CmoCh03G006200 (gene) Cucurbita moschata (Rifu)

NameCmoCh03G006200
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalcium-dependent lipid-binding (CaLB domain) family protein
LocationCmo_Chr03 : 5772936 .. 5775667 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAGGATGGACCTTCCTTCATTGAGTCACTGTCTCTTTCCAACCACACCCATCCCACTTTTTCCCTCTTTAATCAGTCCACATGGCAGCAAAGTCAGGTACCCCTCACAAAGATACTAAATTCATCGTGGATCTCTCTTTAATTTCGCATTGCTTTTACTTTTCAAACATGCTTGTCCAAATCATTTACTCCCGTCAAACTAAAACTCACTATGGGCCACCATCCACGACTGTTTCTAGTCAAAATCTCGCTCTCCCAGACCATCATTTTTCCCTTTCCCTTTGAAACTGGTTCTTTTTATCACTCCGCCCTTCAACTGTTTGACGAAATGACACCCTTCACCAACCCATAATAACCCTTTATTTTCCTTTCAAACCTCACTTGCCTGGTTCTTGGTTAAGCCCTCTTCCATCTCTGCCTCTTTCTCTGAGTGGTATCTTCTTTACTTTCGTTTTGATTTCTGGGGTTTTTGGGGTTTTCCCTTTTCTTGTTTCTGTGAACTTGTGTAGATGTACTCAGATCGCTCTGTATAGATGCAAGAAATGGTTGAAATGTGGTTCTTTGGTCGTTTGATTTAATGGGCACAAATGTTTGGTCATTTATTTTACTTTAAAATCCATCATCTTGGCTTTTAATTGCAGCTTTTCTGGTGCTTCTACACGTTTTGAAGCTACCCTGTTATACGCTTCTTGTTAGTTGGATGCTGCCATTGCTATGGAAAGTGAATCAACTAGCGAGAGGTTGGGATTGCTTAAAGTGCTTGTGATTCAAGGGAAGAAACTAGTAATTCGTGATTTCAAGAGCAGCGATCCTTATGTTGTTGTCAAGTTGGGCAATCAGGTCATTTCTTGTCTTGCCTTCTTCTATCACCCTTGTGCTCTGATGTGGTTTGTTAAATAATTTTGTTTCATTACATTGTTTCTCAGACAGCCAAGACCAAAGTTATCAATAGCTGCCTTAACCCTGTTTGGAATGAAGAGCTGAGCTTCTCCCTCACCCAACCTGTCAAAGATCTGACATTAGTAAGATTCTGCTTGTCAGTTTTTTGACCTATTGTTGTCTGTGTTCATTGAGATAGTCCCTGTTCTCATTTTCTCCGTTGCTCATCCATTGCCTTTTTCTCCAAAGTTGCATAACTTTGAATTGATATCTTCCATTAGGCCGTAATGAATTATACAGATTGTCTCCATCAGGCTGTAATGATTTGTACATAAGCAAGGATTTTGGTTATGCAAAAGAAGTGTGGTTATGATGGCTTATTTCAATATGGGAATTCATTAATACCATTACAAGTATTAAACTAATTGTGGTCAGTGAAAAGTGCATATTGTTTTGCTAGCTAGGCTATCTTATGTTTGTGTTATCAAAGTTCCCTGTGGATCCCACGTCGGTTGGAGATCAGAACAAAACATTTCTTATAACGGTGTGAAAACATTTTCCTAGCAAACACGTTTTAAACCTTGAGGGGAAACTCTGGAAGGGAAAACTCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGGTGTTACAAATGATATCAGAGCTAGGCATTGAGTGATGTGTCAGCGAGGACGTTGGGCTCTCGAGGAGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGGATGAAACATTCCTTATAAAGGTGTGGAAAGCTCTCTCTAGCAGACACGTTTTAAAACCTTGAAGGAAAGCCCTTGAAGGGAAAACCCAAAAAAGACAATATCTGCTAGCGGTGGGCTTAGACTGTCACAAAGGAAAAAAAAAGTTCTGGATTGTTCATTCGTCTTTGCGTATAGTCTTATATCATACTCTATAGCTCGGTATTCTGATCTATTCCTGGGACTGAAGTACTCGAAATGAAATTAGAACAATGTTTGATGATTTCTTGTTTCAGAAAGAAGAAACTACGGATCATTTATTTTTGTGGGAGTAAACAACACATCCTCTAGTATGAATAACTCAAAGCAACAAAAAATTTACGTTCTTTCTGCAGGAAGTGTTTGACAAAGATCGGTTCAAGTCAGATGACAAGATGGGACATGCCGAGCTGAGTCTTAAACCGATAGTTTCGGCTGCTCGATTGAGACGGGCTCTTGGAATTTCATTGGGGGCAACAATGTTAAGAAAGGTTACTCCAGACACTGATAACTGCCTAGCAAGGGACAGCAGCATTAGTTGCATGGAGGGAGGGGGCGTAACACAGAGCGTTTGGTTGAAGCTTCGTGACGTAGAATCTGGTGAAATAGAGCTAAAGATCAAGTTCATCGATCAACCTGGTCGGCCGTCCAGATAAAGATTACGGGAAGTTCTCGGCCTCGAGTTATGGGGTAGCCTGTAAATTGCTTCCATTTCCATAGTTTTGATCTGTCTGCAGCCTACTGTTTCAAGTGATTACGAGTAGAATGAGGCAGGTTTAGTGTCTGAAGCTTGTGTTAGTGTGTGCTTGGTGGGTTTTTCATGGGAATGGATATAGTGAATAGGCTTGGAAAGTCCATTCTCGTAGTTGGATAATATTATAGACATGGATAATTGACCATCATCCTTCATCCTCTCTCAGAAATTCGTTAGATAATAAAAACTAAAATAGACATTTTCATCTCCTTTTAACTTGTTGATAACCCTTCGAACCGTTTTGTTCGTCGTTTTGTATGTTGGATCAACCTCCCAGTCGTTGATCTTATACGTTGGACCGATTTTCTCTTACACGTGTTTTATTTGAAG

mRNA sequence

ATGGTGGAGGATGGACCTTCCTTCATTGAGTCACTGTCTCTTTCCAACCACACCCATCCCACTTTTTCCCTCTTTAATCAGTCCACATGGCAGCAAAGTCAGTTGGATGCTGCCATTGCTATGGAAAGTGAATCAACTAGCGAGAGGTTGGGATTGCTTAAAGTGCTTGTGATTCAAGGGAAGAAACTAGTAATTCGTGATTTCAAGAGCAGCGATCCTTATGTTGTTGTCAAGTTGGGCAATCAGACAGCCAAGACCAAAGTTATCAATAGCTGCCTTAACCCTGTTTGGAATGAAGAGCTGAGCTTCTCCCTCACCCAACCTGTCAAAGATCTGACATTAGAAGTGTTTGACAAAGATCGGTTCAAGTCAGATGACAAGATGGGACATGCCGAGCTGAGTCTTAAACCGATAGTTTCGGCTGCTCGATTGAGACGGGCTCTTGGAATTTCATTGGGGGCAACAATGTTAAGAAAGGTTACTCCAGACACTGATAACTGCCTAGCAAGGGACAGCAGCATTAGTTGCATGGAGGGAGGGGGCGTAACACAGAGCGTTTGGTTGAAGCTTCGTGACGTAGAATCTGGTGAAATAGAGCTAAAGATCAAGTTCATCGATCAACCTGGTCGGCCGTCCAGATAAAGATTACGGGAAGTTCTCGGCCTCGAGTTATGGGGTAGCCTGTAAATTGCTTCCATTTCCATAGTTTTGATCTGTCTGCAGCCTACTGTTTCAAGTGATTACGAGTAGAATGAGGCAGGTTTAGTGTCTGAAGCTTGTGTTAGTGTGTGCTTGGTGGGTTTTTCATGGGAATGGATATAGTGAATAGGCTTGGAAAGTCCATTCTCGTAGTTGGATAATATTATAGACATGGATAATTGACCATCATCCTTCATCCTCTCTCAGAAATTCGTTAGATAATAAAAACTAAAATAGACATTTTCATCTCCTTTTAACTTGTTGATAACCCTTCGAACCGTTTTGTTCGTCGTTTTGTATGTTGGATCAACCTCCCAGTCGTTGATCTTATACGTTGGACCGATTTTCTCTTACACGTGTTTTATTTGAAG

Coding sequence (CDS)

ATGGTGGAGGATGGACCTTCCTTCATTGAGTCACTGTCTCTTTCCAACCACACCCATCCCACTTTTTCCCTCTTTAATCAGTCCACATGGCAGCAAAGTCAGTTGGATGCTGCCATTGCTATGGAAAGTGAATCAACTAGCGAGAGGTTGGGATTGCTTAAAGTGCTTGTGATTCAAGGGAAGAAACTAGTAATTCGTGATTTCAAGAGCAGCGATCCTTATGTTGTTGTCAAGTTGGGCAATCAGACAGCCAAGACCAAAGTTATCAATAGCTGCCTTAACCCTGTTTGGAATGAAGAGCTGAGCTTCTCCCTCACCCAACCTGTCAAAGATCTGACATTAGAAGTGTTTGACAAAGATCGGTTCAAGTCAGATGACAAGATGGGACATGCCGAGCTGAGTCTTAAACCGATAGTTTCGGCTGCTCGATTGAGACGGGCTCTTGGAATTTCATTGGGGGCAACAATGTTAAGAAAGGTTACTCCAGACACTGATAACTGCCTAGCAAGGGACAGCAGCATTAGTTGCATGGAGGGAGGGGGCGTAACACAGAGCGTTTGGTTGAAGCTTCGTGACGTAGAATCTGGTGAAATAGAGCTAAAGATCAAGTTCATCGATCAACCTGGTCGGCCGTCCAGATAA
BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: CAR11_ARATH (Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana GN=CAR11 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.0e-60
Identity = 116/162 (71.60%), Postives = 137/162 (84.57%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           E LGLL+V VIQGKKLVIRDFKSSDPYV+VKLGN++AKTKVIN+CLNPVWNEEL+F+L  
Sbjct: 3   EPLGLLQVTVIQGKKLVIRDFKSSDPYVIVKLGNESAKTKVINNCLNPVWNEELNFTLKD 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           P   L LEVFDKDRFK+DDKMGHA LSL+P++S ARLR  + +S G T LRKV PD +NC
Sbjct: 63  PAAVLALEVFDKDRFKADDKMGHASLSLQPLISVARLRHVVRVSSGETTLRKVLPDPENC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
           ++R+S+ISC++ G V QSVWL+L  VESGEIELKIK ID PG
Sbjct: 123 VSRESTISCID-GEVVQSVWLRLCAVESGEIELKIKLIDPPG 163

BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: GAP1_ORYSI (GTPase activating protein 1 OS=Oryza sativa subsp. indica GN=OsI_07012 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.6e-35
Identity = 76/160 (47.50%), Postives = 112/160 (70.00%), Query Frame = 1

Query: 50  LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQPV 109
           +GL+KV V++G  L +RD +SSDPYV+V++G Q  KT+VI    NP WN+EL+ S+  P 
Sbjct: 6   VGLVKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLSIEDPA 65

Query: 110 KDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNCLA 169
             + LEV+DKD F  DD MG+AEL ++P+V   ++ +  G++   T+++KV P+  NCLA
Sbjct: 66  VPVRLEVYDKDTF-IDDAMGNAELDIRPLVEVVKM-KIEGVA-DNTVVKKVVPNRQNCLA 125

Query: 170 RDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
            +S+I   E G V Q V L+LRDVE GEIEL+++++D PG
Sbjct: 126 EESTIYISE-GKVKQDVVLRLRDVECGEIELQLQWVDIPG 161

BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: GAP1_ORYSJ (GTPase activating protein 1 OS=Oryza sativa subsp. japonica GN=GAP1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.6e-35
Identity = 76/160 (47.50%), Postives = 112/160 (70.00%), Query Frame = 1

Query: 50  LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQPV 109
           +GL+KV V++G  L +RD +SSDPYV+V++G Q  KT+VI    NP WN+EL+ S+  P 
Sbjct: 6   VGLVKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLSIEDPA 65

Query: 110 KDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNCLA 169
             + LEV+DKD F  DD MG+AEL ++P+V   ++ +  G++   T+++KV P+  NCLA
Sbjct: 66  VPVRLEVYDKDTF-IDDAMGNAELDIRPLVEVVKM-KIEGVA-DNTVVKKVVPNRQNCLA 125

Query: 170 RDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
            +S+I   E G V Q V L+LRDVE GEIEL+++++D PG
Sbjct: 126 EESTIYISE-GKVKQDVVLRLRDVECGEIELQLQWVDIPG 161

BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: CAR3_ARATH (Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana GN=CAR3 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.3e-33
Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1

Query: 50  LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQPV 109
           LG+L+V V +G  L +RD  SSDPYVV+KLG Q  KTKV+   +NP W E+LSF++T P 
Sbjct: 8   LGILRVRVQRGVNLAVRDVSSSDPYVVLKLGRQKLKTKVVKQNVNPQWQEDLSFTVTDPN 67

Query: 110 KDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNCLA 169
             LTL V+D D F  DDKMG AE+ LKP + A R+  + G+  G T++  + P   NCLA
Sbjct: 68  LPLTLIVYDHDFFSKDDKMGDAEIDLKPYIEALRMELS-GLPDG-TIISTIGPSRGNCLA 127

Query: 170 RDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
            +S I  +    + Q + L+LR+VE GE+E+++++ID PG
Sbjct: 128 EESYIRWI-NDRIVQHICLRLRNVERGEVEIELQWIDLPG 164

BLAST of CmoCh03G006200 vs. Swiss-Prot
Match: CAR4_ARATH (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana GN=CAR4 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32
Identity = 75/173 (43.35%), Postives = 109/173 (63.01%), Query Frame = 1

Query: 37  AAIAMESESTSERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPV 96
           A  A  S    + LGLL++ + +G  L +RD  SSDPYVVVK+G Q  KT+VIN  +NP 
Sbjct: 4   ACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPE 63

Query: 97  WNEELSFSLTQPVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATM 156
           WNE+L+ S+T     + L V+D D F  DDKMG AE  +KP + A R++   G+  G T+
Sbjct: 64  WNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLD-GLPSG-TI 123

Query: 157 LRKVTPDTDNCLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
           +  V P   NCLA +S ++ ++ G + Q + L+LR VE GE+E ++++ID PG
Sbjct: 124 VTTVKPSRRNCLAEESRVTWVD-GKLVQDLVLRLRHVECGEVEAQLQWIDLPG 173

BLAST of CmoCh03G006200 vs. TrEMBL
Match: A0A0A0KHP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511000 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.6e-84
Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 1

Query: 47  SERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT 106
           SE LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT
Sbjct: 3   SESLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT 62

Query: 107 QPVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDN 166
            PV+DLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALG+SLGATMLRKV PDTDN
Sbjct: 63  DPVQDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGVSLGATMLRKVIPDTDN 122

Query: 167 CLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRPSR 214
           CLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG PSR
Sbjct: 123 CLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGPPSR 169

BLAST of CmoCh03G006200 vs. TrEMBL
Match: B9T578_RICCO (ARF GTPase activator, putative OS=Ricinus communis GN=RCOM_1065460 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.8e-63
Identity = 125/166 (75.30%), Postives = 145/166 (87.35%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           E+LGLLKV V++GK+LVIRDFKSSDPYVVVKLGNQT KTKVINSCLNPVWNEELSFSLT+
Sbjct: 3   EQLGLLKVTVVRGKRLVIRDFKSSDPYVVVKLGNQTLKTKVINSCLNPVWNEELSFSLTE 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           P+  L+LEVFDKDRFK+DDKMGHA +SL+PI SAARL++ L +S G T+LRKV PDTDNC
Sbjct: 63  PIGVLSLEVFDKDRFKADDKMGHAHISLQPIASAARLKQILQVSSGETILRKVVPDTDNC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRPSR 214
           LAR+SSISC++ G V QSVWL+L  VESGEIELKIK ++ P   SR
Sbjct: 123 LARESSISCID-GEVVQSVWLRLCAVESGEIELKIKLVNPPVASSR 167

BLAST of CmoCh03G006200 vs. TrEMBL
Match: D7TRX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0531g00030 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.2e-61
Identity = 121/164 (73.78%), Postives = 138/164 (84.15%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           E +G+LKV+V+QGK+LVIRDFKSSDPYV+VKLGNQTAKTKVINSCLNPVWNEELSFSL  
Sbjct: 3   EPVGMLKVIVVQGKRLVIRDFKSSDPYVIVKLGNQTAKTKVINSCLNPVWNEELSFSLMD 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           PV  L LEVFDKDRFK+DDKMGHA LSL+PIVSAARLR+ LG+S G T LRKV PD DNC
Sbjct: 63  PVGVLYLEVFDKDRFKADDKMGHAHLSLQPIVSAARLRQILGVSSGETTLRKVIPDPDNC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRP 212
           L R+S +SC+  G V Q VWL+L  VESGEI+L+IK +D P  P
Sbjct: 123 LVRESCVSCI-NGEVVQDVWLRLCGVESGEIQLQIKLMDPPAAP 165

BLAST of CmoCh03G006200 vs. TrEMBL
Match: B9HC25_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00650g PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.1e-61
Identity = 123/166 (74.10%), Postives = 142/166 (85.54%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           E+LGLLKV V+ G++LVIRDFK+SDPYVV+KLGNQTAKTKVINSCLNPVWNEELSFSL +
Sbjct: 3   EQLGLLKVTVVLGRRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELSFSLRE 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           PV  L+LEVFDKDRFK+DDKMGHA L+L+PI SAARL++   +S G T+LRKV PDTDNC
Sbjct: 63  PVGVLSLEVFDKDRFKADDKMGHAHLNLQPIASAARLKQFAKVSSGETILRKVVPDTDNC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRPSR 214
           LAR+SSISC+  G V QSVWL+L  VESGEIELKIK ID P   S+
Sbjct: 123 LARESSISCI-NGEVVQSVWLRLCAVESGEIELKIKLIDPPVASSK 167

BLAST of CmoCh03G006200 vs. TrEMBL
Match: W9QNM0_9ROSA (Putative ADP-ribosylation factor GTPase-activating protein AGD13 OS=Morus notabilis GN=L484_010622 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.1e-61
Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           ERLGLLKV+V+QGK+LVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEEL+FSLT+
Sbjct: 3   ERLGLLKVVVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELTFSLTE 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           P+  L LEVFDKD  K+DDKMGHA LSL+P+VSAARL++ L    G T LRKV PD+DNC
Sbjct: 63  PIGVLNLEVFDKDLLKTDDKMGHAHLSLQPLVSAARLKQILQNFSGETTLRKVVPDSDNC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG--RPSR 214
           L R+SSI+C+    V QSVWL+LRDVESGEIELKIK I+ P    PSR
Sbjct: 123 LVRESSITCV-NDEVLQSVWLRLRDVESGEIELKIKLIEGPAALAPSR 169

BLAST of CmoCh03G006200 vs. TAIR10
Match: AT5G47710.1 (AT5G47710.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 234.6 bits (597), Expect = 5.8e-62
Identity = 116/162 (71.60%), Postives = 137/162 (84.57%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           E LGLL+V VIQGKKLVIRDFKSSDPYV+VKLGN++AKTKVIN+CLNPVWNEEL+F+L  
Sbjct: 3   EPLGLLQVTVIQGKKLVIRDFKSSDPYVIVKLGNESAKTKVINNCLNPVWNEELNFTLKD 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           P   L LEVFDKDRFK+DDKMGHA LSL+P++S ARLR  + +S G T LRKV PD +NC
Sbjct: 63  PAAVLALEVFDKDRFKADDKMGHASLSLQPLISVARLRHVVRVSSGETTLRKVLPDPENC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
           ++R+S+ISC++ G V QSVWL+L  VESGEIELKIK ID PG
Sbjct: 123 VSRESTISCID-GEVVQSVWLRLCAVESGEIELKIKLIDPPG 163

BLAST of CmoCh03G006200 vs. TAIR10
Match: AT1G73580.1 (AT1G73580.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-34
Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1

Query: 50  LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQPV 109
           LG+L+V V +G  L +RD  SSDPYVV+KLG Q  KTKV+   +NP W E+LSF++T P 
Sbjct: 8   LGILRVRVQRGVNLAVRDVSSSDPYVVLKLGRQKLKTKVVKQNVNPQWQEDLSFTVTDPN 67

Query: 110 KDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNCLA 169
             LTL V+D D F  DDKMG AE+ LKP + A R+  + G+  G T++  + P   NCLA
Sbjct: 68  LPLTLIVYDHDFFSKDDKMGDAEIDLKPYIEALRMELS-GLPDG-TIISTIGPSRGNCLA 127

Query: 170 RDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
            +S I  +    + Q + L+LR+VE GE+E+++++ID PG
Sbjct: 128 EESYIRWI-NDRIVQHICLRLRNVERGEVEIELQWIDLPG 164

BLAST of CmoCh03G006200 vs. TAIR10
Match: AT3G17980.1 (AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-33
Identity = 75/173 (43.35%), Postives = 109/173 (63.01%), Query Frame = 1

Query: 37  AAIAMESESTSERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPV 96
           A  A  S    + LGLL++ + +G  L +RD  SSDPYVVVK+G Q  KT+VIN  +NP 
Sbjct: 4   ACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPE 63

Query: 97  WNEELSFSLTQPVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATM 156
           WNE+L+ S+T     + L V+D D F  DDKMG AE  +KP + A R++   G+  G T+
Sbjct: 64  WNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLD-GLPSG-TI 123

Query: 157 LRKVTPDTDNCLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
           +  V P   NCLA +S ++ ++ G + Q + L+LR VE GE+E ++++ID PG
Sbjct: 124 VTTVKPSRRNCLAEESRVTWVD-GKLVQDLVLRLRHVECGEVEAQLQWIDLPG 173

BLAST of CmoCh03G006200 vs. TAIR10
Match: AT1G66360.1 (AT1G66360.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 137.9 bits (346), Expect = 7.3e-33
Identity = 69/160 (43.12%), Postives = 105/160 (65.62%), Query Frame = 1

Query: 50  LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQPV 109
           LGLL++ VI+G  L IRD +SSDPYV+V++G Q  +T+V+   LN  WNE+L+ S+T P 
Sbjct: 5   LGLLRLHVIRGVNLAIRDSQSSDPYVIVRMGKQKLRTRVMKKNLNTEWNEDLTLSVTDPT 64

Query: 110 KDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNCLA 169
             + + V+D+DRF  DDKMG A   + P + A R++  LG     T++ K+     NCL+
Sbjct: 65  LPVKIMVYDRDRFSRDDKMGDAIFHIDPFLEAIRIQNQLGGLPEGTVIMKIQASRQNCLS 124

Query: 170 RDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
            +S I     G + Q+++LKL++VE GEIEL++++ID  G
Sbjct: 125 EESKI-VWHKGKIVQNMFLKLQNVERGEIELQLEWIDVSG 163

BLAST of CmoCh03G006200 vs. TAIR10
Match: AT1G70790.2 (AT1G70790.2 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 137.5 bits (345), Expect = 9.6e-33
Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 1

Query: 50  LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQPV 109
           LG+L+V V +G  L IRD  +SDPYVV+ L NQ  KT+VIN+  NPVWNE+L+ S+    
Sbjct: 6   LGILRVHVKRGINLAIRDATTSDPYVVITLANQKLKTRVINNNCNPVWNEQLTLSIKDVN 65

Query: 110 KDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNCLA 169
             + L VFDKDRF  DDKMG AE+  +P + A ++            ++++ P   NCLA
Sbjct: 66  DPIRLTVFDKDRFSGDDKMGDAEIDFRPFLEAHQMELDFQKLPNGCAIKRIRPGRTNCLA 125

Query: 170 RDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG 210
            +SSI+    G + Q + L+L++VE GE+EL +++ D PG
Sbjct: 126 EESSIT-WSNGKIMQEMILRLKNVECGEVELMLEWTDGPG 164

BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|449434048|ref|XP_004134808.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 6.6e-84
Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 1

Query: 47  SERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT 106
           SE LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT
Sbjct: 3   SESLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT 62

Query: 107 QPVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDN 166
            PV+DLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALG+SLGATMLRKV PDTDN
Sbjct: 63  DPVQDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGVSLGATMLRKVIPDTDN 122

Query: 167 CLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRPSR 214
           CLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG PSR
Sbjct: 123 CLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGPPSR 169

BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|659080778|ref|XP_008440974.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 4.7e-82
Identity = 158/167 (94.61%), Postives = 161/167 (96.41%), Query Frame = 1

Query: 47  SERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT 106
           SE LGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT
Sbjct: 3   SESLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLT 62

Query: 107 QPVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDN 166
            PV+DLT EVFDKDRFKSDDKMGHA+LSLKPIVSAARLRRALG+SLGATMLRKV PDTDN
Sbjct: 63  HPVQDLTFEVFDKDRFKSDDKMGHAKLSLKPIVSAARLRRALGVSLGATMLRKVIPDTDN 122

Query: 167 CLARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRPSR 214
           CLARDSSISCME GGVTQSVWLKLRDVESGEIELKIKFIDQPG PSR
Sbjct: 123 CLARDSSISCMEEGGVTQSVWLKLRDVESGEIELKIKFIDQPGLPSR 169

BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|255585404|ref|XP_002533397.1| (PREDICTED: protein C2-DOMAIN ABA-RELATED 11 [Ricinus communis])

HSP 1 Score: 248.8 bits (634), Expect = 8.4e-63
Identity = 125/166 (75.30%), Postives = 145/166 (87.35%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           E+LGLLKV V++GK+LVIRDFKSSDPYVVVKLGNQT KTKVINSCLNPVWNEELSFSLT+
Sbjct: 3   EQLGLLKVTVVRGKRLVIRDFKSSDPYVVVKLGNQTLKTKVINSCLNPVWNEELSFSLTE 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           P+  L+LEVFDKDRFK+DDKMGHA +SL+PI SAARL++ L +S G T+LRKV PDTDNC
Sbjct: 63  PIGVLSLEVFDKDRFKADDKMGHAHISLQPIASAARLKQILQVSSGETILRKVVPDTDNC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRPSR 214
           LAR+SSISC++ G V QSVWL+L  VESGEIELKIK ++ P   SR
Sbjct: 123 LARESSISCID-GEVVQSVWLRLCAVESGEIELKIKLVNPPVASSR 167

BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|225469943|ref|XP_002275013.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Vitis vinifera])

HSP 1 Score: 242.7 bits (618), Expect = 6.0e-61
Identity = 121/164 (73.78%), Postives = 138/164 (84.15%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           E +G+LKV+V+QGK+LVIRDFKSSDPYV+VKLGNQTAKTKVINSCLNPVWNEELSFSL  
Sbjct: 3   EPVGMLKVIVVQGKRLVIRDFKSSDPYVIVKLGNQTAKTKVINSCLNPVWNEELSFSLMD 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           PV  L LEVFDKDRFK+DDKMGHA LSL+PIVSAARLR+ LG+S G T LRKV PD DNC
Sbjct: 63  PVGVLYLEVFDKDRFKADDKMGHAHLSLQPIVSAARLRQILGVSSGETTLRKVIPDPDNC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPGRP 212
           L R+S +SC+  G V Q VWL+L  VESGEI+L+IK +D P  P
Sbjct: 123 LVRESCVSCI-NGEVVQDVWLRLCGVESGEIQLQIKLMDPPAAP 165

BLAST of CmoCh03G006200 vs. NCBI nr
Match: gi|703066277|ref|XP_010087670.1| (putative ADP-ribosylation factor GTPase-activating protein AGD13 [Morus notabilis])

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-60
Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1

Query: 48  ERLGLLKVLVIQGKKLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFSLTQ 107
           ERLGLLKV+V+QGK+LVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEEL+FSLT+
Sbjct: 3   ERLGLLKVVVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELTFSLTE 62

Query: 108 PVKDLTLEVFDKDRFKSDDKMGHAELSLKPIVSAARLRRALGISLGATMLRKVTPDTDNC 167
           P+  L LEVFDKD  K+DDKMGHA LSL+P+VSAARL++ L    G T LRKV PD+DNC
Sbjct: 63  PIGVLNLEVFDKDLLKTDDKMGHAHLSLQPLVSAARLKQILQNFSGETTLRKVVPDSDNC 122

Query: 168 LARDSSISCMEGGGVTQSVWLKLRDVESGEIELKIKFIDQPG--RPSR 214
           L R+SSI+C+    V QSVWL+LRDVESGEIELKIK I+ P    PSR
Sbjct: 123 LVRESSITCV-NDEVLQSVWLRLRDVESGEIELKIKLIEGPAALAPSR 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CAR11_ARATH1.0e-6071.60Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana GN=CAR11 PE=1 SV=1[more]
GAP1_ORYSI9.6e-3547.50GTPase activating protein 1 OS=Oryza sativa subsp. indica GN=OsI_07012 PE=3 SV=1[more]
GAP1_ORYSJ9.6e-3547.50GTPase activating protein 1 OS=Oryza sativa subsp. japonica GN=GAP1 PE=1 SV=1[more]
CAR3_ARATH5.3e-3346.88Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana GN=CAR3 PE=3 SV=1[more]
CAR4_ARATH2.6e-3243.35Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana GN=CAR4 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KHP1_CUCSA4.6e-8496.41Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511000 PE=4 SV=1[more]
B9T578_RICCO5.8e-6375.30ARF GTPase activator, putative OS=Ricinus communis GN=RCOM_1065460 PE=4 SV=1[more]
D7TRX1_VITVI4.2e-6173.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0531g00030 PE=4 SV=... [more]
B9HC25_POPTR7.1e-6174.10Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00650g PE=4 SV=1[more]
W9QNM0_9ROSA7.1e-6174.40Putative ADP-ribosylation factor GTPase-activating protein AGD13 OS=Morus notabi... [more]
Match NameE-valueIdentityDescription
AT5G47710.15.8e-6271.60 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G73580.13.0e-3446.88 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT3G17980.11.5e-3343.35 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G66360.17.3e-3343.13 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G70790.29.6e-3343.75 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
Match NameE-valueIdentityDescription
gi|449434048|ref|XP_004134808.1|6.6e-8496.41PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucumis... [more]
gi|659080778|ref|XP_008440974.1|4.7e-8294.61PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucumis... [more]
gi|255585404|ref|XP_002533397.1|8.4e-6375.30PREDICTED: protein C2-DOMAIN ABA-RELATED 11 [Ricinus communis][more]
gi|225469943|ref|XP_002275013.1|6.0e-6173.78PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Vit... [more]
gi|703066277|ref|XP_010087670.1|1.0e-6074.40putative ADP-ribosylation factor GTPase-activating protein AGD13 [Morus notabili... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006566 threonine metabolic process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0004609 phosphatidylserine decarboxylase activity
molecular_function GO:0004623 phospholipase A2 activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G006200.1CmoCh03G006200.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPRINTSPR00360C2DOMAINcoord: 67..79
score: 1.8E-5coord: 91..104
score: 1.8E-5coord: 112..120
score: 1.
IPR000008C2 domainGENE3DG3DSA:2.60.40.150coord: 42..148
score: 1.4E-31coord: 183..205
score: 1.4
IPR000008C2 domainPFAMPF00168C2coord: 52..143
score: 8.5
IPR000008C2 domainSMARTSM00239C2_3ccoord: 52..147
score: 2.0
IPR000008C2 domainPROFILEPS50004C2coord: 53..132
score: 15
IPR000008C2 domainunknownSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 179..206
score: 4.27E-30coord: 50..140
score: 4.27
NoneNo IPR availablePANTHERPTHR23180CENTAURIN/ARFcoord: 26..202
score: 1.2
NoneNo IPR availablePANTHERPTHR23180:SF249ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATEDcoord: 26..202
score: 1.2

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G006200Cucurbita moschata (Rifu)cmocmoB455
CmoCh03G006200Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G006200Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G006200Cucurbita pepo (Zucchini)cmocpeB630
CmoCh03G006200Silver-seed gourdcarcmoB0886