CmoCh03G007440 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATCAGAACTCGATTCAGTCGAAAACCCTAGAGAATGGCGCTTCACATGGGAAGCGCAATCCCATATACCAACCCTACGTTTATTGCTCTTCGATTCCTATACCAATCCTTCTCTTCAATGTCAGAATCTCAAGGTTCATCTCAATCTCCAGCAGTCCGTGGTTTGTGTGGCTTGGTTACAAGACCTCGAAATGTCCATTCGAGTTCCTATGCCTCCGGTTTTGGTCGACGCTGAGTCGCCTCTGAGTTTTAGAGCTTTCGAAGACCATATGGAGGTCAAGCTTGTCTTGCTTCTTCCGGTTGATCACCCTATCATTCTTAACTTCGACAATGTGCTGGACTTCTCCGAAAAGCGAGGACATAGAAACTCCAAGGCGTTGAAGCCACTTTCAATGGATTATGGTGCGCTGAAATTTTTAGAATTTTGCTCCGTGTCTTTTGATACTCGCTGCATTTTCCCTTATGCTGTCTAACAGTTATGCATTAACATTTGCTAAAGGTGCTAAATTTAAAACTTATATCCTTATGCTTTCTGTCTGCTTCTGACGTGTATGATCATTATCAAAGTGTGATAATTAATTACAATGCTAAATTGCCAGAAACATTGGATTTTCGCTATGTTAATCATTTACCATCTACTGTTTTTCCATTACCTTGTTAGCTTTCCTGTTCTGAAATGCTTGTGTTTCTTAGATCAAAGCAGTTTATCACGCAGTGGTGGCGTCCACTTTTATTGCAGAAATTGTTCTTTCAGGCTGAGTGA ATGCCATCAGAACTCGATTCAGTCGAAAACCCTAGAGAATGGCGCTTCACATGGGAAGCGCAATCCCATATACCAACCCTACGTTTATTGCTCTTCGATTCCTATACCAATCCTTCTCTTCAATGTCAGAATCTCAAGGTTCATCTCAATCTCCAGCAGTCCGTGGTTTGTGTGGCTTGGTTACAAGACCTCGAAATGTCCATTCGAGTTCCTATGCCTCCGGTTTTGGTCGACGCTGAGTCGCCTCTGAGTTTTAGAGCTTTCGAAGACCATATGGAGGTCAAGCTTGTCTTGCTTCTTCCGGTTGATCACCCTATCATTCTTAACTTCGACAATGTGCTGGACTTCTCCGAAAAGCGAGGACATAGAAACTCCAAGGCGTTGAAGCCACTTTCAATGGATTATGGTGCGCTGAAATTTTTAGAATTTTGCTCCGTATCAAAGCAGTTTATCACGCAGTGGTGGCGTCCACTTTTATTGCAGAAATTGTTCTTTCAGGCTGAGTGA ATGCCATCAGAACTCGATTCAGTCGAAAACCCTAGAGAATGGCGCTTCACATGGGAAGCGCAATCCCATATACCAACCCTACGTTTATTGCTCTTCGATTCCTATACCAATCCTTCTCTTCAATGTCAGAATCTCAAGGTTCATCTCAATCTCCAGCAGTCCGTGGTTTGTGTGGCTTGGTTACAAGACCTCGAAATGTCCATTCGAGTTCCTATGCCTCCGGTTTTGGTCGACGCTGAGTCGCCTCTGAGTTTTAGAGCTTTCGAAGACCATATGGAGGTCAAGCTTGTCTTGCTTCTTCCGGTTGATCACCCTATCATTCTTAACTTCGACAATGTGCTGGACTTCTCCGAAAAGCGAGGACATAGAAACTCCAAGGCGTTGAAGCCACTTTCAATGGATTATGGTGCGCTGAAATTTTTAGAATTTTGCTCCGTATCAAAGCAGTTTATCACGCAGTGGTGGCGTCCACTTTTATTGCAGAAATTGTTCTTTCAGGCTGAGTGA
BLAST of CmoCh03G007440 vs. TrEMBL
Match: A0A0A0KKI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504530 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 4.8e-60 Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = 1
BLAST of CmoCh03G007440 vs. TrEMBL
Match: M5VVH5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003533mg PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38 Identity = 78/133 (58.65%), Postives = 103/133 (77.44%), Query Frame = 1
BLAST of CmoCh03G007440 vs. TrEMBL
Match: A5C710_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002865 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.1e-38 Identity = 85/148 (57.43%), Postives = 106/148 (71.62%), Query Frame = 1
BLAST of CmoCh03G007440 vs. TrEMBL
Match: A0A0B0PUK1_GOSAR (Isoleucine--trna ligase OS=Gossypium arboreum GN=F383_09422 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 8.7e-38 Identity = 82/134 (61.19%), Postives = 105/134 (78.36%), Query Frame = 1
BLAST of CmoCh03G007440 vs. TrEMBL
Match: A0A061DFK5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000303 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 7.4e-37 Identity = 81/134 (60.45%), Postives = 103/134 (76.87%), Query Frame = 1
BLAST of CmoCh03G007440 vs. TAIR10
Match: AT3G26750.1 (AT3G26750.1 Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193)) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28 Identity = 65/144 (45.14%), Postives = 91/144 (63.19%), Query Frame = 1
BLAST of CmoCh03G007440 vs. NCBI nr
Match: gi|449464538|ref|XP_004149986.1| (PREDICTED: uncharacterized protein LOC101204887 [Cucumis sativus]) HSP 1 Score: 238.8 bits (608), Expect = 6.8e-60 Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = 1
BLAST of CmoCh03G007440 vs. NCBI nr
Match: gi|659080397|ref|XP_008440769.1| (PREDICTED: uncharacterized protein LOC103485086 [Cucumis melo]) HSP 1 Score: 237.7 bits (605), Expect = 1.5e-59 Identity = 113/134 (84.33%), Postives = 125/134 (93.28%), Query Frame = 1
BLAST of CmoCh03G007440 vs. NCBI nr
Match: gi|1009144628|ref|XP_015889905.1| (PREDICTED: uncharacterized protein LOC107424576 [Ziziphus jujuba]) HSP 1 Score: 177.6 bits (449), Expect = 1.9e-41 Identity = 89/145 (61.38%), Postives = 114/145 (78.62%), Query Frame = 1
BLAST of CmoCh03G007440 vs. NCBI nr
Match: gi|1009144753|ref|XP_015889972.1| (PREDICTED: uncharacterized protein LOC107424643, partial [Ziziphus jujuba]) HSP 1 Score: 177.6 bits (449), Expect = 1.9e-41 Identity = 89/145 (61.38%), Postives = 114/145 (78.62%), Query Frame = 1
BLAST of CmoCh03G007440 vs. NCBI nr
Match: gi|595817372|ref|XP_007204200.1| (hypothetical protein PRUPE_ppa003533mg [Prunus persica]) HSP 1 Score: 167.9 bits (424), Expect = 1.5e-38 Identity = 78/133 (58.65%), Postives = 103/133 (77.44%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |