CmoCh03G009790 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G009790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Rer1 protein, putative
Location	Cmo_Chr03 : 7381662 .. 7384511 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATGCTAAAATATTGACTTGGGGAGTTGCGAAGGGGAAGCGCCAAGGATCGGTTTAAAAAGAAAAAAGATAGAGAAGGAAAAAGAGAAAAAAAATTGATCGAGGGGAATCAGCCCGCGAACGACGGCCAGTTCGTCAACCCACCTTACCTTGGCAAATGGCTGAAGGGAGATAATTACAGATACATAGGAACGGGGAAATCAAATCTCGAGTATATAAATTGGGCGACGACGGTTGCCGATACTTTTGGGTCCTAATGGAAAGTGAAGCGGCTGGCGTTGGTCTCGGCGGCGCGGAAGATGTCTATTCTACCACTCTCTTTTCACGGTGGAGCCATGGCGTTTCCCGGCGGTATCAACACCTTCTCGATAGGTGTACCCCCTACATCTTCTACCGTTGGATCGCCTGTTTTTTCGTCGCCTCTATCTATGTCCTTCGGGTTTACCTCATCGAAGGATTCTACATCGTCTCTTACGGTCTCGGAATTTACATCCTCAATCTTCTAATTGGGTTTCTCTCGCCCCAAGTGGATCCTGAGATCCTGGATCTCCATGACGGCCCTGCGCTTCCCCTCAGGGAATCCGATGAGTTCCGCCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGGTGCGTCCAGGTTTCCGATTCGTTGCATTTTTTTCCCTCCCATTTTCAATTTGAGCCATCGCAGTGTCTTTTGATTGAATACTCTCTGATATAAATGTGAACCATGCGATCGGGAATTTGTAGTGTAATTACGAACTGTCGTGGTTTGCTTAAGCTTTAGGAGATGGGTAACTGTTGGATTGGAGTCATGAGCTTTATTAATGATTGGGGGTCGGAATTCTTCTAACTTTTCACCCGTAGTATAGGATTTGATCAAGATTGGTGCCTGGGATCTCTGGATGGTTTTTGTATTTGATATGTCATATGTTTGCTAAGTTTGTTCCCATTTAATTTTGAGCCCAGAATTTGACCTTTTCAAAATCTGACTAGTCGAACGAGATTAGAGTTGCAGCGGTGCAATCAGAAGTTTGTGGATATTCTATTTATTTGAACTTGGTATATGTTAAAGGGTTGCGCTTCGGGTTCTAAACTCCTAGCTAGCTCTTGAGCCATGTCATTGTCCATTTAAGAGAACCTTCTTTGCTCCCTCAACCCTGCGCCCAAGAAGTTATTTGATCAACATGGCTGTCACTTGTACATCATTGGATTTCAGAGGAAGACATTCAAAAAAAAAAAAATGTTAACCATGTATTTAATGATTTTAAAAGTCACTATCATATTGAATAATTTCTCTGCCCTCTAGAATTTGGAGATAAACCAAAATATAAAGAAAAAACCTTGGTTAGATTCCTTGCAACTTTAATCAAGCTGGTTGATACTTGCTGTAAATATCTAAAAGGTTCTGACCTATAGGTTAAGATGTATGACGTTTCCTATAAAAGATATTGTTTCAATTATTCAGCATTATTTCTTCATGATAGAACCTCGGGATTTTGATGTTTCTTTTTACAATGTTTCTAATTGTTTGCAATTTTCGTACCTTTGTTCTCAACCTTCATGTTCCACATTTATATTACTTCCAGCAGCATTGCAGCTATTGGATAGGATCGATCTTTAAGCTGTTAAACATTGAGTTTTATTCTCAAAAGCAAAAATATTCAGAAGAAAGTTTCCCGTAATGTAATATGATACAAATCCTCTGTTTATTTGGATACTGATGGCCTGTGTTTATTAAGGTTTAGTTTTAACACAATTGACTGCCTAATCTACTAACATGTTTTTTTTTTATAAAAAAGAATTTCTACCATCAAATTTAATCATGTAGAAAACAGATTCCATCATCTTGGACTGGGCTTTATGCTTAATGTGAATCTGTTTTTGAATTGCAATGGTGCATGCAGATTTTCAGAGTTTGTATTCAACAGTTATTAGGGACATTATAGCTTCCTCATCCGATAAGTTTTATATGCTTGTAGATCAAAATGACCAATGAAAGAAGAATGCTAACTTTTGGTAATGTTTCCTTCCTTTCCACTTTGAAGGTACTCTATCACAAAAGCCTTCTGTATTGCTTTTTTGATGACATTCTTCAGTGCATTTGATGTACCTGTATTTTGGCCTATACTTCTATTTTACTGGGTGGTGCTGTTCACTCTCACCATGAGGAGACAGATATCACACATGATCAAATATAAATATGTCCCGTTCTCTTTTGGTAAACAGGTATGTTCTCTGTTTTCATGGTCTTCTTCCATTCATCATGTCCCATGCAATTATTAACTAACGATGTTCTTTACTTCTTGATAGCGATATGATGGAAAGGGTGCAGCTTCGAGCGACACCAAAAGCCTTCTAAAGGATTGAAGTCTTTGGGTAGATTAATAGTAGTAATTATTTCTGTTAAGTAGAGAACTGGTAAACTTTATTTATTCTGCTGTATTCCTGTTCTCAGTTAGTTCTACATGAGGAGATGGCAGTAAGAGATAATTGTACTGAAGATAAGTTAGGCTGATCATCTGCTGCTGGTTTTTCATTTCCCCTGATCTTTGTACTTCTTTGGATGTTCCTGTGGAAAATCAAGTTTCGGGAAGATAATAGTATGATTTCTGAATTTTCCCCTCTCCTTGACAGATGATATCTTTCAGTCGTAAAGATTGAGAAATCACTGTAATCCCATTCATCTGTAGGAAAAGCTAATTTAACGTCTAATTTCTTTTGAGCTTTTACAAGTTCTCGTGTAAAGAAGCAGCAAAAGCCAAGCTTCTTTTGATATCGTGAAAATATTATGGGCATTATAGAAATAGTAGCCTATGAAAGAGTGAATCTAAGACAGCATTTAC

mRNA sequence

AATATGCTAAAATATTGACTTGGGGAGTTGCGAAGGGGAAGCGCCAAGGATCGGTTTAAAAAGAAAAAAGATAGAGAAGGAAAAAGAGAAAAAAAATTGATCGAGGGGAATCAGCCCGCGAACGACGGCCAGTTCGTCAACCCACCTTACCTTGGCAAATGGCTGAAGGGAGATAATTACAGATACATAGGAACGGGGAAATCAAATCTCGAGTATATAAATTGGGCGACGACGGTTGCCGATACTTTTGGGTCCTAATGGAAAGTGAAGCGGCTGGCGTTGGTCTCGGCGGCGCGGAAGATGTCTATTCTACCACTCTCTTTTCACGGTGGAGCCATGGCGTTTCCCGGCGGTATCAACACCTTCTCGATAGGTGTACCCCCTACATCTTCTACCGTTGGATCGCCTGTTTTTTCGTCGCCTCTATCTATGTCCTTCGGGTTTACCTCATCGAAGGATTCTACATCGTCTCTTACGGTCTCGGAATTTACATCCTCAATCTTCTAATTGGGTTTCTCTCGCCCCAAGTGGATCCTGAGATCCTGGATCTCCATGACGGCCCTGCGCTTCCCCTCAGGGAATCCGATGAGTTCCGCCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGGTACTCTATCACAAAAGCCTTCTGTATTGCTTTTTTGATGACATTCTTCAGTGCATTTGATGTACCTGTATTTTGGCCTATACTTCTATTTTACTGGGTGGTGCTGTTCACTCTCACCATGAGGAGACAGATATCACACATGATCAAATATAAATATGTCCCGTTCTCTTTTGGTAAACAGCGATATGATGGAAAGGGTGCAGCTTCGAGCGACACCAAAAGCCTTCTAAAGGATTGAAGTCTTTGGTTAGTTCTACATGAGGAGATGGCAGTAAGAGATAATTGTACTGAAGATAAGTTAGGCTGATCATCTGCTGCTGGTTTTTCATTTCCCCTGATCTTTGTACTTCTTTGGATGTTCCTGTGGAAAATCAAGTTTCGGGAAGATAATAGTATGATTTCTGAATTTTCCCCTCTCCTTGACAGATGATATCTTTCAGTCGTAAAGATTGAGAAATCACTGTAATCCCATTCATCTGTAGGAAAAGCTAATTTAACGTCTAATTTCTTTTGAGCTTTTACAAGTTCTCGTGTAAAGAAGCAGCAAAAGCCAAGCTTCTTTTGATATCGTGAAAATATTATGGGCATTATAGAAATAGTAGCCTATGAAAGAGTGAATCTAAGACAGCATTTAC

Coding sequence (CDS)

ATGGAAAGTGAAGCGGCTGGCGTTGGTCTCGGCGGCGCGGAAGATGTCTATTCTACCACTCTCTTTTCACGGTGGAGCCATGGCGTTTCCCGGCGGTATCAACACCTTCTCGATAGGTGTACCCCCTACATCTTCTACCGTTGGATCGCCTGTTTTTTCGTCGCCTCTATCTATGTCCTTCGGGTTTACCTCATCGAAGGATTCTACATCGTCTCTTACGGTCTCGGAATTTACATCCTCAATCTTCTAATTGGGTTTCTCTCGCCCCAAGTGGATCCTGAGATCCTGGATCTCCATGACGGCCCTGCGCTTCCCCTCAGGGAATCCGATGAGTTCCGCCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGGTACTCTATCACAAAAGCCTTCTGTATTGCTTTTTTGATGACATTCTTCAGTGCATTTGATGTACCTGTATTTTGGCCTATACTTCTATTTTACTGGGTGGTGCTGTTCACTCTCACCATGAGGAGACAGATATCACACATGATCAAATATAAATATGTCCCGTTCTCTTTTGGTAAACAGCGATATGATGGAAAGGGTGCAGCTTCGAGCGACACCAAAAGCCTTCTAAAGGATTGA

Homology

[Close]

BLAST of CmoCh03G009790 vs. Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.3e-67
Identity = 127/185 (68.65%), Postives = 148/185 (80.00%), Query Frame = 1


Query: 11  GGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGFYI 70
           GG     +T +  R +H   R YQH LD+ TP+  YRWI    VA IY LRVY I+GFYI
Sbjct: 5   GGDSGSVATPVQQR-AHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYI 64

Query: 71  VSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLPEFKFWYSITK 130
           ++YGLGIY+LNLLIGFLSP VDPE   + DGP+LP R SDEF+PF+RRLPEFKFWYS+TK
Sbjct: 65  IAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTK 124

Query: 131 AFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGK 190
           AFCIAFLMTFFS FDVPVFWPILL YW+VLF LTMRRQI+HMIKYKY+PFSFGKQ+Y G+
Sbjct: 125 AFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYGGR 184

Query: 191 GAASS 196
            ++ S
Sbjct: 185 SSSGS 188

[Close]

BLAST of CmoCh03G009790 vs. Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 3.4e-61
Identity = 122/187 (65.24%), Postives = 144/187 (77.01%), Query Frame = 1


Query: 9   GLGGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGF 68
           G GG     +T +  +  H   R YQ+ LD+ TP+   RWI       IY LRVY I GF
Sbjct: 3   GSGGDSGSMATPVQKK-VHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGF 62

Query: 69  YIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLPEFKFWYSI 128
           YI+SYGLGIY+LNLLIGFLSP VDPE L++ DG  LP R SDEF+PF+RRLPEFKFWYS+
Sbjct: 63  YIISYGLGIYLLNLLIGFLSPLVDPE-LEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 122

Query: 129 TKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYD 188
           TKAFCIAFLMTFFS FDVPVFWPILL YWVVLF LTMRRQI+HMIK+KY+PFS GKQ+Y 
Sbjct: 123 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 182

Query: 189 GKGAASS 196
           G+ ++++
Sbjct: 183 GRKSSAN 187

[Close]

BLAST of CmoCh03G009790 vs. Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-60
Identity = 113/176 (64.20%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 23  SRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGFYIVSYGLGIYILNL 82
           +R  H  S+R QHLLD+  P++ YRWIAC  V  IY++RVY +EGFYI++Y +GIY+LNL
Sbjct: 38  NRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNL 97

Query: 83  LIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLPEFKFWYSITKAFCIAFLMTFFS 142
           +I FLSPQ DPE   L  G +LP R SDE+RPFVRRLPEFKFW SI +AF I F+MTFF 
Sbjct: 98  IIAFLSPQEDPEA-SLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFE 157

Query: 143 AFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGKGAASSDTK 199
            FDVPVFWPILLFYWV+LF LTMR+QI HMIKY+YVPFSFGK++Y  K A +  ++
Sbjct: 158 VFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQYGKKPAPTESSE 212

[Close]

BLAST of CmoCh03G009790 vs. Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.7e-50
Identity = 95/159 (59.75%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 33  YQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVD 92
           YQ  LD+ TPY   RWI    ++ IY++RVYL++G+YIV+Y LGIY LNL I FLSP+VD
Sbjct: 29  YQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVD 88

Query: 93  PEIL-DLHDGPALPLRESDEFRPFVRRLPEFKFWYSITKAFCIAFLMTFFSAFDVPVFWP 152
           P ++ D  DGP+LP R+++EFRPF+RRLPEFKFW+S TK   +A   TFF AF+VPVFWP
Sbjct: 89  PSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFFEAFNVPVFWP 148

Query: 153 ILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGK 191
           IL+ Y+++LF +TM+RQI HMIKY+Y+PF+ GK++Y GK
Sbjct: 149 ILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRKYKGK 187

[Close]

BLAST of CmoCh03G009790 vs. Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.5e-50
Identity = 99/190 (52.11%), Postives = 139/190 (73.16%), Query Frame = 1


Query: 2   ESEAAGVGLGGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLR 61
           E ++ G  + G   V     FSR    + + YQ  LD+ TPY   RW+    ++ +Y++R
Sbjct: 3   EGDSVGDSVHGKPSVVYR-FFSR----LGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIR 62

Query: 62  VYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEIL-DLHDGPALPLRESDEFRPFVRRLP 121
           VYL++G+YIV+Y LGIY LNL I FLSP+VDP ++ D  DGP+LP ++++EFRPF+RRLP
Sbjct: 63  VYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLP 122

Query: 122 EFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPF 181
           EFKFW++ TK   +A + TFF AF+VPVFWPIL+ Y+++LF +TM+RQI HMIKY+Y+PF
Sbjct: 123 EFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 182

Query: 182 SFGKQRYDGK 191
           + GK+RY GK
Sbjct: 183 THGKRRYKGK 187

[Close]

BLAST of CmoCh03G009790 vs. TrEMBL
Match: M5W149_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011411mg PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 3.8e-80
Identity = 155/205 (75.61%), Postives = 177/205 (86.34%), Query Frame = 1


Query: 1   MESEAAGVGLGGA--EDVYSTTLF---SRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVA 60
           M++ AAGVGL  A  +D +  + F   S WS+G+SRRYQH+LDR TP++ YRW+AC  VA
Sbjct: 1   MDAGAAGVGLAAAAADDPFKGSPFAAVSDWSYGISRRYQHVLDRTTPHVLYRWLACLGVA 60

Query: 61  SIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDL-HDGPALPLRESDEFRP 120
            +YV+RVYL++GFY+VSYGLGIYILNLLIGFLSPQVDPEI DL  DGP+LP R SDEFRP
Sbjct: 61  LVYVIRVYLVQGFYVVSYGLGIYILNLLIGFLSPQVDPEIHDLASDGPSLPTRGSDEFRP 120

Query: 121 FVRRLPEFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIK 180
           FVRRLPEFKFWYSI KAFCIAF+MTFFSAFDVPVFWPILLFYWVVLF LTMRRQI HMIK
Sbjct: 121 FVRRLPEFKFWYSIAKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFVLTMRRQIVHMIK 180

Query: 181 YKYVPFSFGKQRYDGKGAASSDTKS 200
           YKYVPFSFGKQRYDG+ A+SS T++
Sbjct: 181 YKYVPFSFGKQRYDGRKASSSSTET 205

[Close]

BLAST of CmoCh03G009790 vs. TrEMBL
Match: M1CC10_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024959 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.1e-78
Identity = 145/201 (72.14%), Postives = 169/201 (84.08%), Query Frame = 1


Query: 1   MESEAAGVGLGGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVL 60
           M+   AG G  GA DV  +  F +W+   S  +QH LD+ TPY+ YRWIA FF+A +YV+
Sbjct: 1   MDISTAGAG-AGAGDVTPSGAFCQWTSSASLSFQHFLDKTTPYLLYRWIAFFFIAVLYVV 60

Query: 61  RVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLP 120
           RVYL+EGFY++SY LGIY+LNLLIGFLSPQVDPE+ DL DGP LP RE+DEFRPFVRRLP
Sbjct: 61  RVYLVEGFYVISYALGIYLLNLLIGFLSPQVDPELQDLSDGPTLPTRETDEFRPFVRRLP 120

Query: 121 EFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPF 180
           EFKFWYSITKAFCIAF++TFFS  DVPVFWPIL+FYWVVLFTLTMRRQI HM+KYKY+PF
Sbjct: 121 EFKFWYSITKAFCIAFVLTFFSVLDVPVFWPILVFYWVVLFTLTMRRQIRHMLKYKYLPF 180

Query: 181 SFGKQRYDGKGAASSDTKSLL 202
           SFGKQRYDGK AASS+++ LL
Sbjct: 181 SFGKQRYDGKKAASSESEDLL 200

[Close]

BLAST of CmoCh03G009790 vs. TrEMBL
Match: A0A0V0HK50_SOLCH (Uncharacterized protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.1e-78
Identity = 145/201 (72.14%), Postives = 169/201 (84.08%), Query Frame = 1


Query: 1   MESEAAGVGLGGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVL 60
           M+   AG G  GA DV  +  F +W+   S  +QH LD+ TPY+ YRWIA FF+A +YV+
Sbjct: 1   MDINTAGAG-AGAGDVTPSGTFCQWTSSASLSFQHFLDKTTPYLLYRWIAFFFIAVLYVV 60

Query: 61  RVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLP 120
           RVYL+EGFY++SY LGIY+LNLLIGFLSPQVDPE+ DL DGP LP RE+DEFRPFVRRLP
Sbjct: 61  RVYLVEGFYVISYALGIYLLNLLIGFLSPQVDPELQDLSDGPTLPTRETDEFRPFVRRLP 120

Query: 121 EFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPF 180
           EFKFWYSITKAFCIAF++TFFS  DVPVFWPIL+FYWVVLFTLTMRRQI HM+KYKY+PF
Sbjct: 121 EFKFWYSITKAFCIAFVLTFFSVLDVPVFWPILVFYWVVLFTLTMRRQIRHMLKYKYLPF 180

Query: 181 SFGKQRYDGKGAASSDTKSLL 202
           SFGKQRYDGK AASS+++ LL
Sbjct: 181 SFGKQRYDGKKAASSESEDLL 200

[Close]

BLAST of CmoCh03G009790 vs. TrEMBL
Match: K4BD97_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.1e-78
Identity = 144/201 (71.64%), Postives = 168/201 (83.58%), Query Frame = 1


Query: 1   MESEAAGVGLGGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVL 60
           M+   AG G G   DV  +  F +W+   S  +QH LD+ TPY+ YRWIA FF+A +YV+
Sbjct: 1   MDINTAGAGAG---DVTPSGAFCQWTSSASLSFQHFLDKTTPYLLYRWIAFFFIAVLYVV 60

Query: 61  RVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLP 120
           RVYL+EGFY++SY LGIY+LNLLIGFLSPQVDPE+ DL DGP LP RE+DEFRPFVRRLP
Sbjct: 61  RVYLVEGFYVISYALGIYLLNLLIGFLSPQVDPELQDLSDGPTLPTRETDEFRPFVRRLP 120

Query: 121 EFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPF 180
           EFKFWYSITKAFCIAF++TFFS  DVPVFWPIL+FYWVVLFTLTMRRQI HM+KYKY+PF
Sbjct: 121 EFKFWYSITKAFCIAFVLTFFSVLDVPVFWPILVFYWVVLFTLTMRRQIRHMLKYKYLPF 180

Query: 181 SFGKQRYDGKGAASSDTKSLL 202
           SFGKQRYDGK AASS+++ LL
Sbjct: 181 SFGKQRYDGKKAASSESEDLL 198

[Close]

BLAST of CmoCh03G009790 vs. TrEMBL
Match: D7SVS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00030 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-77
Identity = 150/203 (73.89%), Postives = 168/203 (82.76%), Query Frame = 1


Query: 4   EAAGVGLGGAEDVYST---TLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVL 63
           E A  G  G ED+ S+   T  SRW+H +SR+YQHLLD+ TP+I  RWI  F +A IY++
Sbjct: 2   ETAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYIV 61

Query: 64  RVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLP 123
           RVY ++GFYIVSYGLGIYILNLLIGFLSPQVDPEI +L DGP LP R SDEFRPFVRRLP
Sbjct: 62  RVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRLP 121

Query: 124 EFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPF 183
           EFKFWYSITKAFCIAF+MTFFS FDVPVFWPILLFYW+VLFTLTMRRQI HMIKYKYVPF
Sbjct: 122 EFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVPF 181

Query: 184 SFGKQRYDGKGAASSDTKSLLKD 204
           SFGKQRY GK  +S++  SL  D
Sbjct: 182 SFGKQRYGGKRTSSTEDMSLPHD 204

[Close]

BLAST of CmoCh03G009790 vs. TAIR10
Match: AT4G39220.1 (AT4G39220.1 Rer1 family protein)

HSP 1 Score: 255.4 bits (651), Expect = 3.0e-68
Identity = 127/185 (68.65%), Postives = 148/185 (80.00%), Query Frame = 1


Query: 11  GGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGFYI 70
           GG     +T +  R +H   R YQH LD+ TP+  YRWI    VA IY LRVY I+GFYI
Sbjct: 5   GGDSGSVATPVQQR-AHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYI 64

Query: 71  VSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLPEFKFWYSITK 130
           ++YGLGIY+LNLLIGFLSP VDPE   + DGP+LP R SDEF+PF+RRLPEFKFWYS+TK
Sbjct: 65  IAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTK 124

Query: 131 AFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGK 190
           AFCIAFLMTFFS FDVPVFWPILL YW+VLF LTMRRQI+HMIKYKY+PFSFGKQ+Y G+
Sbjct: 125 AFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYGGR 184

Query: 191 GAASS 196
            ++ S
Sbjct: 185 SSSGS 188

[Close]

BLAST of CmoCh03G009790 vs. TAIR10
Match: AT2G21600.1 (AT2G21600.1 endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 236.1 bits (601), Expect = 1.9e-62
Identity = 122/187 (65.24%), Postives = 144/187 (77.01%), Query Frame = 1


Query: 9   GLGGAEDVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGF 68
           G GG     +T +  +  H   R YQ+ LD+ TP+   RWI       IY LRVY I GF
Sbjct: 3   GSGGDSGSMATPVQKK-VHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGF 62

Query: 69  YIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLPEFKFWYSI 128
           YI+SYGLGIY+LNLLIGFLSP VDPE L++ DG  LP R SDEF+PF+RRLPEFKFWYS+
Sbjct: 63  YIISYGLGIYLLNLLIGFLSPLVDPE-LEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 122

Query: 129 TKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYD 188
           TKAFCIAFLMTFFS FDVPVFWPILL YWVVLF LTMRRQI+HMIK+KY+PFS GKQ+Y 
Sbjct: 123 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 182

Query: 189 GKGAASS 196
           G+ ++++
Sbjct: 183 GRKSSAN 187

[Close]

BLAST of CmoCh03G009790 vs. TAIR10
Match: AT2G23310.1 (AT2G23310.1 Rer1 family protein)

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-61
Identity = 113/176 (64.20%), Postives = 138/176 (78.41%), Query Frame = 1


Query: 23  SRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGFYIVSYGLGIYILNL 82
           +R  H  S+R QHLLD+  P++ YRWIAC  V  IY++RVY +EGFYI++Y +GIY+LNL
Sbjct: 38  NRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNL 97

Query: 83  LIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLPEFKFWYSITKAFCIAFLMTFFS 142
           +I FLSPQ DPE   L  G +LP R SDE+RPFVRRLPEFKFW SI +AF I F+MTFF 
Sbjct: 98  IIAFLSPQEDPEA-SLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFE 157

Query: 143 AFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGKGAASSDTK 199
            FDVPVFWPILLFYWV+LF LTMR+QI HMIKY+YVPFSFGK++Y  K A +  ++
Sbjct: 158 VFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQYGKKPAPTESSE 212

[Close]

BLAST of CmoCh03G009790 vs. TAIR10
Match: AT2G18240.1 (AT2G18240.1 Rer1 family protein)

HSP 1 Score: 194.9 bits (494), Expect = 4.8e-50
Identity = 97/170 (57.06%), Postives = 124/170 (72.94%), Query Frame = 1


Query: 15  DVYSTTLFSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGFYIVSYG 74
           D    +  ++W    S+ +Q+ LDR  P I  RW+     A IY+ RVY + G++++SYG
Sbjct: 12  DTIVASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYG 71

Query: 75  LGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRRLPEFKFWYSITKAFCI 134
           L  YILNLLIGFLSP+VDPE L+  D  +LP+ ESDE++PFVRRLPEFKFWY+ TKAF +
Sbjct: 72  LATYILNLLIGFLSPKVDPE-LEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVV 131

Query: 135 AFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGK 185
           AF+MTFFS  DVPVFWPILL YW+VL++LTM+R I HM KY+Y PF   K
Sbjct: 132 AFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]

BLAST of CmoCh03G009790 vs. NCBI nr
Match: gi|658006368|ref|XP_008338341.1| (PREDICTED: protein RER1A-like [Malus domestica])

HSP 1 Score: 306.6 bits (784), Expect = 3.2e-80
Identity = 159/206 (77.18%), Postives = 174/206 (84.47%), Query Frame = 1


Query: 1   MESEAAGVGLGGA--EDVYSTTLF---SRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVA 60
           M++ AAGVGL  A  +D +  + F   S WS+GVSRRYQH+LDR TP++ YRW+AC   A
Sbjct: 1   MDTGAAGVGLAAAAXDDPFKGSPFAAVSDWSYGVSRRYQHVLDRTTPHVLYRWLACLAAA 60

Query: 61  SIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH--DGPALPLRESDEFR 120
            IYVLRVYL++GFY+VSYGLGIYILNLLIGFLSPQVDPEI DL   DGP+LP R SDEFR
Sbjct: 61  LIYVLRVYLVQGFYVVSYGLGIYILNLLIGFLSPQVDPEIHDLSSSDGPSLPTRGSDEFR 120

Query: 121 PFVRRLPEFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMI 180
           PFVRRLPEFKFWYSITKAFCIAF MTFFSAFDVPVFWPILLFYWVVLF LTMRRQI HMI
Sbjct: 121 PFVRRLPEFKFWYSITKAFCIAFAMTFFSAFDVPVFWPILLFYWVVLFVLTMRRQIVHMI 180

Query: 181 KYKYVPFSFGKQRYDGKGAASSDTKS 200
           KYKYVPFSFGKQRYDGK A SS  K+
Sbjct: 181 KYKYVPFSFGKQRYDGKKAHSSSVKA 206

[Close]

BLAST of CmoCh03G009790 vs. NCBI nr
Match: gi|595829590|ref|XP_007205901.1| (hypothetical protein PRUPE_ppa011411mg [Prunus persica])

HSP 1 Score: 305.8 bits (782), Expect = 5.5e-80
Identity = 155/205 (75.61%), Postives = 177/205 (86.34%), Query Frame = 1


Query: 1   MESEAAGVGLGGA--EDVYSTTLF---SRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVA 60
           M++ AAGVGL  A  +D +  + F   S WS+G+SRRYQH+LDR TP++ YRW+AC  VA
Sbjct: 1   MDAGAAGVGLAAAAADDPFKGSPFAAVSDWSYGISRRYQHVLDRTTPHVLYRWLACLGVA 60

Query: 61  SIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDL-HDGPALPLRESDEFRP 120
            +YV+RVYL++GFY+VSYGLGIYILNLLIGFLSPQVDPEI DL  DGP+LP R SDEFRP
Sbjct: 61  LVYVIRVYLVQGFYVVSYGLGIYILNLLIGFLSPQVDPEIHDLASDGPSLPTRGSDEFRP 120

Query: 121 FVRRLPEFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIK 180
           FVRRLPEFKFWYSI KAFCIAF+MTFFSAFDVPVFWPILLFYWVVLF LTMRRQI HMIK
Sbjct: 121 FVRRLPEFKFWYSIAKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFVLTMRRQIVHMIK 180

Query: 181 YKYVPFSFGKQRYDGKGAASSDTKS 200
           YKYVPFSFGKQRYDG+ A+SS T++
Sbjct: 181 YKYVPFSFGKQRYDGRKASSSSTET 205

[Close]

BLAST of CmoCh03G009790 vs. NCBI nr
Match: gi|1009145255|ref|XP_015890232.1| (PREDICTED: protein RER1A-like [Ziziphus jujuba])

HSP 1 Score: 303.5 bits (776), Expect = 2.7e-79
Identity = 153/202 (75.74%), Postives = 175/202 (86.63%), Query Frame = 1


Query: 1   MESEAAGVGLGGAEDVYSTTL--FSRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIY 60
           M++ AAGVGL   E   S+ +   + W++GVSRRYQHLLD+ TP++  RWIA   VA IY
Sbjct: 1   MDNGAAGVGLAAEELSSSSPMAALTGWTYGVSRRYQHLLDKSTPHMLRRWIATLVVAFIY 60

Query: 61  VLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRESDEFRPFVRR 120
           V+RVY ++GFYIVSYGLGIYILNLLIGFLSPQVDP+I +L DGP+LP R SDEFRPFVRR
Sbjct: 61  VVRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPDIHELSDGPSLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYV 180
           LPEFKFWYSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLF +TMRRQISHMIKYKYV
Sbjct: 121 LPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFVMTMRRQISHMIKYKYV 180

Query: 181 PFSFGKQRYDGKGAASSDTKSL 201
           PFSFGKQRYDGK ++S+D+ SL
Sbjct: 181 PFSFGKQRYDGKRSSSTDSTSL 202

[Close]

BLAST of CmoCh03G009790 vs. NCBI nr
Match: gi|694394130|ref|XP_009372469.1| (PREDICTED: protein RER1A-like, partial [Pyrus x bretschneideri])

HSP 1 Score: 302.8 bits (774), Expect = 4.7e-79
Identity = 151/179 (84.36%), Postives = 160/179 (89.39%), Query Frame = 1


Query: 23  SRWSHGVSRRYQHLLDRCTPYIFYRWIACFFVASIYVLRVYLIEGFYIVSYGLGIYILNL 82
           S WSHGVSRRYQHLLDR TP++ YRW+AC  VA IYVLRVYL++GFY+VSYGLGIY+LNL
Sbjct: 8   SDWSHGVSRRYQHLLDRTTPHVLYRWLACLAVALIYVLRVYLVQGFYVVSYGLGIYVLNL 67

Query: 83  LIGFLSPQVDPEILDLH--DGPALPLRESDEFRPFVRRLPEFKFWYSITKAFCIAFLMTF 142
           LIGFLSPQVDPEI DL   DGP+LP R SDEFRPFVRRLPEFKFWYSITKAFCIAF MTF
Sbjct: 68  LIGFLSPQVDPEIHDLSSSDGPSLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFAMTF 127

Query: 143 FSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGKGAASSDTKS 200
           FSAFDVPVFWPILLFYWVVLF LTMRRQI HMIKYKYVPFSFGKQRYDGK A SS  K+
Sbjct: 128 FSAFDVPVFWPILLFYWVVLFVLTMRRQIVHMIKYKYVPFSFGKQRYDGKKAHSSSVKA 186

[Close]

BLAST of CmoCh03G009790 vs. NCBI nr
Match: gi|470103142|ref|XP_004288003.1| (PREDICTED: protein RER1A [Fragaria vesca subsp. vesca])

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-78
Identity = 155/212 (73.11%), Postives = 176/212 (83.02%), Query Frame = 1


Query: 1   MESEAAGVGLGGA---EDVYSTTLFSR--------WSHGVSRRYQHLLDRCTPYIFYRWI 60
           M+  AAGVGL  A   +D  S++L S         W+ GVSRRYQHLLD+ TP++ +RW+
Sbjct: 1   MDPGAAGVGLAAATTADDPPSSSLGSSTPLDAVQAWTFGVSRRYQHLLDKSTPHVLHRWL 60

Query: 61  ACFFVASIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHDGPALPLRES 120
               VA +YVLRVYL+EGFY+VSYGLGIY+LNLLIGFLSPQVDPEI DL DGP+LP R S
Sbjct: 61  GTLAVALVYVLRVYLVEGFYVVSYGLGIYLLNLLIGFLSPQVDPEIHDLSDGPSLPTRGS 120

Query: 121 DEFRPFVRRLPEFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI 180
           DEFRPFVRRLPEFKFWYSITKAFCIAF+MTFFSAFDVPVFWPILLFYW+VLF LTMRRQI
Sbjct: 121 DEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWLVLFVLTMRRQI 180

Query: 181 SHMIKYKYVPFSFGKQRYDGKGAASSDTKSLL 202
            HMIKYKYVPFS GKQRYDGK A++S+T +LL
Sbjct: 181 IHMIKYKYVPFSVGKQRYDGKKASASETTTLL 212

The following BLAST results are available for this feature:

BLAST of CmoCh03G009790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RER1A_ARATH	5.3e-67	68.65	Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1	[more]
RER1B_ARATH	3.4e-61	65.24	Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2	[more]
RER1C_ARATH	2.2e-60	64.20	Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1	[more]
RER1_CHICK	2.7e-50	59.75	Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1	[more]
RER1_MOUSE	3.5e-50	52.11	Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1	[more]

BLAST of CmoCh03G009790 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W149_PRUPE	3.8e-80	75.61	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011411mg PE=4 SV=1	[more]
M1CC10_SOLTU	2.1e-78	72.14	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024959 PE=4 SV=1	[more]
A0A0V0HK50_SOLCH	2.1e-78	72.14	Uncharacterized protein OS=Solanum chacoense PE=4 SV=1	[more]
K4BD97_SOLLC	6.1e-78	71.64	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
D7SVS2_VITVI	1.4e-77	73.89	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00030 PE=4 SV=...	[more]

BLAST of CmoCh03G009790 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39220.1	3.0e-68	68.65	Rer1 family protein	[more]
AT2G21600.1	1.9e-62	65.24	endoplasmatic reticulum retrieval protein 1B	[more]
AT2G23310.1	1.2e-61	64.20	Rer1 family protein	[more]
AT2G18240.1	4.8e-50	57.06	Rer1 family protein	[more]

BLAST of CmoCh03G009790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|658006368\|ref\|XP_008338341.1\|	3.2e-80	77.18	PREDICTED: protein RER1A-like [Malus domestica]	[more]
gi\|595829590\|ref\|XP_007205901.1\|	5.5e-80	75.61	hypothetical protein PRUPE_ppa011411mg [Prunus persica]	[more]
gi\|1009145255\|ref\|XP_015890232.1\|	2.7e-79	75.74	PREDICTED: protein RER1A-like [Ziziphus jujuba]	[more]
gi\|694394130\|ref\|XP_009372469.1\|	4.7e-79	84.36	PREDICTED: protein RER1A-like, partial [Pyrus x bretschneideri]	[more]
gi\|470103142\|ref\|XP_004288003.1\|	1.4e-78	73.11	PREDICTED: protein RER1A [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004932	Rer1

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045185	maintenance of protein location
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G009790.1	CmoCh03G009790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004932	Retrieval of early ER protein Rer1	PIR	PIRSF016013	AtER_Rer1p	coord: 12..198 score: 1.8
IPR004932	Retrieval of early ER protein Rer1	PANTHER	PTHR10743	PROTEIN RER1	coord: 4..203 score: 1.5E
IPR004932	Retrieval of early ER protein Rer1	PFAM	PF03248	Rer1	coord: 26..187 score: 6.8
None	No IPR available	PANTHER	PTHR10743:SF1	PROTEIN RER1C	coord: 4..203 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G009790	CmaCh03G009570	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G009790	CmaCh07G006860	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G009790	Cla013971	Watermelon (97103) v1	cmowmB623
CmoCh03G009790	ClCG01G017020	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G009790	Lsi01G009550	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G009790	Cp4.1LG19g10940	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G009790	Cp4.1LG10g02390	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G009790	Cla97C01G016170	Watermelon (97103) v2	cmowmbB642
CmoCh03G009790	Bhi03G000719	Wax gourd	cmowgoB0792
CmoCh03G009790	Carg00824	Silver-seed gourd	carcmoB0551
CmoCh03G009790	Carg05204	Silver-seed gourd	carcmoB1095

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G009790	CmoCh07G006990	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G009790	Silver-seed gourd	carcmoB0262
CmoCh03G009790	Silver-seed gourd	carcmoB1046
CmoCh03G009790	Cucumber (Chinese Long) v3	cmocucB0785
CmoCh03G009790	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G009790	Wax gourd	cmowgoB0807
CmoCh03G009790	Cucurbita moschata (Rifu)	cmocmoB028
CmoCh03G009790	Cucurbita moschata (Rifu)	cmocmoB146
CmoCh03G009790	Cucurbita moschata (Rifu)	cmocmoB360
CmoCh03G009790	Cucumber (Gy14) v1	cgycmoB0227
CmoCh03G009790	Cucumber (Gy14) v1	cgycmoB0968
CmoCh03G009790	Cucumber (Gy14) v1	cgycmoB1091
CmoCh03G009790	Cucurbita maxima (Rimu)	cmacmoB058
CmoCh03G009790	Cucurbita maxima (Rimu)	cmacmoB478
CmoCh03G009790	Wild cucumber (PI 183967)	cmocpiB652
CmoCh03G009790	Wild cucumber (PI 183967)	cmocpiB672
CmoCh03G009790	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G009790	Cucumber (Chinese Long) v2	cmocuB640
CmoCh03G009790	Cucumber (Chinese Long) v2	cmocuB661
CmoCh03G009790	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G009790	Melon (DHL92) v3.5.1	cmomeB588
CmoCh03G009790	Melon (DHL92) v3.5.1	cmomeB596
CmoCh03G009790	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G009790	Watermelon (Charleston Gray)	cmowcgB578
CmoCh03G009790	Watermelon (Charleston Gray)	cmowcgB597
CmoCh03G009790	Watermelon (Charleston Gray)	cmowcgB602
CmoCh03G009790	Watermelon (97103) v1	cmowmB611
CmoCh03G009790	Watermelon (97103) v1	cmowmB618
CmoCh03G009790	Watermelon (97103) v1	cmowmB638
CmoCh03G009790	Cucurbita pepo (Zucchini)	cmocpeB633
CmoCh03G009790	Cucurbita pepo (Zucchini)	cmocpeB637
CmoCh03G009790	Bottle gourd (USVL1VR-Ls)	cmolsiB601
CmoCh03G009790	Cucumber (Gy14) v2	cgybcmoB510
CmoCh03G009790	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G009790	Melon (DHL92) v3.6.1	cmomedB683
CmoCh03G009790	Melon (DHL92) v3.6.1	cmomedB694