CmoCh03G006200 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGAGGATGGACCTTCCTTCATTGAGTCACTGTCTCTTTCCAACCACACCCATCCCACTTTTTCCCTCTTTAATCAGTCCACATGGCAGCAAAGTCAGGTACCCCTCACAAAGATACTAAATTCATCGTGGATCTCTCTTTAATTTCGCATTGCTTTTACTTTTCAAACATGCTTGTCCAAATCATTTACTCCCGTCAAACTAAAACTCACTATGGGCCACCATCCACGACTGTTTCTAGTCAAAATCTCGCTCTCCCAGACCATCATTTTTCCCTTTCCCTTTGAAACTGGTTCTTTTTATCACTCCGCCCTTCAACTGTTTGACGAAATGACACCCTTCACCAACCCATAATAACCCTTTATTTTCCTTTCAAACCTCACTTGCCTGGTTCTTGGTTAAGCCCTCTTCCATCTCTGCCTCTTTCTCTGAGTGGTATCTTCTTTACTTTCGTTTTGATTTCTGGGGTTTTTGGGGTTTTCCCTTTTCTTGTTTCTGTGAACTTGTGTAGATGTACTCAGATCGCTCTGTATAGATGCAAGAAATGGTTGAAATGTGGTTCTTTGGTCGTTTGATTTAATGGGCACAAATGTTTGGTCATTTATTTTACTTTAAAATCCATCATCTTGGCTTTTAATTGCAGCTTTTCTGGTGCTTCTACACGTTTTGAAGCTACCCTGTTATACGCTTCTTGTTAGTTGGATGCTGCCATTGCTATGGAAAGTGAATCAACTAGCGAGAGGTTGGGATTGCTTAAAGTGCTTGTGATTCAAGGGAAGAAACTAGTAATTCGTGATTTCAAGAGCAGCGATCCTTATGTTGTTGTCAAGTTGGGCAATCAGGTCATTTCTTGTCTTGCCTTCTTCTATCACCCTTGTGCTCTGATGTGGTTTGTTAAATAATTTTGTTTCATTACATTGTTTCTCAGACAGCCAAGACCAAAGTTATCAATAGCTGCCTTAACCCTGTTTGGAATGAAGAGCTGAGCTTCTCCCTCACCCAACCTGTCAAAGATCTGACATTAGTAAGATTCTGCTTGTCAGTTTTTTGACCTATTGTTGTCTGTGTTCATTGAGATAGTCCCTGTTCTCATTTTCTCCGTTGCTCATCCATTGCCTTTTTCTCCAAAGTTGCATAACTTTGAATTGATATCTTCCATTAGGCCGTAATGAATTATACAGATTGTCTCCATCAGGCTGTAATGATTTGTACATAAGCAAGGATTTTGGTTATGCAAAAGAAGTGTGGTTATGATGGCTTATTTCAATATGGGAATTCATTAATACCATTACAAGTATTAAACTAATTGTGGTCAGTGAAAAGTGCATATTGTTTTGCTAGCTAGGCTATCTTATGTTTGTGTTATCAAAGTTCCCTGTGGATCCCACGTCGGTTGGAGATCAGAACAAAACATTTCTTATAACGGTGTGAAAACATTTTCCTAGCAAACACGTTTTAAACCTTGAGGGGAAACTCTGGAAGGGAAAACTCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGGTGTTACAAATGATATCAGAGCTAGGCATTGAGTGATGTGTCAGCGAGGACGTTGGGCTCTCGAGGAGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGGATGAAACATTCCTTATAAAGGTGTGGAAAGCTCTCTCTAGCAGACACGTTTTAAAACCTTGAAGGAAAGCCCTTGAAGGGAAAACCCAAAAAAGACAATATCTGCTAGCGGTGGGCTTAGACTGTCACAAAGGAAAAAAAAAGTTCTGGATTGTTCATTCGTCTTTGCGTATAGTCTTATATCATACTCTATAGCTCGGTATTCTGATCTATTCCTGGGACTGAAGTACTCGAAATGAAATTAGAACAATGTTTGATGATTTCTTGTTTCAGAAAGAAGAAACTACGGATCATTTATTTTTGTGGGAGTAAACAACACATCCTCTAGTATGAATAACTCAAAGCAACAAAAAATTTACGTTCTTTCTGCAGGAAGTGTTTGACAAAGATCGGTTCAAGTCAGATGACAAGATGGGACATGCCGAGCTGAGTCTTAAACCGATAGTTTCGGCTGCTCGATTGAGACGGGCTCTTGGAATTTCATTGGGGGCAACAATGTTAAGAAAGGTTACTCCAGACACTGATAACTGCCTAGCAAGGGACAGCAGCATTAGTTGCATGGAGGGAGGGGGCGTAACACAGAGCGTTTGGTTGAAGCTTCGTGACGTAGAATCTGGTGAAATAGAGCTAAAGATCAAGTTCATCGATCAACCTGGTCGGCCGTCCAGATAAAGATTACGGGAAGTTCTCGGCCTCGAGTTATGGGGTAGCCTGTAAATTGCTTCCATTTCCATAGTTTTGATCTGTCTGCAGCCTACTGTTTCAAGTGATTACGAGTAGAATGAGGCAGGTTTAGTGTCTGAAGCTTGTGTTAGTGTGTGCTTGGTGGGTTTTTCATGGGAATGGATATAGTGAATAGGCTTGGAAAGTCCATTCTCGTAGTTGGATAATATTATAGACATGGATAATTGACCATCATCCTTCATCCTCTCTCAGAAATTCGTTAGATAATAAAAACTAAAATAGACATTTTCATCTCCTTTTAACTTGTTGATAACCCTTCGAACCGTTTTGTTCGTCGTTTTGTATGTTGGATCAACCTCCCAGTCGTTGATCTTATACGTTGGACCGATTTTCTCTTACACGTGTTTTATTTGAAG ATGGTGGAGGATGGACCTTCCTTCATTGAGTCACTGTCTCTTTCCAACCACACCCATCCCACTTTTTCCCTCTTTAATCAGTCCACATGGCAGCAAAGTCAGTTGGATGCTGCCATTGCTATGGAAAGTGAATCAACTAGCGAGAGGTTGGGATTGCTTAAAGTGCTTGTGATTCAAGGGAAGAAACTAGTAATTCGTGATTTCAAGAGCAGCGATCCTTATGTTGTTGTCAAGTTGGGCAATCAGACAGCCAAGACCAAAGTTATCAATAGCTGCCTTAACCCTGTTTGGAATGAAGAGCTGAGCTTCTCCCTCACCCAACCTGTCAAAGATCTGACATTAGAAGTGTTTGACAAAGATCGGTTCAAGTCAGATGACAAGATGGGACATGCCGAGCTGAGTCTTAAACCGATAGTTTCGGCTGCTCGATTGAGACGGGCTCTTGGAATTTCATTGGGGGCAACAATGTTAAGAAAGGTTACTCCAGACACTGATAACTGCCTAGCAAGGGACAGCAGCATTAGTTGCATGGAGGGAGGGGGCGTAACACAGAGCGTTTGGTTGAAGCTTCGTGACGTAGAATCTGGTGAAATAGAGCTAAAGATCAAGTTCATCGATCAACCTGGTCGGCCGTCCAGATAAAGATTACGGGAAGTTCTCGGCCTCGAGTTATGGGGTAGCCTGTAAATTGCTTCCATTTCCATAGTTTTGATCTGTCTGCAGCCTACTGTTTCAAGTGATTACGAGTAGAATGAGGCAGGTTTAGTGTCTGAAGCTTGTGTTAGTGTGTGCTTGGTGGGTTTTTCATGGGAATGGATATAGTGAATAGGCTTGGAAAGTCCATTCTCGTAGTTGGATAATATTATAGACATGGATAATTGACCATCATCCTTCATCCTCTCTCAGAAATTCGTTAGATAATAAAAACTAAAATAGACATTTTCATCTCCTTTTAACTTGTTGATAACCCTTCGAACCGTTTTGTTCGTCGTTTTGTATGTTGGATCAACCTCCCAGTCGTTGATCTTATACGTTGGACCGATTTTCTCTTACACGTGTTTTATTTGAAG ATGGTGGAGGATGGACCTTCCTTCATTGAGTCACTGTCTCTTTCCAACCACACCCATCCCACTTTTTCCCTCTTTAATCAGTCCACATGGCAGCAAAGTCAGTTGGATGCTGCCATTGCTATGGAAAGTGAATCAACTAGCGAGAGGTTGGGATTGCTTAAAGTGCTTGTGATTCAAGGGAAGAAACTAGTAATTCGTGATTTCAAGAGCAGCGATCCTTATGTTGTTGTCAAGTTGGGCAATCAGACAGCCAAGACCAAAGTTATCAATAGCTGCCTTAACCCTGTTTGGAATGAAGAGCTGAGCTTCTCCCTCACCCAACCTGTCAAAGATCTGACATTAGAAGTGTTTGACAAAGATCGGTTCAAGTCAGATGACAAGATGGGACATGCCGAGCTGAGTCTTAAACCGATAGTTTCGGCTGCTCGATTGAGACGGGCTCTTGGAATTTCATTGGGGGCAACAATGTTAAGAAAGGTTACTCCAGACACTGATAACTGCCTAGCAAGGGACAGCAGCATTAGTTGCATGGAGGGAGGGGGCGTAACACAGAGCGTTTGGTTGAAGCTTCGTGACGTAGAATCTGGTGAAATAGAGCTAAAGATCAAGTTCATCGATCAACCTGGTCGGCCGTCCAGATAA
BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: CAR11_ARATH (Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana GN=CAR11 PE=1 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.0e-60 Identity = 116/162 (71.60%), Postives = 137/162 (84.57%), Query Frame = 1
BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: GAP1_ORYSI (GTPase activating protein 1 OS=Oryza sativa subsp. indica GN=OsI_07012 PE=3 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 9.6e-35 Identity = 76/160 (47.50%), Postives = 112/160 (70.00%), Query Frame = 1
BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: GAP1_ORYSJ (GTPase activating protein 1 OS=Oryza sativa subsp. japonica GN=GAP1 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 9.6e-35 Identity = 76/160 (47.50%), Postives = 112/160 (70.00%), Query Frame = 1
BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: CAR3_ARATH (Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana GN=CAR3 PE=3 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.3e-33 Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1
BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: CAR4_ARATH (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana GN=CAR4 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32 Identity = 75/173 (43.35%), Postives = 109/173 (63.01%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TrEMBL
Match: A0A0A0KHP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511000 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.6e-84 Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TrEMBL
Match: B9T578_RICCO (ARF GTPase activator, putative OS=Ricinus communis GN=RCOM_1065460 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 5.8e-63 Identity = 125/166 (75.30%), Postives = 145/166 (87.35%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TrEMBL
Match: D7TRX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0531g00030 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 4.2e-61 Identity = 121/164 (73.78%), Postives = 138/164 (84.15%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TrEMBL
Match: B9HC25_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00650g PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 7.1e-61 Identity = 123/166 (74.10%), Postives = 142/166 (85.54%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TrEMBL
Match: W9QNM0_9ROSA (Putative ADP-ribosylation factor GTPase-activating protein AGD13 OS=Morus notabilis GN=L484_010622 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 7.1e-61 Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TAIR10
Match: AT5G47710.1 (AT5G47710.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 234.6 bits (597), Expect = 5.8e-62 Identity = 116/162 (71.60%), Postives = 137/162 (84.57%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TAIR10
Match: AT1G73580.1 (AT1G73580.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 142.5 bits (358), Expect = 3.0e-34 Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TAIR10
Match: AT3G17980.1 (AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 140.2 bits (352), Expect = 1.5e-33 Identity = 75/173 (43.35%), Postives = 109/173 (63.01%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TAIR10
Match: AT1G66360.1 (AT1G66360.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 137.9 bits (346), Expect = 7.3e-33 Identity = 69/160 (43.12%), Postives = 105/160 (65.62%), Query Frame = 1
BLAST of CmoCh03G006200 vs. TAIR10
Match: AT1G70790.2 (AT1G70790.2 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 137.5 bits (345), Expect = 9.6e-33 Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 1
BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|449434048|ref|XP_004134808.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucumis sativus]) HSP 1 Score: 318.9 bits (816), Expect = 6.6e-84 Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 1
BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|659080778|ref|XP_008440974.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucumis melo]) HSP 1 Score: 312.8 bits (800), Expect = 4.7e-82 Identity = 158/167 (94.61%), Postives = 161/167 (96.41%), Query Frame = 1
BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|255585404|ref|XP_002533397.1| (PREDICTED: protein C2-DOMAIN ABA-RELATED 11 [Ricinus communis]) HSP 1 Score: 248.8 bits (634), Expect = 8.4e-63 Identity = 125/166 (75.30%), Postives = 145/166 (87.35%), Query Frame = 1
BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|225469943|ref|XP_002275013.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Vitis vinifera]) HSP 1 Score: 242.7 bits (618), Expect = 6.0e-61 Identity = 121/164 (73.78%), Postives = 138/164 (84.15%), Query Frame = 1
BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|703066277|ref|XP_010087670.1| (putative ADP-ribosylation factor GTPase-activating protein AGD13 [Morus notabilis]) HSP 1 Score: 241.9 bits (616), Expect = 1.0e-60 Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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