CmoCh03G005330 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCCAAACGGTCACCGTTGGATGAGCCACCGGCAGCGTCTTCCTCCGAATTAGAAGAAACCTCATCGGGCGAGGAGGAGGAAGGTGTATCCAGAGACGGATCTTCCTCTGAAGAAGGGGAGGATGAAGAAGAAACTCAAGCTCAGAAACCGAAAAAGTCTGCTCTTCCTTCTACTCCTGCTGTCGATAAAAAAGCAGCACCGAAGAAGTCTGAACTTGCTACTAACTCTCAGGCTCAGTCTTCTTCCTCAGACAGCGGCTCCGGATCCGATACCGATTCGGGTACATCCGGAAGAAACGTCCAGCCGATTACCTCTAATCCGATTGAAGAGACTCCAAAGATGAAAAAGCCCAGATCCAAGCCTTCTGCCTCAGCTACGCCTGCGCGATCGTCTTTGAAGAGGCCTAGTGAGACAGTAAGAGAGGCAAAACGGCCAAAGAGTTCTGAGGCTGACGCTGATGATGGGGTTGTCGCGGACGATGATTCCAAGAAATCTGTTGACGAATCCAAAAAGTTGTTTCAGAGACTATGGAGTGAGGACGATGAGATTGCTATACTGAACGGCATAATTGATTATACAGCCAAGAAGGGTGCTGACCCAGCTCTTGATATGAATGCCTTCCATGATTTCATCAAGAAATCTCTTCACGTCGACGTAACCAGGGCCCAGTTAGTGGATAAGATACGTCGATTGAAGAAGAAATACAGGAACAATGTTGATAGAGGTAAAAAGGGTGCCGACCCAACATTTTCAAAACCCCACGAACAAAAAGGTTTTGAGCTGTCAAAGAAAATATGGGGGGGCGAAGGAATTACTCGGACTCCGGTTGTGGAGCAGCCCAAGCCAAATGCTAATGGCACTCCAAAGAAGAATCAAAGAGGTAGCTCCACTAAGACACTGGCTTCACTCAAAGCTGAGTTGCTTCCTTCTCCAGATGCCCCAAAGGATGATGCTAAGATGAAAATTGATGATAACGAAGCTCCTTCAGGGTGCATGGATGGTTTTGTTGCATTTGAAAGGTCTTTGGGTGCTGCTGGCTTTCCAGAAAGTTTTTTGAAGCCAGGATTAAATTTAATAGGGCAATCCAAGAGAACAGAGCTGGAGGAGGAGTGGAAGAAATTGCATCTTGCAGAACTAGAGCTTTTTCTGAAGAGGACGGATTTGATTAGGGACCAGGCAAAGTTGATACTAGACGCCTACAAATCATCTGACAAGTAAGGATTTGGACTTTGGACAAGAGTATAATTCTTCAGCTTTCAGATTGATAGTTCAGAGCTCAAATATATTCATGTTGTTTGTTGTTTTGTCTAGGATTAGGGTTGTCATACTTTTAAATTTGTCTGATTTTATTTATATCCTCGAGACCTTAGGGTAAGTTACTACCGGCTATGCATAAATCTCTACTTCTGTTGGTGAATTCTACTACTTATATGTGGTATTGACGTCAGTTTATTCTAGTGATGGTGTATTTATCTTTTTGTTTCTCTCCCAAGAACAACTGCTTTTTATTTTCCTCATTGTTAAACAGGTGACTTTCTGTCTTACTCTGGTATGGGTATTATACTATCATTCAAGATGTTTGTTGGATGCTTCTTTTCTTGGCGTTTTCAGAAATTGAACATCATGAATATTATGATTTTCTCCATGTTTAATTTGAGGTAAGGAAATCCCATGGAGGTGTAAATTACGGTTCTCTTGTTGTGGATGAATTGCTCATATAGGTGCTGAATGGGGTGAATAGGTTTATATGACTGTTTGATTAATGTTCTTTTAGTGTTCGCAGATTATGATCTTATAACAATTATACAAAATTCTGGTTAATTGAATGATTCAAGAATTTTATAGTAAAAATATGGTATATAACCCCATTTCCAAATTGCAGATTAGTACATTAGTTCTTATAGAAGGCCTATTTTACTATCTCTGAACAACAGGAATATGATTTCCTATTAGCAAAGAGAGCTATTTCCCCAAATTTACTAGCTACGAGTTGAAGTAACATCCGGAAGTTAGTTTTCTTAGGAAAACATGAAGATCAGAGGTGGCTAAACGTGGCCTGTAGCTCCGGCAGGGTGCCCCTGTGGTGGCGGCCTCGTCTCCTCCCTGTTTCCTGCTGTGGCAGAAACATAGTAAGCAACTGCAAACAAGCCGTGTACGAAGCACGCGATCCCGCCTATAGACAGAAGATGATTGTGAGCAAGCCCGCATGATTTTCTTGACCTGGTGTTATACATCGCCCCAGAGATGAGCAACGAGAATCCAACCACTACTGCAATCCTGGTGTATTTGGCATTCAAAAACATCCAGTTTATGTGTGTTTTCAGATGACAAGTCTATTAGGACTTCAGAGGGAAGGGAAGGCTGCTACTCACCATGCAAAGACGAGTGAACCCGCTGCAAGTTGCTTGTTAGAGGTTAATCCTTTGTATTCTTGAGCAGATCGAACATAAACACACCCACCAACCAGGTTGGCAATGGCGTGAGCAAGGCCCAGCAGTATGGCTGCAGCCAAGCCTAGCTTGAAAGCATTATAGCTTGGGTCTTTACACTCAAATATCCACATTTTGAAATGGTTCACCTGTCAAAAGTACTCAAAATCATTTGAAAAACAAAATATCCCATAACAATTTTGACTCCAGCTTTCAATATACCTTGTTTTGAGCTACTTCAGCTTGAATTCCAAGAATTCCGGCTGTAACATCCATAACAATAACCAAGATGCAGACAACAAAACCAGAAGCTTTCTGCATTTTTGCAGACACAAATGGAAGGAAAGCAACTCAATAGGAAATCACAGGTAAGGACTGTATGCTTTGTGAAGAATGCTTTGTAAGTTCCCTACATTAATAGGATGGAATACGAATAAAGGAAAGGCCAGCTTGCAGGTTAACAAGCTTATATGTGATGCCTTAGATTTAGATGTAATAACATTGTAAAAGCTTCTTTTCTCCTTCAAATTTTCTTTCCTATGTCTTCCCTTTTATGTTTAGATGCTGATTCTTGTCACAGGGTGCAAGGAAAGTTGGGCATCTCCAGCAGAGCAGGCTGAGTATCATTCTCTCACTGTTTCCCTAATCTTTACTCTCCCTCTTCAAGCTTTTTAATCCACCAAAAAGCTCTTTGGAATATAACACAGTTAAAAGAGCTGGGTTCTTTTTTTCTTTTGGTATCCCACTACTTGTTATGTGATCATCA ATGGCTCCCAAACGGTCACCGTTGGATGAGCCACCGGCAGCGTCTTCCTCCGAATTAGAAGAAACCTCATCGGGCGAGGAGGAGGAAGGTGTATCCAGAGACGGATCTTCCTCTGAAGAAGGGGAGGATGAAGAAGAAACTCAAGCTCAGAAACCGAAAAAGTCTGCTCTTCCTTCTACTCCTGCTGTCGATAAAAAAGCAGCACCGAAGAAGTCTGAACTTGCTACTAACTCTCAGGCTCAGTCTTCTTCCTCAGACAGCGGCTCCGGATCCGATACCGATTCGGGTACATCCGGAAGAAACGTCCAGCCGATTACCTCTAATCCGATTGAAGAGACTCCAAAGATGAAAAAGCCCAGATCCAAGCCTTCTGCCTCAGCTACGCCTGCGCGATCGTCTTTGAAGAGGCCTAGTGAGACAGTAAGAGAGGCAAAACGGCCAAAGAGTTCTGAGGCTGACGCTGATGATGGGGTTGTCGCGGACGATGATTCCAAGAAATCTGTTGACGAATCCAAAAAGTTGTTTCAGAGACTATGGAGTGAGGACGATGAGATTGCTATACTGAACGGCATAATTGATTATACAGCCAAGAAGGGTGCTGACCCAGCTCTTGATATGAATGCCTTCCATGATTTCATCAAGAAATCTCTTCACGTCGACGTAACCAGGGCCCAGTTAGTGGATAAGATACGTCGATTGAAGAAGAAATACAGGAACAATGTTGATAGAGGTAAAAAGGGTGCCGACCCAACATTTTCAAAACCCCACGAACAAAAAGGTTTTGAGCTGTCAAAGAAAATATGGGGGGGCGAAGGAATTACTCGGACTCCGGTTGTGGAGCAGCCCAAGCCAAATGCTAATGGCACTCCAAAGAAGAATCAAAGAGGTAGCTCCACTAAGACACTGGCTTCACTCAAAGCTGAGTTGCTTCCTTCTCCAGATGCCCCAAAGGATGATGCTAAGATGAAAATTGATGATAACGAAGCTCCTTCAGGGTGCATGGATGGTTTTGTTGCATTTGAAAGGATTAGGGTTGTCATACTTTTAAATTTGTCTGATTTTATTTATATCCTCGAGACCTTAGGCAAAGAGAGCTATTTCCCCAAATTTACTAGCTACGAGTTGAAGGTGCCCCTGTGGTGGCGGCCTCGTCTCCTCCCTGTTTCCTGCTGTGGCAGAAACATAGTAAGCAACTGCAAACAAGCCGTGTACGAAGCACGCGATCCCGCCTATAGACAGAAGATGATTATGACAAGTCTATTAGGACTTCAGAGGGAAGGGAAGGCTGCTACTCACCATGCAAAGACGAGTGAACCCGCTGCAAGTTGCTTGTTAGAGACACAAATGGAAGGAAAGCAACTCAATAGGAAATCACAGGTAAGGACTGTATGCTTTGTGAAGAATGCTTTGGTGCAAGGAAAGTTGGGCATCTCCAGCAGAGCAGGCTGAGTATCATTCTCTCACTGTTTCCCTAATCTTTACTCTCCCTCTTCAAGCTTTTTAATCCACCAAAAAGCTCTTTGGAATATAACACAGTTAAAAGAGCTGGGTTCTTTTTTTCTTTTGGTATCCCACTACTTGTTATGTGATCATCA ATGGCTCCCAAACGGTCACCGTTGGATGAGCCACCGGCAGCGTCTTCCTCCGAATTAGAAGAAACCTCATCGGGCGAGGAGGAGGAAGGTGTATCCAGAGACGGATCTTCCTCTGAAGAAGGGGAGGATGAAGAAGAAACTCAAGCTCAGAAACCGAAAAAGTCTGCTCTTCCTTCTACTCCTGCTGTCGATAAAAAAGCAGCACCGAAGAAGTCTGAACTTGCTACTAACTCTCAGGCTCAGTCTTCTTCCTCAGACAGCGGCTCCGGATCCGATACCGATTCGGGTACATCCGGAAGAAACGTCCAGCCGATTACCTCTAATCCGATTGAAGAGACTCCAAAGATGAAAAAGCCCAGATCCAAGCCTTCTGCCTCAGCTACGCCTGCGCGATCGTCTTTGAAGAGGCCTAGTGAGACAGTAAGAGAGGCAAAACGGCCAAAGAGTTCTGAGGCTGACGCTGATGATGGGGTTGTCGCGGACGATGATTCCAAGAAATCTGTTGACGAATCCAAAAAGTTGTTTCAGAGACTATGGAGTGAGGACGATGAGATTGCTATACTGAACGGCATAATTGATTATACAGCCAAGAAGGGTGCTGACCCAGCTCTTGATATGAATGCCTTCCATGATTTCATCAAGAAATCTCTTCACGTCGACGTAACCAGGGCCCAGTTAGTGGATAAGATACGTCGATTGAAGAAGAAATACAGGAACAATGTTGATAGAGGTAAAAAGGGTGCCGACCCAACATTTTCAAAACCCCACGAACAAAAAGGTTTTGAGCTGTCAAAGAAAATATGGGGGGGCGAAGGAATTACTCGGACTCCGGTTGTGGAGCAGCCCAAGCCAAATGCTAATGGCACTCCAAAGAAGAATCAAAGAGGTAGCTCCACTAAGACACTGGCTTCACTCAAAGCTGAGTTGCTTCCTTCTCCAGATGCCCCAAAGGATGATGCTAAGATGAAAATTGATGATAACGAAGCTCCTTCAGGGTGCATGGATGGTTTTGTTGCATTTGAAAGGATTAGGGTTGTCATACTTTTAAATTTGTCTGATTTTATTTATATCCTCGAGACCTTAGGCAAAGAGAGCTATTTCCCCAAATTTACTAGCTACGAGTTGAAGGTGCCCCTGTGGTGGCGGCCTCGTCTCCTCCCTGTTTCCTGCTGTGGCAGAAACATAGTAAGCAACTGCAAACAAGCCGTGTACGAAGCACGCGATCCCGCCTATAGACAGAAGATGATTATGACAAGTCTATTAGGACTTCAGAGGGAAGGGAAGGCTGCTACTCACCATGCAAAGACGAGTGAACCCGCTGCAAGTTGCTTGTTAGAGACACAAATGGAAGGAAAGCAACTCAATAGGAAATCACAGGTAAGGACTGTATGCTTTGTGAAGAATGCTTTGGTGCAAGGAAAGTTGGGCATCTCCAGCAGAGCAGGCTGA
BLAST of CmoCh03G005330 vs. Swiss-Prot
Match: MDA1_ARATH (Mediator-associated protein 1 OS=Arabidopsis thaliana GN=At4g25210 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.9e-26 Identity = 114/314 (36.31%), Postives = 166/314 (52.87%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TrEMBL
Match: A0A0A0KN49_CUCSA (Transcription regulator OS=Cucumis sativus GN=Csa_6G516640 PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 1.5e-143 Identity = 292/349 (83.67%), Postives = 317/349 (90.83%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TrEMBL
Match: M5WQU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006690mg PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.9e-61 Identity = 185/350 (52.86%), Postives = 232/350 (66.29%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TrEMBL
Match: A0A0D2Q0C7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G037800 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.7e-55 Identity = 163/328 (49.70%), Postives = 209/328 (63.72%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TrEMBL
Match: A0A067LAY0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17238 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.5e-55 Identity = 172/342 (50.29%), Postives = 214/342 (62.57%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TrEMBL
Match: A0A139YGX0_GOSHI (GL1-enhancer binding protein OS=Gossypium hirsutum GN=GeBP PE=2 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 1.0e-54 Identity = 161/327 (49.24%), Postives = 202/327 (61.77%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TAIR10
Match: AT1G61730.1 (AT1G61730.1 DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 125.6 bits (314), Expect = 8.5e-29 Identity = 126/361 (34.90%), Postives = 189/361 (52.35%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TAIR10
Match: AT4G25210.1 (AT4G25210.1 DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 121.3 bits (303), Expect = 1.6e-27 Identity = 114/314 (36.31%), Postives = 166/314 (52.87%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TAIR10
Match: AT4G00390.1 (AT4G00390.1 DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 109.0 bits (271), Expect = 8.3e-24 Identity = 117/309 (37.86%), Postives = 159/309 (51.46%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TAIR10
Match: AT1G11510.1 (AT1G11510.1 DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-23 Identity = 104/332 (31.33%), Postives = 170/332 (51.20%), Query Frame = 1
BLAST of CmoCh03G005330 vs. TAIR10
Match: AT3G04930.1 (AT3G04930.1 DNA-binding storekeeper protein-related transcriptional regulator) HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20 Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 1
BLAST of CmoCh03G005330 vs. NCBI nr
Match: gi|659131160|ref|XP_008465540.1| (PREDICTED: mediator-associated protein 1-like [Cucumis melo]) HSP 1 Score: 522.3 bits (1344), Expect = 8.9e-145 Identity = 294/348 (84.48%), Postives = 320/348 (91.95%), Query Frame = 1
BLAST of CmoCh03G005330 vs. NCBI nr
Match: gi|659078860|ref|XP_008439944.1| (PREDICTED: mediator-associated protein 1 [Cucumis melo]) HSP 1 Score: 519.2 bits (1336), Expect = 7.5e-144 Identity = 295/349 (84.53%), Postives = 321/349 (91.98%), Query Frame = 1
BLAST of CmoCh03G005330 vs. NCBI nr
Match: gi|778720554|ref|XP_011658171.1| (PREDICTED: mediator-associated protein 1 [Cucumis sativus]) HSP 1 Score: 517.7 bits (1332), Expect = 2.2e-143 Identity = 292/349 (83.67%), Postives = 317/349 (90.83%), Query Frame = 1
BLAST of CmoCh03G005330 vs. NCBI nr
Match: gi|659102430|ref|XP_008452125.1| (PREDICTED: LOW QUALITY PROTEIN: mediator-associated protein 1-like [Cucumis melo]) HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91 Identity = 200/294 (68.03%), Postives = 224/294 (76.19%), Query Frame = 1
BLAST of CmoCh03G005330 vs. NCBI nr
Match: gi|1009108709|ref|XP_015886154.1| (PREDICTED: mediator-associated protein 1-like [Ziziphus jujuba]) HSP 1 Score: 276.9 bits (707), Expect = 6.5e-71 Identity = 200/369 (54.20%), Postives = 246/369 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |