CmoCh03G008470 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G008470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RAC-like GTP binding protein 5
Location	Cmo_Chr03 : 6700323 .. 6702818 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGGTTTCTCCTCTCGCCAAGTACAAGCTCGTCTTCCTCGGCGATCAATCCGTTGGTAAAACCAGCATTATCACCCGCTTCATGTACGACAAGTTTGATACCACCTATCAGGTCGTCTTTCTAATTGCCTTGCATCTTATTTTCTTCATTTTATGCGTCTTTTTTTCCTCTCGCCTATTTTGATTCGGTAGTTTGATAGAATAGGTGTTTGCTTCTGGAAATGACTTTCTTTGACGCATCTCTGTTTCCATATATATCTGAATCCTGATAGAAATTTCTGGGAATTCATGTGGATCCGAGTTATGTGGCGTTGTTTCTAATCGTGTTTGTTTAGGTGGTCACATGGAAAACGTAGTCGGTTATATTTACGAATTTCATCAACGCCTTTGACGACTCGTGTTTCTAAACGGTGATTGATCTTTTTGCAATCGATCAGATTTACCGAATGATTCAGATTACTCTGTTGATTCATCCACATCTGGTGGCTACGAACATTCTTTTTTTCGTCAAATGGAAACGTTCTTTGTTTTCTGTGTAAAAACTACGTAGAACAGGGGAAAAGAATGGGAAATTGCCTCTAATATGGTTGACTATATGCACTATCAGATTATCTAGCGTTCATTAGATCCGAGAGAGGGAGAGGAGAAGATGGTCCATACCTTAAAAAGTAAATATATTTCAGGGCTGTGTAGTTTGAAACGCTTAAAATTTCTCATACCTTAACTACGCGTCGTCAGTGTACTTGGTACTCTGCTTGTGGACCTCCTTTCTTTATGCTGACATAAACTTTATTACAGGCTACAATTGGAATTGACTTCTTGTCCAAAACAATGTACCTTGAAGATCGAACAATTCGGTTGCAGCTTTGGTATGATGTGTTTATTTCTTTCCGATCATTTACTGAAGATTGATTTACCTATCGGTTTTGTTTCCCCATCCAGACTCTTAGGATTACAATTTTGATTCTTTTCAATGTGTTGTAGATTTCTGATTCTTTTCAGTCCGATATGCATCCATTGACTAAGATCCTACAGAATTGTGAGAAATACAAATGGGTCACCCTAAACTTTTCTTTTCTTCTTTTGATGCACTGGCTTAGATAGAGTTTACTGTAATCATAGAACATGAAATTTGTTGCATCAAATTACCAAGAGAAAGCTGATAGGCCATATCGATTTGACCTTGCACATTATTTGTCAATTCAGATATTCGAACATGACATTTATATGTTAATTGATATGAATACGATTTTTTCTATACCCCTAATACTTACCATTCCACAGGGATACTGCTGGACAAGAAAGATTTAGGAGTCTCATTCCAAGTTACATAAGAGACTCCTCTGTTGCAGTAGTAGTCTATGATGTATCTAGTTAGTACTCTCTCTGTATTTTCTTGATGCATTTTAGTTAGTTGTAGTTGATGTGCTTATAAACTTTGGTGTGAAAACGTTCATACGCAGATAGACAATCGTTCTTGAACACCACCAAGTGGATTGAGGAGGTACGAACAGAACGGGGTAGTGATGTGATCATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGGTGAGAAATGAATTTTTATAATGAACAAAATTGATATTTTTGAGAAAAAAATTGAGGAATAAACTGTAACCTTTATTTAGGATATACATTAGGATCAGTAGTGTACTTCGAAGATCAGTTGTAGAGTGATTGAATCTAAACTTTTTTGAGAAGGTTGGAGGCTGCGTTAGGGGCACGAGCTCTGTGTGCACTTTGTTTAAATTGATGAGAAGGGATTTGAGCTGATCTTAGTTGTTGTTGGCCTTCGATTGAATGTACCCAAGATCTACACTGACAATTCTTAACTCCTACGAAATTGTCAGGAAATTTTGAGCTTAGTTTCTATTTCATATTTATAAATGATGAATAGACTTCCCTAGTATGCGGGTATAGAGGAGCAAAGTTCTGACTCCCGGTTATCCAAAAAAAAATATAGACTTTGCTAGCGTCTATTGACACCCTTGTCCATATTTCAGAAGTTCTCTCTAAGTACTGTTTGTTTGGAGACAAATTCAGGCAAGTTTCAATCGAAGAAGGTGATGCCAAATCACGGGAGTTTGGAGTCATGTTTATAGAAACTAGTGCCAAAGCTGGGTTCAACATCAAGGTAACGTTATCTTATGATTTCTGAAACGTGAAACCACAAATCCAAAATCCCCCCTGTACCTTTCTGTTCTCAAAGCACGAAATTACGAATCCTCACTAAATTTGCAATAGTTTCTCTTCTTTGGTCGGTCTGTAGTAGTTTTGACTTAATTTGTATTGAAACAAATCTTGCAGCCTCTCTTTCGTAAGATTGCTGCAGCACTGCCAGGGATGGAAACTCTGTCATCAACAAGGCAGGAGGACATGGTTGACGTAAATTTGAAACCCGCAGTGAACTCATCCCAGACGGAACAGCAAGGAGGAGGTTGTGCATGCTAGATGATATGTAAGT

mRNA sequence

ATGGCGACGGTTTCTCCTCTCGCCAAGTACAAGCTCGTCTTCCTCGGCGATCAATCCGTTGGTAAAACCAGCATTATCACCCGCTTCATGTACGACAAGTTTGATACCACCTATCAGGCTACAATTGGAATTGACTTCTTGTCCAAAACAATGTACCTTGAAGATCGAACAATTCGGTTGCAGCTTTGGGATACTGCTGGACAAGAAAGATTTAGGAGTCTCATTCCAAGTTACATAAGAGACTCCTCTGTTGCAGTAGTAGTCTATGATGTATCTAATAGACAATCGTTCTTGAACACCACCAAGTGGATTGAGGAGGTACGAACAGAACGGGGTAGTGATGTGATCATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGGCAAGTTTCAATCGAAGAAGGTGATGCCAAATCACGGGAGTTTGGAGTCATGTTTATAGAAACTAGTGCCAAAGCTGGGTTCAACATCAAGCCTCTCTTTCGTAAGATTGCTGCAGCACTGCCAGGGATGGAAACTCTGTCATCAACAAGGCAGGAGGACATGGTTGACGTAAATTTGAAACCCGCAGTGAACTCATCCCAGACGGAACAGCAAGGAGGAGGTTGTGCATGCTAGATGATATGTAAGT

Coding sequence (CDS)

ATGGCGACGGTTTCTCCTCTCGCCAAGTACAAGCTCGTCTTCCTCGGCGATCAATCCGTTGGTAAAACCAGCATTATCACCCGCTTCATGTACGACAAGTTTGATACCACCTATCAGGCTACAATTGGAATTGACTTCTTGTCCAAAACAATGTACCTTGAAGATCGAACAATTCGGTTGCAGCTTTGGGATACTGCTGGACAAGAAAGATTTAGGAGTCTCATTCCAAGTTACATAAGAGACTCCTCTGTTGCAGTAGTAGTCTATGATGTATCTAATAGACAATCGTTCTTGAACACCACCAAGTGGATTGAGGAGGTACGAACAGAACGGGGTAGTGATGTGATCATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGGCAAGTTTCAATCGAAGAAGGTGATGCCAAATCACGGGAGTTTGGAGTCATGTTTATAGAAACTAGTGCCAAAGCTGGGTTCAACATCAAGCCTCTCTTTCGTAAGATTGCTGCAGCACTGCCAGGGATGGAAACTCTGTCATCAACAAGGCAGGAGGACATGGTTGACGTAAATTTGAAACCCGCAGTGAACTCATCCCAGACGGAACAGCAAGGAGGAGGTTGTGCATGCTAG

Homology

[Close]

BLAST of CmoCh03G008470 vs. Swiss-Prot
Match: RAH1E_ARATH (Ras-related protein RABH1e OS=Arabidopsis thaliana GN=RABH1E PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 8.0e-103
Identity = 188/207 (90.82%), Postives = 202/207 (97.58%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT+KWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGD K+R++GV+FIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLK + NS+Q EQQ GGCAC
Sbjct: 181 QEDMVDVNLKTSSNSAQGEQQRGGCAC 207

[Close]

BLAST of CmoCh03G008470 vs. Swiss-Prot
Match: RAH1D_ARATH (Ras-related protein RABH1d OS=Arabidopsis thaliana GN=RABH1D PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 7.5e-101
Identity = 185/207 (89.37%), Postives = 196/207 (94.69%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR SFLNT+KWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVEKRQVSIEEGD+K RE+GVMFIETSAKAGFNIKPLFRKIAAALPGME+ S+T+
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
            EDMVDVNLKP  NSSQ +QQGG C+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGACSC 207

[Close]

BLAST of CmoCh03G008470 vs. Swiss-Prot
Match: RAH1B_ARATH (Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.0e-97
Identity = 181/208 (87.02%), Postives = 195/208 (93.75%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV++RQSFLNTTKWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEE +AK+RE  VMFIETSAKAGFNIK LFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPA-VNSSQTEQQGGGCAC 208
           QEDMVDVNLK +  N+S  +QQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of CmoCh03G008470 vs. Swiss-Prot
Match: RAH1C_ARATH (Ras-related protein RABH1c OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.1e-90
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQ TIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA+VVYDVSNRQ+FLNT+KWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EG+ K +E+GVMFIETSAK  FNIK LFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TRQEDMVDVNLKPAVNSSQTEQQ-----GGGCAC 208
           T+ +DMVDVNLK   NSSQ EQQ     GGGC+C
Sbjct: 181 TKSDDMVDVNLKTTSNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of CmoCh03G008470 vs. Swiss-Prot
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3)

HSP 1 Score: 303.5 bits (776), Expect = 1.7e-81
Identity = 149/203 (73.40%), Postives = 175/203 (86.21%), Query Frame = 1


Query: 5   SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRLQLWD 64
           +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9   NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68

Query: 65  TAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLVGNKT 124
           TAGQERFRSLIPSYIRDS+VAVVVYD++N  SF  TTKWI++VRTERGSDVII+LVGNKT
Sbjct: 69  TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128

Query: 125 DLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTRQEDM 184
           DL +KRQVSIEEG+ K++E  VMFIETSAKAG+N+K LFR++AAALPGME+     +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188

Query: 185 VDVNLKPAVNSSQTEQQGGGCAC 208
           +D+ L+       +E   GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208

[Close]

BLAST of CmoCh03G008470 vs. TrEMBL
Match: A0A0A0KGR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500400 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.0e-109
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKPAVNSSQ+EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQSEQQGGGCAC 207

[Close]

BLAST of CmoCh03G008470 vs. TrEMBL
Match: I1K4J2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G178300 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-106
Identity = 197/207 (95.17%), Postives = 205/207 (99.03%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGDAKSREFG+MFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207

[Close]

BLAST of CmoCh03G008470 vs. TrEMBL
Match: A0A151S3B7_CAJCA (Ras-related protein RABH1B OS=Cajanus cajan GN=KK1_028995 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-106
Identity = 197/207 (95.17%), Postives = 205/207 (99.03%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGDAKSREFG+MFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207

[Close]

BLAST of CmoCh03G008470 vs. TrEMBL
Match: V7CN91_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G256300g PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-106
Identity = 197/207 (95.17%), Postives = 205/207 (99.03%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGDAKSREFG+MFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207

[Close]

BLAST of CmoCh03G008470 vs. TrEMBL
Match: I1KT12_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G135400 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.4e-106
Identity = 197/207 (95.17%), Postives = 205/207 (99.03%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVEKRQVSIEEGDAKSREFG+MFIETSAKAGFNIKPLFRKIAAALPGME+LSST+
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMESLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207

[Close]

BLAST of CmoCh03G008470 vs. TAIR10
Match: AT5G10260.1 (AT5G10260.1 RAB GTPase homolog H1E)

HSP 1 Score: 374.4 bits (960), Expect = 4.5e-104
Identity = 188/207 (90.82%), Postives = 202/207 (97.58%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT+KWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGD K+R++GV+FIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLK + NS+Q EQQ GGCAC
Sbjct: 181 QEDMVDVNLKTSSNSAQGEQQRGGCAC 207

[Close]

BLAST of CmoCh03G008470 vs. TAIR10
Match: AT2G22290.1 (AT2G22290.1 RAB GTPase homolog H1D)

HSP 1 Score: 367.9 bits (943), Expect = 4.2e-102
Identity = 185/207 (89.37%), Postives = 196/207 (94.69%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+NR SFLNT+KWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVEKRQVSIEEGD+K RE+GVMFIETSAKAGFNIKPLFRKIAAALPGME+ S+T+
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
            EDMVDVNLKP  NSSQ +QQGG C+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGACSC 207

[Close]

BLAST of CmoCh03G008470 vs. TAIR10
Match: AT2G44610.1 (AT2G44610.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 355.1 bits (910), Expect = 2.8e-98
Identity = 181/208 (87.02%), Postives = 195/208 (93.75%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV++RQSFLNTTKWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEE +AK+RE  VMFIETSAKAGFNIK LFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPA-VNSSQTEQQGGGCAC 208
           QEDMVDVNLK +  N+S  +QQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of CmoCh03G008470 vs. TAIR10
Match: AT4G39890.1 (AT4G39890.1 RAB GTPase homolog H1C)

HSP 1 Score: 333.2 bits (853), Expect = 1.2e-91
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MA+VSPLAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQ TIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA+VVYDVSNRQ+FLNT+KWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EG+ K +E+GVMFIETSAK  FNIK LFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TRQEDMVDVNLKPAVNSSQTEQQ-----GGGCAC 208
           T+ +DMVDVNLK   NSSQ EQQ     GGGC+C
Sbjct: 181 TKSDDMVDVNLKTTSNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of CmoCh03G008470 vs. TAIR10
Match: AT5G64990.2 (AT5G64990.2 RAB GTPase homolog H1A)

HSP 1 Score: 294.3 bits (752), Expect = 6.0e-80
Identity = 154/206 (74.76%), Postives = 173/206 (83.98%), Query Frame = 1


Query: 10  YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRLQLW------ 69
           YKLVFLGDQ VGKTSIIT FMY KFDT+YQATIGIDFLSKT   EDRT RLQLW      
Sbjct: 8   YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSL 67

Query: 70  -DTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLVGN 129
            DTAGQERF+SL+PSYIRDSSVAV+VYDV+++QSF+NT+KWIEEVR ERGS VIIVLVGN
Sbjct: 68  GDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGN 127

Query: 130 KTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTRQE 189
           KTDLV KRQVSIEEG+ K+REFG +F+ETSAKAGFNIKPLF KI +AL G E +S T+QE
Sbjct: 128 KTDLVNKRQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQE 187

Query: 190 DMVDVNLKPAVNSSQ-TEQQGGGCAC 208
           D+VDVNLKP + SSQ   QQ   C+C
Sbjct: 188 DLVDVNLKPLMFSSQANHQQESNCSC 213

[Close]

BLAST of CmoCh03G008470 vs. NCBI nr
Match: gi|449451431|ref|XP_004143465.1| (PREDICTED: ras-related protein RABH1e [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 5.8e-109
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKPAVNSSQ+EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQSEQQGGGCAC 207

[Close]

BLAST of CmoCh03G008470 vs. NCBI nr
Match: gi|356512701|ref|XP_003525055.1| (PREDICTED: ras-related protein RABH1e [Glycine max])

HSP 1 Score: 394.0 bits (1011), Expect = 1.6e-106
Identity = 197/207 (95.17%), Postives = 205/207 (99.03%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGDAKSREFG+MFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207

[Close]

BLAST of CmoCh03G008470 vs. NCBI nr
Match: gi|356525473|ref|XP_003531349.1| (PREDICTED: ras-related protein RABH1e [Glycine max])

HSP 1 Score: 393.7 bits (1010), Expect = 2.0e-106
Identity = 197/207 (95.17%), Postives = 205/207 (99.03%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLVEKRQVSIEEGDAKSREFG+MFIETSAKAGFNIKPLFRKIAAALPGME+LSST+
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMESLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207

[Close]

BLAST of CmoCh03G008470 vs. NCBI nr
Match: gi|1009145955|ref|XP_015890621.1| (PREDICTED: ras-related protein RABH1e [Ziziphus jujuba])

HSP 1 Score: 392.5 bits (1007), Expect = 4.6e-106
Identity = 197/207 (95.17%), Postives = 205/207 (99.03%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KWIEEVRTERG+DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWIEEVRTERGTDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGD+KSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDSKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VN+SQTEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPTVNTSQTEQQGGGCAC 207

[Close]

BLAST of CmoCh03G008470 vs. NCBI nr
Match: gi|920686733|gb|KOM30716.1| (hypothetical protein LR48_Vigan01g027000 [Vigna angularis])

HSP 1 Score: 392.1 bits (1006), Expect = 6.0e-106
Identity = 196/207 (94.69%), Postives = 204/207 (98.55%), Query Frame = 1


Query: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
           MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1   MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT KW+EEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
           GNKTDLV+KRQVSIEEGDAKSREFG+MFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKPAVNSSQTEQQGGGCAC 208
           QEDMVDVNLKP VNSSQ EQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQAEQQGGGCSC 207

The following BLAST results are available for this feature:

BLAST of CmoCh03G008470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAH1E_ARATH	8.0e-103	90.82	Ras-related protein RABH1e OS=Arabidopsis thaliana GN=RABH1E PE=2 SV=1	[more]
RAH1D_ARATH	7.5e-101	89.37	Ras-related protein RABH1d OS=Arabidopsis thaliana GN=RABH1D PE=3 SV=1	[more]
RAH1B_ARATH	5.0e-97	87.02	Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1	[more]
RAH1C_ARATH	2.1e-90	81.31	Ras-related protein RABH1c OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1	[more]
RAB6A_PONAB	1.7e-81	73.40	Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3	[more]

BLAST of CmoCh03G008470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGR9_CUCSA	4.0e-109	99.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500400 PE=4 SV=1	[more]
I1K4J2_SOYBN	1.1e-106	95.17	Uncharacterized protein OS=Glycine max GN=GLYMA_05G178300 PE=4 SV=1	[more]
A0A151S3B7_CAJCA	1.1e-106	95.17	Ras-related protein RABH1B OS=Cajanus cajan GN=KK1_028995 PE=4 SV=1	[more]
V7CN91_PHAVU	1.1e-106	95.17	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G256300g PE=4 SV=1	[more]
I1KT12_SOYBN	1.4e-106	95.17	Uncharacterized protein OS=Glycine max GN=GLYMA_08G135400 PE=4 SV=1	[more]

BLAST of CmoCh03G008470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10260.1	4.5e-104	90.82	RAB GTPase homolog H1E	[more]
AT2G22290.1	4.2e-102	89.37	RAB GTPase homolog H1D	[more]
AT2G44610.1	2.8e-98	87.02	Ras-related small GTP-binding family protein	[more]
AT4G39890.1	1.2e-91	81.31	RAB GTPase homolog H1C	[more]
AT5G64990.2	6.0e-80	74.76	RAB GTPase homolog H1A	[more]

BLAST of CmoCh03G008470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451431\|ref\|XP_004143465.1\|	5.8e-109	99.52	PREDICTED: ras-related protein RABH1e [Cucumis sativus]	[more]
gi\|356512701\|ref\|XP_003525055.1\|	1.6e-106	95.17	PREDICTED: ras-related protein RABH1e [Glycine max]	[more]
gi\|356525473\|ref\|XP_003531349.1\|	2.0e-106	95.17	PREDICTED: ras-related protein RABH1e [Glycine max]	[more]
gi\|1009145955\|ref\|XP_015890621.1\|	4.6e-106	95.17	PREDICTED: ras-related protein RABH1e [Ziziphus jujuba]	[more]
gi\|920686733\|gb\|KOM30716.1\|	6.0e-106	94.69	hypothetical protein LR48_Vigan01g027000 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0015992	proton transport
biological_process	GO:0008150	biological_process
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0015789	UDP-N-acetylgalactosamine transport
biological_process	GO:0015739	sialic acid transport
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:1990569	UDP-N-acetylglucosamine transmembrane transport
biological_process	GO:0010584	pollen exine formation
biological_process	GO:1903857	negative regulation of cytokinin dehydrogenase activity
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:1903070	negative regulation of ER-associated ubiquitin-dependent protein catabolic process
cellular_component	GO:0009536	plastid
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005351	sugar:proton symporter activity
molecular_function	GO:0015136	sialic acid transmembrane transporter activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005463	UDP-N-acetylgalactosamine transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G008470.1	CmoCh03G008470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 11..169 score: 5.2
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 9..166 score: 1.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 7..207 score: 4.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..184 score: 1.37
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 148..170 score: 7.4E-38coord: 51..73 score: 7.4E-38coord: 113..126 score: 7.4E-38coord: 33..49 score: 7.4E-38coord: 10..31 score: 7.4
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..207 score: 2.5E
None	No IPR available	PANTHER	PTHR24073:SF474	SUBFAMILY NOT NAMED	coord: 2..207 score: 2.5E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..173 score: 1.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 12..172 score: 1.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..173 score: 1.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 15..207 score: 1.
None	No IPR available	PROFILE	PS51419	RAB	coord: 1..207 score: 31

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G008470	Cucsa.104360	Cucumber (Gy14) v1	cgycmoB0227
CmoCh03G008470	CmaCh03G008060	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G008470	CmaCh07G005460	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G008470	Csa6G500400	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G008470	MELO3C007755	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G008470	ClCG01G018760	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G008470	CSPI06G30210	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G008470	Cp4.1LG10g01280	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G008470	Cp4.1LG19g09800	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G008470	MELO3C007755.2	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G008470	CsaV3_6G045420	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G008470	Cla97C01G018180	Watermelon (97103) v2	cmowmbB642
CmoCh03G008470	Bhi03G000905	Wax gourd	cmowgoB0792
CmoCh03G008470	CsGy6G029700	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G008470	Carg15991	Silver-seed gourd	carcmoB1028
CmoCh03G008470	Carg00698	Silver-seed gourd	carcmoB0551

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G008470	CmoCh07G005480	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G008470	Cucurbita maxima (Rimu)	cmacmoB727
CmoCh03G008470	Cucurbita maxima (Rimu)	cmacmoB784
CmoCh03G008470	Watermelon (Charleston Gray)	cmowcgB600
CmoCh03G008470	Watermelon (97103) v1	cmowmB609
CmoCh03G008470	Watermelon (97103) v1	cmowmB623
CmoCh03G008470	Cucurbita pepo (Zucchini)	cmocpeB639
CmoCh03G008470	Cucurbita pepo (Zucchini)	cmocpeB607
CmoCh03G008470	Cucurbita pepo (Zucchini)	cmocpeB613
CmoCh03G008470	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G008470	Bottle gourd (USVL1VR-Ls)	cmolsiB607
CmoCh03G008470	Silver-seed gourd	carcmoB0086
CmoCh03G008470	Watermelon (97103) v2	cmowmbB672
CmoCh03G008470	Wax gourd	cmowgoB0774
CmoCh03G008470	Cucurbita moschata (Rifu)	cmocmoB451
CmoCh03G008470	Cucurbita moschata (Rifu)	cmocmoB452