CmoCh03G005140 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCCACCACATAAAAGTGCGAGCCCTACCAATAAAACCGATAAGCCTCGCCGTCATCTTCCTTCAATCATCTCCCGCAACAATTAACCAGAAATGATCTCACTCAAACCCTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTGAGTCCAATCACTAGACATCGGTCCAATTTCCCTCCTCCATTACGCACCAAAACGACCTTCAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACGCTCGAAGAGGCCGGCCTCGTCGAAGTATCCGGCCTCAGCACGCACGAACGATTTCTGTGCCGTTTAACCGTATATCCTCTGCTTCTCTATTTCCGCTTTCACTATATTTTGCGTTCTTCAATTATTACTGAACCTGTTCTCTGTGTTGGTTTAGATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTGAATGCGGGGAGATTATGCGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGAGGTTTTCCTCTCCCTCCTCCTGTCCGAGCTTTACTTCTCAGATACATGAATTTCTATTTCCTTACCTGTTAACTTATTAATTTAATTGTTATTTTAACATTTTCACTTCATAATTCAAAAGTTTATGATTTTTAAAAATATAACGTTGGTGTTTAAATCTTAATTAAATCCTCGTTTGTATTATGTACCCTAG TGTCCACCACATAAAAGTGCGAGCCCTACCAATAAAACCGATAAGCCTCGCCGTCATCTTCCTTCAATCATCTCCCGCAACAATTAACCAGAAATGATCTCACTCAAACCCTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTGAGTCCAATCACTAGACATCGGTCCAATTTCCCTCCTCCATTACGCACCAAAACGACCTTCAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACGCTCGAAGAGGCCGGCCTCGTCGAAGTATCCGGCCTCAGCACGCACGAACGATTTCTGTGCCGTTTAACCATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTGAATGCGGGGAGATTATGCGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGAGGTTTTCCTCTCCCTCCTCCTGTCCGAGCTTTACTTCTCAGATACATGAATTTCTATTTCCTTACCTGTTAACTTATTAATTTAATTGTTATTTTAACATTTTCACTTCATAATTCAAAAGTTTATGATTTTTAAAAATATAACGTTGGTGTTTAAATCTTAATTAAATCCTCGTTTGTATTATGTACCCTAG ATGATCTCACTCAAACCCTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTGAGTCCAATCACTAGACATCGGTCCAATTTCCCTCCTCCATTACGCACCAAAACGACCTTCAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACGCTCGAAGAGGCCGGCCTCGTCGAAGTATCCGGCCTCAGCACGCACGAACGATTTCTGTGCCGTTTAACCATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTGAATGCGGGGAGATTATGCGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGA
BLAST of CmoCh03G005140 vs. TrEMBL
Match: A0A0A0KHI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516880 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 9.1e-52 Identity = 115/147 (78.23%), Postives = 121/147 (82.31%), Query Frame = 1
BLAST of CmoCh03G005140 vs. TrEMBL
Match: M5WLL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026297mg PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 8.3e-37 Identity = 89/149 (59.73%), Postives = 103/149 (69.13%), Query Frame = 1
BLAST of CmoCh03G005140 vs. TrEMBL
Match: K4CX79_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.1e-36 Identity = 80/100 (80.00%), Postives = 87/100 (87.00%), Query Frame = 1
BLAST of CmoCh03G005140 vs. TrEMBL
Match: M1ASN1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011277 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-35 Identity = 79/100 (79.00%), Postives = 88/100 (88.00%), Query Frame = 1
BLAST of CmoCh03G005140 vs. TrEMBL
Match: F6I737_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0203g00050 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.0e-35 Identity = 85/144 (59.03%), Postives = 108/144 (75.00%), Query Frame = 1
BLAST of CmoCh03G005140 vs. TAIR10
Match: AT4G21445.1 (AT4G21445.1 unknown protein) HSP 1 Score: 143.7 bits (361), Expect = 9.0e-35 Identity = 66/91 (72.53%), Postives = 81/91 (89.01%), Query Frame = 1
BLAST of CmoCh03G005140 vs. NCBI nr
Match: gi|659078803|ref|XP_008439915.1| (PREDICTED: uncharacterized protein LOC103484560 [Cucumis melo]) HSP 1 Score: 216.1 bits (549), Expect = 4.1e-53 Identity = 117/147 (79.59%), Postives = 123/147 (83.67%), Query Frame = 1
BLAST of CmoCh03G005140 vs. NCBI nr
Match: gi|449433898|ref|XP_004134733.1| (PREDICTED: uncharacterized protein LOC101211873 [Cucumis sativus]) HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51 Identity = 115/147 (78.23%), Postives = 121/147 (82.31%), Query Frame = 1
BLAST of CmoCh03G005140 vs. NCBI nr
Match: gi|764552696|ref|XP_011460307.1| (PREDICTED: uncharacterized protein LOC105350305 [Fragaria vesca subsp. vesca]) HSP 1 Score: 167.5 bits (423), Expect = 1.7e-38 Identity = 92/150 (61.33%), Postives = 109/150 (72.67%), Query Frame = 1
BLAST of CmoCh03G005140 vs. NCBI nr
Match: gi|1009108821|ref|XP_015886868.1| (PREDICTED: uncharacterized protein LOC107422001 [Ziziphus jujuba]) HSP 1 Score: 162.9 bits (411), Expect = 4.1e-37 Identity = 93/149 (62.42%), Postives = 110/149 (73.83%), Query Frame = 1
BLAST of CmoCh03G005140 vs. NCBI nr
Match: gi|698529736|ref|XP_009761687.1| (PREDICTED: uncharacterized protein LOC104213836 [Nicotiana sylvestris]) HSP 1 Score: 162.2 bits (409), Expect = 7.0e-37 Identity = 86/132 (65.15%), Postives = 98/132 (74.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |