CmoCh03G011520 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G011520
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr03 : 9133826 .. 9134095 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGATTCGCAGAGGAAAACGCCGTCGTATACGGCGGCGTTAACTATCGCCGCCATCGCCTTCGCTTCTCTGTTCTGTTCTGTTTTGTCTTATCGGCGGCCGCCACCTCGCCCGAATGTCATCGTTCCTCGCCGTCTAGATCTCGAATCCGACGCTCCAGAACAGGTATTTATTTTCTTCTTCGGACCTCATTTTTTGTGTCGTTAAATTACGAGGGAGGGGAAAACTGTAAGAAATTTGTTTGGAGAGATGAAGAGAAGGGTATAA

mRNA sequence

ATGACGGATTCGCAGAGGAAAACGCCGTCGTATACGGCGGCGTTAACTATCGCCGCCATCGCCTTCGCTTCTCTGTTCTGTTCTGTTTTGTCTTATCGGCGGCCGCCACCTCGCCCGAATGTCATCGTTCCTCGCCGTCTAGATCTCGAATCCGACGCTCCAGAACAGAGAAGGGTATAA

Coding sequence (CDS)

ATGACGGATTCGCAGAGGAAAACGCCGTCGTATACGGCGGCGTTAACTATCGCCGCCATCGCCTTCGCTTCTCTGTTCTGTTCTGTTTTGTCTTATCGGCGGCCGCCACCTCGCCCGAATGTCATCGTTCCTCGCCGTCTAGATCTCGAATCCGACGCTCCAGAACAGAGAAGGGTATAA
Homology
[Close]
BLAST of CmoCh03G011520 vs. TrEMBL
Match: A0A0A0KIN1_CUCSA (Purple acid phosphatase OS=Cucumis sativus GN=Csa_6G452090 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-08
Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 1 

Query: 1  MTDSQRKTPSYTAALTIAAIAFASLFCSVLSYRRPPPRPNVIVPRRLDLESDAPEQ 57
          M DS  KTP   A   +A +AFASLF  V SY RPPPR N+ VPRR DL+S +PEQ
Sbjct: 1  MADSHTKTPLTIALAILAILAFASLFSPVSSYNRPPPRRNLFVPRRRDLDSHSPEQ 56

[Close]
BLAST of CmoCh03G011520 vs. NCBI nr
Match: gi|659125199|ref|XP_008462561.1| (PREDICTED: probable purple acid phosphatase 20 isoform X1 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 7.8e-11
Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 1 

Query: 1  MTDSQRKTPSYTAALTI----AAIAFASLFCSVLSYRRPPPRPNVIVPRRLDLESDAPEQ 57
          M DS RKTPS+  ALTI    A +AFASLF +V SY RPPPR N+ VPRR DL+SD+PEQ
Sbjct: 1  MADSHRKTPSFPPALTIALALAIVAFASLFSAVSSYHRPPPRRNLFVPRRRDLDSDSPEQ 60

[Close]
BLAST of CmoCh03G011520 vs. NCBI nr
Match: gi|778717469|ref|XP_004143318.2| (PREDICTED: probable purple acid phosphatase 20 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 6.2e-08
Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 1 

Query: 1  MTDSQRKTPSYTAALTIAAIAFASLFCSVLSYRRPPPRPNVIVPRRLDLESDAPEQ 57
          M DS  KTP   A   +A +AFASLF  V SY RPPPR N+ VPRR DL+S +PEQ
Sbjct: 1  MADSHTKTPLTIALAILAILAFASLFSPVSSYNRPPPRRNLFVPRRRDLDSHSPEQ 56

The following BLAST results are available for this feature:
BLAST of CmoCh03G011520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh03G011520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIN1_CUCSA4.3e-0858.93Purple acid phosphatase OS=Cucumis sativus GN=Csa_6G452090 PE=3 SV=1[more]
BLAST of CmoCh03G011520 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh03G011520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125199|ref|XP_008462561.1|7.8e-1165.00PREDICTED: probable purple acid phosphatase 20 isoform X1 [Cucumis melo][more]
gi|778717469|ref|XP_004143318.2|6.2e-0858.93PREDICTED: probable purple acid phosphatase 20 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G011520.1CmoCh03G011520.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G011520Watermelon (97103) v2cmowmbB643
CmoCh03G011520Watermelon (97103) v2cmowmbB654
CmoCh03G011520Watermelon (97103) v2cmowmbB662
CmoCh03G011520Wax gourdcmowgoB0784
CmoCh03G011520Wax gourdcmowgoB0764
CmoCh03G011520Cucurbita moschata (Rifu)cmocmoB217
CmoCh03G011520Cucurbita moschata (Rifu)cmocmoB430
CmoCh03G011520Cucurbita moschata (Rifu)cmocmoB454
CmoCh03G011520Cucurbita moschata (Rifu)cmocmoB455
CmoCh03G011520Cucumber (Gy14) v1cgycmoB0148
CmoCh03G011520Cucumber (Gy14) v1cgycmoB0680
CmoCh03G011520Cucurbita maxima (Rimu)cmacmoB263
CmoCh03G011520Cucurbita maxima (Rimu)cmacmoB653
CmoCh03G011520Cucurbita maxima (Rimu)cmacmoB827
CmoCh03G011520Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G011520Wild cucumber (PI 183967)cmocpiB659
CmoCh03G011520Wild cucumber (PI 183967)cmocpiB681
CmoCh03G011520Cucumber (Chinese Long) v2cmocuB648
CmoCh03G011520Cucumber (Chinese Long) v2cmocuB670
CmoCh03G011520Melon (DHL92) v3.5.1cmomeB590
CmoCh03G011520Melon (DHL92) v3.5.1cmomeB598
CmoCh03G011520Watermelon (Charleston Gray)cmowcgB568
CmoCh03G011520Watermelon (Charleston Gray)cmowcgB581
CmoCh03G011520Watermelon (Charleston Gray)cmowcgB589
CmoCh03G011520Watermelon (97103) v1cmowmB605
CmoCh03G011520Watermelon (97103) v1cmowmB632
CmoCh03G011520Watermelon (97103) v1cmowmB641
CmoCh03G011520Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G011520Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G011520Cucurbita pepo (Zucchini)cmocpeB635
CmoCh03G011520Cucurbita pepo (Zucchini)cmocpeB641
CmoCh03G011520Bottle gourd (USVL1VR-Ls)cmolsiB576
CmoCh03G011520Bottle gourd (USVL1VR-Ls)cmolsiB582
CmoCh03G011520Bottle gourd (USVL1VR-Ls)cmolsiB597
CmoCh03G011520Cucumber (Gy14) v2cgybcmoB383
CmoCh03G011520Cucumber (Gy14) v2cgybcmoB811
CmoCh03G011520Melon (DHL92) v3.6.1cmomedB676
CmoCh03G011520Melon (DHL92) v3.6.1cmomedB687
CmoCh03G011520Silver-seed gourdcarcmoB0207
CmoCh03G011520Silver-seed gourdcarcmoB0336
CmoCh03G011520Silver-seed gourdcarcmoB0349
CmoCh03G011520Silver-seed gourdcarcmoB1095
CmoCh03G011520Silver-seed gourdcarcmoB1238
CmoCh03G011520Cucumber (Chinese Long) v3cmocucB0771
CmoCh03G011520Cucumber (Chinese Long) v3cmocucB0794