CmoCh03G010170 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G010170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMitochondrial transcription termination factor family protein
LocationCmo_Chr03 : 7620795 .. 7625139 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCAGAGAGGGTATGGCACAAAAAATGTAGTTCAGAAGCGAAGAGTAAGAAGACAAAAATGAATTAAGAAGAAGTCGCAATAGAAGGATTGAAGATACAAAGAAATCAGAGGAGACAGAGAGAGAAGATGAACCAGGAAAATCCAAATTCGGTGGGGATGAGAGAGCGCACTGTTTGGTTGAGAGGAAAAAGAAAAAGCTATTGGAAATGTGTGAGAGAGAGAGGGGGGAAAGAATAACCAGCAGCCGGGTGTTGGAGGCGGAATCTTTTGTGTAGTAATAATAAATAAATAAAAATTCTATATTTATATTGTAAAAGAAAAAACTATTGATTTAATTTTATATTGGTTCTCTCCTATTTTTATCCTTTCAACTTTTATCCATTTTGCTCAAAATATTTATTTTTGTCGTTTTTTTTTTATCTTTGTCCCTGTATTTGTCATTTTAGACTATATATGTATATATATTTCAATTTTTTTTTTATTTCTATCCATTAAATTCTCAAAATTAATGTGTATCTCTTTGAAATCTAAATTTTTTGTAAGTTATAATTTCGTTGTAAAATTAAATTAATGGGAATTTTTCTTTCTGCTTGGGTGATATTTTTTTAAAGAAAATATTAATTTTATCTTAGTGAATTTGAACGGATTTTATATAAAAATTTACAAATAAATAGATTAAATTTAATTAATACAATATTGACATTTTAAGTATAAATTGATGTTTTTTTTAAAAAAAAAAAATCTCTTTTAGGTTTATAAAAAAACATAAAATTGAGCAATAAATAAATAGATGTCTTAATTGTTGACTTGGCTTGAATTTTTAAGTTTATTTTCTTATTGATAATTTCAACTCAACATCCCATTAATTAATTTTCTTAAAAAATATGTCAACTTGAAAAATAATTAAGAAAATAAATCCTCCACTAAAATAATAAAATACAAAAAAAGTCTTTACAAATTTTATAGTCAATTTTGTTTGGATAATATAAAAACCAAAATTAACCAAAAGAAAAAAAAAAAAAAAAAGGTCCAAAGAAACCTTTTAAAATTACCAAACTCAAAATAAATAGAATAAATTAGAAAGTTAAATATATAATTTAAAATGTTAAAAATTTAGGGTTTTTGGGTTGGGGGAGGAAAAGGGAAAAATGGAGGGCGAGTGGGCCCAGTTGGCCCAACAGTGCTTTTGTCTTTCTACGTTGTGTTGTTGATATCAAATACGAAGAGTCACCAATTCTGTCCTTTTCTTTGGTCCTCACTGCCTTACTTTCTTTTTTCTTTTAAATAAAAAATTATTATTTTCATCACTTGGATTCTCTCTCCACGGCTATGTTCCTATCTTTTTAATTTTATAAAACAAATTTGAAACGGAAATGTGATAATATTTTACAAATTTTAAAAAAATGAAATGAAAATTTTGTTAAATACAATTAAAATTCACTAATTCAATCATATATTATTTATTAAAAAAATTAAGATACTTCAATCTTCTTATTTGTCAACTCAAAATTCTTCAACAAAATTGTGGCATAAAAAGCATTGATGAGGGAAAAATAAATTTCAAACAAAATTAGTTGAATAAAACGTCATTCATATCTCAATTTCAAAAGTAATGTAGACAATTTTTTAAGGTTGCTAGCTAAATTGTAGTCTAGCGAAAATAGACGTAAAATAATATTTTATTATGATCACAATCATTTACATTTATGTGTACGATAAATTAAAGAAAGATTCAATCAACTTAAATTTTTTTTTAGATGGTTTCAAGCGAACATATGTAAATTCATAATATGAAGGACGGGCTTTAGGAAAAAAAATTCATAAATGAAATGATAAAAACTTAAGGGTATTCGATTGAAAGGAGGAAGACGACAACATATATTGTTCACGAATGTCATGTATTTTTTTTTCATGGGTAAATTTAAATTTGGAATGATTTTTTTAATAGTAATTAAAAAATTCATTAAAAAAAATTAGTAAATAAAAAAGCACAATTTTTAAAAAAATATTCCATTGAAATTAATCACCAAATCTTTTGATTATGTAGTTGGAAAAGAAAACATATATTATTATTAATATAATCATTTTTAATAAGTAAAAAAAAAAAAGGTTATTTAGAGTAACGGACGATATTATAAACGGATCCCTAATTATTGTTATTTGGACGAAGGGCATTTTGCCAAAAGGTCGCATCTTTGATCTTGTTGGGGATTTCTCAAATCTCGTTTTCCTGCATCAGTCCACTCTGGTTCAGCTGCAATCCACTGGTATCTCTCTATTAGGGATTCCTTCGTTGCTTTCAGTCGCTCGTGACCTCTCTCGATTTCACCTCTCTCAGCTTCGTTCTCAAGGTTTTTCCCTTTTTCTTTCTAGTTATGATTTTGTTGTTTGTGGCTGCTCTTCGCGTTCTTTTGGCTAGAGATAGATTTTTTATTTTGGGCCTTGTGATTATCCGACTGCTGGCTGCTCTATATTCTTAGGTTTCTGTTTTCCACTACGTAATGCAATTCGGCAGTCTAATTCTTGGTTCATATGTTCAATCAAAATGTTGAAGTTTCGAATTCGTAATCCGAACAGAAAACTTCTTGTGAAGGGGAAACACCAAAAGGGCAGGAAGTTTCTTGTGAAGGGTTCAATAAGTTGTTGAGTGTGTATGTTCTTTTCCCCAGTTAGGCTTCTAGCACACTATACGATCAATCGACATAGAAATAAAAAAATCGGGGCAATGTAAATCTTCTTCGTCTTATTCCAATTTTGTGGTATGTGCCGGAAGGGAAACCTAAATCCGCTTTCATTTGGTGGAAGTAGAAAAAACCAAATGGTGTAAAAGGGTTAAGTATTTGGACGATTTGAAATAGGTTACATTTTTAGTAATTAGGTTGCACGTTGCTCGATGAAAAATCTGCTACAGAAGGCGATGAACTCACGAACACACACATGCACACTTATTCTCTCTCTGTATTCTTTTATGAAACTTCATTTTAAGATTGTGTGGGGTGATTAATGGGTGAAGATTTATGTAAACATTACTTGTTATATTTTGTGATTTTACTTAATGGGGAAGAATCAAATGCCCCATCATGGTTAATTTAGGCTGATCTTTTTGTTTTTGCTTGTATTATCTGATAAATCCAGTGTCAGTGATTCAGAACTCCATTTATCCCAGATCTAGGCATCGGTAACAACCCCATTCTAGTAGACAAGTTGATATGAAATCCAGAGCTGTGGGTTGTTTCAAGCTCTGCTATTTACTTTCTTCTAGGCAAGCATTTGCTTCCATTTTGGTAAACCAAAAATTAAAGGTTGCCTCTTGTTCAACTGTAAGTGCCAAGCAAGTTGAAGAGAAGGTGGGAGAAAGGCCGTTGGCACATGCCAATGACTCTACCGAAGTTTTCCGGAGATGGGGTTGTGCTGATGATGATATTGCACAAATCTTTGCACGTCGACCTTCTCTGCGCAGGAGTGACTTAAACCTACTACAAGATAAACTCCAACTGCTACAAGGTGTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGCCATCCTCGGTTCCTCAAAGGTCGGATCAACAACAACTTCCATGAGCGGATCGAGTTCTTCTTGAAAATGTTTGAATCTAAGGAAGCTCTTATCAAAGCCATTGTAAAAAACCCTTTACTTTTGACTTATGATTTCCATAATAAAATCAAGCCTGCAATTTCCCAGTATGAAGAATTGGGTCTCAGTAGAAAGGATTTGATTCTCATGCTTTTATCTCGCCCCACACTGATCCCAAGATCTTCATTTAATGATGAGAAGATGGGATACATACAAAAAACAGGGCTCACACATGGTGACAAGATGTACAAATACATTGTTACAATCATTGGTATCTCACGACTTGAAACCATCCGTCAAAAAGTAGCCCATTTGGAGAAGTTTGGTTTCACAGAAGATGAGACATTCACTCTTCTTGGACGATCTCCCCTTATCTTAACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATTTTGTGCACGTTGAAGCTGCCTGCTAAGAGTATTCTTAACTACCCATTTCTATTATACTTAAACCTTGAAGCAGTCTTGAAGCCACGGGTACTTCTCTCAGGGAAGATGGAGGAAATGGGTCTCGATATTCAGATCAAAGGCGGTTTGATGCTCAGGGCTCTTAGGATGACAGAGAAGAGGTTCTTGGAGAGTTTTGTTAACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAGTTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGAAACCTCAAGGAAGAGCCATCGCAGGGGCTTTCCTTTCTGA

mRNA sequence

ATGATGCAGAGAGGGTATGGCACAAAAAATGTAGTTCAGAAGCGAAGAGGCATTTTGCCAAAAGGTCGCATCTTTGATCTTGTTGGGGATTTCTCAAATCTCGTTTTCCTGCATCAGTCCACTCTGGTTCAGCTGCAATCCACTGGTATCTCTCTATTAGGGATTCCTTCGTTGCTTTCAGTCGCTCGTGACCTCTCTCGATTTCACCTCTCTCAGCTTCGTTCTCAAGTGTCAGTGATTCAGAACTCCATTTATCCCAGATCTAGGCATCGGCAAGCATTTGCTTCCATTTTGGTAAACCAAAAATTAAAGGTTGCCTCTTGTTCAACTGTAAGTGCCAAGCAAGTTGAAGAGAAGGTGGGAGAAAGGCCGTTGGCACATGCCAATGACTCTACCGAAGTTTTCCGGAGATGGGGTTGTGCTGATGATGATATTGCACAAATCTTTGCACGTCGACCTTCTCTGCGCAGGAGTGACTTAAACCTACTACAAGATAAACTCCAACTGCTACAAGGTGTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGCCATCCTCGGTTCCTCAAAGGTCGGATCAACAACAACTTCCATGAGCGGATCGAGTTCTTCTTGAAAATGTTTGAATCTAAGGAAGCTCTTATCAAAGCCATTGTAAAAAACCCTTTACTTTTGACTTATGATTTCCATAATAAAATCAAGCCTGCAATTTCCCAGTATGAAGAATTGGGTCTCAGTAGAAAGGATTTGATTCTCATGCTTTTATCTCGCCCCACACTGATCCCAAGATCTTCATTTAATGATGAGAAGATGGGATACATACAAAAAACAGGGCTCACACATGGTGACAAGATGTACAAATACATTGTTACAATCATTGGTATCTCACGACTTGAAACCATCCGTCAAAAAGTAGCCCATTTGGAGAAGTTTGGTTTCACAGAAGATGAGACATTCACTCTTCTTGGACGATCTCCCCTTATCTTAACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATTTTGTGCACGTTGAAGCTGCCTGCTAAGAGTATTCTTAACTACCCATTTCTATTATACTTAAACCTTGAAGCAGTCTTGAAGCCACGGGTACTTCTCTCAGGGAAGATGGAGGAAATGGGTCTCGATATTCAGATCAAAGGCGGTTTGATGCTCAGGGCTCTTAGGATGACAGAGAAGAGGTTCTTGGAGAGTTTTGTTAACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAGTTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGAAACCTCAAGGAAGAGCCATCGCAGGGGCTTTCCTTTCTGA

Coding sequence (CDS)

ATGATGCAGAGAGGGTATGGCACAAAAAATGTAGTTCAGAAGCGAAGAGGCATTTTGCCAAAAGGTCGCATCTTTGATCTTGTTGGGGATTTCTCAAATCTCGTTTTCCTGCATCAGTCCACTCTGGTTCAGCTGCAATCCACTGGTATCTCTCTATTAGGGATTCCTTCGTTGCTTTCAGTCGCTCGTGACCTCTCTCGATTTCACCTCTCTCAGCTTCGTTCTCAAGTGTCAGTGATTCAGAACTCCATTTATCCCAGATCTAGGCATCGGCAAGCATTTGCTTCCATTTTGGTAAACCAAAAATTAAAGGTTGCCTCTTGTTCAACTGTAAGTGCCAAGCAAGTTGAAGAGAAGGTGGGAGAAAGGCCGTTGGCACATGCCAATGACTCTACCGAAGTTTTCCGGAGATGGGGTTGTGCTGATGATGATATTGCACAAATCTTTGCACGTCGACCTTCTCTGCGCAGGAGTGACTTAAACCTACTACAAGATAAACTCCAACTGCTACAAGGTGTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGCCATCCTCGGTTCCTCAAAGGTCGGATCAACAACAACTTCCATGAGCGGATCGAGTTCTTCTTGAAAATGTTTGAATCTAAGGAAGCTCTTATCAAAGCCATTGTAAAAAACCCTTTACTTTTGACTTATGATTTCCATAATAAAATCAAGCCTGCAATTTCCCAGTATGAAGAATTGGGTCTCAGTAGAAAGGATTTGATTCTCATGCTTTTATCTCGCCCCACACTGATCCCAAGATCTTCATTTAATGATGAGAAGATGGGATACATACAAAAAACAGGGCTCACACATGGTGACAAGATGTACAAATACATTGTTACAATCATTGGTATCTCACGACTTGAAACCATCCGTCAAAAAGTAGCCCATTTGGAGAAGTTTGGTTTCACAGAAGATGAGACATTCACTCTTCTTGGACGATCTCCCCTTATCTTAACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATTTTGTGCACGTTGAAGCTGCCTGCTAAGAGTATTCTTAACTACCCATTTCTATTATACTTAAACCTTGAAGCAGTCTTGAAGCCACGGGTACTTCTCTCAGGGAAGATGGAGGAAATGGGTCTCGATATTCAGATCAAAGGCGGTTTGATGCTCAGGGCTCTTAGGATGACAGAGAAGAGGTTCTTGGAGAGTTTTGTTAACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAGTTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGAAACCTCAAGGAAGAGCCATCGCAGGGGCTTTCCTTTCTGA
Homology
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BLAST of CmoCh03G010170 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-07
Identity = 39/218 (17.89%), Postives = 100/218 (45.87%), Query Frame = 1 

Query: 162 LLQDKLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIV 221
           +++ K+  L+  G+++ ++ +++   P  +   I   +   +++F  +   KE + + +V
Sbjct: 351 VMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILV 410

Query: 222 KNPLLLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEK---MGYIQK 281
             P+L   D    I P +   +E+G+  + +  ML+  P+L+  S +   +   +  + +
Sbjct: 411 VKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTR 470

Query: 282 TGLTHGD--KMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVD 341
            G+T  D  K+      ++G S    +   + +    G    +   ++   P++L  +VD
Sbjct: 471 AGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD 530

Query: 342 KVQRNMTFILCTLKLPAKSILNYPFLLYLNLEAVLKPR 375
            ++    ++  T+  P + ++ +P     +LE  + PR
Sbjct: 531 NLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPR 568

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BLAST of CmoCh03G010170 vs. TrEMBL
Match: M5WH69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007097mg PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 5.2e-122
Identity = 228/345 (66.09%), Postives = 280/345 (81.16%), Query Frame = 1 

Query: 106 ASCSTVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQD 165
           A+ ST+   Q EE VGE        S E+ + WGC+D DI+++F RRP+LR +DL+ LQ 
Sbjct: 39  ATYSTICQAQ-EESVGEYVRDQPKSSEEILKNWGCSDTDISKMFTRRPALRNADLDQLQF 98

Query: 166 KLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPL 225
           KL +L G+GI++ +LVKIINC PRFL  RIN+ F ER+E+F+++FES+E L+KAIVKNP 
Sbjct: 99  KLNILSGLGISASELVKIINCRPRFLSYRINHCFDERLEYFMRLFESREVLVKAIVKNPS 158

Query: 226 LLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGD 285
           LLTYDFH+KIKPAI+ YE +GLS  DL  +LLSRPTLIPR+SFNDEKM YI+KT L++  
Sbjct: 159 LLTYDFHDKIKPAIALYEGMGLSTSDLTQILLSRPTLIPRTSFNDEKMEYIRKTRLSNHS 218

Query: 286 KMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFI 345
            MYKY+V IIGISRLETIRQKVA+LEKFGF+EDE F LL RSPL+LTLS+DKVQRNMTFI
Sbjct: 219 TMYKYVVAIIGISRLETIRQKVANLEKFGFSEDEIFGLLARSPLVLTLSIDKVQRNMTFI 278

Query: 346 LCTLKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKR 405
           +  +KLPA  IL YPF LY NLEAVLKPRV L+ KM+EM LD+QIKG +ML ALRMTEKR
Sbjct: 279 IGKMKLPAPVILEYPFFLYTNLEAVLKPRVFLAEKMQEMDLDLQIKGPVMLTALRMTEKR 338

Query: 406 FLESFVNSQPKDVADELMQFYQSAKGIKRLAET-SRKSHRRGFPF 450
           FL++FVN  PKDVADELM+FY +AKG+KRLAE  S+K+ ++GFPF
Sbjct: 339 FLKAFVNCHPKDVADELMEFYINAKGVKRLAEDYSKKNFQQGFPF 382

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BLAST of CmoCh03G010170 vs. TrEMBL
Match: A0A067JM67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22616 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.6e-115
Identity = 214/345 (62.03%), Postives = 273/345 (79.13%), Query Frame = 1 

Query: 106 ASCSTVSAKQVEEKV-GERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQ 165
           AS ST+   QVE  + GE     A +S EV R+WGC+++D+++I  RRPSLR+SD   LQ
Sbjct: 42  ASYSTIGLNQVENVLEGEE---RAEESVEVLRKWGCSENDLSKILTRRPSLRKSDPTHLQ 101

Query: 166 DKLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNP 225
            KL LLQ +GITS DLVKIINC PRFL  RIN  F ER+E+F+ +F S+E L+KAI++NP
Sbjct: 102 SKLSLLQDLGITSADLVKIINCRPRFLSCRINRFFEERLEYFMTLFGSREVLLKAIIRNP 161

Query: 226 LLLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHG 285
            LLTYDFHN IKPAI+ YE +G+S+KDLI MLLSRPTLIPR++F+DEKM  IQK G+   
Sbjct: 162 SLLTYDFHNSIKPAIALYEGIGVSKKDLIPMLLSRPTLIPRTTFDDEKMECIQKAGIPKN 221

Query: 286 DKMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTF 345
            KMYKYIVT++G+SR+ETIR+KVA+ EK+G +++E ++L GRSP +LTLSVDKVQRNMTF
Sbjct: 222 SKMYKYIVTLVGVSRIETIRKKVANFEKYGLSDEEIWSLFGRSPYLLTLSVDKVQRNMTF 281

Query: 346 ILCTLKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEK 405
           I+ T+KLPAK ++ YP+LL  NLE VLKPR  L+GK++++ L  QIKG LMLRALRM E+
Sbjct: 282 IMGTMKLPAKMVIEYPYLLLCNLEIVLKPRWFLAGKLQDLNLCPQIKGPLMLRALRMKER 341

Query: 406 RFLESFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 450
           RFL+ FV   PKDVA+ELM+FY+  KG+KRLAE S+KS  +GFPF
Sbjct: 342 RFLKVFVWCHPKDVAEELMEFYKMTKGVKRLAEASKKSLHQGFPF 383

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BLAST of CmoCh03G010170 vs. TrEMBL
Match: B9RI01_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1574760 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 3.1e-114
Identity = 211/346 (60.98%), Postives = 273/346 (78.90%), Query Frame = 1 

Query: 104 KVASCSTVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLL 163
           K A+ ST+   QVE    E  L    DS  V R+WGC+D D+ +I +RRPSLR +DL  L
Sbjct: 40  KPATYSTLCHAQVENDT-EGGLEQPKDSIGVLRKWGCSDRDLLKILSRRPSLRNADLTHL 99

Query: 164 QDKLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKN 223
           Q KL LLQG+GI   DLVKIINC PRFL  RIN+ F ER+++F+ +F SKE L+KAIV+N
Sbjct: 100 QSKLNLLQGLGIKPADLVKIINCRPRFLSSRINHCFDERLQYFMTLFGSKEVLLKAIVRN 159

Query: 224 PLLLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTH 283
           P LLTYDFHN IKPAI+ YE +G+S+ DLI MLLSRPT+IPR+SF+D+K+ YI++TG+ +
Sbjct: 160 PSLLTYDFHNCIKPAIALYERMGVSKNDLIPMLLSRPTVIPRTSFDDQKIEYIRRTGVPN 219

Query: 284 GDKMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMT 343
             KMYKY+VTIIGIS++ETIR+KVA+ EKFGF+++E +   GRSPL LTLSVDKVQRNMT
Sbjct: 220 TSKMYKYVVTIIGISKIETIREKVANFEKFGFSDEEVWRFFGRSPLFLTLSVDKVQRNMT 279

Query: 344 FILCTLKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTE 403
           F++ T+KLPA  +L YP+LLY NL+ VLKPR+LL+GK+++M L  QIKG L++RA+RMTE
Sbjct: 280 FVVGTMKLPANVVLQYPYLLYNNLDGVLKPRMLLAGKIQDMNLCPQIKGPLLMRAMRMTE 339

Query: 404 KRFLESFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 450
           +RFL++FV+  P DVA+ELM FY+ AK  KRLAE+S+K   +GFPF
Sbjct: 340 QRFLKAFVSCHPTDVAEELMVFYEKAKCCKRLAESSKKMITKGFPF 384

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BLAST of CmoCh03G010170 vs. TrEMBL
Match: A0A0D2R0G9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G042200 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.7e-112
Identity = 203/341 (59.53%), Postives = 267/341 (78.30%), Query Frame = 1 

Query: 109 STVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQDKLQ 168
           ST+   QVE    E  + H  DS E+F++WGC ++D+ +IF+R+PSLR +    L  KL 
Sbjct: 33  STICPNQVESP-NEEAIEHPRDSIEIFKQWGCCENDLLKIFSRQPSLRNAQATSLLSKLN 92

Query: 169 LLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPLLLT 228
           LL  +G++  D+VK++NC PRF   RINN F ERIEF + +F S+E L KA+V+NP LLT
Sbjct: 93  LLSSLGLSGSDIVKMVNCRPRFFCSRINNCFDERIEFLINLFGSREMLRKALVRNPSLLT 152

Query: 229 YDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMY 288
           YDFHN +KP I+ YEE+G+S  DLI ML+SRPTLIPR+SFN+EKM YI+KT ++ G KMY
Sbjct: 153 YDFHNTMKPVIALYEEIGISGSDLIAMLISRPTLIPRTSFNEEKMEYIKKTRVSKGSKMY 212

Query: 289 KYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCT 348
           KY+V++IGISR+ETIR+KV +LEKFG +E+E ++LLGRSPLILTLSVDKVQRNMTF+L T
Sbjct: 213 KYVVSLIGISRIETIREKVTNLEKFGCSEEEIWSLLGRSPLILTLSVDKVQRNMTFVLGT 272

Query: 349 LKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKRFLE 408
           +KL  + +L +PFLL+ NLEAVLKPR+ L+ K++EM LD QIKG +ML ALRMTE RFL 
Sbjct: 273 MKLSPRVVLEHPFLLFSNLEAVLKPRISLARKLKEMELDPQIKGSIMLTALRMTENRFLN 332

Query: 409 SFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 450
            F+   P+DVA+EL++FY+ AKG+K LAE+S+K  R+GFPF
Sbjct: 333 VFIKCHPQDVANELLEFYKHAKGLKPLAESSKKILRKGFPF 372

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BLAST of CmoCh03G010170 vs. TrEMBL
Match: A0A061GHZ3_THECC (Mitochondrial transcription termination factor family protein OS=Theobroma cacao GN=TCM_030288 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.9e-112
Identity = 205/344 (59.59%), Postives = 269/344 (78.20%), Query Frame = 1 

Query: 106 ASCSTVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQD 165
           A+ ST+   Q E    E  +    DS E+FR+WGC+++D+ QIF+R+P+LR + +  L  
Sbjct: 32  ATYSTICQNQAENHT-EAAVEPPRDSAELFRKWGCSENDLGQIFSRQPALRHAQVAPLLS 91

Query: 166 KLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPL 225
           KL+LL  +G+T+ D+V +INC PRF   RIN+ F ER++FFL +F S+E L KA+V+NP 
Sbjct: 92  KLKLLSDLGLTASDIVTMINCRPRFFCSRINHCFDERLDFFLTLFGSREVLRKALVRNPS 151

Query: 226 LLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGD 285
           LLTYDFH  IKP I+ YEE+G++  DLI ML+SRPTLIPR+SFNDEKM YI+KTG++ G 
Sbjct: 152 LLTYDFHGTIKPVIALYEEMGIAGNDLIAMLISRPTLIPRTSFNDEKMEYIKKTGVSKGS 211

Query: 286 KMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFI 345
           KMYKY+V +IGISR+ETI++KV +LEKFG +EDE ++LLGRSPLILTLSVDKVQRNMTF+
Sbjct: 212 KMYKYVVALIGISRIETIQEKVTNLEKFGCSEDEVWSLLGRSPLILTLSVDKVQRNMTFV 271

Query: 346 LCTLKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKR 405
           + T+KL  K +L YPFLL+ NLEAVLKPRVLL+GK+++M L  QIKG +MLRALRM E R
Sbjct: 272 VGTMKLSPKLVLQYPFLLFCNLEAVLKPRVLLAGKLKDMELHPQIKGAMMLRALRMKESR 331

Query: 406 FLESFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 450
           FL +FV   P++VA EL++FY+ AK +KRLAE S+   R+GFPF
Sbjct: 332 FLSAFVTCHPENVATELLEFYKHAKCVKRLAEASKMKVRKGFPF 374

[Close]
BLAST of CmoCh03G010170 vs. TAIR10
Match: AT1G79220.1 (AT1G79220.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 345.5 bits (885), Expect = 4.9e-95
Identity = 188/401 (46.88%), Postives = 272/401 (67.83%), Query Frame = 1 

Query: 69  HLSQLRSQVSVIQNSIYPRSRHRQAFASILVNQKLKVASCSTVSAKQVEE---------- 128
           H +  R+ ++VI+      S  R+A    L++       CST+   + EE          
Sbjct: 2   HSTGKRNFLAVIRLLFTSSSLVRKAGCRNLISATF-TTRCSTLCLNESEECIEDSDLSSR 61

Query: 129 --------KVGERPLAHANDST--EVFRRWGCADDDIAQIFARRPSLRRSDLNLLQDKLQ 188
                   +VGE+       S+  +V RRWGC DD+I+++F RRP+L+R+++  L+ KL 
Sbjct: 62  RKKFDYVGEVGEKEKVRDITSSPLQVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLS 121

Query: 189 LLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPLLLT 248
           LL+ +GITS DLVKI+NC PRF   R+     ERI +F+++  SKE L + I++NP L+ 
Sbjct: 122 LLKPLGITSSDLVKILNCRPRFFSCRLV--LDERINYFMEILGSKEVLRRVIIRNPSLML 181

Query: 249 YDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMY 308
           YD  +KIKPAI  Y+ LG S++DL+ ML+SRPTLIPR++FN+EK  YI+KTG+T   KM+
Sbjct: 182 YDLDDKIKPAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMF 241

Query: 309 KYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCT 368
           KY+  IIG+SR+ETI +KV +LEKFGF+E+E + L G+ P++L+LSV+KVQRNMTF++ +
Sbjct: 242 KYVAVIIGVSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIAS 301

Query: 369 LKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKRFLE 428
           +KLPA S++ +P LL LNLE+ LKPR  L  ++ EM L   IK   + RA+RM+EKRFL+
Sbjct: 302 MKLPAHSVVKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLK 361

Query: 429 SFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 450
            +V   P+D+A ELM+FY+ +K +KRLAE S+K  R+GFPF
Sbjct: 362 VYVMCHPQDIATELMEFYEKSKNMKRLAEKSKKYIRKGFPF 399

[Close]
BLAST of CmoCh03G010170 vs. TAIR10
Match: AT1G61990.1 (AT1G61990.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-10
Identity = 60/274 (21.90%), Postives = 120/274 (43.80%), Query Frame = 1 

Query: 113 AKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLN-LLQDKLQLLQ 172
           A+ +  KV      + +    +FR +G  D  I+ I    P L  +D    L  KLQ+LQ
Sbjct: 69  AESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQ 128

Query: 173 GVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPLLLTYDF 232
             G +S ++ +I++  PR L  +    +++ +         K+ ++     +  L     
Sbjct: 129 SRGASSSEITEIVSTVPRILGKKSITVYYDAV---------KDIIVADTSSSYELPQGSQ 188

Query: 233 HNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYI 292
            NKI+  +S   ELG+  + L+ +L+S+   +      D  +  + + G       +   
Sbjct: 189 GNKIR-NVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLA 248

Query: 293 VTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLKL 352
           + ++     +TI +KV      GFT D+ + +  ++P +L +S  K+ ++    L     
Sbjct: 249 LRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYS 308

Query: 353 PAKSIL---NYPFLLYLNLEAVLKPRVLLSGKME 383
            A+ ++    YP  +  ++E+V K    L  KM+
Sbjct: 309 RAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMK 332

[Close]
BLAST of CmoCh03G010170 vs. TAIR10
Match: AT2G21710.1 (AT2G21710.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 59.3 bits (142), Expect = 7.0e-09
Identity = 39/218 (17.89%), Postives = 100/218 (45.87%), Query Frame = 1 

Query: 162 LLQDKLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIV 221
           +++ K+  L+  G+++ ++ +++   P  +   I   +   +++F  +   KE + + +V
Sbjct: 351 VMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILV 410

Query: 222 KNPLLLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEK---MGYIQK 281
             P+L   D    I P +   +E+G+  + +  ML+  P+L+  S +   +   +  + +
Sbjct: 411 VKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTR 470

Query: 282 TGLTHGD--KMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVD 341
            G+T  D  K+      ++G S    +   + +    G    +   ++   P++L  +VD
Sbjct: 471 AGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD 530

Query: 342 KVQRNMTFILCTLKLPAKSILNYPFLLYLNLEAVLKPR 375
            ++    ++  T+  P + ++ +P     +LE  + PR
Sbjct: 531 NLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPR 568

[Close]
BLAST of CmoCh03G010170 vs. TAIR10
Match: AT1G62110.1 (AT1G62110.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-08
Identity = 68/307 (22.15%), Postives = 129/307 (42.02%), Query Frame = 1 

Query: 35  VFLHQSTLVQLQSTGISLLGIPSLLSVARDLSRFHLSQLRSQVSVIQNSIYPRSRHRQAF 94
           V LH   LVQLQ           L  V ++ S F  S   +  + +       SR  +  
Sbjct: 4   VILHGRRLVQLQKWR-------HLRFVVQNGSAFSNSYSSASATDLS------SRDGRKV 63

Query: 95  ASILVNQKLKVASCSTVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPS 154
            +  V+  +     +T  A+ + +KV      + +    +FR +G  +  I+ I    P 
Sbjct: 64  KNFTVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPR 123

Query: 155 LRRSDLNLLQD-KLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESK 214
           L   D     D KLQ L+  G +SP+L +I++  P+ L  +   +     +F  ++ E+ 
Sbjct: 124 LLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEAD 183

Query: 215 EALIKAIVKNPLLLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKM 274
           ++     +  PL       NKI+  +S   +LG+ +K L  +L+S    +      +E +
Sbjct: 184 KSSKYETLCQPLPEANRQGNKIR-NVSVLRDLGVPQKLLFSLLISDAQPVCGKENFEESL 243

Query: 275 GYIQKTGLTHGDKMYKYIVTIIGISRL--ETIRQKVAHLEKFGFTEDETFTLLGRSPLIL 334
             + + G        K++  +  + R   +TI ++V   + FGF  ++ + +  + P  L
Sbjct: 244 KKVVEMGF--DPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFL 294

Query: 335 TLSVDKV 339
             S  K+
Sbjct: 304 NSSEKKI 294

[Close]
BLAST of CmoCh03G010170 vs. NCBI nr
Match: gi|645239439|ref|XP_008226127.1| (PREDICTED: uncharacterized protein LOC103325722 [Prunus mume])

HSP 1 Score: 451.4 bits (1160), Expect = 1.8e-123
Identity = 228/345 (66.09%), Postives = 283/345 (82.03%), Query Frame = 1 

Query: 106 ASCSTVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQD 165
           A+ ST+   Q EE VGE       +S E+ + WGC+D DI+++F RRP+LR +DL+ LQ 
Sbjct: 39  ATYSTICQAQ-EESVGEYVRDQPKNSEEILKNWGCSDTDISKMFTRRPALRNADLDQLQF 98

Query: 166 KLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPL 225
           KL +L G+GI++ +LVKIINC PRFL  RIN+ F ER+E+F+++FES+E L+KAIVKNP 
Sbjct: 99  KLNILSGLGISASELVKIINCRPRFLSNRINHCFDERLEYFMRLFESREVLVKAIVKNPS 158

Query: 226 LLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGD 285
           LLTYDFH+KIKPAI+ YE +GLS  DL  +LLSRPTLIPR+SFNDEKM YI+KT L++  
Sbjct: 159 LLTYDFHDKIKPAIALYEGMGLSTSDLTQLLLSRPTLIPRTSFNDEKMEYIRKTRLSNHS 218

Query: 286 KMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFI 345
            MYKY+V IIGISRLETIRQKVA+LEKFGF+EDE F LL RSPL+LTLS+DKVQRNMTFI
Sbjct: 219 TMYKYVVAIIGISRLETIRQKVANLEKFGFSEDEIFGLLARSPLVLTLSIDKVQRNMTFI 278

Query: 346 LCTLKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKR 405
           +  +KLPA  +L YPF LY NLEAVLKPRV L+ KM+EMGLD+QI+G +MLRALRMTEKR
Sbjct: 279 IGKMKLPAPVVLEYPFFLYTNLEAVLKPRVFLAEKMQEMGLDLQIEGPMMLRALRMTEKR 338

Query: 406 FLESFVNSQPKDVADELMQFYQSAKGIKRLAET-SRKSHRRGFPF 450
           FL++FVN  PKDVADELM+FY +AKG+KRLAE  S+K+ ++GFPF
Sbjct: 339 FLKAFVNCHPKDVADELMEFYINAKGVKRLAEDYSKKNFQQGFPF 382

[Close]
BLAST of CmoCh03G010170 vs. NCBI nr
Match: gi|659079328|ref|XP_008440198.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484733 [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 5.8e-122
Identity = 245/361 (67.87%), Postives = 286/361 (79.22%), Query Frame = 1 

Query: 91  RQAFASILVNQ------KLKVASCSTVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDD 150
           RQA  SILVNQ      KLKVA+CST+S K+VEE      LAHAND TEV RRWGC D+D
Sbjct: 18  RQACVSILVNQPLEDWQKLKVATCSTLSVKKVEEGT----LAHANDYTEVLRRWGCTDND 77

Query: 151 IAQIFARRPSLRRSDLNLLQDKLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIE 210
           IAQIFA   SL RS+ N LQ+ L LL G+GITSPDLVK+INC P FL+  INN FHERIE
Sbjct: 78  IAQIFAHGSSLHRSETNQLQNNLHLLXGLGITSPDLVKVINCRPWFLECPINN-FHERIE 137

Query: 211 FFLKMFESKEALIKAIVKNPLLLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIP 270
           FFL+MFESKE L+KAI+++P           KP +SQYEE+GLS+KDL+ MLL  PTLIP
Sbjct: 138 FFLQMFESKEVLVKAILRDPX----------KPVLSQYEEIGLSKKDLVCMLLLYPTLIP 197

Query: 271 RSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLL 330
           R+SFN+EKM +IQKTGL+ GDK++KY+VTII ISRLETIRQKVA+L+KFGFTEDE F L+
Sbjct: 198 RTSFNNEKMEFIQKTGLSQGDKLFKYVVTIICISRLETIRQKVANLKKFGFTEDEKFALI 257

Query: 331 GRSPLILTLSVDKVQRNMTFILCTLKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEM 390
            R PLILTLSVDKVQRNMTFIL +++LPAK +L+YPFLL  NLEAV   R+LL+GK+EEM
Sbjct: 258 RRCPLILTLSVDKVQRNMTFILYSMELPAKVVLHYPFLLRFNLEAV---RMLLAGKVEEM 317

Query: 391 GLDIQIKGGLMLRALRMTEKRFLESFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHR 446
           GL +QIKG  +L ALRM E RFL+ FV SQP+DVADELMQFYQ AK IK LAETSRK+  
Sbjct: 318 GLHLQIKGRSILSALRMPENRFLKKFVYSQPQDVADELMQFYQRAKAIKCLAETSRKNRN 360

[Close]
BLAST of CmoCh03G010170 vs. NCBI nr
Match: gi|595862584|ref|XP_007211427.1| (hypothetical protein PRUPE_ppa007097mg [Prunus persica])

HSP 1 Score: 446.0 bits (1146), Expect = 7.5e-122
Identity = 228/345 (66.09%), Postives = 280/345 (81.16%), Query Frame = 1 

Query: 106 ASCSTVSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQD 165
           A+ ST+   Q EE VGE        S E+ + WGC+D DI+++F RRP+LR +DL+ LQ 
Sbjct: 39  ATYSTICQAQ-EESVGEYVRDQPKSSEEILKNWGCSDTDISKMFTRRPALRNADLDQLQF 98

Query: 166 KLQLLQGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPL 225
           KL +L G+GI++ +LVKIINC PRFL  RIN+ F ER+E+F+++FES+E L+KAIVKNP 
Sbjct: 99  KLNILSGLGISASELVKIINCRPRFLSYRINHCFDERLEYFMRLFESREVLVKAIVKNPS 158

Query: 226 LLTYDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGD 285
           LLTYDFH+KIKPAI+ YE +GLS  DL  +LLSRPTLIPR+SFNDEKM YI+KT L++  
Sbjct: 159 LLTYDFHDKIKPAIALYEGMGLSTSDLTQILLSRPTLIPRTSFNDEKMEYIRKTRLSNHS 218

Query: 286 KMYKYIVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFI 345
            MYKY+V IIGISRLETIRQKVA+LEKFGF+EDE F LL RSPL+LTLS+DKVQRNMTFI
Sbjct: 219 TMYKYVVAIIGISRLETIRQKVANLEKFGFSEDEIFGLLARSPLVLTLSIDKVQRNMTFI 278

Query: 346 LCTLKLPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKR 405
           +  +KLPA  IL YPF LY NLEAVLKPRV L+ KM+EM LD+QIKG +ML ALRMTEKR
Sbjct: 279 IGKMKLPAPVILEYPFFLYTNLEAVLKPRVFLAEKMQEMDLDLQIKGPVMLTALRMTEKR 338

Query: 406 FLESFVNSQPKDVADELMQFYQSAKGIKRLAET-SRKSHRRGFPF 450
           FL++FVN  PKDVADELM+FY +AKG+KRLAE  S+K+ ++GFPF
Sbjct: 339 FLKAFVNCHPKDVADELMEFYINAKGVKRLAEDYSKKNFQQGFPF 382

[Close]
BLAST of CmoCh03G010170 vs. NCBI nr
Match: gi|1009129819|ref|XP_015881973.1| (PREDICTED: uncharacterized protein LOC107417838 [Ziziphus jujuba])

HSP 1 Score: 433.3 bits (1113), Expect = 5.1e-118
Identity = 221/372 (59.41%), Postives = 282/372 (75.81%), Query Frame = 1 

Query: 80  IQNSIYPRSRHRQAFASILVNQKLKVASCSTVSAKQV--EEKVGERPLAHANDSTEVFRR 139
           +++ ++P S H  +     V +   + + +T S   V  EE   E      +DSTE+ +R
Sbjct: 11  LRSVLFPVSSHLFSLPKYTVQRTYVIPTFTTCSTYCVTEEESPREEDGNQPSDSTEILKR 70

Query: 140 WGCADDDIAQIFARRPSLRRSDLNLLQDKLQLLQGVGITSPDLVKIINCHPRFLKGRINN 199
           WGC D+D++ IF RRPSLR +DLN LQ KL++L G+GI++PDLVKIINC PRFL  RIN 
Sbjct: 71  WGCNDNDLSMIFMRRPSLRNADLNSLQFKLKILSGLGISAPDLVKIINCRPRFLSCRINR 130

Query: 200 NFHERIEFFLKMFESKEALIKAIVKNPLLLTYDFHNKIKPAISQYEELGLSRKDLILMLL 259
              ER++FF+ +F SKE L+KA+V+NP L TYDFH  IKPAI+ YEE+GLSR DLI MLL
Sbjct: 131 CLDERLQFFMTIFGSKEVLVKALVRNPSLFTYDFHKTIKPAIALYEEMGLSRDDLITMLL 190

Query: 260 SRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKVAHLEKFGFTE 319
           SRPT+I R+SF DEKM YI+KT L+   KMYKY+VT+IGISR ETI +K+A+ EKFGF+E
Sbjct: 191 SRPTMIARTSFGDEKMEYIRKTKLSKDSKMYKYVVTLIGISRSETIGRKLANFEKFGFSE 250

Query: 320 DETFTLLGRSPLILTLSVDKVQRNMTFILCTLKLPAKSILNYPFLLYLNLEAVLKPRVLL 379
           DE F L GRSP +LTLSVDKVQRNMTFI+ T+KLPAK +L +PFLLY NLEA L+PR+LL
Sbjct: 251 DEVFGLFGRSPFVLTLSVDKVQRNMTFIIGTMKLPAKVVLEHPFLLYTNLEAGLRPRILL 310

Query: 380 SGKMEEMGLDIQIKGGLMLRALRMTEKRFLESFVNSQPKDVADELMQFYQSAKGIKRLAE 439
           + K++EMGLD+QIKG  +L+ALRM EKRFLE+F+   PK+VADELM  Y +AK +KRLA 
Sbjct: 311 AAKLQEMGLDLQIKGPELLKALRMKEKRFLEAFITCHPKEVADELMACYMNAKRVKRLAI 370

Query: 440 TSRKSHRRGFPF 450
            S+K+ R GFPF
Sbjct: 371 ESKKNSRDGFPF 382

[Close]
BLAST of CmoCh03G010170 vs. NCBI nr
Match: gi|694428242|ref|XP_009341702.1| (PREDICTED: uncharacterized protein LOC103933738 [Pyrus x bretschneideri])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 219/340 (64.41%), Postives = 268/340 (78.82%), Query Frame = 1 

Query: 111 VSAKQVEEKVGERPLAHANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQDKLQLL 170
           V  + VE  + ++P     +S EV R WGC+D DI+++F RRP LR +DLN LQ KL +L
Sbjct: 50  VQEESVEVDIRDQP----KNSAEVLRNWGCSDTDISKMFTRRPVLRSTDLNQLQSKLNVL 109

Query: 171 QGVGITSPDLVKIINCHPRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPLLLTYD 230
            G+GIT+P LVKIINC+PRFL  R N+   ER+EFF+++FES+E L+KAIV+NP LL YD
Sbjct: 110 SGLGITAPQLVKIINCYPRFLSYRFNHCIDERLEFFMRLFESREVLVKAIVRNPSLLIYD 169

Query: 231 FHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKY 290
            HNKIKP I  YE +GLS +DLI MLL R TLIPR+SFNDEKM YI+KT L+   +MYKY
Sbjct: 170 LHNKIKPVIKLYEGIGLSMEDLIQMLLQRATLIPRTSFNDEKMEYIRKTRLSTDSRMYKY 229

Query: 291 IVTIIGISRLETIRQKVAHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLK 350
           +VTIIGISRLET+ QK+++ EKFGF+EDE F LLG SPL+ TLSVDKVQRNMTFI+  +K
Sbjct: 230 VVTIIGISRLETLSQKISNFEKFGFSEDEIFGLLGSSPLVFTLSVDKVQRNMTFIIGKMK 289

Query: 351 LPAKSILNYPFLLYLNLEAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKRFLESF 410
            PAK IL  PFLLY NLEAVLKPRV L GK++EMGLD+QIKG  ML ALRMTEKRFL++F
Sbjct: 290 FPAKVILQNPFLLYSNLEAVLKPRVFLVGKIQEMGLDLQIKGPRMLTALRMTEKRFLKAF 349

Query: 411 VNSQPKDVADELMQFYQSAKGIKRLAET-SRKSHRRGFPF 450
           +N  PKDVADELM+FY +AK +KRLAE  S+K+  +GFPF
Sbjct: 350 INCHPKDVADELMEFYTNAKSVKRLAEDYSKKNFHQGFPF 385

The following BLAST results are available for this feature:
BLAST of CmoCh03G010170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF2_ARATH1.2e-0717.89Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of CmoCh03G010170 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WH69_PRUPE5.2e-12266.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007097mg PE=4 SV=1[more]
A0A067JM67_JATCU1.6e-11562.03Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22616 PE=4 SV=1[more]
B9RI01_RICCO3.1e-11460.98Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1574760 PE=4 SV=1[more]
A0A0D2R0G9_GOSRA1.7e-11259.53Uncharacterized protein OS=Gossypium raimondii GN=B456_002G042200 PE=4 SV=1[more]
A0A061GHZ3_THECC2.9e-11259.59Mitochondrial transcription termination factor family protein OS=Theobroma cacao... [more]
BLAST of CmoCh03G010170 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79220.14.9e-9546.88 Mitochondrial transcription termination factor family protein[more]
AT1G61990.13.7e-1021.90 Mitochondrial transcription termination factor family protein[more]
AT2G21710.17.0e-0917.89 Mitochondrial transcription termination factor family protein[more]
AT1G62110.12.7e-0822.15 Mitochondrial transcription termination factor family protein[more]
BLAST of CmoCh03G010170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|645239439|ref|XP_008226127.1|1.8e-12366.09PREDICTED: uncharacterized protein LOC103325722 [Prunus mume][more]
gi|659079328|ref|XP_008440198.1|5.8e-12267.87PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484733 [Cucumis me... [more]
gi|595862584|ref|XP_007211427.1|7.5e-12266.09hypothetical protein PRUPE_ppa007097mg [Prunus persica][more]
gi|1009129819|ref|XP_015881973.1|5.1e-11859.41PREDICTED: uncharacterized protein LOC107417838 [Ziziphus jujuba][more]
gi|694428242|ref|XP_009341702.1|1.1e-11764.41PREDICTED: uncharacterized protein LOC103933738 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR004111Tetracycline transcriptional regulator, TetR, C-terminal
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0045892negative regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G010170.1CmoCh03G010170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 191..406
score: 9.1E-30coord: 134..261
score: 1.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 181..213
score: 220.0coord: 353..387
score: 420.0coord: 146..176
score: 340.0coord: 321..352
score: 150.0coord: 285..316
score: 310.0coord: 217..248
score:
IPR004111Tetracycline transcriptional regulator, TetR, C-terminalPFAMPF02909TetR_Ccoord: 134..195
score: 2.
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 127..444
score: 2.6E
NoneNo IPR availablePANTHERPTHR13068:SF21MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 127..444
score: 2.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh03G010170Cucsa.102020Cucumber (Gy14) v1cgycmoB0227
CmoCh03G010170CmaCh03G010120Cucurbita maxima (Rimu)cmacmoB653
CmoCh03G010170Cla001805Watermelon (97103) v1cmowmB623
CmoCh03G010170Csa6G489920Cucumber (Chinese Long) v2cmocuB670
CmoCh03G010170MELO3C007519Melon (DHL92) v3.5.1cmomeB605
CmoCh03G010170CSPI06G27630Wild cucumber (PI 183967)cmocpiB681
CmoCh03G010170Lsi01G010220Bottle gourd (USVL1VR-Ls)cmolsiB582
CmoCh03G010170Cp4.1LG10g03020Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G010170MELO3C007519.2Melon (DHL92) v3.6.1cmomedB694
CmoCh03G010170CsaV3_6G042790Cucumber (Chinese Long) v3cmocucB0793
CmoCh03G010170Cla97C01G015480Watermelon (97103) v2cmowmbB642
CmoCh03G010170Bhi03G001490Wax gourdcmowgoB0785
CmoCh03G010170CsGy6G027100Cucumber (Gy14) v2cgybcmoB811
CmoCh03G010170Carg00870Silver-seed gourdcarcmoB0551
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G010170Melon (DHL92) v3.6.1cmomedB663
CmoCh03G010170Melon (DHL92) v3.6.1cmomedB683
CmoCh03G010170Silver-seed gourdcarcmoB0262
CmoCh03G010170Silver-seed gourdcarcmoB1095
CmoCh03G010170Cucurbita moschata (Rifu)cmocmoB455
CmoCh03G010170Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G010170Wild cucumber (PI 183967)cmocpiB653
CmoCh03G010170Cucumber (Chinese Long) v2cmocuB641
CmoCh03G010170Melon (DHL92) v3.5.1cmomeB579
CmoCh03G010170Watermelon (Charleston Gray)cmowcgB578
CmoCh03G010170Watermelon (Charleston Gray)cmowcgB575
CmoCh03G010170Watermelon (97103) v1cmowmB638
CmoCh03G010170Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G010170Cucumber (Gy14) v2cgybcmoB510