CmoCh03G010320 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G010320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING finger protein 5
LocationCmo_Chr03 : 7732278 .. 7735478 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAATCGGAGCAAAATTGGAGAAGGGGGAACGGTAATTTGTGGACGATGTAGAAAATTTGGGCTGTTTTTTAGGGGAAATAGACTTTTTTTTTTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTAATAATTATTTTACCTTTCACACGTGTGTGCGTCTCTAACCCGTGATGTCATATTTATTATTATTATTTATTAAAATACCATTTGAGTGTATAAATTAAAAGGATAAATGAGATAATTTATGATCTTATTAATCAAATTTACGTGATTATTTAACAAAAAAAAACTATTTTAAGCGTTATTTAATATAAATAATTACAAACTACAAGCAGATCTCCACCCTTATTATTATTATTATTATTTCCAAATACATTAATTACGAAATAGCCTAATTAATACTATCAACAGTTATATATAAACTCCCTTTTTCATTATTTTTTTTTATTTCTTTTTACCTTATAGTGTATAACAGATTTGATTATATACTTTTAAAATTTTACTTAATAAAAAGTTGATGGAGTGATTAAAAGAATAAATAGTATGATTAAATTAAAATTAATTATTAAAATATCGAATTTTGATGGCTTTGAATTGATTCAATTTTTTTTTATTGATATTAATATTTTATTTCCCTGAGTTGATGAATATCAATTTTGGAAAAAGTCAATGCATTCTATTCATGATTGAAAAAATAAGTTATTTGGTTAAATAATTAAATATTAAAATAATTTAATACATAAAGTTTTTTGTTTTGGTAATTCAACTTTCAAAATCTACATTTTAATCCCTAAATTTTTTTAAAAATAATAATTTTGATAGATTAATTTATTAAAATAGAAATTAAAATAAGGGTCAAAACGCAGCGTTTTATCCCAATTTATAAGAGAGAGAGAAGATGTGATGGTGGAGTACAAGTGGATGAAACTCGATCGAACGGCCTAAATTATCCGTCGACTTAAGAAATTAAATAATGATTTTAAAATGAATAAAAATTACATAAACAAAGCCCTTGAACTCTTCGTATCTTCTTCTTCTTCTTCCTCCGATTGTCCTCTCTTCTATGGTTTTCTGTAATTTCTAGGCCCGTTGCTCCTGATTTCACAGATTCCTTCCTTCACTAATATCGCCGATTTTCTTCCTCCTTGTTTTAGGAATCTGCTTTCCACCATTTCTGATTTCGTTCCTCTGAAGGTTTGTACACTTTCTTCCTCTCTATTTGCGTTGATTTTCTCTTGTTTTTCTTCAATCCATTTGTTTCCTTTGTTTTTCCCCTTTTTGCATCGCTGTGTTGTTGGTGTCAATTCGGTTACACTTTGCGTGTTCGGTGTGGATTCCAAAATTGGGGGTTTCTTCTTGTCTGTCATTTTGCATGGTTTTGGATCACGATCCCCTGATTTGTTTCTTTAATCGATTTTAATTAGCATCTGTTTTGCGATTTTAGTTAGTTTTGATGCTTTTGACTTTGATAGGATTGTAGGAGGTTGTTGAATCTTAATTCTGATTTTGTTTTGTTTCGTGATGTCTGGTGAATATAGCTGCTGATATTTGGGGTGGAAATTAAGATGGCGAATGAGTTTGGGGAATCAACAAGTGTGCCACATCAAAACCCTTCTTGGTCCAGTAATAGTGACAACACTAACAATGATACTGGCGATTTTGAATGCAATATCTGCTTCGAGTTAGCTCAAGACCCAATTATCACTCTTTGCGGCCATCTCTTTTGCTGGCCCTGTCTGTATAGATGGCTGCATCATCACTCGCAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTGTTCAGGAGGAGAAGTTGGTTCCTCTTTATGGTAGAGGTAAAGCACCATCTGACCCAAGATTAAATAGATATCCTGGTATTGATATTCCAAATCGCCCTGCCGGGCAAAGGCCTCAAACAGCACCACCCCCTGCAGCTAATGACTTTGCAAACTACGGGTTTGGATTCACTGGTGGCTTTATGCCAATGGCGGCAGCAAGGATTGGGAACTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAACATCCAGTTTCATGGATTTCCTGATGCTACAGTGTATGGAACCACCTCTGGTTACCCCTATGCATTCAACACATTCCATGGGGGTCATGGTCACCATTTTCCACAGCCACCGAGTCGAGGTCAGCATGCTGATAACGTACTGAAAAATCTCTTTTTACTCGTCGGCGTCTTCGTAATTCTTGCCTTGCTTTGGTGGTGAAAATAGCACAAGTGTAGAGATTTCATTTACTGCTTATGAAGTGAAGTAGTTTAGCTAATACTGCGATTTTATATATATATATATATATATATATATGTATGCTTGATAGTAGTACACTTACTGTGAGGTTCCCATTGATTCATGTTGTTCACATCCCAAAGGACTTCTGGATGTTTCTTTCTCCTGCACAGACCAGCCCATGTTCACTTCTTTACCCCACCAACAGAAATAAAGATCAGCTCTAATTTGTTTCAGCTAAGATTTCCTATGTATGATCCACTGATTATTGATCTTTCCCATCAAATTTCTTCATCTCAGCTTCAAAACCACACTGAAATTATTGATATTTTGTTACTGAAAAGAAATTTCTTTAGTTCCAAGTTTATTTGGCAGCCTGCTGAAACTAATAGACATGGCTGTTCCCCATTTTACTGAATTTGTGGTTGGATGGAT

mRNA sequence

ATGGCGAAATCGGAGCAAAATTGGAGAAGGGGGAACGGCCCGTTGCTCCTGATTTCACAGATTCCTTCCTTCACTAATATCGCCGATTTTCTTCCTCCTTGTTTTAGGAATCTGCTTTCCACCATTTCTGATTTCGTTCCTCTGAAGCTGCTGATATTTGGGGTGGAAATTAAGATGGCGAATGAGTTTGGGGAATCAACAAGTGTGCCACATCAAAACCCTTCTTGGTCCAGTAATAGTGACAACACTAACAATGATACTGGCGATTTTGAATGCAATATCTGCTTCGAGTTAGCTCAAGACCCAATTATCACTCTTTGCGGCCATCTCTTTTGCTGGCCCTGTCTGTATAGATGGCTGCATCATCACTCGCAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTGTTCAGGAGGAGAAGTTGGTTCCTCTTTATGGTAGAGGTAAAGCACCATCTGACCCAAGATTAAATAGATATCCTGGTATTGATATTCCAAATCGCCCTGCCGGGCAAAGGCCTCAAACAGCACCACCCCCTGCAGCTAATGACTTTGCAAACTACGGGTTTGGATTCACTGGTGGCTTTATGCCAATGGCGGCAGCAAGGATTGGGAACTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAACATCCAGTTTCATGGATTTCCTGATGCTACAGTGTATGGAACCACCTCTGGTTACCCCTATGCATTCAACACATTCCATGGGGGTCATGGTCACCATTTTCCACAGCCACCGAGTCGAGGTCAGCATGCTGATAACGTACTGAAAAATCTCTTTTTACTCGTCGGCGTCTTCGTAATTCTTGCCTTGCTTTGGTGGTGAAAATAGCACAAGTGTAGAGATTTCATTTACTGCTTATGAAGTGAAGTAGTTTAGCTAATACTGCGATTTTATATATATATATATATATATATATATGTATGCTTGATAGTAGTACACTTACTGTGAGGTTCCCATTGATTCATGTTGTTCACATCCCAAAGGACTTCTGGATGTTTCTTTCTCCTGCACAGACCAGCCCATGTTCACTTCTTTACCCCACCAACAGAAATAAAGATCAGCTCTAATTTGTTTCAGCTAAGATTTCCTATGTATGATCCACTGATTATTGATCTTTCCCATCAAATTTCTTCATCTCAGCTTCAAAACCACACTGAAATTATTGATATTTTGTTACTGAAAAGAAATTTCTTTAGTTCCAAGTTTATTTGGCAGCCTGCTGAAACTAATAGACATGGCTGTTCCCCATTTTACTGAATTTGTGGTTGGATGGAT

Coding sequence (CDS)

ATGGCGAAATCGGAGCAAAATTGGAGAAGGGGGAACGGCCCGTTGCTCCTGATTTCACAGATTCCTTCCTTCACTAATATCGCCGATTTTCTTCCTCCTTGTTTTAGGAATCTGCTTTCCACCATTTCTGATTTCGTTCCTCTGAAGCTGCTGATATTTGGGGTGGAAATTAAGATGGCGAATGAGTTTGGGGAATCAACAAGTGTGCCACATCAAAACCCTTCTTGGTCCAGTAATAGTGACAACACTAACAATGATACTGGCGATTTTGAATGCAATATCTGCTTCGAGTTAGCTCAAGACCCAATTATCACTCTTTGCGGCCATCTCTTTTGCTGGCCCTGTCTGTATAGATGGCTGCATCATCACTCGCAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTGTTCAGGAGGAGAAGTTGGTTCCTCTTTATGGTAGAGGTAAAGCACCATCTGACCCAAGATTAAATAGATATCCTGGTATTGATATTCCAAATCGCCCTGCCGGGCAAAGGCCTCAAACAGCACCACCCCCTGCAGCTAATGACTTTGCAAACTACGGGTTTGGATTCACTGGTGGCTTTATGCCAATGGCGGCAGCAAGGATTGGGAACTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAACATCCAGTTTCATGGATTTCCTGATGCTACAGTGTATGGAACCACCTCTGGTTACCCCTATGCATTCAACACATTCCATGGGGGTCATGGTCACCATTTTCCACAGCCACCGAGTCGAGGTCAGCATGCTGATAACGTACTGAAAAATCTCTTTTTACTCGTCGGCGTCTTCGTAATTCTTGCCTTGCTTTGGTGGTGA
Homology
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BLAST of CmoCh03G010320 vs. Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-28
Identity = 90/245 (36.73%), Postives = 124/245 (50.61%), Query Frame = 1 

Query: 67  TSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQC 126
           T  P + P+ SSN D    ++  FECNIC + A+D +++LCGHLFCWPCL +WL      
Sbjct: 5   TKAPSEEPTSSSNKD----ESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNN 64

Query: 127 QECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPPPAANDFAN 186
           Q CPVCK+ +   K+VP+YGRG   SDPR        +P RP GQR +  PPP    FA 
Sbjct: 65  QVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE--PPP--QSFAG 124

Query: 187 YGFGFTGGFMPMAAARIG-NFTLATAFGGLIPSLFNIQF-HG-FP---DATVYGTTSGYP 246
           + +G  GG M      +  +F + T   GL P +F + F  G FP    A+ +G  +   
Sbjct: 125 FNWGGDGGMMGGGGPNVHFSFGIGTV-NGLFPLMFMLPFIQGIFPLSFVASFFGNGNQGA 184

Query: 247 YAFNTFHGG------------HGH-HFPQ-------PPSRGQHADNVLKNLFLLVGVFVI 286
            A    +GG            HGH H P+       P SR    +  L N+F  +G F++
Sbjct: 185 AAAGGGNGGGNDGNDGTHAHTHGHTHGPRGHGESAAPGSRMAQEEEYLSNIFKYIGFFML 234

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BLAST of CmoCh03G010320 vs. Swiss-Prot
Match: RN185_CHICK (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus GN=RNF185 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-25
Identity = 77/174 (44.25%), Postives = 95/174 (54.60%), Query Frame = 1 

Query: 65  ESTSVPHQNPSWSSNS--DNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHH 124
           +S+S    + S SSN   DNTN D   FECNIC + A+D +I+LCGHLFCWPCL++WL  
Sbjct: 13  KSSSTGGTSGSSSSNGAGDNTNQDN-TFECNICLDTAKDAVISLCGHLFCWPCLHQWLET 72

Query: 125 HSQCQECPVCKALVQEEKLVPLYGRGK-APSDPRLNRYPGIDIPNRPAGQRPQTAPPPAA 184
               Q CPVCKA +  +K++PLYGRG     DPR         P RP GQRP+   P   
Sbjct: 73  RPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQRPE---PENR 132

Query: 185 NDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 236
             F  +GFG  GGF    +  IG F       G+  + FNI   G P   V GT
Sbjct: 133 GGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 167

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BLAST of CmoCh03G010320 vs. Swiss-Prot
Match: RN185_MOUSE (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24
Identity = 73/175 (41.71%), Postives = 91/175 (52.00%), Query Frame = 1 

Query: 66  STSVPHQNPSWSSNSDNTNNDTGD----FECNICFELAQDPIITLCGHLFCWPCLYRWLH 125
           S S  + N    S S N   ++G     FECNIC + A+D +I+LCGHLFCWPCL++WL 
Sbjct: 9   SASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLE 68

Query: 126 HHSQCQECPVCKALVQEEKLVPLYGRGK-APSDPRLNRYPGIDIPNRPAGQRPQTAPPPA 185
                Q CPVCKA +  +K++PLYGRG     DPR         P RP GQRP+   P  
Sbjct: 69  TRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQRPE---PEN 128

Query: 186 ANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 236
              F  +GFG  GGF    +  IG F       G+  + FNI   G P   V GT
Sbjct: 129 RGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 165

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BLAST of CmoCh03G010320 vs. Swiss-Prot
Match: RN185_PONAB (E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii GN=RNF185 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 75/183 (40.98%), Postives = 97/183 (53.01%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQN----PSWSSN-SDNTNNDTGDFECNICFELAQDPIITLCGHLFCW 118
           MA++   ++S P  +    PS SSN +  +      FECNIC + A+D +I+LCGHLFCW
Sbjct: 1   MASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCW 60

Query: 119 PCLYRWLHHHSQCQECPVCKALVQEEKLVPLYGRGK-APSDPRLNRYPGIDIPNRPAGQR 178
           PCL++WL      Q CPVCKA +  +K++PLYGRG     DPR         P RP GQR
Sbjct: 61  PCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQR 120

Query: 179 PQTAPPPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATV 236
           P+   P     F  +GFG  GGF    +  IG F       G+  + FNI   G P   V
Sbjct: 121 PE---PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAV 165

[Close]
BLAST of CmoCh03G010320 vs. Swiss-Prot
Match: RN185_RAT (E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-24
Identity = 75/179 (41.90%), Postives = 93/179 (51.96%), Query Frame = 1 

Query: 64  GESTSVPHQN-----PSWSSN-SDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 123
           G S S   +N     PS SSN +  +      FECNIC + A+D +I+LCGHLFCWPCL+
Sbjct: 5   GPSASASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLH 64

Query: 124 RWLHHHSQCQECPVCKALVQEEKLVPLYGRGK-APSDPRLNRYPGIDIPNRPAGQRPQTA 183
           +WL      Q CPVCKA +  +K++PLYGRG     DPR         P RP GQRP+  
Sbjct: 65  QWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRPQGQRPE-- 124

Query: 184 PPPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 236
            P     F  +GFG  GGF    +  IG F       G+  + FNI   G P   V GT
Sbjct: 125 -PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 165

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BLAST of CmoCh03G010320 vs. TrEMBL
Match: A0A0A0KG01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487690 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.5e-125
Identity = 211/229 (92.14%), Postives = 218/229 (95.20%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 118
           MANEFGESTS+PHQNPS S+NSD TNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 119 RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAP 178
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGK PSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120

Query: 179 PPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 238
           PP  N+F NYGFGF GGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 239 GYPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           GYPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229

[Close]
BLAST of CmoCh03G010320 vs. TrEMBL
Match: W9RK94_9ROSA (RING finger protein 5 OS=Morus notabilis GN=L484_009172 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.8e-105
Identity = 183/228 (80.26%), Postives = 196/228 (85.96%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MA+ FGESTSVP Q+PS S N  N   D GDFECNICFELAQDPI+TLCGHLFCWPCLYR
Sbjct: 1   MASGFGESTSVPPQSPSCSGNGVN---DAGDFECNICFELAQDPIVTLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 178
           WLHHHS  QECPVCKAL+QEEKLVPLYGRGK  SDPR   YPGI+IP+RP GQRPQTAPP
Sbjct: 61  WLHHHSHSQECPVCKALIQEEKLVPLYGRGKTQSDPRSKSYPGIEIPHRPTGQRPQTAPP 120

Query: 179 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 238
           P  N F NYGFGF GGF+PMA ARIGNFTL+TAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PEPNQFTNYGFGFMGGFVPMATARIGNFTLSTAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 239 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           +PY F++FHGGH H FPQP SRG  ADNVLKNL L++GVFVILALL W
Sbjct: 181 FPYGFHSFHGGHAHGFPQPSSRGHQADNVLKNLLLVIGVFVILALLCW 225

[Close]
BLAST of CmoCh03G010320 vs. TrEMBL
Match: M5WAB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011052mg PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.0e-103
Identity = 181/228 (79.39%), Postives = 195/228 (85.53%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MA+ FGESTSVP Q+PS S N+ N   D GDFECNICF+LAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MASGFGESTSVPPQSPSCSGNNAN---DVGDFECNICFDLAQDPIITLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 178
           WLHHHS  QECPVCKALVQEEKLVPLYGRGK  +DPR   YPGI+IPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSHSQECPVCKALVQEEKLVPLYGRGKTQTDPRSKSYPGINIPNRPAGQRPQTAPP 120

Query: 179 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 238
           P  N F NYG GF GGF+PMA ARIGNFTLATAFGGLIPSL NI +HGFPDATVYGTTSG
Sbjct: 121 PETNQFTNYGSGFMGGFVPMATARIGNFTLATAFGGLIPSLLNIHYHGFPDATVYGTTSG 180

Query: 239 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           +PY F++FHGGH H FPQP S+ Q  DNVLKNLFLL+GVFVILAL+ W
Sbjct: 181 FPYGFSSFHGGHAHGFPQPASQRQQVDNVLKNLFLLIGVFVILALICW 225

[Close]
BLAST of CmoCh03G010320 vs. TrEMBL
Match: B9T4V2_RICCO (Rnf5, putative OS=Ricinus communis GN=RCOM_0411590 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.9e-103
Identity = 178/233 (76.39%), Postives = 198/233 (84.98%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MA+  GESTS+P ++ S+S N++N  ND GDFECNICFELAQDPI+TLCGHLFCWPCLYR
Sbjct: 1   MASGIGESTSLPPESSSFSGNNNNNANDAGDFECNICFELAQDPIVTLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTA-- 178
           WLHHHS   ECPVCKAL+QEEKLVPLYGRGK  +DPR   YPG+DIP RP+GQRP+TA  
Sbjct: 61  WLHHHSHSHECPVCKALIQEEKLVPLYGRGKTQTDPRSKSYPGVDIPRRPSGQRPETAPP 120

Query: 179 -PPPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGG--LIPSLFNIQFHGFPDATVY 238
            PPP AN+FANYGFG  GGF+PMA ARIGNFTL+TAFGG  L PSLFNIQFHGFPDATVY
Sbjct: 121 RPPPEANNFANYGFGLMGGFVPMATARIGNFTLSTAFGGLSLFPSLFNIQFHGFPDATVY 180

Query: 239 GTTSGYPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           GTTSG P+ F+ FHGGH H FPQP SRGQHADNVLKNL LL+GV V+LALLWW
Sbjct: 181 GTTSGLPHGFHAFHGGHAHGFPQPMSRGQHADNVLKNLLLLIGVLVVLALLWW 233

[Close]
BLAST of CmoCh03G010320 vs. TrEMBL
Match: A0A061DGI8_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_000464 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.5e-101
Identity = 177/229 (77.29%), Postives = 194/229 (84.72%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MAN FGESTS+P  +PS S +  N  ND GDFECNICFELAQDPI+TLCGHLFCWPCLYR
Sbjct: 1   MANGFGESTSIPPPSPSCSGS--NNANDAGDFECNICFELAQDPIVTLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 178
           WLHHHS CQECPVCKAL+QEEKLVPLYGRGK  +DPR   YPG++IPNRPAGQRP TAPP
Sbjct: 61  WLHHHSHCQECPVCKALIQEEKLVPLYGRGKNQTDPRSKSYPGMEIPNRPAGQRPATAPP 120

Query: 179 PA-ANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 238
           PA  N FANYGFG  GGF+PMA ARIGNFT+   FGGL+PSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PAETNQFANYGFGLMGGFVPMATARIGNFTM--GFGGLLPSLFNIQFHGFPDATVYGTTS 180

Query: 239 GYPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           G+PY FN+FHG H   FPQP +RG  ADNVLKNL LL+GVFV+LALL+W
Sbjct: 181 GFPYGFNSFHGRHAQGFPQPTTRGHQADNVLKNLLLLIGVFVVLALLYW 225

[Close]
BLAST of CmoCh03G010320 vs. TAIR10
Match: AT2G23780.1 (AT2G23780.1 RING/U-box superfamily protein)

HSP 1 Score: 278.1 bits (710), Expect = 6.1e-75
Identity = 140/236 (59.32%), Postives = 171/236 (72.46%), Query Frame = 1 

Query: 64  GESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHH 123
           GES++    + S+S ++++TN+  GDFECNICFELAQDPI+TLCGHLFCWPCLYRWLHHH
Sbjct: 4   GESST----STSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHH 63

Query: 124 SQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPPP---- 183
           S  QECPVCKA+VQ++KLVPLYGRGK  +DPR  RYPG+ IPNRP GQRP+TA PP    
Sbjct: 64  SHSQECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRPTGQRPETAAPPPQPE 123

Query: 184 AANDFANYGFGFTGGFMP-MAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 243
           AA++F NYG G  GG MP MA  R GNF++   FGGL+PSLFN QFHGF DAT+YG+T G
Sbjct: 124 AASNFFNYGIGLMGGIMPMMATTRFGNFSM--GFGGLLPSLFNFQFHGFHDATLYGSTPG 183

Query: 244 YPYAFNTFHGGHGHHFPQPPSRGQ---------HADNVLKNLFLLVGVFVILALLW 286
           YPY      GG+ + F   P RGQ          +D  LKN+   VG+ V++ L+W
Sbjct: 184 YPY------GGYHNGFRGVPPRGQERPMARGGNQSDAFLKNILFFVGICVVIFLIW 227

[Close]
BLAST of CmoCh03G010320 vs. TAIR10
Match: AT1G19310.1 (AT1G19310.1 RING/U-box superfamily protein)

HSP 1 Score: 262.7 bits (670), Expect = 2.7e-70
Identity = 130/219 (59.36%), Postives = 166/219 (75.80%), Query Frame = 1 

Query: 74  PSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVCK 133
           PS SS +D  NND+ +FECNIC +LAQDPI+TLCGHLFCWPCLY+WLH HSQ ++CPVCK
Sbjct: 5   PSCSSGNDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCK 64

Query: 134 ALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPPPAAN-DFA-NYGF-G 193
           A+++E++LVPLYGRGK+ +DPR    PG+++PNRP+GQRP+TA PP  N  FA ++GF G
Sbjct: 65  AVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRPSGQRPETAQPPDPNHGFAHHHGFGG 124

Query: 194 FTGGF-MPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYG--TTSGYPYAF-NTF 253
           F GGF  PMA+AR GN TL+ AFGGLIPSLFN+ FHGFPDA +YG   + G+P+ F N F
Sbjct: 125 FMGGFAAPMASARFGNVTLSAAFGGLIPSLFNLHFHGFPDAAMYGAAASGGFPHGFSNPF 184

Query: 254 HGGHG--HHFPQPPSRGQHADNVLKNLFLLVGVFVILAL 284
           HGGH   H + +   R    D+ L+ L L+V V V+ +L
Sbjct: 185 HGGHSHMHSYQRHTGRQGQQDHHLRILLLIVFVVVVFSL 223

[Close]
BLAST of CmoCh03G010320 vs. TAIR10
Match: AT1G74990.1 (AT1G74990.1 RING/U-box superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 73/140 (52.14%), Postives = 89/140 (63.57%), Query Frame = 1 

Query: 73  NPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVC 132
           N   +   D +NN    F CNIC ELA++PI+TLCGHLFCWPCLY+WLH+HS+   CPVC
Sbjct: 4   NTITNEEDDASNN----FGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVC 63

Query: 133 KALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPPPAANDFANYGFGFT 192
           KALV+E+ LVPLYG GK  SDPR     G+ +PNRPA  R +TA P    +  ++G  F 
Sbjct: 64  KALVKEDTLVPLYGMGKPSSDPRSKLNSGVTVPNRPAATRTETARPRL--EQRHHGSSFF 123

Query: 193 GGFMPMAA----ARIGNFTL 209
           GG    AA     R  NF L
Sbjct: 124 GGHSSFAAMPTGLRFSNFLL 137

[Close]
BLAST of CmoCh03G010320 vs. TAIR10
Match: AT4G28270.1 (AT4G28270.1 RING membrane-anchor 2)

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-21
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 1 

Query: 88  GDFECNICFELAQDPIITLCGHLFCWPCLYRWLH-------------HHSQCQECPVCKA 147
           GDF+CNIC +  +DP++TLCGHLFCWPC+++W +             H  +  +CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 148 LVQEEKLVPLYGRG-KAPSDPRLNRYPGIDIPNRPAG 171
            V E  LVP+YGRG KAP         G ++P+RP G
Sbjct: 77  DVSEATLVPIYGRGQKAPQS-------GSNVPSRPTG 106

[Close]
BLAST of CmoCh03G010320 vs. TAIR10
Match: AT4G27470.1 (AT4G27470.1 RING membrane-anchor 3)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-20
Identity = 46/96 (47.92%), Postives = 58/96 (60.42%), Query Frame = 1 

Query: 85  NDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHH-------SQCQECPVCKALVQ 144
           N++G F+CNIC + A DP++TLCGHLFCWPC+Y+WLH              CPVCK+ + 
Sbjct: 37  NESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNIT 96

Query: 145 EEKLVPLYGRG-KAPSD---PRLNRYPGIDIPNRPA 170
              LVPLYGRG  +PS     +       DIP RPA
Sbjct: 97  ITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPA 132

[Close]
BLAST of CmoCh03G010320 vs. NCBI nr
Match: gi|659079254|ref|XP_008440158.1| (PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo])

HSP 1 Score: 467.2 bits (1201), Expect = 2.0e-128
Identity = 215/228 (94.30%), Postives = 221/228 (96.93%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MANEFGESTS+PH+NPS S+NSD TNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 178
           WLHHHSQCQECPVCKAL+QEEKLVPLYGRGK PSDPRLNRYPGIDIPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAPP 120

Query: 179 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 238
           P  NDFANYGFGFTGGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 239 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           YPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 YPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]
BLAST of CmoCh03G010320 vs. NCBI nr
Match: gi|449448400|ref|XP_004141954.1| (PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 7.9e-125
Identity = 211/229 (92.14%), Postives = 218/229 (95.20%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 118
           MANEFGESTS+PHQNPS S+NSD TNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 119 RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAP 178
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGK PSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120

Query: 179 PPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 238
           PP  N+F NYGFGF GGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 239 GYPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           GYPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229

[Close]
BLAST of CmoCh03G010320 vs. NCBI nr
Match: gi|703109658|ref|XP_010099355.1| (RING finger protein 5 [Morus notabilis])

HSP 1 Score: 389.8 bits (1000), Expect = 4.1e-105
Identity = 183/228 (80.26%), Postives = 196/228 (85.96%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MA+ FGESTSVP Q+PS S N  N   D GDFECNICFELAQDPI+TLCGHLFCWPCLYR
Sbjct: 1   MASGFGESTSVPPQSPSCSGNGVN---DAGDFECNICFELAQDPIVTLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 178
           WLHHHS  QECPVCKAL+QEEKLVPLYGRGK  SDPR   YPGI+IP+RP GQRPQTAPP
Sbjct: 61  WLHHHSHSQECPVCKALIQEEKLVPLYGRGKTQSDPRSKSYPGIEIPHRPTGQRPQTAPP 120

Query: 179 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 238
           P  N F NYGFGF GGF+PMA ARIGNFTL+TAFGGLIPSLFNIQFHGFPDATVYGTTSG
Sbjct: 121 PEPNQFTNYGFGFMGGFVPMATARIGNFTLSTAFGGLIPSLFNIQFHGFPDATVYGTTSG 180

Query: 239 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           +PY F++FHGGH H FPQP SRG  ADNVLKNL L++GVFVILALL W
Sbjct: 181 FPYGFHSFHGGHAHGFPQPSSRGHQADNVLKNLLLVIGVFVILALLCW 225

[Close]
BLAST of CmoCh03G010320 vs. NCBI nr
Match: gi|645272904|ref|XP_008241618.1| (PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Prunus mume])

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-103
Identity = 181/228 (79.39%), Postives = 196/228 (85.96%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MA+ FGESTSVP Q+PS S N+ N   + GDFECNICF+LAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MASGFGESTSVPPQSPSCSGNNAN---EVGDFECNICFDLAQDPIITLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 178
           WLHHHS  QECPVCKALVQEEKLVPLYGRGK  +DPR   YPGI+IPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSHSQECPVCKALVQEEKLVPLYGRGKMQTDPRSKSYPGINIPNRPAGQRPQTAPP 120

Query: 179 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 238
           P  N F NYGFGF GGF+PMA ARIGNFTLATAFGGLIPSL NI +HGFPDATVYGTTSG
Sbjct: 121 PETNQFTNYGFGFMGGFVPMATARIGNFTLATAFGGLIPSLLNIHYHGFPDATVYGTTSG 180

Query: 239 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           +PY F++FHGGH H FPQP S+ Q  DNVLKNLFLL+GVFVILAL+ W
Sbjct: 181 FPYGFSSFHGGHAHGFPQPASQRQQVDNVLKNLFLLIGVFVILALICW 225

[Close]
BLAST of CmoCh03G010320 vs. NCBI nr
Match: gi|595807028|ref|XP_007202536.1| (hypothetical protein PRUPE_ppa011052mg [Prunus persica])

HSP 1 Score: 383.6 bits (984), Expect = 2.9e-103
Identity = 181/228 (79.39%), Postives = 195/228 (85.53%), Query Frame = 1 

Query: 59  MANEFGESTSVPHQNPSWSSNSDNTNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYR 118
           MA+ FGESTSVP Q+PS S N+ N   D GDFECNICF+LAQDPIITLCGHLFCWPCLYR
Sbjct: 1   MASGFGESTSVPPQSPSCSGNNAN---DVGDFECNICFDLAQDPIITLCGHLFCWPCLYR 60

Query: 119 WLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAPP 178
           WLHHHS  QECPVCKALVQEEKLVPLYGRGK  +DPR   YPGI+IPNRPAGQRPQTAPP
Sbjct: 61  WLHHHSHSQECPVCKALVQEEKLVPLYGRGKTQTDPRSKSYPGINIPNRPAGQRPQTAPP 120

Query: 179 PAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSG 238
           P  N F NYG GF GGF+PMA ARIGNFTLATAFGGLIPSL NI +HGFPDATVYGTTSG
Sbjct: 121 PETNQFTNYGSGFMGGFVPMATARIGNFTLATAFGGLIPSLLNIHYHGFPDATVYGTTSG 180

Query: 239 YPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 287
           +PY F++FHGGH H FPQP S+ Q  DNVLKNLFLL+GVFVILAL+ W
Sbjct: 181 FPYGFSSFHGGHAHGFPQPASQRQQVDNVLKNLFLLIGVFVILALICW 225

The following BLAST results are available for this feature:
BLAST of CmoCh03G010320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNF5_CAEEL2.4e-2836.73RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1[more]
RN185_CHICK1.9e-2544.25E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus GN=RNF185 PE=2 SV=1[more]
RN185_MOUSE1.2e-2441.71E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2 SV=1[more]
RN185_PONAB1.6e-2440.98E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii GN=RNF185 PE=2 SV=1[more]
RN185_RAT2.1e-2441.90E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1[more]
BLAST of CmoCh03G010320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG01_CUCSA5.5e-12592.14Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487690 PE=4 SV=1[more]
W9RK94_9ROSA2.8e-10580.26RING finger protein 5 OS=Morus notabilis GN=L484_009172 PE=4 SV=1[more]
M5WAB1_PRUPE2.0e-10379.39Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011052mg PE=4 SV=1[more]
B9T4V2_RICCO5.9e-10376.39Rnf5, putative OS=Ricinus communis GN=RCOM_0411590 PE=4 SV=1[more]
A0A061DGI8_THECC5.5e-10177.29RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_000464 PE=4 SV=1[more]
BLAST of CmoCh03G010320 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23780.16.1e-7559.32 RING/U-box superfamily protein[more]
AT1G19310.12.7e-7059.36 RING/U-box superfamily protein[more]
AT1G74990.12.3e-3452.14 RING/U-box superfamily protein[more]
AT4G28270.16.6e-2145.36 RING membrane-anchor 2[more]
AT4G27470.11.9e-2047.92 RING membrane-anchor 3[more]
BLAST of CmoCh03G010320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659079254|ref|XP_008440158.1|2.0e-12894.30PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo][more]
gi|449448400|ref|XP_004141954.1|7.9e-12592.14PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis sativus][more]
gi|703109658|ref|XP_010099355.1|4.1e-10580.26RING finger protein 5 [Morus notabilis][more]
gi|645272904|ref|XP_008241618.1|1.3e-10379.39PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Prunus mume][more]
gi|595807028|ref|XP_007202536.1|2.9e-10379.39hypothetical protein PRUPE_ppa011052mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G010320.1CmoCh03G010320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 92..132
score: 9.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 92..133
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 75..145
score: 1.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 107..116
scor
NoneNo IPR availablePANTHERPTHR12313RNF5coord: 75..286
score: 1.4E
NoneNo IPR availablePANTHERPTHR12313:SF12RING ZINC FINGER PROTEIN-RELATEDcoord: 75..286
score: 1.4E
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 90..137
score: 3.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 88..145
score: 2.83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh03G010320Cucsa.101760Cucumber (Gy14) v1cgycmoB0227
CmoCh03G010320CmaCh03G010310Cucurbita maxima (Rimu)cmacmoB653
CmoCh03G010320CmaCh07G007520Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G010320Cla008510Watermelon (97103) v1cmowmB620
CmoCh03G010320Csa6G487690Cucumber (Chinese Long) v2cmocuB670
CmoCh03G010320MELO3C007493Melon (DHL92) v3.5.1cmomeB605
CmoCh03G010320ClCG01G016230Watermelon (Charleston Gray)cmowcgB575
CmoCh03G010320CSPI06G27390Wild cucumber (PI 183967)cmocpiB681
CmoCh03G010320Lsi01G010510Bottle gourd (USVL1VR-Ls)cmolsiB582
CmoCh03G010320Cp4.1LG10g02990Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G010320Cp4.1LG19g11770Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G010320MELO3C016706.2Melon (DHL92) v3.6.1cmomedB683
CmoCh03G010320MELO3C007493.2Melon (DHL92) v3.6.1cmomedB694
CmoCh03G010320CsaV3_6G042520Cucumber (Chinese Long) v3cmocucB0793
CmoCh03G010320Cla97C01G015230Watermelon (97103) v2cmowmbB642
CmoCh03G010320Bhi03G001524Wax gourdcmowgoB0785
CmoCh03G010320CsGy6G026740Cucumber (Gy14) v2cgybcmoB811
CmoCh03G010320CsGy4G021890Cucumber (Gy14) v2cgybcmoB510
CmoCh03G010320Carg05261Silver-seed gourdcarcmoB1095
CmoCh03G010320Carg00889Silver-seed gourdcarcmoB0551
CmoCh03G010320Carg11823Silver-seed gourdcarcmoB0262
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh03G010320CmoCh07G007750Cucurbita moschata (Rifu)cmocmoB455
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G010320Wild cucumber (PI 183967)cmocpiB653
CmoCh03G010320Cucumber (Chinese Long) v2cmocuB641
CmoCh03G010320Melon (DHL92) v3.5.1cmomeB579
CmoCh03G010320Melon (DHL92) v3.6.1cmomedB663