CmoCh03G006430 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G006430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionThioredoxin reductase (1.8.1.9)
LocationCmo_Chr03 : 5866618 .. 5867797 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAAAACATGAATAGATTCTTAGGAGCTGCCGATGGATATAGGAAAAAATGTTCTTTAACCATTATAGGTTGGAGGCTAACAAGACAAGATAGGAAGCTCCTTTTATATGATTCTTCCTCCCCCTTGTGAAAATGCATTTCTGTAATCTCAAATTTTATGATCCAATGGGTTGATCTTTATAAGCCGCTGCTTTGATATATATAGATTTCTGATGGTTTTTCAATTTTCAACAGAGCCTGAGGAAACGAATGAACTCCTAAGCCTTATGATGATGGATAGGTTGGAAAGAAGCTCTTCGATTTTCTCGGAGGAGCTCGAAATTAAATCGGCGTAGCATCCATCACAGTTGCGGCGGCGTTTCATTCTTCCAGTCCTGCGAGTTCCGGTTCCAAAATCGCGGCCATGGACGATCTTGGTCTGCATCATCGTTAAGAAGCCCAGCCGTCCACACCGCCGCTATATACGCCGCTCGGGCGGAGCTGTGGCCGATCTTCTTCGAAGGATGGATGGCCAACAACATTGCGCCGGGCAGACAGCTCTCCATCACTACCGAGGTCGAGAATTTCCCCGGCTTCTCGAATGTCGTCCAGTGCCGCAATCAATCTCTCCCCGTTCCGGAACTCATTTTCTCGCCGGTTAATTTACACTAGAACTCGACGACGACTCAGAATTGACGGTGCCATACTCGCTTGAAGCAGATCGATTCGATTTCGCAGTCGACTCTCCAGCCACTTGATAATGGAGGTGGCGCCGCCGCCGCCGATCCGGTCGGAAAGAGTGAAAGAGGAGAGAAGGCGAGTCGGTTTAAAGCAGGAAAGGTGGGGGAGGAAATAAGAGAACGAAACGATAACAGAGTCTTATATTGTTTTTTTTTCAAATTGAACCGGTTCAACCTCAACCGATATCGGTTTGGGTTGGTTTAAACCGACCTTTTCAAGATAAATTTATTTATTTACAAAATTTAAAATCACAAATTAAATAAAAAAAGTTCAATATTTTATTCAATGAGACGCAAAATGAATTGGCGCCTAATTACGTCACGTCGGAAGAGCTTCAGACTCCACCTGTGAGGCTGATTTCCCTCGTCGGATGCCCCGACCTTCACCCCACCATTCTCCTCTCACCTTCTCTCCGATCCACACTCTTGCCTTCTCCGACCTCTCCAAGATCATAA

mRNA sequence

ATGAATGAAAACATGAATAGATTCTTAGGAGCTGCCGATGGATATAGGAAAAAATGTTCTTTAACCATTATAGGTTGGAAAGAAGCTCTTCGATTTTCTCGGAGGAGCTCGAAATTAAATCGGCGTAGCATCCATCACAGTTGCGGCGGCGTTTCATTCTTCCAGTCCTGCGAGTTCCGGTTCCAAAATCGCGGCCATGGACGATCTTGGTCTGCATCATCGTTAAGAAGCCCAGCCGTCCACACCGCCGCTATATACGCCGCTCGGGCGGAGCTGTGGCCGATCTTCTTCGAAGGATGGATGGCCAACAACATTGCGCCGGGCAGACAGCTCTCCATCACTACCGAGGTCGAGAATTTCCCCGGCTTCTCGAATGTCGTCCAGTGCCGCAATCAATCTCTCCCCGTTCCGGAACTCATTTTCTCGCCGATCGATTCGATTTCGCAGTCGACTCTCCAGCCACTTGATAATGGAGGTGGCGCCGCCGCCGCCGATCCGGTCGGAAAGAGTGAAAGAGGAGAGAAGGCGAGTCGGTTTAAAGCAGGAAAGACTCCACCTGTGAGGCTGATTTCCCTCGTCGGATGCCCCGACCTTCACCCCACCATTCTCCTCTCACCTTCTCTCCGATCCACACTCTTGCCTTCTCCGACCTCTCCAAGATCATAA

Coding sequence (CDS)

ATGAATGAAAACATGAATAGATTCTTAGGAGCTGCCGATGGATATAGGAAAAAATGTTCTTTAACCATTATAGGTTGGAAAGAAGCTCTTCGATTTTCTCGGAGGAGCTCGAAATTAAATCGGCGTAGCATCCATCACAGTTGCGGCGGCGTTTCATTCTTCCAGTCCTGCGAGTTCCGGTTCCAAAATCGCGGCCATGGACGATCTTGGTCTGCATCATCGTTAAGAAGCCCAGCCGTCCACACCGCCGCTATATACGCCGCTCGGGCGGAGCTGTGGCCGATCTTCTTCGAAGGATGGATGGCCAACAACATTGCGCCGGGCAGACAGCTCTCCATCACTACCGAGGTCGAGAATTTCCCCGGCTTCTCGAATGTCGTCCAGTGCCGCAATCAATCTCTCCCCGTTCCGGAACTCATTTTCTCGCCGATCGATTCGATTTCGCAGTCGACTCTCCAGCCACTTGATAATGGAGGTGGCGCCGCCGCCGCCGATCCGGTCGGAAAGAGTGAAAGAGGAGAGAAGGCGAGTCGGTTTAAAGCAGGAAAGACTCCACCTGTGAGGCTGATTTCCCTCGTCGGATGCCCCGACCTTCACCCCACCATTCTCCTCTCACCTTCTCTCCGATCCACACTCTTGCCTTCTCCGACCTCTCCAAGATCATAA
Homology
[Close]
BLAST of CmoCh03G006430 vs. Swiss-Prot
Match: TRXB1_ARATH (Thioredoxin reductase 1 OS=Arabidopsis thaliana GN=NTR1 PE=1 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-15
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF 124
           PA HTAAIYAARAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Sbjct: 60  PAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 105

[Close]
BLAST of CmoCh03G006430 vs. Swiss-Prot
Match: TRXB2_ARATH (Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF 124
           PA HTAAIYA+RAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Sbjct: 68  PAAHTAAIYASRAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 113

[Close]
BLAST of CmoCh03G006430 vs. Swiss-Prot
Match: NTRB_ORYSJ (Thioredoxin reductase NTRB OS=Oryza sativa subsp. japonica GN=NTRB PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 135
           P+ HTAAIYAARAEL P+ FEGW+AN+IA G QL+ TT+VENFPGF   +       +CR
Sbjct: 20  PSAHTAAIYAARAELKPVLFEGWLANDIAAGGQLTTTTDVENFPGFPEGILGGELMDRCR 79

[Close]
BLAST of CmoCh03G006430 vs. Swiss-Prot
Match: NTRA_ORYSJ (Thioredoxin reductase NTRA OS=Oryza sativa subsp. japonica GN=Os06g0327300 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.8e-13
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 135
           PA HTAA+YAARAEL P+ FEG++AN+IA G QL+ TT+VENFPGF + +       +CR
Sbjct: 57  PAAHTAAVYAARAELKPVLFEGFLANDIAAGGQLTTTTDVENFPGFPDGILGADLMDRCR 116

[Close]
BLAST of CmoCh03G006430 vs. Swiss-Prot
Match: TRXB_NEUCR (Thioredoxin reductase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cys-9 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF 124
           PA HTAAIY ARAEL P+ +EG+MAN IA G QL+ TTE+ENFPGF
Sbjct: 12  PAAHTAAIYLARAELKPVLYEGFMANGIAAGGQLTTTTEIENFPGF 57

[Close]
BLAST of CmoCh03G006430 vs. TrEMBL
Match: A0A0A0KH29_CUCSA (Thioredoxin reductase OS=Cucumis sativus GN=Csa_6G510230 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 50/72 (69.44%), Postives = 54/72 (75.00%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CR
Sbjct: 84  PAAHTAAIYAARAELGPILFEGWMANDIAPGGQLTTTTEVENFPGFSNGVLGMDLMDRCR 143

Query: 138 NQSLPVPELIFS 143
           NQSL     IF+
Sbjct: 144 NQSLRFGTQIFT 155

[Close]
BLAST of CmoCh03G006430 vs. TrEMBL
Match: A0A022R9F3_ERYGU (Thioredoxin reductase OS=Erythranthe guttata GN=MIMGU_mgv1a008628mg PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFS+ +       +CR
Sbjct: 59  PAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTTEVENFPGFSDGIGGIELMDKCR 118

Query: 138 NQSLPVPELIFS 143
            QSL     IF+
Sbjct: 119 AQSLRFGTQIFT 130

[Close]
BLAST of CmoCh03G006430 vs. TrEMBL
Match: A0A0A0L0X1_CUCSA (Thioredoxin reductase OS=Cucumis sativus GN=Csa_3G000140 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 45/64 (70.31%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 135
           PA HTAAIYAARAEL PI FEGWMANNIAPG QL+ TT+VENFPGF   +        CR
Sbjct: 78  PAAHTAAIYAARAELKPILFEGWMANNIAPGGQLTTTTDVENFPGFPEGILGIELMDHCR 137

[Close]
BLAST of CmoCh03G006430 vs. TrEMBL
Match: M5W964_PRUPE (Thioredoxin reductase OS=Prunus persica GN=PRUPE_ppa007040mg PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-15
Identity = 46/72 (63.89%), Postives = 53/72 (73.61%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TT+VENFPGF + +       +CR
Sbjct: 71  PAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGIMGGELMDRCR 130

Query: 138 NQSLPVPELIFS 143
           NQSL     IF+
Sbjct: 131 NQSLRFGTEIFT 142

[Close]
BLAST of CmoCh03G006430 vs. TrEMBL
Match: A0A0B0P1W9_GOSAR (Thioredoxin reductase OS=Gossypium arboreum GN=F383_22545 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-15
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ T++VENFPGF + +       +CR
Sbjct: 64  PAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPDGIMGSELMERCR 123

Query: 138 NQSLPVPELIFS-PIDSISQST 152
           NQSL     IF+  +D +  S+
Sbjct: 124 NQSLRFGTTIFTETVDKVDFSS 145

[Close]
BLAST of CmoCh03G006430 vs. TAIR10
Match: AT4G35460.1 (AT4G35460.1 NADPH-dependent thioredoxin reductase B)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF 124
           PA HTAAIYAARAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Sbjct: 60  PAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 105

[Close]
BLAST of CmoCh03G006430 vs. TAIR10
Match: AT2G17420.1 (AT2G17420.1 NADPH-dependent thioredoxin reductase A)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-16
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF 124
           PA HTAAIYA+RAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Sbjct: 63  PAAHTAAIYASRAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 108

[Close]
BLAST of CmoCh03G006430 vs. TAIR10
Match: AT2G41680.1 (AT2G41680.1 NADPH-dependent thioredoxin reductase C)

HSP 1 Score: 61.2 bits (147), Expect = 9.1e-10
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF 124
           PA +TAAIYAARA L P+ FEG+    + PG QL  TTEVENFPGF
Sbjct: 93  PAGYTAAIYAARANLKPVVFEGYQMGGV-PGGQLMTTTEVENFPGF 137

[Close]
BLAST of CmoCh03G006430 vs. NCBI nr
Match: gi|778719978|ref|XP_004134997.2| (PREDICTED: thioredoxin reductase NTRB-like [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 4.2e-17
Identity = 50/72 (69.44%), Postives = 54/72 (75.00%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CR
Sbjct: 84  PAAHTAAIYAARAELGPILFEGWMANDIAPGGQLTTTTEVENFPGFSNGVLGMDLMDRCR 143

Query: 138 NQSLPVPELIFS 143
           NQSL     IF+
Sbjct: 144 NQSLRFGTQIFT 155

[Close]
BLAST of CmoCh03G006430 vs. NCBI nr
Match: gi|659080702|ref|XP_008440934.1| (PREDICTED: thioredoxin reductase NTRB-like [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 4.2e-17
Identity = 50/72 (69.44%), Postives = 54/72 (75.00%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CR
Sbjct: 70  PAAHTAAIYAARAELGPILFEGWMANDIAPGGQLTTTTEVENFPGFSNGVLGMDLMDRCR 129

Query: 138 NQSLPVPELIFS 143
           NQSL     IF+
Sbjct: 130 NQSLRFGTQIFT 141

[Close]
BLAST of CmoCh03G006430 vs. NCBI nr
Match: gi|659095183|ref|XP_008448444.1| (PREDICTED: thioredoxin reductase NTRB [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 8.0e-16
Identity = 47/72 (65.28%), Postives = 52/72 (72.22%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMANNIAPG QL+ TT+VENFPGF   +       +CR
Sbjct: 75  PAAHTAAIYAARAELKPILFEGWMANNIAPGGQLTTTTDVENFPGFPEGILGIELMDRCR 134

Query: 138 NQSLPVPELIFS 143
           NQSL     I+S
Sbjct: 135 NQSLRFGTQIYS 146

[Close]
BLAST of CmoCh03G006430 vs. NCBI nr
Match: gi|449456891|ref|XP_004146182.1| (PREDICTED: thioredoxin reductase NTRB [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-15
Identity = 45/64 (70.31%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 135
           PA HTAAIYAARAEL PI FEGWMANNIAPG QL+ TT+VENFPGF   +        CR
Sbjct: 78  PAAHTAAIYAARAELKPILFEGWMANNIAPGGQLTTTTDVENFPGFPEGILGIELMDHCR 137

[Close]
BLAST of CmoCh03G006430 vs. NCBI nr
Match: gi|848876651|ref|XP_012838782.1| (PREDICTED: thioredoxin reductase NTRB-like [Erythranthe guttata])

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-15
Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 1 

Query: 78  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCR 137
           PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFS+ +       +CR
Sbjct: 59  PAAHTAAIYAARAELKPILFEGWMANDIAPGGQLTTTTEVENFPGFSDGIGGIELMDKCR 118

Query: 138 NQSLPVPELIFS 143
            QSL     IF+
Sbjct: 119 AQSLRFGTQIFT 130

The following BLAST results are available for this feature:
BLAST of CmoCh03G006430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXB1_ARATH5.2e-1580.43Thioredoxin reductase 1 OS=Arabidopsis thaliana GN=NTR1 PE=1 SV=3[more]
TRXB2_ARATH1.1e-1478.26Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2[more]
NTRB_ORYSJ2.0e-1460.94Thioredoxin reductase NTRB OS=Oryza sativa subsp. japonica GN=NTRB PE=2 SV=1[more]
NTRA_ORYSJ2.8e-1357.81Thioredoxin reductase NTRA OS=Oryza sativa subsp. japonica GN=Os06g0327300 PE=3 ... [more]
TRXB_NEUCR3.1e-1271.74Thioredoxin reductase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS... [more]
BLAST of CmoCh03G006430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH29_CUCSA2.9e-1769.44Thioredoxin reductase OS=Cucumis sativus GN=Csa_6G510230 PE=3 SV=1[more]
A0A022R9F3_ERYGU1.6e-1565.28Thioredoxin reductase OS=Erythranthe guttata GN=MIMGU_mgv1a008628mg PE=3 SV=1[more]
A0A0A0L0X1_CUCSA1.6e-1570.31Thioredoxin reductase OS=Cucumis sativus GN=Csa_3G000140 PE=3 SV=1[more]
M5W964_PRUPE2.1e-1563.89Thioredoxin reductase OS=Prunus persica GN=PRUPE_ppa007040mg PE=3 SV=1[more]
A0A0B0P1W9_GOSAR2.8e-1557.32Thioredoxin reductase OS=Gossypium arboreum GN=F383_22545 PE=3 SV=1[more]
BLAST of CmoCh03G006430 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35460.12.9e-1680.43 NADPH-dependent thioredoxin reductase B[more]
AT2G17420.16.5e-1678.26 NADPH-dependent thioredoxin reductase A[more]
AT2G41680.19.1e-1065.22 NADPH-dependent thioredoxin reductase C[more]
BLAST of CmoCh03G006430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778719978|ref|XP_004134997.2|4.2e-1769.44PREDICTED: thioredoxin reductase NTRB-like [Cucumis sativus][more]
gi|659080702|ref|XP_008440934.1|4.2e-1769.44PREDICTED: thioredoxin reductase NTRB-like [Cucumis melo][more]
gi|659095183|ref|XP_008448444.1|8.0e-1665.28PREDICTED: thioredoxin reductase NTRB [Cucumis melo][more]
gi|449456891|ref|XP_004146182.1|2.3e-1570.31PREDICTED: thioredoxin reductase NTRB [Cucumis sativus][more]
gi|848876651|ref|XP_012838782.1|2.3e-1565.28PREDICTED: thioredoxin reductase NTRB-like [Erythranthe guttata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000103Pyridine_nuc-diS_OxRdtase_2
IPR023753FAD/NAD-binding_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0006206 pyrimidine nucleobase metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004791 thioredoxin-disulfide reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G006430.1CmoCh03G006430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-IIPRINTSPR00469PNDRDTASEIIcoord: 108..123
score: 3.5E-7coord: 70..92
score: 3.
IPR023753FAD/NAD(P)-binding domainGENE3DG3DSA:3.50.50.60coord: 77..123
score: 3.
NoneNo IPR availablePANTHERPTHR22912DISULFIDE OXIDOREDUCTASEcoord: 78..134
score: 1.7
NoneNo IPR availablePANTHERPTHR22912:SF183SUBFAMILY NOT NAMEDcoord: 78..134
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh03G006430Lsi01G005220Bottle gourd (USVL1VR-Ls)cmolsiB582
CmoCh03G006430Lsi07G010370Bottle gourd (USVL1VR-Ls)cmolsiB605
CmoCh03G006430Cp4.1LG14g10600Cucurbita pepo (Zucchini)cmocpeB608
CmoCh03G006430Cp4.1LG19g08220Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G006430MELO3C013707.2Melon (DHL92) v3.6.1cmomedB682
CmoCh03G006430MELO3C007984.2Melon (DHL92) v3.6.1cmomedB694
CmoCh03G006430CsaV3_3G000140Cucumber (Chinese Long) v3cmocucB0769
CmoCh03G006430CsaV3_6G047950Cucumber (Chinese Long) v3cmocucB0793
CmoCh03G006430Cla97C01G020550Watermelon (97103) v2cmowmbB642
CmoCh03G006430Cla97C10G184650Watermelon (97103) v2cmowmbB645
CmoCh03G006430Bhi03G000556Wax gourdcmowgoB0781
CmoCh03G006430CsGy6G032180Cucumber (Gy14) v2cgybcmoB811
CmoCh03G006430CsGy3G000090Cucumber (Gy14) v2cgybcmoB380
CmoCh03G006430Carg07907Silver-seed gourdcarcmoB0886
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh03G006430CmoCh07G003710Cucurbita moschata (Rifu)cmocmoB455
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G006430Cucumber (Gy14) v1cgycmoB0042
CmoCh03G006430Cucurbita maxima (Rimu)cmacmoB653
CmoCh03G006430Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G006430Wild cucumber (PI 183967)cmocpiB681
CmoCh03G006430Cucumber (Chinese Long) v2cmocuB670
CmoCh03G006430Melon (DHL92) v3.5.1cmomeB605
CmoCh03G006430Watermelon (Charleston Gray)cmowcgB575
CmoCh03G006430Watermelon (97103) v1cmowmB623
CmoCh03G006430Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G006430Silver-seed gourdcarcmoB0551