CmoCh03G012900 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGTGGAAACAAATATGGTGATAAGATGATGTGGTTCGGTAATACAAACGACGCCGTCTCCGCTGTGGATGCTCATCTCTTTACAGCCGGAAACCACCAAGATGACCGATCACCGGTCGCATTTCCAGCCCTAGCTTGCCCAACCTGTGCACACCCTCTTCACTTCCAACTCCAACTCCAGGTTATAAATAATAATAAATATTTTTTAAATTTAATTAGTTCGACTCTATTTTATTGTTGAAGAATAATTAATTAAAAATATAATTATGAAATTACATGTAGTTGCGGAAATGTGTATTTTATTTATTTAAACATGATGAATTGAGTCATCTATTTTTGTACGAAGAATTGTCATGATATAATTAATTAATTAATTTAGGGCGGATTGGAAGATTGGGGGAGGGCTCCGGCGGGAGTGAAGTTCGATCCAAGTGACCGACAAATTTTGGAACATTTAGAGGCGAAAGTGAAACGAGATAAGCGAAAGCTTCATCCTCTCATCGATGAATTCATTACTACATTAGAGGGAGATGATGGGATTTGTTACACCCACCCTCAAAATTTGCCTGGTACGCAAACATATCATGAGTCATTATGAGTACACAATCGATTGTACTTTTTATGTCTTCGATGTCATTAGCATAGTTACTAAACTCATTTGAATTTTTCATGCATCTACTAACTTTACTCATAACGTACATGATGTCTAGTCGGGTAGCTACTGATCCATCTTCATCTTTGCCCAATTTACTTCTTGGAACCATTGATTATGAATAGAATTTAAATGGCTTCATTCCAGAGATTAGCCACGTACTTATTCTAACACTAAAAAATATCTACCAACCTTATATGTTACTTACGAGACTAAAAAATATCTCTTATTGAGACTATATCTCAATGTGCTTATTTTAGTCCATATAAAGCACGAGCTCGTAGACTTTTCCTTCAGTTAGATGTCAAATTTGCCTTTTTGCTTGGAAAATTAACTGACATGGATTTGAAAAATGGGAGAAAGGAAAAGTCTAAGTTGAATAGTGTTTTGTATGGACTATACTTAGCCTAAGAGCCTACACATAATTGAATTTTGGAGTCATAGAGCGCAATATCTTTTCCACTACTTCGATATCAATTTTGTTTCATTAGCCTTCATCTTGTTCGTAATTACAAGTGTACATGAGAAATAGTTGTTGATAGTGACTCCTATCTTCACGTGGAGTATCTCAAATTCTTCCTCAATGTTTGTCATTGAGCTCGTTTAACCCAAGTTGAACTTTGATACTTCATCTTCATAGAGTCCCATAATCCTTGGCTGTGTCTTTCTTGATAATCGTTTTAAGAATGGAACGATCCAACGCCTAAACAAATAATTCTTTGTTTTCATGTCTTCGAACTTTTGATCATCAAGTTAACGTTGTTATGTTTGTATGTCGTTTTAAAACGTGCAATTGGGATTTCTATTTCTACCAAATTCTAATATTTTTTTTAATGCCTCTTAGAAGAGAAAATAGTTGCAAATGTATTTAGTGATATATTTAATTTAAAATTTTAAGAAGGAAGAGGAAGATTAAACGTACATGAAATTCTAAAGCTTTGTGCTTGGAAAATTGCAGGAATGAGGAAAGACGGCCAAATCCGGCACTTTTTTCATCGCCCATCAAAAGCATATACGGCCGGCACAAGAAAACGCAGGAAAGTTAAAGAAGACGAAGAAGGCACCGACACAAGATGGCACAAAACCGGGAAGACAAGGCCAGTCATGGGCGGCGGCGTTGTGATGGGTTTCAAGAAGATTTTAGTTCTGTATTCCAAACATGGGAACCAAAGGAAGCCTCAAAAGACAAACTGGATAATGCATCAGTACCATCTGGGTGTTACAGAGCACGAGAAAGACGGCCAATTGGTGGCATCAAAGGTCTTCTTCCAAAAACGGCCTCGCCAAAGCTCCTCCTATCAGAACCCGACTACACAATGGGATGGCGGTGGCCATTCGCCTGAAATAAGTGCAGTTTTTATTGATTGCAGCAACCCAATGATGAGTTCTAATTACGTGTAATGAATAATTAACTAGTTTTAAGAAGTTGAATTCAACCATAGTGTTGATAAGCTTAAAATGTACGTTGTTAGGTTCAAGTTGTAAGGTCCAAACCCTCAAAAAAGCCTCCTGCATGGAAACTGTATGCTATGTTCATCCTCCT AAGTGGAAACAAATATGGTGATAAGATGATGTGGTTCGGTAATACAAACGACGCCGTCTCCGCTGTGGATGCTCATCTCTTTACAGCCGGAAACCACCAAGATGACCGATCACCGGTCGCATTTCCAGCCCTAGCTTGCCCAACCTGTGCACACCCTCTTCACTTCCAACTCCAACTCCAGGGCGGATTGGAAGATTGGGGGAGGGCTCCGGCGGGAGTGAAGTTCGATCCAAGTGACCGACAAATTTTGGAACATTTAGAGGCGAAAGTGAAACGAGATAAGCGAAAGCTTCATCCTCTCATCGATGAATTCATTACTACATTAGAGGGAGATGATGGGATTTGTTACACCCACCCTCAAAATTTGCCTGGAATGAGGAAAGACGGCCAAATCCGGCACTTTTTTCATCGCCCATCAAAAGCATATACGGCCGGCACAAGAAAACGCAGGAAAGTTAAAGAAGACGAAGAAGGCACCGACACAAGATGGCACAAAACCGGGAAGACAAGGCCAGTCATGGGCGGCGGCGTTGTGATGGGTTTCAAGAAGATTTTAGTTCTGTATTCCAAACATGGGAACCAAAGGAAGCCTCAAAAGACAAACTGGATAATGCATCAGTACCATCTGGGTGTTACAGAGCACGAGAAAGACGGCCAATTGGTGGCATCAAAGGTCTTCTTCCAAAAACGGCCTCGCCAAAGCTCCTCCTATCAGAACCCGACTACACAATGGGATGGCGGTGGCCATTCGCCTGAAATAAGTGCAGTTTTTATTGATTGCAGCAACCCAATGATGAGTTCTAATTACGTGTAATGAATAATTAACTAGTTTTAAGAAGTTGAATTCAACCATAGTGTTGATAAGCTTAAAATGTACGTTGTTAGGTTCAAGTTGTAAGGTCCAAACCCTCAAAAAAGCCTCCTGCATGGAAACTGTATGCTATGTTCATCCTCCT ATGATGTGGTTCGGTAATACAAACGACGCCGTCTCCGCTGTGGATGCTCATCTCTTTACAGCCGGAAACCACCAAGATGACCGATCACCGGTCGCATTTCCAGCCCTAGCTTGCCCAACCTGTGCACACCCTCTTCACTTCCAACTCCAACTCCAGGGCGGATTGGAAGATTGGGGGAGGGCTCCGGCGGGAGTGAAGTTCGATCCAAGTGACCGACAAATTTTGGAACATTTAGAGGCGAAAGTGAAACGAGATAAGCGAAAGCTTCATCCTCTCATCGATGAATTCATTACTACATTAGAGGGAGATGATGGGATTTGTTACACCCACCCTCAAAATTTGCCTGGAATGAGGAAAGACGGCCAAATCCGGCACTTTTTTCATCGCCCATCAAAAGCATATACGGCCGGCACAAGAAAACGCAGGAAAGTTAAAGAAGACGAAGAAGGCACCGACACAAGATGGCACAAAACCGGGAAGACAAGGCCAGTCATGGGCGGCGGCGTTGTGATGGGTTTCAAGAAGATTTTAGTTCTGTATTCCAAACATGGGAACCAAAGGAAGCCTCAAAAGACAAACTGGATAATGCATCAGTACCATCTGGGTGTTACAGAGCACGAGAAAGACGGCCAATTGGTGGCATCAAAGGTCTTCTTCCAAAAACGGCCTCGCCAAAGCTCCTCCTATCAGAACCCGACTACACAATGGGATGGCGGTGGCCATTCGCCTGAAATAAGTGCAGTTTTTATTGATTGCAGCAACCCAATGATGAGTTCTAATTACGTGTAA
BLAST of CmoCh03G012900 vs. Swiss-Prot
Match: NAC10_ARATH (NAC domain-containing protein 10 OS=Arabidopsis thaliana GN=NAC010 PE=2 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.5e-77 Identity = 135/206 (65.53%), Postives = 158/206 (76.70%), Query Frame = 1
BLAST of CmoCh03G012900 vs. Swiss-Prot
Match: NAC73_ARATH (NAC domain-containing protein 73 OS=Arabidopsis thaliana GN=NAC073 PE=2 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.5e-74 Identity = 134/230 (58.26%), Postives = 173/230 (75.22%), Query Frame = 1
BLAST of CmoCh03G012900 vs. Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.3e-52 Identity = 106/210 (50.48%), Postives = 136/210 (64.76%), Query Frame = 1
BLAST of CmoCh03G012900 vs. Swiss-Prot
Match: NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09 Identity = 46/142 (32.39%), Postives = 64/142 (45.07%), Query Frame = 1
BLAST of CmoCh03G012900 vs. Swiss-Prot
Match: NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09 Identity = 51/156 (32.69%), Postives = 74/156 (47.44%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TrEMBL
Match: A0A0A0KLJ8_CUCSA (NAC domain-containing protein 21/22 OS=Cucumis sativus GN=Csa_6G518170 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.3e-80 Identity = 149/220 (67.73%), Postives = 173/220 (78.64%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TrEMBL
Match: B9RB87_RICCO (NAC domain-containing protein 21/22, putative OS=Ricinus communis GN=RCOM_1673050 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 5.5e-79 Identity = 142/233 (60.94%), Postives = 172/233 (73.82%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TrEMBL
Match: A0A0H4TGA3_MOMCH (NAC domain-containing protein 8 OS=Momordica charantia PE=2 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78 Identity = 147/232 (63.36%), Postives = 176/232 (75.86%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TrEMBL
Match: A0A060A5P2_BOENI (NAC domain-containing protein OS=Boehmeria nivea GN=NAC15 PE=2 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 3.5e-78 Identity = 138/193 (71.50%), Postives = 159/193 (82.38%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TrEMBL
Match: M5WU50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008828mg PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 6.0e-78 Identity = 141/220 (64.09%), Postives = 166/220 (75.45%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TAIR10
Match: AT1G28470.1 (AT1G28470.1 NAC domain containing protein 10) HSP 1 Score: 290.0 bits (741), Expect = 1.4e-78 Identity = 135/206 (65.53%), Postives = 158/206 (76.70%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TAIR10
Match: AT4G28500.1 (AT4G28500.1 NAC domain containing protein 73) HSP 1 Score: 279.3 bits (713), Expect = 2.5e-75 Identity = 134/230 (58.26%), Postives = 173/230 (75.22%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TAIR10
Match: AT4G29230.1 (AT4G29230.1 NAC domain containing protein 75) HSP 1 Score: 255.4 bits (651), Expect = 3.9e-68 Identity = 124/216 (57.41%), Postives = 152/216 (70.37%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TAIR10
Match: AT5G56620.1 (AT5G56620.1 NAC domain containing protein 99) HSP 1 Score: 236.9 bits (603), Expect = 1.4e-62 Identity = 112/205 (54.63%), Postives = 147/205 (71.71%), Query Frame = 1
BLAST of CmoCh03G012900 vs. TAIR10
Match: AT1G25580.1 (AT1G25580.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 208.0 bits (528), Expect = 7.1e-54 Identity = 106/210 (50.48%), Postives = 136/210 (64.76%), Query Frame = 1
BLAST of CmoCh03G012900 vs. NCBI nr
Match: gi|659078590|ref|XP_008439804.1| (PREDICTED: NAC domain-containing protein 8 [Cucumis melo]) HSP 1 Score: 308.9 bits (790), Expect = 8.4e-81 Identity = 148/217 (68.20%), Postives = 175/217 (80.65%), Query Frame = 1
BLAST of CmoCh03G012900 vs. NCBI nr
Match: gi|778720964|ref|XP_004134944.2| (PREDICTED: NAC domain-containing protein 8-like [Cucumis sativus]) HSP 1 Score: 307.8 bits (787), Expect = 1.9e-80 Identity = 149/220 (67.73%), Postives = 173/220 (78.64%), Query Frame = 1
BLAST of CmoCh03G012900 vs. NCBI nr
Match: gi|255536709|ref|XP_002509421.1| (PREDICTED: NAC domain-containing protein 73 [Ricinus communis]) HSP 1 Score: 302.4 bits (773), Expect = 7.8e-79 Identity = 142/233 (60.94%), Postives = 172/233 (73.82%), Query Frame = 1
BLAST of CmoCh03G012900 vs. NCBI nr
Match: gi|659068126|ref|XP_008442882.1| (PREDICTED: NAC domain-containing protein 8-like [Cucumis melo]) HSP 1 Score: 302.0 bits (772), Expect = 1.0e-78 Identity = 153/270 (56.67%), Postives = 184/270 (68.15%), Query Frame = 1
BLAST of CmoCh03G012900 vs. NCBI nr
Match: gi|874969622|gb|AKQ06197.1| (NAC domain-containing protein 8 [Momordica charantia]) HSP 1 Score: 301.2 bits (770), Expect = 1.7e-78 Identity = 147/232 (63.36%), Postives = 176/232 (75.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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