCTGAAATAACTAAACAGAAACTACATTCAAACTTTAAGGACCAAAAAGTAATTCAAATCTTGGGACCAAACACCTTAAGGACCAAATAGAACTAAATTTAATGTTCACGGACCAAAAGTTTTGGCTTTGAAATCTCAGGAACAATTAGAAGCTAAGTTCAATACTAAGGGACCGAAAGTGTATTTTTTCAAAAAAAAAAGAAACTTTCATTCTTTTCGTGATTTTTATTGAAGTACTGAACTTATTTTGGAAGATGGCGGGATCGGTTTGGTATTTGTCAACTTTCCTGTTGACTGGTCAAATTTTTTCCCTAAATTCCAATAGCTTATCGTGTTGTTTATTTATTAATTAATCATTTTATAATAACAATTATTTTTAAACATACAAAGCCTCTTGTATCTGAATCCTATAATTATGTCTGCAGAATTTTGATGATGTGTTGGTTCCAGAAGATCATGTAAGCCGAAGTTATAATGATACATACTACATTGACTCGCAAACTGTTCTGAGATGTCATACAAGTGCTCACCAAGCGGAGCTGTTGAGAAGAGGCTATACTCAGTTTCTTGTGACAGGCGATGTTTATCGTCGGGATTCCATTGATTCAACTCATTACCCTGTATTTCATCAGGTAATCTAAATAAGTTTATTAATCATGTCATTTGCTAAATTTACCATAGTTTTCACTTAATGAATTTCTTTGCCTACTTCTCAGATGGAAGGTGTCCGTGTTTTTTCTCTGAATGATTGGGAGGCATCTGGTACAGATGGAACATCTTTTGCAGCTGACGACTTGAAGAAATGTTTGGAAGGTTTGGCAAGGCATTTATTTGGTAAGAGTTGTGTATGAATTAACCCATGATTCTTCCCTTTCTATCTTAGTTATGGTTGGGGATTCTATTGAAAATTCATATGGGAATACAAACGATTTTTGGGTAGAGACAAAACAATAGCACTTGCAGAATAATCGGTTAAAAGACACAAACTGTAGAAGTAATAAGTATAATGTATTGGATAAGTATTAATTATTTTTATTTTGCATATGATTATTATAAAAACTTATTCCAAATGTAGTTACATTTTTAAGATAAAAACGAAAAATAGATTCCCAACTTACGTAATTAGGCTTTGATTTTTTAAAGTAATTTCTGTAATTTTGCAGTGGTTGTACACATTATGCAGCTATGTTATTATAAACTGATGTATTAAAATTTCCAGGTGCTGTGGAAATGCGCTGGGTTGATACATATTTCCCATTTACAAATCCATCATTTGAACTTGAGATTTTCTTTCAGGTACGTCAGATGATCGTTTAGTCAATTTGCTCTTCAGAACTCAATAATTTGATTATGGTACACTGCATTACTTCTTTTATGAATGACTTTCATTGCCGCCGATATATATATATATATATATATATATATATATATAAGTTTAAATATGTCAAGTTTAATTCCATTTACACAATGGCATTTCTGTTTTATCATATATGAACTTTAAATAGAACCTAGATGATAACCTTACAACTTTTTGACTTTGATAAGTTAGACGAGGGAACCAAGAAGTGAAAACGTGCTTGGGAGGGGACAGATGTTTTTCTGTATTTTTGGGTGTGTGTGGGTGGGGGGTTATTTTGGGATAAAGAAACTTTCATTATCCAAAAACAATACAAAGATGATAAGTTATCAGCCTGACATAGGCAAGAGGGTAACAAAAGGTTCCTCTAATTAGGATTGGCCACAACCATTTCTCAGCTATTATTTCCGCCCATGAATCCTATAAAAGAATGAATGGATGATATTTGAATTATGAGATTTCCTCGTCAAATTATTTACATTGCATTTGCTGTTAGTTCCTTCTTTGGATCTGTAGTTGTTTTCTCTCTTTCTGTTCAACAAAAAATATAATAAAAAGTAATCCTAAAATTTGAGGGCATTTGATGTCCTACCCACGCAGGAGAAATGGCTGGAAGTATTGGGATGCGGGGTGATGGAGCAAGAAATATTGAAAAGAAGTGATAAAGAAAATAATGTTGCATGGGCTTTTGGTCTCGGGTTGGAAAGGCTAGCTATGGTTCTTTTTGATATACCTGATATCCGATTATTTTGGTCAGCTGACGAGCGATTTACCACGCAGGTACCTAATTGCACCACTTAAACTATACTCTTTCATTTTTTCCACTCTGTTTTCTCTTTGAAAATAAATTATCCAATCATCACGTTGGGCTTTTTATTTGCAGTTCTCAAAGGGCAAGCTAGGTGTCAAGTTTAAATCGTTTTCTAAGGTACTTTTACCAAACATTTTAGGCATGAAGGGATAACAATCTTCCGTTTCCTGAGAGAGCATATAATTCTATTTCTTTTAGTAACATCGAACTAGTTTCAATATGCTTTCTAACAAATTACATCTTCTAAATTATTTTAAAAAACTTTAGTAATTCAATCTGCTGCAGTTTCCACCTTGCTACAAGGACATCAGTTTTTGGATCAATGATTCCTTCACCGAGAATAATTTATGTGAAGTTGTTAGAGGAGTTGCCGGCGACCTTGTTGAAGAGGTATTTTATTAACTGTTTTCAGCGCATATATAATTCTTAAGATAATTTTAATGAAATGCTTAAGGTAGGGGCATGAGAACCTTTTTCTTCTCGAAATACATGCTTGAGAAAATCTGCTATCTGAAGTTCAATTTTTTAAAAGATAAAGTTGGTTGTGTAAATCTGAAAACGTTCTTTCAATCATGGATACTCTTTCAATTAACCTGGTCTGTTAGTTTCCGGAAAGTTGCACCTCGTTTAATGAAGTCATTTTAATTTTTTACAAATGGATGCTGGCAGGTACAACTGATAGACAGTTTTACCAACAAGAAGAAAGGGATGACGAGTCACTGTTACAGGATTGCTTACCGATCTATGGAACGGTCACTCACAGATGAAGAAATCAATGATTTGCAGGTATTTATCAACTTTAAGTTATATCCCTATTATATATTAACTTGTTTGAAAAAGAAGTTTGGATACAGCCTTCATATATTTTGTGGTTGCAAATGCAGTGGAACGTGAGAGAACAGGTTCAGAGCAAGTTGAACGTTGTCTTGCGATGAACATTGGAAGTGCAACAATATCAGTCCAAGCCATGTAATGTTATTTTTTACCTTCTCTACAGATTGAATTTTACTCTGTACACCATTTGAATTTTGCCTACAAAATTCTTCTAACTGGGTGATAGGAAGTGTAGAGTATATAACGTAACCAGTTGAAACCCTGAAAATAATCATCAAGAATTCAAGTGGAGATGTGCTGCAACTAATTTTTTAACATATACTATGAGTTTCTTTCCCCTACCTCATGTTTTAACATGACTTTGCTGATTTTTGGACCTGTTGAACTTATGCTATCAAGAAACTCCATTTACCATTGGACCACTTTTGCCTAGATTAGAAAGGGAGACCTCACTTTGTCTGAAATATATGACAAAGGAATAAGAATGTGTGCTTTGAAGTAAGTTGTGCCTATTTTCTTGACATCCGAACAAATAGAAGCTGAGGGAAGGTACTTTTCCTGAATAGTTGAGCCAATTTTGATATTTCTTTAGAAACTGACGAAGCCTGCAGGTTAAAATGCTGTACTTAGAAAATGTGCAAACCTTTAACAACACATAAAATAACCAAACTTGAACTAGAGCAAGATAATCTAGTGGTCAAAATGATGTCACGATAGACATCAACCCAAAGAAATAAAAGAACGAATATCATTTTCCAACACCCCTTCCAACTACCGATTTACCTTGCAATTCTAGTAAATATGATAAAGACCTCTTATGATATGAGATTCCCAAATCAAAACTGCATGAAAAGCAATTCACACACACTTTAAATAACAAAATATTTAATTTTATAGCACAATCAATTAAGAAGGGTTAAGTATTTGCCTGATTAAGTCATATAATGTCTTTAAAAGTTCGATCTCCCGACTCTAGGAGCTCAAAAGTACAGAGATATTGGATTTCACAGTTCCATTCACATGCATTTTAAATTTTATTCTTATATAAACTCTGTAGGCAAATGCCTCTTTTTAATTTTAAGGAGTATTTAGT

mRNA sequence

ATGCAACTCCACCAAAGAGATAACCATCCACTTGGCATTCTGAAGAATGAGATATACAACTATTTTGATACAAATTACTCAAATAAGTTCACTAAGTTTGATGACCTCAGTCCAATCGTTTCTGTGAAGGAGAATTTTGATGATGTGTTGGTTCCAGAAGATCATGTAAGCCGAAGTTATAATGATACATACTACATTGACTCGCAAACTGTTCTGAGATGTCATACAAGTGCTCACCAAGCGGAGCTGTTGAGAAGAGGCTATACTCAGTTTCTTGTGACAGGCGATGTTTATCGTCGGGATTCCATTGATTCAACTCATTACCCTGTATTTCATCAGATGGAAGGTGTCCGTGTTTTTTCTCTGAATGATTGGGAGGCATCTGGTACAGATGGAACATCTTTTGCAGCTGACGACTTGAAGAAATGTTTGGAAGGTTTGGCAAGGCATTTATTTGGTGCTGTGGAAATGCGCTGGGTTGATACATATTTCCCATTTACAAATCCATCATTTGAACTTGAGATTTTCTTTCAGGAGAAATGGCTGGAAGTATTGGGATGCGGGGTGATGGAGCAAGAAATATTGAAAAGAAGTGATAAAGAAAATAATGTTGCATGGGCTTTTGGTCTCGGGTTGGAAAGGCTAGCTATGGTTCTTTTTGATATACCTGATATCCGATTATTTTGGTCAGCTGACGAGCGATTTACCACGCAGTTCTCAAAGGGCAAGCTAGGTGTCAAGTTTAAATCGTTTTCTAAGTTTCCACCTTGCTACAAGGACATCAGTTTTTGGATCAATGATTCCTTCACCGAGAATAATTTATGTGAAGTTGTTAGAGGAGTTGCCGGCGACCTTGTTGAAGAGGTACAACTGATAGACAGTTTTACCAACAAGAAGAAAGGGATGACGAGTCACTGTTACAGGATTGCTTACCGATCTATGGAACGGTCACTCACAGATGAAGAAATCAATGATTTGCAGTGGAACGTGAGAGAACAGGTTCAGAGCAAGTTGAACGTTGTCTTGCGATGAACATTGGAAGTGCAACAATATCAGTCCAAGCCATGTAATGTTATTTTTTACCTTCTCTACAGATTGAATTTTACTCTGTACACCATTTGAATTTTGCCTACAAAATTCTTCTAACTGGGTGATAGGAAGTGTAGAGTATATAACGTAACCAGTTGAAACCCTGAAAATAATCATCAAGAATTCAAGTGGAGATGTGCTGCAACTAATTTTTTAACATATACTATGAGTTTCTTTCCCCTACCTCATGTTTTAACATGACTTTGCTGATTTTTGGACCTGTTGAACTTATGCTATCAAGAAACTCCATTTACCATTGGACCACTTTTGCCTAGATTAGAAAGGGAGACCTCACTTTGTCTGAAATATATGACAAAGGAATAAGAATGTGTGCTTTGAAGTAAGTTGTGCCTATTTTCTTGACATCCGAACAAATAGAAGCTGAGGGAAGGTACTTTTCCTGAATAGTTGAGCCAATTTTGATATTTCTTTAGAAACTGACGAAGCCTGCAGGTTAAAATGCTGTACTTAGAAAATGTGCAAACCTTTAACAACACATAAAATAACCAAACTTGAACTAGAGCAAGATAATCTAGTGGTCAAAATGATGTCACGATAGACATCAACCCAAAGAAATAAAAGAACGAATATCATTTTCCAACACCCCTTCCAACTACCGATTTACCTTGCAATTCTAGTAAATATGATAAAGACCTCTTATGATATGAGATTCCCAAATCAAAACTGCATGAAAAGCAATTCACACACACTTTAAATAACAAAATATTTAATTTTATAGCACAATCAATTAAGAAGGGTTAAGTATTTGCCTGATTAAGTCATATAATGTCTTTAAAAGTTCGATCTCCCGACTCTAGGAGCTCAAAAGTACAGAGATATTGGATTTCACAGTTCCATTCACATGCATTTTAAATTTTATTCTTATATAAACTCTGTAGGCAAATGCCTCTTTTTAATTTTAAGGAGTATTTAGT

Coding sequence (CDS)

ATGCAACTCCACCAAAGAGATAACCATCCACTTGGCATTCTGAAGAATGAGATATACAACTATTTTGATACAAATTACTCAAATAAGTTCACTAAGTTTGATGACCTCAGTCCAATCGTTTCTGTGAAGGAGAATTTTGATGATGTGTTGGTTCCAGAAGATCATGTAAGCCGAAGTTATAATGATACATACTACATTGACTCGCAAACTGTTCTGAGATGTCATACAAGTGCTCACCAAGCGGAGCTGTTGAGAAGAGGCTATACTCAGTTTCTTGTGACAGGCGATGTTTATCGTCGGGATTCCATTGATTCAACTCATTACCCTGTATTTCATCAGATGGAAGGTGTCCGTGTTTTTTCTCTGAATGATTGGGAGGCATCTGGTACAGATGGAACATCTTTTGCAGCTGACGACTTGAAGAAATGTTTGGAAGGTTTGGCAAGGCATTTATTTGGTGCTGTGGAAATGCGCTGGGTTGATACATATTTCCCATTTACAAATCCATCATTTGAACTTGAGATTTTCTTTCAGGAGAAATGGCTGGAAGTATTGGGATGCGGGGTGATGGAGCAAGAAATATTGAAAAGAAGTGATAAAGAAAATAATGTTGCATGGGCTTTTGGTCTCGGGTTGGAAAGGCTAGCTATGGTTCTTTTTGATATACCTGATATCCGATTATTTTGGTCAGCTGACGAGCGATTTACCACGCAGTTCTCAAAGGGCAAGCTAGGTGTCAAGTTTAAATCGTTTTCTAAGTTTCCACCTTGCTACAAGGACATCAGTTTTTGGATCAATGATTCCTTCACCGAGAATAATTTATGTGAAGTTGTTAGAGGAGTTGCCGGCGACCTTGTTGAAGAGGTACAACTGATAGACAGTTTTACCAACAAGAAGAAAGGGATGACGAGTCACTGTTACAGGATTGCTTACCGATCTATGGAACGGTCACTCACAGATGAAGAAATCAATGATTTGCAGTGGAACGTGAGAGAACAGGTTCAGAGCAAGTTGAACGTTGTCTTGCGATGA

Homology

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BLAST of CmoCh03G014890 vs. Swiss-Prot
Match: SYFM_ARATH (Phenylalanine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At3g58140 PE=1 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 3.0e-171
Identity = 281/343 (81.92%), Postives = 312/343 (90.96%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RD HP+GILKN IY+YFD+NYSNKF KF+DLSPIV+ K+NFDDVLVP DHVSRS 
Sbjct: 87  MQLHRRDKHPIGILKNAIYDYFDSNYSNKFEKFEDLSPIVTTKQNFDDVLVPADHVSRSL 146

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYY+DSQTVLRCHTSAHQAELLR+G+++FLVTGDVYRRDSIDSTHYPVFHQMEG  VF
Sbjct: 147 NDTYYVDSQTVLRCHTSAHQAELLRKGHSRFLVTGDVYRRDSIDSTHYPVFHQMEGFCVF 206

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           S  DW  SG D T +AA+DLKKCLEGLARHLFG+VEMRWVDTYFPFTNPSFELEI+F+E 
Sbjct: 207 SPEDWNGSGKDSTLYAAEDLKKCLEGLARHLFGSVEMRWVDTYFPFTNPSFELEIYFKED 266

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQ ILK+S  ENNVAWAFGLGLERLAMVLFDIPDIR FWS+DERFT+QF 
Sbjct: 267 WLEVLGCGVTEQVILKQSGLENNVAWAFGLGLERLAMVLFDIPDIRFFWSSDERFTSQFG 326

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KG+LGVKFK +SK+PPCYKDISFWI+D FTENN CEVVRG+AGDLVEEV+LID FTNKKK
Sbjct: 327 KGELGVKFKPYSKYPPCYKDISFWISDLFTENNFCEVVRGIAGDLVEEVKLIDQFTNKKK 386

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           G+TSHCYRI +RSMERSLTDEE+NDLQ  VR++VQ KLNV LR
Sbjct: 387 GLTSHCYRIVFRSMERSLTDEEVNDLQSKVRDEVQKKLNVELR 429

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BLAST of CmoCh03G014890 vs. Swiss-Prot
Match: SYFM_DICDI (Phenylalanine--tRNA ligase, mitochondrial OS=Dictyostelium discoideum GN=mpheS PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-100
Identity = 193/391 (49.36%), Postives = 246/391 (62.92%), Query Frame = 1


Query: 3   LHQRDNHPLGILKNEIYNYFDTNYSN---KFTKFDDLSPIVSVKENFDDVLVPEDHVSRS 62
           LH + +HPL I+K +I  +F    S+   KF  FD   P VSVKENFD++L P DHV RS
Sbjct: 64  LHCKRDHPLNIIKKKIQYHFQNKLSDEEHKFQFFDSFEPKVSVKENFDELLFPVDHVGRS 123

Query: 63  YNDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVR- 122
            NDTYY     +LR HTSAHQ++LLR     FLVTGDVYRRD+ID+ HYPVFHQMEGV+ 
Sbjct: 124 PNDTYYFSKDQLLRTHTSAHQSQLLREQEKAFLVTGDVYRRDTIDAVHYPVFHQMEGVKV 183

Query: 123 -----------------VFSLNDWEASGTDGTSFAADDLKKCLEGLARHLFGA-VEMRWV 182
                            +    D              DLK+ LE + R + G  +++RW+
Sbjct: 184 FKDKVNLAIDGKPFDETIDYYEDNNYKQLQSVKDVEKDLKQSLESMIRSVIGQDLQVRWI 243

Query: 183 DTYFPFTNPSFELEIFFQEKWLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLF 242
           D YFPFT+PSFE+EI+FQ +WLEVLGCGV+   I+      N+ AWAFG+GLERLAM+LF
Sbjct: 244 DAYFPFTSPSFEMEIYFQGQWLEVLGCGVVHPSIMNNCGLSNDRAWAFGIGLERLAMILF 303

Query: 243 DIPDIRLFWSADERFTTQF--------------------SKGKL------GVKFKSFSKF 302
           +IPDIRLFW+ D RF  QF                    S   L      GV+F+ FSK+
Sbjct: 304 NIPDIRLFWTEDNRFHNQFKGVDKSISTSSSSSSSSSSSSSSTLSDIDIKGVQFQQFSKY 363

Query: 303 PPCYKDISFWIND--SFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKKGMTSHCYRIAYR 344
           P C+KD+SFW+ D  +F EN   E VR   GDLVE V L+D+FTNKK   TSHCYRI YR
Sbjct: 364 PSCFKDVSFWLEDEENFHENKFYEFVRESCGDLVERVDLVDNFTNKKLNKTSHCYRIYYR 423

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BLAST of CmoCh03G014890 vs. Swiss-Prot
Match: SYFM_MOUSE (Phenylalanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Fars2 PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.7e-95
Identity = 180/370 (48.65%), Postives = 235/370 (63.51%), Query Frame = 1


Query: 3   LHQRDNHPLGILKNEIYNYFDTNYSNK-----FTKFDDLSPIVSVKENFDDVLVPEDHVS 62
           LH +  HPL ++K  +  +F   Y  +     F+ +D L P+V+  +NFD +L+P DH S
Sbjct: 78  LHNQKFHPLWLIKERVKEHFYQQYMVRSRTPLFSVYDQLPPVVTTWQNFDSLLIPADHPS 137

Query: 63  RSYNDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGV 122
           R   D YY++   +LR HTSAHQ +LL  G   FLV GDVYRRD ID  HYPVFHQ+EGV
Sbjct: 138 RKKGDNYYLNRAHMLRAHTSAHQWDLLHAGLNAFLVVGDVYRRDQIDCQHYPVFHQLEGV 197

Query: 123 RVFSLNDWEASGTDGTS-----------------------FAADDLKKCLEGLARHLFG- 182
           R+FS ++  A   DG S                           DLK+ L  L  HLFG 
Sbjct: 198 RLFSKHELFAGVKDGESLQLFEEGSRSAHKQETHTMEAVKLVEFDLKQVLTRLVTHLFGD 257

Query: 183 AVEMRWVDTYFPFTNPSFELEIFFQEKWLEVLGCGVMEQEILKRSDKENNVAWAFGLGLE 242
            +E+RWVD YFPFT+PSFE+EI F+ +WLEVLGCGVMEQ+++  +  ++ + WAFGLGLE
Sbjct: 258 GLEVRWVDCYFPFTHPSFEMEINFRGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLE 317

Query: 243 RLAMVLFDIPDIRLFWSADERFTTQF--SKGKLGVKFKSFSKFPPCYKDISFWI-NDSFT 302
           RLAMVL+DIPDIRLFWS DERF  QF  S     VKF+  SK+P  + DISFW+ ++++T
Sbjct: 318 RLAMVLYDIPDIRLFWSEDERFLKQFLLSDINQSVKFQPLSKYPAVFNDISFWLPSENYT 377

Query: 303 ENNLCEVVRGVAGDLVEEVQLIDSFTNKKKGMTSHCYRIAYRSMERSLTDEEINDLQWNV 341
           EN+  ++VR V GDLVE+V LID F + K   TSHCYRI YR MER+L+  E+ ++   V
Sbjct: 378 ENDFYDIVRTVGGDLVEKVDLIDKFEHPKTHRTSHCYRITYRHMERTLSQREVGNVHQAV 437

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BLAST of CmoCh03G014890 vs. Swiss-Prot
Match: SYFM_HUMAN (Phenylalanine--tRNA ligase, mitochondrial OS=Homo sapiens GN=FARS2 PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 8.7e-94
Identity = 174/370 (47.03%), Postives = 233/370 (62.97%), Query Frame = 1


Query: 3   LHQRDNHPLGILKNEIYNYFDTNYSNKF-----TKFDDLSPIVSVKENFDDVLVPEDHVS 62
           LH + +HPL ++K  +  +F   Y  +F     + +D+LSP+V+  +NFD +L+P DH S
Sbjct: 78  LHNQQHHPLWLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPS 137

Query: 63  RSYNDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGV 122
           R   D YY++   +LR HTSAHQ +LL  G   FLV GDVYRRD IDS HYP+FHQ+E V
Sbjct: 138 RKKGDNYYLNRTHMLRAHTSAHQWDLLHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAV 197

Query: 123 RVFSLNDWEASGTDGTS-----------------------FAADDLKKCLEGLARHLFG- 182
           R+FS ++  A   DG S                           DLK+ L  L  HLFG 
Sbjct: 198 RLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGD 257

Query: 183 AVEMRWVDTYFPFTNPSFELEIFFQEKWLEVLGCGVMEQEILKRSDKENNVAWAFGLGLE 242
            +E+RWVD YFPFT+PSFE+EI F  +WLEVLGCGVMEQ+++  +  ++ + WAFGLGLE
Sbjct: 258 ELEIRWVDCYFPFTHPSFEMEINFHGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLE 317

Query: 243 RLAMVLFDIPDIRLFWSADERFTTQFSKGKLG--VKFKSFSKFPPCYKDISFWI-NDSFT 302
           RLAM+L+DIPDIRLFW  DERF  QF    +   VKF+  SK+P    DISFW+ ++++ 
Sbjct: 318 RLAMILYDIPDIRLFWCEDERFLKQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYA 377

Query: 303 ENNLCEVVRGVAGDLVEEVQLIDSFTNKKKGMTSHCYRIAYRSMERSLTDEEINDLQWNV 341
           EN+  ++VR + GDLVE+V LID F + K   TSHCYRI YR MER+L+  E+  +   +
Sbjct: 378 ENDFYDLVRTIGGDLVEKVDLIDKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQAL 437

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BLAST of CmoCh03G014890 vs. Swiss-Prot
Match: SYFM_RAT (Phenylalanine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Fars2 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.3e-93
Identity = 178/391 (45.52%), Postives = 235/391 (60.10%), Query Frame = 1


Query: 3   LHQRDNHPLGILKNEIYNYFDTNYSNK-----FTKFDDLSPIVSVKENFDDVLVPEDHVS 62
           LH +  HPL ++K  +  +F   Y  +     F+ +D LSP+V+  +NFD +L+P DH S
Sbjct: 78  LHNQKFHPLWLIKERVKEHFYQQYMGRSRTPLFSVYDQLSPVVTTWQNFDSLLIPADHPS 137

Query: 63  RSYNDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGV 122
           R   D YY++   +LR HTSAHQ +LL  G   FLV GDVYRRD IDS HYPVFHQ+EGV
Sbjct: 138 RKKGDNYYLNRGHMLRAHTSAHQWDLLHAGLNAFLVVGDVYRRDQIDSQHYPVFHQLEGV 197

Query: 123 RVF-----------------------SLNDWEASGTDGTSFAADDLKKCLEGLARHLFG- 182
           R+F                       S +  E    +       DLK+ L  L  HLFG 
Sbjct: 198 RLFSKHELFAGVKDGESLQLFEESSRSAHKQETHTMEAVKLVEFDLKQVLTRLVTHLFGD 257

Query: 183 AVEMRWVDTYFPFTNPSFELEIFFQEKWLEVLGCGVMEQEILKRSDKENNVAWAFGLGLE 242
            +E+RWVD YFPFT+PSFE+EI F+ +WLEVLGCGVMEQ+++  +  ++ + WAFGLGLE
Sbjct: 258 GLEVRWVDCYFPFTHPSFEMEINFRGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLE 317

Query: 243 RLAMVLFDIPDIRLFWSADERFTTQFS-----------------------KGKLGVKFKS 302
           RLAMVL+DIPDIRLFWS DERF  QF                        + K+G +   
Sbjct: 318 RLAMVLYDIPDIRLFWSEDERFLKQFRLSDINQSVKFQRWFFQEERATGIQRKMGRQLCP 377

Query: 303 FSKFPPCYKDISFWI-NDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKKGMTSHCYRI 341
           FSK+P  + DISFW+ ++++TEN+  ++VR V GDLVE+V LID F + K   TSHCYRI
Sbjct: 378 FSKYPAVFNDISFWLPSENYTENDFYDIVRTVGGDLVEKVDLIDKFEHPKTHRTSHCYRI 437

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BLAST of CmoCh03G014890 vs. TrEMBL
Match: E5GCL5_CUCME (Phenylalanyl-tRNA synthetase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 5.0e-189
Identity = 321/343 (93.59%), Postives = 332/343 (96.79%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RDNHPLGILKNEIYNYFDTNYSNKF KFDDLSPIVSVKENFDDVLVPEDHVSRSY
Sbjct: 89  MQLHRRDNHPLGILKNEIYNYFDTNYSNKFIKFDDLSPIVSVKENFDDVLVPEDHVSRSY 148

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQME VRVF
Sbjct: 149 NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEAVRVF 208

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           SLND E SGTDGTS+AADDLKKCLEGLARHLFGAVEMRWVD YFPFT+PSFELEIFFQEK
Sbjct: 209 SLNDLEVSGTDGTSYAADDLKKCLEGLARHLFGAVEMRWVDAYFPFTDPSFELEIFFQEK 268

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGVMEQ+ILK+  KEN+VAWAFGLGLERLAMVLF IPD+RLFWSADERFT+QFS
Sbjct: 269 WLEVLGCGVMEQKILKKCGKENHVAWAFGLGLERLAMVLFGIPDVRLFWSADERFTSQFS 328

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KGKLGVKFK FSKFPPCYKDISFWIN+SFTENNLCEVVRG+AGDLVEEVQLIDSFTN+KK
Sbjct: 329 KGKLGVKFKPFSKFPPCYKDISFWINESFTENNLCEVVRGIAGDLVEEVQLIDSFTNEKK 388

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           GMTSHCYRIAYRSMERSLTDEEINDLQ NVREQVQSKL VVLR
Sbjct: 389 GMTSHCYRIAYRSMERSLTDEEINDLQRNVREQVQSKLKVVLR 431

[Close]

BLAST of CmoCh03G014890 vs. TrEMBL
Match: A0A0A0KJ29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G526470 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 3.2e-188
Identity = 319/343 (93.00%), Postives = 332/343 (96.79%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RDNHPLGILKNEIYNYFDTNYSNKF KFDDLSPIVSVKENFDDVLVPEDHVSRSY
Sbjct: 89  MQLHRRDNHPLGILKNEIYNYFDTNYSNKFIKFDDLSPIVSVKENFDDVLVPEDHVSRSY 148

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQME VRVF
Sbjct: 149 NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEAVRVF 208

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           SL+D E SGTDGTS+AADDLKKCLEGLARHLFGAVEMRWVD YFPFT+PSFELEIFFQEK
Sbjct: 209 SLDDLEVSGTDGTSYAADDLKKCLEGLARHLFGAVEMRWVDAYFPFTDPSFELEIFFQEK 268

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGVMEQ+ILK+  KEN+V+WAFGLGLERLAMVLF IPD+RLFWSADERFT+QFS
Sbjct: 269 WLEVLGCGVMEQKILKKCGKENHVSWAFGLGLERLAMVLFGIPDVRLFWSADERFTSQFS 328

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KGKLGVKFK FSKFPPCYKDISFWIN+SFTENNLCEVVRG+AGDLVEEVQLIDSFTN+KK
Sbjct: 329 KGKLGVKFKPFSKFPPCYKDISFWINESFTENNLCEVVRGIAGDLVEEVQLIDSFTNEKK 388

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           G TSHCYRIAYRSMERSLTDEEINDLQ NVREQVQSKLNVVLR
Sbjct: 389 GTTSHCYRIAYRSMERSLTDEEINDLQTNVREQVQSKLNVVLR 431

[Close]

BLAST of CmoCh03G014890 vs. TrEMBL
Match: B9MWE6_POPTR (Phenylalanyl-tRNA synthetase class IIc family protein OS=Populus trichocarpa GN=POPTR_0013s10990g PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 1.6e-179
Identity = 303/343 (88.34%), Postives = 325/343 (94.75%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           +QLH+RD HPLGILKN IY+YFDTNYSNKF KFD+L PIVSVK+NFDDVLVP DHVSRSY
Sbjct: 85  LQLHRRDQHPLGILKNTIYDYFDTNYSNKFDKFDELCPIVSVKQNFDDVLVPADHVSRSY 144

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYY+DSQTVLRCHTSAHQAELLR+G+T FLVTGDVYRRDSIDSTHYPVFHQMEG RVF
Sbjct: 145 NDTYYVDSQTVLRCHTSAHQAELLRKGHTHFLVTGDVYRRDSIDSTHYPVFHQMEGFRVF 204

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           S ++WEASG DGTSFAA+DLKKCLEGLA HLFGAVEMRWVDTYFPFTNPSFELEI+FQEK
Sbjct: 205 SPDEWEASGVDGTSFAAEDLKKCLEGLATHLFGAVEMRWVDTYFPFTNPSFELEIYFQEK 264

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQEILKR+ K NNVAWAFGLGLERLAMVLFDIPDIRLFWS DERFT+QFS
Sbjct: 265 WLEVLGCGVTEQEILKRNGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSNDERFTSQFS 324

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KG+LG+KFK FSK+PPCYKD+SFWIN+SFTENNLCEVVRG+AGDLVEEV LID+FTN KK
Sbjct: 325 KGQLGIKFKPFSKYPPCYKDMSFWINESFTENNLCEVVRGIAGDLVEEVSLIDNFTN-KK 384

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           GMTSHCYRIAYRSMERSLTDEEINDLQ +VREQVQSKLNVVLR
Sbjct: 385 GMTSHCYRIAYRSMERSLTDEEINDLQMSVREQVQSKLNVVLR 426

[Close]

BLAST of CmoCh03G014890 vs. TrEMBL
Match: M5WGS0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006022mg PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 3.6e-179
Identity = 303/343 (88.34%), Postives = 322/343 (93.88%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RD HP+GILKN IY YFDTNYSN+F KFD+L PIVSVKENFDDVLVP DHVSRSY
Sbjct: 91  MQLHRRDQHPIGILKNAIYEYFDTNYSNQFDKFDNLCPIVSVKENFDDVLVPADHVSRSY 150

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYY+D+QTVLRCHTSAHQAELLRRG+T FLVTGDVYRRDSIDSTHYPVFHQMEGVRVF
Sbjct: 151 NDTYYVDAQTVLRCHTSAHQAELLRRGHTHFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 210

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           S +DWEASGTDGT++ A DLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK
Sbjct: 211 SPSDWEASGTDGTTYVAGDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 270

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQEIL+RS K +NVAWAFGLGLERLAMVLFDIPDIRLFWS DERFT+QFS
Sbjct: 271 WLEVLGCGVTEQEILRRSGKTDNVAWAFGLGLERLAMVLFDIPDIRLFWSNDERFTSQFS 330

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
            G+LGVKFK FSK+PPCYKD+SFWIN++FTENNLCEVVR VAGDL EEVQLID+FTN KK
Sbjct: 331 SGQLGVKFKPFSKYPPCYKDVSFWINEAFTENNLCEVVREVAGDLAEEVQLIDNFTN-KK 390

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           GMTSHCYRIAYRSMERSLTDEEIN LQWNVRE VQSKLNVVLR
Sbjct: 391 GMTSHCYRIAYRSMERSLTDEEINKLQWNVRELVQSKLNVVLR 432

[Close]

BLAST of CmoCh03G014890 vs. TrEMBL
Match: A0A151TD69_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019602 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 5.2e-178
Identity = 301/343 (87.76%), Postives = 319/343 (93.00%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RD HPLGILKN IY YFDTNYSN F KFDDL PIVSVK+NFDDVLVP+DHVSRSY
Sbjct: 88  MQLHRRDQHPLGILKNAIYEYFDTNYSNNFNKFDDLCPIVSVKQNFDDVLVPKDHVSRSY 147

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYYID QTVLRCHTSAHQAELLR GYT FLVTGDVYRRDSIDSTHYPVFHQMEG RVF
Sbjct: 148 NDTYYIDPQTVLRCHTSAHQAELLRSGYTHFLVTGDVYRRDSIDSTHYPVFHQMEGFRVF 207

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           +  +WEASG D T ++A DLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEI+F+EK
Sbjct: 208 APEEWEASGMDATLYSATDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIYFKEK 267

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQEILK + K NNVAWAFGLGLERLAMVLFDIPDIRLFWS DERFT+QFS
Sbjct: 268 WLEVLGCGVTEQEILKSNGKTNNVAWAFGLGLERLAMVLFDIPDIRLFWSNDERFTSQFS 327

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KG+LGVKFK FSK+PPCYKD+SFWIN+SFTENNLCEVVRG+AGDLVEEVQLID+FTN KK
Sbjct: 328 KGQLGVKFKPFSKYPPCYKDMSFWINESFTENNLCEVVRGIAGDLVEEVQLIDNFTN-KK 387

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           G+TSHCYRIAYRSMERSLTDEEINDLQW VREQVQSKLNVVLR
Sbjct: 388 GITSHCYRIAYRSMERSLTDEEINDLQWKVREQVQSKLNVVLR 429

[Close]

BLAST of CmoCh03G014890 vs. TAIR10
Match: AT3G58140.1 (AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein)

HSP 1 Score: 602.4 bits (1552), Expect = 1.7e-172
Identity = 281/343 (81.92%), Postives = 312/343 (90.96%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RD HP+GILKN IY+YFD+NYSNKF KF+DLSPIV+ K+NFDDVLVP DHVSRS 
Sbjct: 87  MQLHRRDKHPIGILKNAIYDYFDSNYSNKFEKFEDLSPIVTTKQNFDDVLVPADHVSRSL 146

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYY+DSQTVLRCHTSAHQAELLR+G+++FLVTGDVYRRDSIDSTHYPVFHQMEG  VF
Sbjct: 147 NDTYYVDSQTVLRCHTSAHQAELLRKGHSRFLVTGDVYRRDSIDSTHYPVFHQMEGFCVF 206

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           S  DW  SG D T +AA+DLKKCLEGLARHLFG+VEMRWVDTYFPFTNPSFELEI+F+E 
Sbjct: 207 SPEDWNGSGKDSTLYAAEDLKKCLEGLARHLFGSVEMRWVDTYFPFTNPSFELEIYFKED 266

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQ ILK+S  ENNVAWAFGLGLERLAMVLFDIPDIR FWS+DERFT+QF 
Sbjct: 267 WLEVLGCGVTEQVILKQSGLENNVAWAFGLGLERLAMVLFDIPDIRFFWSSDERFTSQFG 326

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KG+LGVKFK +SK+PPCYKDISFWI+D FTENN CEVVRG+AGDLVEEV+LID FTNKKK
Sbjct: 327 KGELGVKFKPYSKYPPCYKDISFWISDLFTENNFCEVVRGIAGDLVEEVKLIDQFTNKKK 386

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           G+TSHCYRI +RSMERSLTDEE+NDLQ  VR++VQ KLNV LR
Sbjct: 387 GLTSHCYRIVFRSMERSLTDEEVNDLQSKVRDEVQKKLNVELR 429

[Close]

BLAST of CmoCh03G014890 vs. TAIR10
Match: AT4G39280.1 (AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative)

HSP 1 Score: 65.5 bits (158), Expect = 7.5e-11
Identity = 55/200 (27.50%), Postives = 92/200 (46.00%), Query Frame = 1


Query: 51  VPEDHV-------------SRSYNDTYYID--SQTVLRCHTSAHQAELL----RRGYT-- 110
           +PED+V             SR YN  +  +  ++ +LR HT+A  + +L    ++ +   
Sbjct: 277 LPEDYVERVKRVHESGGYGSRGYNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPK 336

Query: 111 QFLVTGDVYRRDSIDSTHYPVFHQMEGVRVFSLNDWEASGTDGTSFAADDLKKCLEGLAR 170
           ++     V+R +++D TH   FHQ+EG+                     DL   LE    
Sbjct: 337 KYFSIDRVFRNEAVDRTHLAEFHQIEGL------------ICDRGLTLGDLIGVLEDFFS 396

Query: 171 HLFGAVEMRWVDTYFPFTNPSFELEIFFQ--EKWLEVLGCGVMEQEILKRSDKENNV-AW 227
            L G  ++R+   Y P+T PS E+  + +   KW+E+   G+   E+L       +V   
Sbjct: 397 RL-GMSKLRFKPAYNPYTEPSMEIFSYHEGLGKWVEIGNSGMFRPEMLLPMGLPEDVRVI 456

[Close]

BLAST of CmoCh03G014890 vs. NCBI nr
Match: gi|659077965|ref|XP_008439478.1| (PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 668.3 bits (1723), Expect = 7.1e-189
Identity = 321/343 (93.59%), Postives = 332/343 (96.79%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RDNHPLGILKNEIYNYFDTNYSNKF KFDDLSPIVSVKENFDDVLVPEDHVSRSY
Sbjct: 89  MQLHRRDNHPLGILKNEIYNYFDTNYSNKFIKFDDLSPIVSVKENFDDVLVPEDHVSRSY 148

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQME VRVF
Sbjct: 149 NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEAVRVF 208

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           SLND E SGTDGTS+AADDLKKCLEGLARHLFGAVEMRWVD YFPFT+PSFELEIFFQEK
Sbjct: 209 SLNDLEVSGTDGTSYAADDLKKCLEGLARHLFGAVEMRWVDAYFPFTDPSFELEIFFQEK 268

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGVMEQ+ILK+  KEN+VAWAFGLGLERLAMVLF IPD+RLFWSADERFT+QFS
Sbjct: 269 WLEVLGCGVMEQKILKKCGKENHVAWAFGLGLERLAMVLFGIPDVRLFWSADERFTSQFS 328

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KGKLGVKFK FSKFPPCYKDISFWIN+SFTENNLCEVVRG+AGDLVEEVQLIDSFTN+KK
Sbjct: 329 KGKLGVKFKPFSKFPPCYKDISFWINESFTENNLCEVVRGIAGDLVEEVQLIDSFTNEKK 388

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           GMTSHCYRIAYRSMERSLTDEEINDLQ NVREQVQSKL VVLR
Sbjct: 389 GMTSHCYRIAYRSMERSLTDEEINDLQRNVREQVQSKLKVVLR 431

[Close]

BLAST of CmoCh03G014890 vs. NCBI nr
Match: gi|449433501|ref|XP_004134536.1| (PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 665.6 bits (1716), Expect = 4.6e-188
Identity = 319/343 (93.00%), Postives = 332/343 (96.79%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RDNHPLGILKNEIYNYFDTNYSNKF KFDDLSPIVSVKENFDDVLVPEDHVSRSY
Sbjct: 89  MQLHRRDNHPLGILKNEIYNYFDTNYSNKFIKFDDLSPIVSVKENFDDVLVPEDHVSRSY 148

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQME VRVF
Sbjct: 149 NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEAVRVF 208

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           SL+D E SGTDGTS+AADDLKKCLEGLARHLFGAVEMRWVD YFPFT+PSFELEIFFQEK
Sbjct: 209 SLDDLEVSGTDGTSYAADDLKKCLEGLARHLFGAVEMRWVDAYFPFTDPSFELEIFFQEK 268

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGVMEQ+ILK+  KEN+V+WAFGLGLERLAMVLF IPD+RLFWSADERFT+QFS
Sbjct: 269 WLEVLGCGVMEQKILKKCGKENHVSWAFGLGLERLAMVLFGIPDVRLFWSADERFTSQFS 328

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KGKLGVKFK FSKFPPCYKDISFWIN+SFTENNLCEVVRG+AGDLVEEVQLIDSFTN+KK
Sbjct: 329 KGKLGVKFKPFSKFPPCYKDISFWINESFTENNLCEVVRGIAGDLVEEVQLIDSFTNEKK 388

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           G TSHCYRIAYRSMERSLTDEEINDLQ NVREQVQSKLNVVLR
Sbjct: 389 GTTSHCYRIAYRSMERSLTDEEINDLQTNVREQVQSKLNVVLR 431

[Close]

BLAST of CmoCh03G014890 vs. NCBI nr
Match: gi|657982497|ref|XP_008383288.1| (PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Malus domestica])

HSP 1 Score: 637.5 bits (1643), Expect = 1.3e-179
Identity = 304/343 (88.63%), Postives = 322/343 (93.88%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           +QLH+RD HPLGILKN IY YFDTNYSN+F KFD+L PIVSVKENFDDVLVP DHVSRSY
Sbjct: 90  LQLHRRDQHPLGILKNAIYEYFDTNYSNQFDKFDNLCPIVSVKENFDDVLVPADHVSRSY 149

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYYIDSQTVLRCHTSAHQAE+LRRG+T FLVTGDVYRRDSIDSTHYPVFHQMEGVRVF
Sbjct: 150 NDTYYIDSQTVLRCHTSAHQAEILRRGHTHFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 209

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           S  DWEASGTDGTS+AA DLKKCLEGLARHLFG+VEMRWVDTYFPFTNPSFELEIFFQEK
Sbjct: 210 SPQDWEASGTDGTSYAAGDLKKCLEGLARHLFGSVEMRWVDTYFPFTNPSFELEIFFQEK 269

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQEIL+RS K +NVAWAFGLGLERLAMVLFDIPDIRLFWS DERFT+QFS
Sbjct: 270 WLEVLGCGVTEQEILRRSGKTDNVAWAFGLGLERLAMVLFDIPDIRLFWSTDERFTSQFS 329

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
            G+LG+KFK FSK+PPCYKD+SFWIN+SFTENNLCEVVR VAGDL EEVQLID+FTN KK
Sbjct: 330 SGQLGIKFKPFSKYPPCYKDVSFWINESFTENNLCEVVREVAGDLAEEVQLIDNFTN-KK 389

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           GMTSHCYRIAYRSMERSLTD+EIN LQWNVRE VQSKLNVVLR
Sbjct: 390 GMTSHCYRIAYRSMERSLTDDEINKLQWNVRELVQSKLNVVLR 431

[Close]

BLAST of CmoCh03G014890 vs. NCBI nr
Match: gi|566200587|ref|XP_006376212.1| (phenylalanyl-tRNA synthetase class IIc family protein [Populus trichocarpa])

HSP 1 Score: 636.7 bits (1641), Expect = 2.3e-179
Identity = 303/343 (88.34%), Postives = 325/343 (94.75%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           +QLH+RD HPLGILKN IY+YFDTNYSNKF KFD+L PIVSVK+NFDDVLVP DHVSRSY
Sbjct: 85  LQLHRRDQHPLGILKNTIYDYFDTNYSNKFDKFDELCPIVSVKQNFDDVLVPADHVSRSY 144

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYY+DSQTVLRCHTSAHQAELLR+G+T FLVTGDVYRRDSIDSTHYPVFHQMEG RVF
Sbjct: 145 NDTYYVDSQTVLRCHTSAHQAELLRKGHTHFLVTGDVYRRDSIDSTHYPVFHQMEGFRVF 204

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           S ++WEASG DGTSFAA+DLKKCLEGLA HLFGAVEMRWVDTYFPFTNPSFELEI+FQEK
Sbjct: 205 SPDEWEASGVDGTSFAAEDLKKCLEGLATHLFGAVEMRWVDTYFPFTNPSFELEIYFQEK 264

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQEILKR+ K NNVAWAFGLGLERLAMVLFDIPDIRLFWS DERFT+QFS
Sbjct: 265 WLEVLGCGVTEQEILKRNGKLNNVAWAFGLGLERLAMVLFDIPDIRLFWSNDERFTSQFS 324

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
           KG+LG+KFK FSK+PPCYKD+SFWIN+SFTENNLCEVVRG+AGDLVEEV LID+FTN KK
Sbjct: 325 KGQLGIKFKPFSKYPPCYKDMSFWINESFTENNLCEVVRGIAGDLVEEVSLIDNFTN-KK 384

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           GMTSHCYRIAYRSMERSLTDEEINDLQ +VREQVQSKLNVVLR
Sbjct: 385 GMTSHCYRIAYRSMERSLTDEEINDLQMSVREQVQSKLNVVLR 426

[Close]

BLAST of CmoCh03G014890 vs. NCBI nr
Match: gi|1009129841|ref|XP_015881985.1| (PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Ziziphus jujuba])

HSP 1 Score: 636.7 bits (1641), Expect = 2.3e-179
Identity = 301/343 (87.76%), Postives = 323/343 (94.17%), Query Frame = 1


Query: 1   MQLHQRDNHPLGILKNEIYNYFDTNYSNKFTKFDDLSPIVSVKENFDDVLVPEDHVSRSY 60
           MQLH+RD HPLGILKN IY YFDT+YSNKF KFDDL PIVSVKENFDDVLVP DHVSRSY
Sbjct: 91  MQLHRRDKHPLGILKNAIYEYFDTSYSNKFDKFDDLCPIVSVKENFDDVLVPADHVSRSY 150

Query: 61  NDTYYIDSQTVLRCHTSAHQAELLRRGYTQFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 120
           NDTYY+DS+TVLRCHTSAHQAELLRRG+T FLVTGDVYRRDSIDSTHYPVFHQMEGVRVF
Sbjct: 151 NDTYYVDSETVLRCHTSAHQAELLRRGHTHFLVTGDVYRRDSIDSTHYPVFHQMEGVRVF 210

Query: 121 SLNDWEASGTDGTSFAADDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 180
           S  DW  SG D TS+AA+DLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK
Sbjct: 211 SPEDWSESGIDATSYAAEDLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIFFQEK 270

Query: 181 WLEVLGCGVMEQEILKRSDKENNVAWAFGLGLERLAMVLFDIPDIRLFWSADERFTTQFS 240
           WLEVLGCGV EQEILKRS K +NVAWAFGLGLERLAM+LFDIPDIRLFWS+DERFT+QFS
Sbjct: 271 WLEVLGCGVTEQEILKRSGKADNVAWAFGLGLERLAMILFDIPDIRLFWSSDERFTSQFS 330

Query: 241 KGKLGVKFKSFSKFPPCYKDISFWINDSFTENNLCEVVRGVAGDLVEEVQLIDSFTNKKK 300
            G+LG+KFK FSK+PPCYKD+SFWIN+SFTENNLCEVVRG+AGDLVEEV+LID+FTN KK
Sbjct: 331 TGQLGIKFKPFSKYPPCYKDVSFWINESFTENNLCEVVRGIAGDLVEEVRLIDNFTN-KK 390

Query: 301 GMTSHCYRIAYRSMERSLTDEEINDLQWNVREQVQSKLNVVLR 344
           GMTSHCYRIAYRSMERSLTDEEIN LQW+VREQVQ+KLNVV+R
Sbjct: 391 GMTSHCYRIAYRSMERSLTDEEINKLQWDVREQVQNKLNVVMR 432

The following BLAST results are available for this feature:

BLAST of CmoCh03G014890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYFM_ARATH	3.0e-171	81.92	Phenylalanine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana ...	[more]
SYFM_DICDI	2.1e-100	49.36	Phenylalanine--tRNA ligase, mitochondrial OS=Dictyostelium discoideum GN=mpheS P...	[more]
SYFM_MOUSE	2.7e-95	48.65	Phenylalanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Fars2 PE=1 SV=1	[more]
SYFM_HUMAN	8.7e-94	47.03	Phenylalanine--tRNA ligase, mitochondrial OS=Homo sapiens GN=FARS2 PE=1 SV=1	[more]
SYFM_RAT	7.3e-93	45.52	Phenylalanine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Fars2 PE=2 SV=...	[more]

BLAST of CmoCh03G014890 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCL5_CUCME	5.0e-189	93.59	Phenylalanyl-tRNA synthetase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KJ29_CUCSA	3.2e-188	93.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G526470 PE=4 SV=1	[more]
B9MWE6_POPTR	1.6e-179	88.34	Phenylalanyl-tRNA synthetase class IIc family protein OS=Populus trichocarpa GN=...	[more]
M5WGS0_PRUPE	3.6e-179	88.34	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006022mg PE=4 SV=1	[more]
A0A151TD69_CAJCA	5.2e-178	87.76	Uncharacterized protein OS=Cajanus cajan GN=KK1_019602 PE=4 SV=1	[more]

BLAST of CmoCh03G014890 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58140.1	1.7e-172	81.92	phenylalanyl-tRNA synthetase class IIc family protein	[more]
AT4G39280.1	7.5e-11	27.50	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase,...	[more]

BLAST of CmoCh03G014890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077965\|ref\|XP_008439478.1\|	7.1e-189	93.59	PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo...	[more]
gi\|449433501\|ref\|XP_004134536.1\|	4.6e-188	93.00	PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Cucumis sati...	[more]
gi\|657982497\|ref\|XP_008383288.1\|	1.3e-179	88.63	PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Malus domest...	[more]
gi\|566200587\|ref\|XP_006376212.1\|	2.3e-179	88.34	phenylalanyl-tRNA synthetase class IIc family protein [Populus trichocarpa]	[more]
gi\|1009129841\|ref\|XP_015881985.1\|	2.3e-179	87.76	PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Ziziphus juj...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002319	Phenylalanyl-tRNA_Synthase
IPR004530	Phe-tRNA-synth_IIc_mito
IPR005121	Fdx_antiC-bd
IPR006195	aa-tRNA-synth_II

Vocabulary: **Molecular Function**
Term	Definition
GO:0000049	tRNA binding
GO:0004812	aminoacyl-tRNA ligase activity
GO:0005524	ATP binding
GO:0000166	nucleotide binding
GO:0004826	phenylalanine-tRNA ligase activity
GO:0000287	magnesium ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0043039	tRNA aminoacylation
GO:0006432	phenylalanyl-tRNA aminoacylation
GO:0008033	tRNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0006432	phenylalanyl-tRNA aminoacylation
biological_process	GO:0048481	plant ovule development
biological_process	GO:0008033	tRNA processing
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0043039	tRNA aminoacylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009328	phenylalanine-tRNA ligase complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004826	phenylalanine-tRNA ligase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G014890.1	CmoCh03G014890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002319	Phenylalanyl-tRNA synthetase	PFAM	PF01409	tRNA-synt_2d	coord: 5..239 score: 5.3
IPR004530	Phenylalanyl-tRNA synthetase, class IIc, mitochondrial	TIGRFAMs	TIGR00469	TIGR00469	coord: 154..340 score: 2.6
IPR005121	Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding	GENE3D	G3DSA:3.30.70.380		coord: 256..343 score: 9.0
IPR005121	Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding	PFAM	PF03147	FDX-ACB	coord: 252..343 score: 2.0
IPR005121	Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding	SMART	SM00896	FDX_ACB_2	coord: 252..343 score: 1.9
IPR005121	Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding	PROFILE	PS51447	FDX_ACB	coord: 252..343 score: 25
IPR005121	Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding	unknown	SSF54991	Anticodon-binding domain of PheRS	coord: 247..343 score: 3.01
IPR006195	Aminoacyl-tRNA synthetase, class II	PROFILE	PS50862	AA_TRNA_LIGASE_II	coord: 95..256 score: 12
None	No IPR available	GENE3D	G3DSA:3.30.930.10		coord: 2..240 score: 5.5
None	No IPR available	PANTHER	PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	coord: 1..334 score: 2.2E
None	No IPR available	PANTHER	PTHR11538:SF41	PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL	coord: 1..334 score: 2.2E
None	No IPR available	unknown	SSF55681	Class II aaRS and biotin synthetases	coord: 3..239 score: 1.16

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G014890	Cucsa.048740	Cucumber (Gy14) v1	cgycmoB0040
CmoCh03G014890	CmaCh03G014860	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G014890	CmaCh07G000290	Cucurbita maxima (Rimu)	cmacmoB861
CmoCh03G014890	Cla009877	Watermelon (97103) v1	cmowmB619
CmoCh03G014890	Csa6G526470	Cucumber (Chinese Long) v2	cmocuB667
CmoCh03G014890	MELO3C007024	Melon (DHL92) v3.5.1	cmomeB606
CmoCh03G014890	ClCG01G025610	Watermelon (Charleston Gray)	cmowcgB573
CmoCh03G014890	CSPI06G37360	Wild cucumber (PI 183967)	cmocpiB678
CmoCh03G014890	Cp4.1LG19g05570	Cucurbita pepo (Zucchini)	cmocpeB618
CmoCh03G014890	Cp4.1LG10g06630	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G014890	MELO3C007024.2	Melon (DHL92) v3.6.1	cmomedB695
CmoCh03G014890	CsaV3_6G052840	Cucumber (Chinese Long) v3	cmocucB0791
CmoCh03G014890	Cla97C01G025750	Watermelon (97103) v2	cmowmbB639
CmoCh03G014890	Bhi03G000203	Wax gourd	cmowgoB0782
CmoCh03G014890	CsGy6G036720	Cucumber (Gy14) v2	cgybcmoB809
CmoCh03G014890	Carg24606	Silver-seed gourd	carcmoB1438
CmoCh03G014890	Carg14942	Silver-seed gourd	carcmoB0995

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G014890	CmoCh07G000310	Cucurbita moschata (Rifu)	cmocmoB459

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G014890	Bottle gourd (USVL1VR-Ls)	cmolsiB588