CmoCh03G013400 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAGACATAGACGTTATTGTTTTCGGTTTGTGGGGGCTTTCCTTTATTTTCTTGGAGCACACTATGCATTTGCATGCACCTCGCCTGGATTTCTGAAACCCCCACTTCTTCTCTACAACCCAAACCCAGAATCTCAATGCCCAGAACTTGACCCATCTGGGTTTGGTCTCAATTGACCCAGTTGTTGAAGTGGCTCATGATGCAAATGATTAGAACAGCACCCCAGTTCGAGTTTGAGCTCTGAAATCAACTTGATTAGCATGAAAAGGGAAGCAAGAAGTGCAAAAGTGTCAGGGGTTAAGAGGAGTGGAGGGTATGATTTAAGAGGATTGGGAAAGCTGAAAGGTGTCTAGTTCCCAAGAGACAGGGGGGAGGGGCCATCCAAACTCGATTTGCATTGTAATGTGTTGTGCGATTAAACTAATGGAGTTGAAGGGTTTTCACGTGCCAATGGCGACCTTTGCGGCTATTTCAAACTTTATTCTTACTTTTTAGGCGGTGGGTTCAATTCATTGCGGCCACTGAGGCGAGGCGAGGCGAGGCGAGGCGGCTAGGGCGGGAGCTTGGCGAATCTAGGGAATCATGTTCTTGTTTTCCCAACTTTGAAAAACATTCACAATCTAACAATTTTGTCAAACTCAATCACTTTTCTGTCCCCTCGCCTTTTCAAATGGATGGAATGGATCGTGGACCTTGTTGGCTGGGCCAAGCCTAACCCATTATCATATGGGCTGATCGACACCAAAACCCAAACCGGCCCTTCTCGCTAGCCTACTGATTAATAATAAGAAAAAGAATTATGTGGACTGTTATGATTTTTATGGTCAAATTGATGATCTGTTTGGCGCTGTGTCAGTTTTGTTGGCGGCGAATGCGCAGACCATCGTGGAGGGAGAGGGCGTTTCCAGTTGCCACGTCTGTTTCCAGTCATTGCCCTTTCCCAATTCCCTCCGCCTCTTTTCCCCGTTCTCTCTTGTTTTCCATAATCTAACCTACCTATCGTCTTCTTTGCTCGGAAACCATGAATATTTTCAGGTTCGCCGGCGATATGACACACTTGATCAGTATTTTAATTCTTCTTCTCAAAATATACGCTACTAAATCCTGCTCCGGTAATTATCAGTGCTTTCATTTTTTTTTTTTTCTATTTGGTTCTGGCATTGAGGAAGAGAAAATGGTACGAAGAATTTGGAAACAAGCAGTGTGGGTCTCATTGGTGGATAAATGGAAATGGGATTCTGATATCGACTTCTTGAAGCAGGGCTTTAGTCAGTTCAGCTTCCGGATGGTGTTATAACTGATCAATTGAATTTTAATTAACTTTTTTGATGAAGTTTTGGTACTTTTTTGTGCTGATGATTGGAGCATTAGGGCTTTTTTGCCCCCCTTAGTTTTCGAGATAACTAGGTTAAAGATGGATTTTTACCGATTAGAGACTCCCTTCATCAGAACTTTTGCTGATTTTAAAATTTTTTATTTTGAAGGAATTTCTCTCAAGACTCAGGAGCTGTATGCCATTGTTTTTCTGGCCCGGTATTTGGATCTATTCACGGATTTCATATCTATCTATAACACTGTGATGAAGCTGATTTTTATAGCAAGCTCTCTGGCAATTGTTTGGTGCATGAGGCTGCATCCAACCGTGAGGCGGTCATATGATAAAGTTCTTGACACTTTTCGTCATTATTTTCTTGTTGCTGCATGTTTCATTCTCGCCCTTTTAGTGAACGAGAAGTTTGGGTTTCAAGAGGTGAGACATTTTTAATATAAATGATTTTAGTTTGCGTTTGATGGTTTGTGTGGAAGCATTGGCAATATACATAGTTATCGATTCCGTTCGTACAATTGATGAGCCTAATCAGTTCATTTTTTCCACATTTCATCCCAATTAGGCAATTTCCATATGTAATTAAAACCAAGATGATGATCTGTTCCCTAACTGCAAAAGTTCATATATTGGATTTGTGCAAGCCTGCACAAGCACTAGAGCATCACTGGAAACTCTCCTGGTCAAAAACTCATGAGCAGTTTTCTATCGCGGTGCATTCCTTACCCAAGTGTGATTAGGTCTTAACTATTCTCACGAAATATTTGCGTCCCTTAACGAACAATTCGAAGAGGTCCTGCAGAAACATTAGCGTCGAAACTAAAATTTTTGCAATGTAGTTTTATCATTTCCTATTACCCGTTTGCCATGTTACCTTCATAGACATGATGATTTCACTTTTGTTGATACTTGTTAGAAATGCTATATTTTGTCATTTTATTACTGTATAAATAATCCACATTGTTACTCTGATCCAATCCCCATTTAGGGTATCCCATGTACTCTCTAAATGAGCAAGGATATGATGCAATAGAAAATGATATTGTTGAACTTTTTTTGCTCCAGATCTTTTGGGCGTTTTCAATATACTTGGAGGCCGTAGCAATTCTTCCTCAATTAGTTTTATTGCAACGAAGTGGGAATGTGGACAATTTAACCAGTCATTATGTCTTCTTTCTTGGGTTCGTATATTTCCCTTTACGGTTGTTGGCGCTTTATGGAAGGATTACTTTCTTGCTTTGATAACCTCATCATCTTTAAAGGAATATGACCACTCACTCTTTTTCCATTTCTGCTGCTGGTCGTATTAGATGTAGTCGTATCCCTTAGAGGTATGACCAATCAAATCAATAAATTTTCTAATTGACATATATAAATGGGTTTTTAGATTCACATAGGTCAAGGATTTGGGTCAATTGCTGCCCTGAAAATTTATAGATTTCCTTAAAGTAGTCTCCTACAAAAGTGTTAAAAACTTTTGGATGCATGAGCATTATGATGCTGATTCCGACTGGTTTATGAAAAGTCCTTCATGTTCGATGTCAATGGACTAAACAGCCATGCATTACGCATCCAATATGTTCTTCAAGAAAATTTTACATGTTTGTCGTGAATTTATGATTGTTACCGGCCATTTTATCATGGAGAAGGTTTTGGCAAGTGGGTTGCAGATGAAATTTGTATAGATATTACAGATACAATTCCTGTTGATCTTCTTGGGAAGAAGCTCTTACTTTAGCTTAGATCCAAGCTTCTTCTTGGTGTACCCTCTCGTAATTGTTTTGCAAAAACAGTTCTTCTGATTGGAACTAAAATCATTCTGCAGAGCTTATCGTGCACTCTACATCCTCAACTGGATCTACCGATACTTCACATACACACACTTCAATCGGTGGATAGGTAAAGATTTGGGTTGGTCTTGGTCACACAAACTCTCAGTTGTTATCATTAGATGTCTTACATGATGTTTTGTTTCTTGTAGCTTTCATCGCTGGCCTGGTTCAGGCGGCTTTATATGCTGATTTTTTTTACTACTACTACATTAGGTGATTGAAGCAAACTCCTAGGGTATTGTTTTTGTTTTCTTATACACTGCTGTATCAATTCGTGCGATAATTTTCTTTTTTTAATCTACCTTTTGCAGCTGGAGAAACAATGCGAAGCTTCGGTTGCCAGCTTGA ACAGACATAGACGTTATTGTTTTCGGTTTGTGGGGGCTTTCCTTTATTTTCTTGGAGCACACTATGCATTTGCATGCACCTCGCCTGGATTTCTGAAACCCCCACTTCTTCTCTACAACCCAAACCCAGAATCTCAATGCCCAGAACTTGACCCATCTGGGTTTGGTCTCAATTGACCCAGTTGTTGAAGTGGCTCATGATGCAAATGATTAGAACAGCACCCCAGTTCGAGTTTGAGCTCTGAAATCAACTTGATTAGCATGAAAAGGGAAGCAAGAAGTGCAAAAGTGTCAGGGGTTAAGAGGAGTGGAGGGTATGATTTAAGAGGATTGGGAAAGCTGAAAGGTGTCTAGTTCCCAAGAGACAGGGGGGAGGGGCCATCCAAACTCGATTTGCATTGTAATGTGTTGTGCGATTAAACTAATGGAGTTGAAGGGTTTTCACGTGCCAATGGCGACCTTTGCGGCTATTTCAAACTTTATTCTTACTTTTTAGGCGGTGGGTTCAATTCATTGCGGCCACTGAGGCGAGGCGAGGCGAGGCGAGGCGGCTAGGGCGGGAGCTTGGCGAATCTAGGGAATCATGTTCTTGTTTTCCCAACTTTGAAAAACATTCACAATCTAACAATTTTGTCAAACTCAATCACTTTTCTGTCCCCTCGCCTTTTCAAATGGATGGAATGGATCGTGGACCTTGTTGGCTGGGCCAAGCCTAACCCATTATCATATGGGCTGATCGACACCAAAACCCAAACCGGCCCTTCTCGCTAGCCTACTGATTAATAATAAGAAAAAGAATTATGTGGACTGTTATGATTTTTATGGTCAAATTGATGATCTGTTTGGCGCTGTGTCAGTTTTGTTGGCGGCGAATGCGCAGACCATCGTGGAGGGAGAGGGCGTTTCCAGTTGCCACGTCTGTTTCCAGTCATTGCCCTTTCCCAATTCCCTCCGCCTCTTTTCCCCGTTCTCTCTTGTTTTCCATAATCTAACCTACCTATCGTCTTCTTTGCTCGGAAACCATGAATATTTTCAGGTTCGCCGGCGATATGACACACTTGATCAGTATTTTAATTCTTCTTCTCAAAATATACGCTACTAAATCCTGCTCCGGAATTTCTCTCAAGACTCAGGAGCTGTATGCCATTGTTTTTCTGGCCCGGTATTTGGATCTATTCACGGATTTCATATCTATCTATAACACTGTGATGAAGCTGATTTTTATAGCAAGCTCTCTGGCAATTGTTTGGTGCATGAGGCTGCATCCAACCGTGAGGCGGTCATATGATAAAGTTCTTGACACTTTTCGTCATTATTTTCTTGTTGCTGCATGTTTCATTCTCGCCCTTTTAGTGAACGAGAAGTTTGGGTTTCAAGAGATCTTTTGGGCGTTTTCAATATACTTGGAGGCCGTAGCAATTCTTCCTCAATTAGTTTTATTGCAACGAAGTGGGAATGTGGACAATTTAACCAGTCATTATGTCTTCTTTCTTGGAGCTTATCGTGCACTCTACATCCTCAACTGGATCTACCGATACTTCACATACACACACTTCAATCGGTGGATAGCTTTCATCGCTGGCCTGGTTCAGGCGGCTTTATATGCTGATTTTTTTTACTACTACTACATTAGCTGGAGAAACAATGCGAAGCTTCGGTTGCCAGCTTGA ATGAATATTTTCAGGTTCGCCGGCGATATGACACACTTGATCAGTATTTTAATTCTTCTTCTCAAAATATACGCTACTAAATCCTGCTCCGGAATTTCTCTCAAGACTCAGGAGCTGTATGCCATTGTTTTTCTGGCCCGGTATTTGGATCTATTCACGGATTTCATATCTATCTATAACACTGTGATGAAGCTGATTTTTATAGCAAGCTCTCTGGCAATTGTTTGGTGCATGAGGCTGCATCCAACCGTGAGGCGGTCATATGATAAAGTTCTTGACACTTTTCGTCATTATTTTCTTGTTGCTGCATGTTTCATTCTCGCCCTTTTAGTGAACGAGAAGTTTGGGTTTCAAGAGATCTTTTGGGCGTTTTCAATATACTTGGAGGCCGTAGCAATTCTTCCTCAATTAGTTTTATTGCAACGAAGTGGGAATGTGGACAATTTAACCAGTCATTATGTCTTCTTTCTTGGAGCTTATCGTGCACTCTACATCCTCAACTGGATCTACCGATACTTCACATACACACACTTCAATCGGTGGATAGCTTTCATCGCTGGCCTGGTTCAGGCGGCTTTATATGCTGATTTTTTTTACTACTACTACATTAGCTGGAGAAACAATGCGAAGCTTCGGTTGCCAGCTTGA
BLAST of CmoCh03G013400 vs. Swiss-Prot
Match: ERD2A_ARATH (ER lumen protein-retaining receptor A OS=Arabidopsis thaliana GN=ERD2A PE=2 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 1.8e-97 Identity = 173/215 (80.47%), Postives = 195/215 (90.70%), Query Frame = 1
BLAST of CmoCh03G013400 vs. Swiss-Prot
Match: ERD2_PETHY (ER lumen protein-retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 3.2e-86 Identity = 154/215 (71.63%), Postives = 180/215 (83.72%), Query Frame = 1
BLAST of CmoCh03G013400 vs. Swiss-Prot
Match: ERD2B_ARATH (ER lumen protein-retaining receptor B OS=Arabidopsis thaliana GN=ERD2B PE=1 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.3e-83 Identity = 148/215 (68.84%), Postives = 176/215 (81.86%), Query Frame = 1
BLAST of CmoCh03G013400 vs. Swiss-Prot
Match: ERD2_DROME (ER lumen protein-retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 4.8e-58 Identity = 115/215 (53.49%), Postives = 162/215 (75.35%), Query Frame = 1
BLAST of CmoCh03G013400 vs. Swiss-Prot
Match: ERD21_XENTR (ER lumen protein-retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 5.9e-56 Identity = 119/215 (55.35%), Postives = 152/215 (70.70%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TrEMBL
Match: A0A0A0KIB4_CUCSA (ER lumen protein-retaining receptor OS=Cucumis sativus GN=Csa_6G520260 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 3.6e-105 Identity = 197/215 (91.63%), Postives = 205/215 (95.35%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TrEMBL
Match: E5GC27_CUCME (ER lumen protein-retaining receptor OS=Cucumis melo subsp. melo PE=3 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 3.1e-104 Identity = 196/215 (91.16%), Postives = 203/215 (94.42%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TrEMBL
Match: V4U9Z0_9ROSI (ER lumen protein-retaining receptor OS=Citrus clementina GN=CICLE_v10016666mg PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 9.3e-101 Identity = 184/215 (85.58%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TrEMBL
Match: B9S8E2_RICCO (ER lumen protein-retaining receptor OS=Ricinus communis GN=RCOM_1251840 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 6.0e-100 Identity = 187/215 (86.98%), Postives = 201/215 (93.49%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TrEMBL
Match: D7TJQ1_VITVI (ER lumen protein-retaining receptor OS=Vitis vinifera GN=VIT_10s0003g01700 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.0e-99 Identity = 185/215 (86.05%), Postives = 201/215 (93.49%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TAIR10
Match: AT1G29330.1 (AT1G29330.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 356.7 bits (914), Expect = 1.0e-98 Identity = 173/215 (80.47%), Postives = 195/215 (90.70%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TAIR10
Match: AT3G25040.1 (AT3G25040.1 endoplasmic reticulum retention defective 2B) HSP 1 Score: 308.9 bits (790), Expect = 2.4e-84 Identity = 148/215 (68.84%), Postives = 176/215 (81.86%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TAIR10
Match: AT3G25160.1 (AT3G25160.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24 Identity = 77/213 (36.15%), Postives = 117/213 (54.93%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TAIR10
Match: AT2G21190.1 (AT2G21190.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22 Identity = 74/229 (32.31%), Postives = 124/229 (54.15%), Query Frame = 1
BLAST of CmoCh03G013400 vs. TAIR10
Match: AT4G38790.1 (AT4G38790.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 100.9 bits (250), Expect = 1.0e-21 Identity = 76/229 (33.19%), Postives = 122/229 (53.28%), Query Frame = 1
BLAST of CmoCh03G013400 vs. NCBI nr
Match: gi|449433672|ref|XP_004134621.1| (PREDICTED: ER lumen protein-retaining receptor A [Cucumis sativus]) HSP 1 Score: 389.0 bits (998), Expect = 5.2e-105 Identity = 197/215 (91.63%), Postives = 205/215 (95.35%), Query Frame = 1
BLAST of CmoCh03G013400 vs. NCBI nr
Match: gi|659078422|ref|XP_008439716.1| (PREDICTED: ER lumen protein-retaining receptor A [Cucumis melo]) HSP 1 Score: 386.0 bits (990), Expect = 4.4e-104 Identity = 196/215 (91.16%), Postives = 203/215 (94.42%), Query Frame = 1
BLAST of CmoCh03G013400 vs. NCBI nr
Match: gi|568826493|ref|XP_006467606.1| (PREDICTED: ER lumen protein-retaining receptor A [Citrus sinensis]) HSP 1 Score: 374.8 bits (961), Expect = 1.0e-100 Identity = 184/215 (85.58%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of CmoCh03G013400 vs. NCBI nr
Match: gi|567914477|ref|XP_006449552.1| (hypothetical protein CICLE_v10016666mg [Citrus clementina]) HSP 1 Score: 374.4 bits (960), Expect = 1.3e-100 Identity = 184/215 (85.58%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of CmoCh03G013400 vs. NCBI nr
Match: gi|255562510|ref|XP_002522261.1| (PREDICTED: ER lumen protein-retaining receptor A [Ricinus communis]) HSP 1 Score: 371.7 bits (953), Expect = 8.6e-100 Identity = 187/215 (86.98%), Postives = 201/215 (93.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |