CmoCh03G004970 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G004970
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionzinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding
LocationCmo_Chr03 : 5269664 .. 5274351 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATGGCGGCGGATGAGGCTTCTAATTTGCCTCTCCAGTATGGTTCTGATGATTTTGGTGAAGACATGTCCATTGACTATGAAACGTTAATACATCTACTGAGCGAGGATCTGGATCCTTTGCAGGTAGGTTTTGTTGCTGTTGGTTATAGAACAATACTGATTTTCCTTTTTTGAAATTGAGTTTAGAGGCCTTGGATTTTAGGGGAAACTGTAGCAAACAGTTGCAATTCCCCATTTCTAGGTTGGAATCCCTTAGAATTGGTTGGTGCTTTGAGCGTATGATCCGCTAACAGCTGATTCAACCAAAAATTCAGAGTAAACGAGCTAAGCTCATAGTACAGAGCGACGTTTATTTTCATGCTGCTTCACCCAAAGATTCTGGGTCATTCTCTCGGCTAAGCACTTGACATCTCGCATCTAATGAATAAGATAAAATTGAAATATGGCTTTATAATATTCTATCATTATTTCACTTGTTTCCTAGGAATTTGTTCAAAAGAGTGCAGAACTCATATATCTCTACTTCTTTCTGTTTATGGACCATTTTTAATTAATTTTAAACTGGATATATACGAAGCAACATTGGACTTGTACCTCAAAGCTAAGTGGAGAAATAAGGGGATAGCAAAGGGCATGGGTTTTTGGTAGACTTTCTCTTTGCGTGTTATATCTTCTCACGGGGTACCTGGATAATCTTTACATTATATCTCACTAGAACTTTCTCTTGGCTATTTGTTTACAAATATCGCAGGATAAGCCAGAGGACTTGTCGCCATATAATGCATCGGCTGGCAAACCAGCTTCTGATTCTTCCAACCAAGAGAATTCCGAACTGCAGAACGGTTAGTATGAATGAATATTATATCGCATCGGTACTATTATTAGAGACTTTGACTTCCTCTAATGCTCAGAGTAGTAGGATGTGTTACCTTGAATTCTTACATCAACTTCATGTATACCCACCATCCATGGCTATATTGGGTTTTTGGTTTTATATGCATAAAGGTGCACCTCAAGGAGCTAGTTACTAGAGACAGCGTCCAAAAACTAGATTTTTATCTCTTACCTTCTTTAGTTATTCCCAGTTTACAGAAAGTAGGAAGTGTTTGAAGTCTTTCAAAAATTTATCTCTTCTGTTCGTTTTTCCTTGTCTAGTGTTAAATAATGTTATTTTGAAGTTCCAAGGGTGACTCCCCATCGTGAGAAGATGACAGGTTTTGTTTTAAGAGAATCTCTAGCAGCTTTTGCTGCTGGATCAAACTCTTTTCAGGTTTTAGACTGAGGCCTTAGTCCTTTAGCTTTATCTTTTCTTGACTTTATGAGAGGAAAACACTAGTGTAACCATTTGGCAGATGCGGTGACGTTTTGCACATAATGTTTCTTGATGATTCATACTTGGTCTAATAACTGGCCTTTCTCTAGTGAAATTAAATTCTTCCCATCATTTATTGCCTTTTCTGTTGGTCTCATCATCATAAGCTGGCATTTTCATCTTGATATGTTGTTTTGACAATGCAGATATATCTCATGGTTTCATGGATGTAACTTTGAAAAATCATAACATTTTGGATGATAAGGGCACAGAAGCCTTGAGATCCTCAGAAAATAATTCATGTGCGTCAGTGGAATTGCATTTGTCTGATGCAGAGCATTCTTCCATAGAAGTGATTCCTACCGAGTCTGCAGTAAACCAAAGTTTTGATTTTGCGACTGATGTTACTGACTCTTATTCAGACATGCCATACTGGATGAGTACCGTGGAGCAACCTTTTTTAGTTTCTTCTCAGTACTTTCTTCCAGGAGATTATGATTCTTCAGTTTTTTCTGGAAATGGGGGCATGGCAATCAACATGATGATGCATGAAGGAGAGTTTCCATCCAATAGCCTGTCCTCAAGTACTACAATGAATTTGTATGCACAGGGGGCTACTGATCACAAATCAGTATCGAGACAGTCAGTCTCAAAGGATTTAAATCTTGATGGCTATCCAAATGTAAAGGGATGGAATCAGAATTGTGAAGGTGGAAACTTTATTTCATCGTTTGATGGAAACTATTCATTTCATGCTGATGAGCTTCGTATTGCTCAGACATCCATGGAGCTTCCAATGTCTACTGAGTTGAATTCATCTTGCAAAGAGCTTGTTAACCAAGTGAAGAATGAAACGATGGATTCACTGGTTGAATCTTGTAGTGGCCCATGGCAATCTATGATGGAGGAAAACATGTTTTTTCCATCCGGAAGAGTTTTTCATTCTGAAGATATGGTTTGTGGAACATCCAGCAGACCCTCCATTGGTGGCAGGTATCAGAATTTATACATAACTGATCAATATTCTCCCAATGATTATTCATCTAGTTTAAGCAATCAGCCTTTGGCTTTCATCAAGGATGATAGAGATCATAGATTGACTCCATGCAAGAGTGATATAGATTATCCACTAGTCAGCCCTGAATCAACTCATAGTAATTTGTCAGACAAGACCCAAGTGGAGGATGATCCAGATATCTGTATAATTGAAGATTTGAGTCATCCTGCACCATTAAACCGATCTCTTGTGGTTGGAAATTCTGTTATTGCTTCACAAAGTTGTTCTATAGTCGGTGGTTTTTCTGCTTATGTGGGATTAGGAAGCATGAGACCCAAGGCCAAAGACATGGACATATTAAAAGTTGCATTACAGGTTAGTTCTGTTTAGTTTTGTTTCTGCAAACTGTAACGTGCAGAAACAATGTCCTTGAATGTAAATGAACATTTATTCCTAGAGTTTTAAAACAATTTCTCTTTCCAACCTGTTTCCTCCATTTACAGTTGATTTTTTTTCTTAAATAACTAAATGGATCCTTTACTACGGTGAAAAGTATGGAAGTATGTTGACAATCTAACACAGTTTTATCAGAAGAAAAAAAAAATTGAAGCTGTATAATGAAATTGTTTGGGACTCCCTCATTTGTTGTTTTTGTCCATCGATGAAATTGTTTCATTGAGAAAAGAAAAATAAAAAATCAATAGTTTGTCCATCACTTACGAAACAGTATTTAGGTTGGGCTATCAGATGCTTGTGAGCTCTGACACAGACATGTTTGTTGTTAATTTTTTTATACATATTCTTCTGCATGTTTTTCAGACAAACAAAATATATATTTAACAGTTACTGACAAGGGTGTAGCTCATTTATTCTTTGCAATTACTGTTATTGCATTTCTCCTCGGCTTCTGTTTTGACGTTGCAACACAGACGCAAATTTTGTAGTTAATTATTGTTTGACATCCTGACTGTATCCACTTTTGTTGCATACATTCTTGTTTGTGTTCTGACATTTGGGATGGTATACTTCTAGTAAAACTTTAACCTAATTTTGTATCATCCTCTCTAGAGTTTGTTTATATGACGGAGAAGTTGATAAGACTCAGGTTATTGAGCTTTGCAGGATCTTTCTCAACCAAAATCAGAAACTAGTCCGCCTGATGGTGCTTTAGACGTTCCTCTTTTAAGGCATCAGGTTGTATATTCTTTTATTAACACAACCTTTTCTTCCTTATTTGTATTTTTTAAAAATAATATGTGGTTGTATTATTAACTTTCAAGGATGTTTGGACAGAGAATTGCTTTGTCATGGATGGTTGAGAAGGAGACATCTAGTGTATCCTGTGCTGGGGGGATTCTTGCTGATGATCAGGTTTCAACTAAGAATTTGTTTAATATATAGAGATACTATGAAGTTTATTTTCCTTTTTGTATTGACACGGTGAGTCACTTGCAGGGATTAGGGAAAACAATATCAACGATTGCTCTAATACTAAAGGAAAGGGCTCCTATTAAAGCTTGCTCAAATGATAGGCATAATGAGTTGGAGACTTTAAATTTGGATGATGATGATGATATACTTCCTGAGCTTGATGTGCCAAAACAAGAATTCTATCATCAAGTTTCACTGAGTAAGAATTTAACTATTGGCAAAAACAATTTGGTACAAGCTAAAGGCAGGCCAGCTGCTGGAACCCTTGTTGTTTGTCCAACAAGTGTATTGAGGCAGTGGGCTGATGAATTACATAATAAGGTTTCTAGTAAAGCTAATCTGTCAGTGCTTGTATACCATGGAAGTAGTCGAACTAAGGACCCTTGCGAGCTGGCCAAGTATGATGTTGTTCTTACAACCTACTCAATCGTGAGTATGGAGGTACCAAAGCAGTCTATTGTTGATGAAGAAGAAGATGAGAAACGCCATACAGAGGAACAAACTATTCTACCCATGCAATTTTCTCTAAGCAAGAAGAGGAAAAACTTCTCTGGTTCTGATAAGAAACAATCAAAGAATAAGAAAGCAGTGGACAATGAAATGTTTGAATCAGTTGCCCGCCCTCTTGCTAAAGTGAGGTGGTTCCGGGTTGTATTGGATGAAGCACAGAGTATCAAGAATCACAAGACACAGGTGGCTAGGGCCTGTTGGGGTCTGCGGGCAAAACGTAGGTGGTGCTTGTCAGGAACTCCTATTCAAAATGCTATTGATGATCTTTATAGCTATTTTAGGTTTCTCAAATATGATCCCTATGCTGCATATAATTCGTTCTGTTCAGCAATTAAGGTGCCAATCAACAAGAATCCATCCAAAGGATACAAAAAACTTCAAGCCATTTTAAGGACAATAATGTTACGTCGAACAAAAGGTGAGAACGCTTGA

mRNA sequence

ATGTTGATGGCGGCGGATGAGGCTTCTAATTTGCCTCTCCAGTATGGTTCTGATGATTTTGGTGAAGACATGTCCATTGACTATGAAACGTTAATACATCTACTGAGCGAGGATCTGGATCCTTTGCAGGATAAGCCAGAGGACTTGTCGCCATATAATGCATCGGCTGGCAAACCAGCTTCTGATTCTTCCAACCAAGAGAATTCCGAACTGCAGAACGATATATCTCATGGTTTCATGGATGTAACTTTGAAAAATCATAACATTTTGGATGATAAGGGCACAGAAGCCTTGAGATCCTCAGAAAATAATTCATGTGCGTCAGTGGAATTGCATTTGTCTGATGCAGAGCATTCTTCCATAGAAGTGATTCCTACCGAGTCTGCAGTAAACCAAAGTTTTGATTTTGCGACTGATGTTACTGACTCTTATTCAGACATGCCATACTGGATGAGTACCGTGGAGCAACCTTTTTTAGTTTCTTCTCAGTACTTTCTTCCAGGAGATTATGATTCTTCAGTTTTTTCTGGAAATGGGGGCATGGCAATCAACATGATGATGCATGAAGGAGAGTTTCCATCCAATAGCCTGTCCTCAAGTACTACAATGAATTTGTATGCACAGGGGGCTACTGATCACAAATCAGTATCGAGACAGTCAGTCTCAAAGGATTTAAATCTTGATGGCTATCCAAATGTAAAGGGATGGAATCAGAATTGTGAAGGTGGAAACTTTATTTCATCGTTTGATGGAAACTATTCATTTCATGCTGATGAGCTTCGTATTGCTCAGACATCCATGGAGCTTCCAATGTCTACTGAGTTGAATTCATCTTGCAAAGAGCTTGTTAACCAAGTGAAGAATGAAACGATGGATTCACTGGTTGAATCTTGTAGTGGCCCATGGCAATCTATGATGGAGGAAAACATGTTTTTTCCATCCGGAAGAGTTTTTCATTCTGAAGATATGGTTTGTGGAACATCCAGCAGACCCTCCATTGGTGGCAGTTTAAGCAATCAGCCTTTGGCTTTCATCAAGGATGATAGAGATCATAGATTGACTCCATGCAAGAGTGATATAGATTATCCACTAGTCAGCCCTGAATCAACTCATAGTAATTTGTCAGACAAGACCCAAGTGGAGGATGATCCAGATATCTGTATAATTGAAGATTTGAGTCATCCTGCACCATTAAACCGATCTCTTGTGGTTGGAAATTCTGTTATTGCTTCACAAAGTTGTTCTATAGTCGGTGGTTTTTCTGCTTATGTGGGATTAGGAAGCATGAGACCCAAGGCCAAAGACATGGACATATTAAAAGTTGCATTACAGGATCTTTCTCAACCAAAATCAGAAACTAGTCCGCCTGATGGTGCTTTAGACGTTCCTCTTTTAAGGCATCAGAGAATTGCTTTGTCATGGATGGTTGAGAAGGAGACATCTAGTGTATCCTGTGCTGGGGGGATTCTTGCTGATGATCAGGGATTAGGGAAAACAATATCAACGATTGCTCTAATACTAAAGGAAAGGGCTCCTATTAAAGCTTGCTCAAATGATAGGCATAATGAGTTGGAGACTTTAAATTTGGATGATGATGATGATATACTTCCTGAGCTTGATGTGCCAAAACAAGAATTCTATCATCAAGTTTCACTGAGTAAGAATTTAACTATTGGCAAAAACAATTTGGTACAAGCTAAAGGCAGGCCAGCTGCTGGAACCCTTGTTGTTTGTCCAACAAGTGTATTGAGGCAGTGGGCTGATGAATTACATAATAAGGTTTCTAGTAAAGCTAATCTGTCAGTGCTTGTATACCATGGAAGTAGTCGAACTAAGGACCCTTGCGAGCTGGCCAAGTATGATGTTGTTCTTACAACCTACTCAATCGTGAGTATGGAGGTACCAAAGCAGTCTATTGTTGATGAAGAAGAAGATGAGAAACGCCATACAGAGGAACAAACTATTCTACCCATGCAATTTTCTCTAAGCAAGAAGAGGAAAAACTTCTCTGGTTCTGATAAGAAACAATCAAAGAATAAGAAAGCAGTGGACAATGAAATGTTTGAATCAGTTGCCCGCCCTCTTGCTAAAGTGAGGTGGTTCCGGGTTGTATTGGATGAAGCACAGAGTATCAAGAATCACAAGACACAGGTGGCTAGGGCCTGTTGGGGTCTGCGGGCAAAACGTAGGTGGTGCTTGTCAGGAACTCCTATTCAAAATGCTATTGATGATCTTTATAGCTATTTTAGGTTTCTCAAATATGATCCCTATGCTGCATATAATTCGTTCTGTTCAGCAATTAAGGTGCCAATCAACAAGAATCCATCCAAAGGATACAAAAAACTTCAAGCCATTTTAAGGACAATAATGTTACGTCGAACAAAAGGTGAGAACGCTTGA

Coding sequence (CDS)

ATGTTGATGGCGGCGGATGAGGCTTCTAATTTGCCTCTCCAGTATGGTTCTGATGATTTTGGTGAAGACATGTCCATTGACTATGAAACGTTAATACATCTACTGAGCGAGGATCTGGATCCTTTGCAGGATAAGCCAGAGGACTTGTCGCCATATAATGCATCGGCTGGCAAACCAGCTTCTGATTCTTCCAACCAAGAGAATTCCGAACTGCAGAACGATATATCTCATGGTTTCATGGATGTAACTTTGAAAAATCATAACATTTTGGATGATAAGGGCACAGAAGCCTTGAGATCCTCAGAAAATAATTCATGTGCGTCAGTGGAATTGCATTTGTCTGATGCAGAGCATTCTTCCATAGAAGTGATTCCTACCGAGTCTGCAGTAAACCAAAGTTTTGATTTTGCGACTGATGTTACTGACTCTTATTCAGACATGCCATACTGGATGAGTACCGTGGAGCAACCTTTTTTAGTTTCTTCTCAGTACTTTCTTCCAGGAGATTATGATTCTTCAGTTTTTTCTGGAAATGGGGGCATGGCAATCAACATGATGATGCATGAAGGAGAGTTTCCATCCAATAGCCTGTCCTCAAGTACTACAATGAATTTGTATGCACAGGGGGCTACTGATCACAAATCAGTATCGAGACAGTCAGTCTCAAAGGATTTAAATCTTGATGGCTATCCAAATGTAAAGGGATGGAATCAGAATTGTGAAGGTGGAAACTTTATTTCATCGTTTGATGGAAACTATTCATTTCATGCTGATGAGCTTCGTATTGCTCAGACATCCATGGAGCTTCCAATGTCTACTGAGTTGAATTCATCTTGCAAAGAGCTTGTTAACCAAGTGAAGAATGAAACGATGGATTCACTGGTTGAATCTTGTAGTGGCCCATGGCAATCTATGATGGAGGAAAACATGTTTTTTCCATCCGGAAGAGTTTTTCATTCTGAAGATATGGTTTGTGGAACATCCAGCAGACCCTCCATTGGTGGCAGTTTAAGCAATCAGCCTTTGGCTTTCATCAAGGATGATAGAGATCATAGATTGACTCCATGCAAGAGTGATATAGATTATCCACTAGTCAGCCCTGAATCAACTCATAGTAATTTGTCAGACAAGACCCAAGTGGAGGATGATCCAGATATCTGTATAATTGAAGATTTGAGTCATCCTGCACCATTAAACCGATCTCTTGTGGTTGGAAATTCTGTTATTGCTTCACAAAGTTGTTCTATAGTCGGTGGTTTTTCTGCTTATGTGGGATTAGGAAGCATGAGACCCAAGGCCAAAGACATGGACATATTAAAAGTTGCATTACAGGATCTTTCTCAACCAAAATCAGAAACTAGTCCGCCTGATGGTGCTTTAGACGTTCCTCTTTTAAGGCATCAGAGAATTGCTTTGTCATGGATGGTTGAGAAGGAGACATCTAGTGTATCCTGTGCTGGGGGGATTCTTGCTGATGATCAGGGATTAGGGAAAACAATATCAACGATTGCTCTAATACTAAAGGAAAGGGCTCCTATTAAAGCTTGCTCAAATGATAGGCATAATGAGTTGGAGACTTTAAATTTGGATGATGATGATGATATACTTCCTGAGCTTGATGTGCCAAAACAAGAATTCTATCATCAAGTTTCACTGAGTAAGAATTTAACTATTGGCAAAAACAATTTGGTACAAGCTAAAGGCAGGCCAGCTGCTGGAACCCTTGTTGTTTGTCCAACAAGTGTATTGAGGCAGTGGGCTGATGAATTACATAATAAGGTTTCTAGTAAAGCTAATCTGTCAGTGCTTGTATACCATGGAAGTAGTCGAACTAAGGACCCTTGCGAGCTGGCCAAGTATGATGTTGTTCTTACAACCTACTCAATCGTGAGTATGGAGGTACCAAAGCAGTCTATTGTTGATGAAGAAGAAGATGAGAAACGCCATACAGAGGAACAAACTATTCTACCCATGCAATTTTCTCTAAGCAAGAAGAGGAAAAACTTCTCTGGTTCTGATAAGAAACAATCAAAGAATAAGAAAGCAGTGGACAATGAAATGTTTGAATCAGTTGCCCGCCCTCTTGCTAAAGTGAGGTGGTTCCGGGTTGTATTGGATGAAGCACAGAGTATCAAGAATCACAAGACACAGGTGGCTAGGGCCTGTTGGGGTCTGCGGGCAAAACGTAGGTGGTGCTTGTCAGGAACTCCTATTCAAAATGCTATTGATGATCTTTATAGCTATTTTAGGTTTCTCAAATATGATCCCTATGCTGCATATAATTCGTTCTGTTCAGCAATTAAGGTGCCAATCAACAAGAATCCATCCAAAGGATACAAAAAACTTCAAGCCATTTTAAGGACAATAATGTTACGTCGAACAAAAGGTGAGAACGCTTGA
Homology
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BLAST of CmoCh03G004970 vs. Swiss-Prot
Match: CHR28_ARATH (Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana GN=CHR28 PE=1 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-112
Identity = 224/389 (57.58%), Postives = 282/389 (72.49%), Query Frame = 1 

Query: 425 GLGSMRPKAKDMDIL-KVALQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVEKETSSV 484
           G+G  R    D  ++ + ALQ+L+QPKSE   P G L VPL++HQ+IAL+WM +KET+S+
Sbjct: 186 GIGEERNSENDERLIYQAALQELNQPKSEVDLPAGLLSVPLMKHQKIALAWMFQKETNSL 245

Query: 485 SCAGGILADDQGLGKTISTIALILKERAPIKACS-NDRHNELETLNLDDDDDILPELDVP 544
            C GGILADDQGLGKT+STIALILK+    K  S N  + E E L+LD DD+     + P
Sbjct: 246 HCMGGILADDQGLGKTVSTIALILKQMHEAKLKSKNSGNQEAEALDLDADDESENAFEKP 305

Query: 545 KQEFYHQVSLSKNLTIGKNNLVQAKG-------------RPAAGTLVVCPTSVLRQWADE 604
           + +  +   ++     G + + +AKG             RPAAGTL+VCP SV+RQWA E
Sbjct: 306 ESKASNGSGVN-----GDSGIKKAKGEEASTSTRKFNRKRPAAGTLIVCPASVVRQWARE 365

Query: 605 LHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDEEEDEKRH 664
           L  KV+ +A LSVL+YHG +RTKDP ELAKYDVV+TTY+IVS EVPKQ +VD++E+++++
Sbjct: 366 LDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEVPKQPLVDDDENDEKN 425

Query: 665 TEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDN--EMFESVARPLAKVRWFRVVLDE 724
           +E+   L   FS++KKRKN  G+ KK SK KK  +N  +  +  +  LAKV WFRVVLDE
Sbjct: 426 SEKYG-LASGFSINKKRKNVVGTTKK-SKKKKGNNNAGDSSDPDSGTLAKVGWFRVVLDE 485

Query: 725 AQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNSFCSAI 784
           AQ+IKNH+TQVARAC GLRAKRRWCLSGTPIQN IDDLYSYFRFLKYDPYA Y SFC  I
Sbjct: 486 AQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFCHQI 545

Query: 785 KVPINKNPSKGYKKLQAILRTIMLRRTKG 797
           K PI++N  +GYKKLQA+LR IMLRRTKG
Sbjct: 546 KGPISRNSLQGYKKLQAVLRAIMLRRTKG 567

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BLAST of CmoCh03G004970 vs. Swiss-Prot
Match: CHR27_ARATH (Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana GN=CHR27 PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.4e-104
Identity = 225/466 (48.28%), Postives = 295/466 (63.30%), Query Frame = 1 

Query: 358 SDIDYPLVSPESTHSNLSDKTQVEDDPDICIIEDLSHPAPLNRSLVVGNSVIASQSCSIV 417
           +D  +P VS     S   D        +I I   ++    L  SL  G S          
Sbjct: 176 ADYSHPAVSAVGNKSTFGDHYSGAH-AEIGIQRGVNGVRILPPSLTHGTSASVLHHAGSS 235

Query: 418 GGFSAYVGLGSMRPKAKDMDILKVALQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVE 477
                + G     P   +  + + ALQ L+QP +E+  P G L VPL+RHQ+IAL+WM +
Sbjct: 236 DPMHRFGGGEDRNPDNDERLVYQAALQVLNQPMTESDLPPGTLSVPLMRHQKIALAWMFQ 295

Query: 478 KETSSVSCAGGILADDQGLGKTISTIALILKER--APIKACSNDRHNELETLNLDDDDD- 537
           KETSS +C GGILADDQGLGKT+STIALILK++  + +K+ S+ +  E E L LD DD+ 
Sbjct: 296 KETSSFNCPGGILADDQGLGKTVSTIALILKQKIVSQLKSESSCK-QETEALVLDADDES 355

Query: 538 ----------ILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKG-------------RPA 597
                     + PEL V        +S   N     +++ +A+              RPA
Sbjct: 356 DNAKHESGSHVKPELKVSSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQWKRPA 415

Query: 598 AGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVS 657
           AGTL+VCP SV+RQWA EL  KVS ++ LSVLVYHGS+RTKDP ELA+YDVV+TTY+IV+
Sbjct: 416 AGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVT 475

Query: 658 MEVPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKK-QSKNKKAVDNEMFES 717
            E P + +VDE+E+++++T+    L   FS +KKRK   G+ KK + + +K+ ++   E 
Sbjct: 476 NEAPNKFLVDEDENDEKNTDRYG-LASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSEP 535

Query: 718 VARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFR 777
              PL KV WFR+VLDEAQ+IKN++TQ+AR+C  LRAKRRWCLSGTPIQN IDDLYSYFR
Sbjct: 536 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 595

Query: 778 FLKYDPYAAYNSFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTKG 797
           FL+YDPYA Y SF S IKVPI++N  +GYKKLQA+LR IMLRRTKG
Sbjct: 596 FLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKG 638

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BLAST of CmoCh03G004970 vs. Swiss-Prot
Match: TTF2_MOUSE (Transcription termination factor 2 OS=Mus musculus GN=Ttf2 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 7.5e-32
Identity = 101/362 (27.90%), Postives = 173/362 (47.79%), Query Frame = 1 

Query: 436 MDILKVALQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVEKETSSVSCAGGILADDQG 495
           +D L  +L+      +    P G L VPLL HQ+ AL+W++ +E+      GGILADD G
Sbjct: 519 IDELHRSLKSCPGETAVAEDPAG-LKVPLLLHQKQALAWLLWRESQKPQ--GGILADDMG 578

Query: 496 LGKTISTIALILKERAPIKACSNDRHNELETLNLDDDDDILPELDVPKQEFYHQVSLSKN 555
           LGKT++           + A    + N+ ++   +  + +                LSKN
Sbjct: 579 LGKTLT-----------MIALILTKKNQQKSKEKERSEPV--------------TWLSKN 638

Query: 556 LTIGKNNLVQAKGRPAAGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPC 615
                     +    ++GTL+VCP S++  W +E+  +V+S   L + +YHG +R++   
Sbjct: 639 ---------DSSVFTSSGTLIVCPASLIHHWKNEVEKRVTSN-RLRIYLYHGPNRSRHAK 698

Query: 616 ELAKYDVVLTTYSIVSMEVPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKK 675
            L+ YD+V+TTY                          ++L  +   +K+     G+   
Sbjct: 699 VLSTYDIVITTY--------------------------SLLAKEIPTTKQEGEVPGA--- 758

Query: 676 QSKNKKAVDNEMFESVARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSG 735
                    N   E  + PL +V W R++LDEA ++KN + Q + A   L+A+ RW ++G
Sbjct: 759 ---------NLSVEGTSAPLLQVVWARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTG 800

Query: 736 TPIQNAIDDLYSYFRFLKYDPYAAYNSFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 795
           TPIQN + D+YS  +FL+  P+  +    S  K  ++    KG ++L  + ++++LRRTK
Sbjct: 819 TPIQNNLLDMYSLMKFLRCSPFDEF----SLWKSQVDNGSMKGGERLSILTKSLLLRRTK 800

Query: 796 GE 798
            +
Sbjct: 879 DQ 800

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BLAST of CmoCh03G004970 vs. Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.2e-26
Identity = 98/313 (31.31%), Postives = 143/313 (45.69%), Query Frame = 1 

Query: 487 GGILADDQGLGKTISTIALIL----KERAPIKACSNDRHNELETLNLDDDDDILPELDVP 546
           GGILAD  GLGKT+ TI+L+L    K  +    C N   +++ + ++DD       L  P
Sbjct: 414 GGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDD-------LTSP 473

Query: 547 KQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTSVLRQWADELHNKVSSKANLSV 606
                  V  +K L   K  L Q       G L+VCP ++L Q                 
Sbjct: 474 P------VKATKFLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQ----------------- 533

Query: 607 LVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDEEEDEKRHTEEQTILPMQFSL 666
                    K   E+      L+ Y       PK + +  + D    T    +L  +FS 
Sbjct: 534 --------WKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVITT--YGVLTSEFS- 593

Query: 667 SKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWFRVVLDEAQSIKNHKTQVARAC 726
                            + + D+E        +  VRWFR+VLDEA +IKN K+Q++ A 
Sbjct: 594 ----------------QENSADHE-------GIYAVRWFRIVLDEAHTIKNSKSQISLAA 653

Query: 727 WGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNSFCSAIKVPINKNPSKGYKKL 786
             L A RRWCL+GTPIQN ++DLYS  RFL+ +P+  +  +   ++ P  +   +G K +
Sbjct: 654 AALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLV 662

Query: 787 QAILRTIMLRRTK 796
           Q+IL+ IMLRRTK
Sbjct: 714 QSILKPIMLRRTK 662

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BLAST of CmoCh03G004970 vs. Swiss-Prot
Match: YBMA_SCHPO (Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC582.10c PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.1e-26
Identity = 76/223 (34.08%), Postives = 115/223 (51.57%), Query Frame = 1 

Query: 574 TLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSME 633
           TLVV P S+++QW  E    V +K+ L+ +VYHG+SR K    + +YDVV+TTY I+  E
Sbjct: 291 TLVVAPLSLIKQWESE----VQTKSKLTAIVYHGASRYKLLKVIHEYDVVITTYQILVSE 350

Query: 634 VPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVAR 693
                                             N +G+D K     K+     +E    
Sbjct: 351 WVSH------------------------------NTTGTDGKSPTEAKS-----YEKKKP 410

Query: 694 PLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLK 753
            L    W+R++LDEA +IKN  ++ A AC  L+   RWCL+GTP+QN +D+LYS  +FL 
Sbjct: 411 SLFAFYWWRIILDEAHTIKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLH 470

Query: 754 YDPYAAYNSFCSAIKVPINKNPSK-GYKKLQAILRTIMLRRTK 796
            +P+   + +   I +P+ +      +K+L+ +L  IMLRRTK
Sbjct: 471 INPFNDQSVWKDQISLPLCQGEENLVFKRLRMLLSVIMLRRTK 474

[Close]
BLAST of CmoCh03G004970 vs. TrEMBL
Match: A0A0A0KN95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517140 PE=4 SV=1)

HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 653/813 (80.32%), Postives = 697/813 (85.73%), Query Frame = 1 

Query: 1   MLMAADEASNLPLQYGSDDFGEDMSIDYETLIHLLSEDLDPLQDKPEDLSPYNASAGKPA 60
           +++ ADEASN PLQY  DDF EDMS++YE ++HLLSEDLDPLQ K EDLSP NAS G+PA
Sbjct: 50  IILMADEASNFPLQYADDDFDEDMSMEYEKILHLLSEDLDPLQIKTEDLSPNNASTGQPA 109

Query: 61  SDSSNQENSELQNDISHGFMDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSS 120
            DSSNQEN +LQNDISHGFMDVTLKNH+ LD KGTE LRSSENNSCASVEL   DAEHSS
Sbjct: 110 FDSSNQENFQLQNDISHGFMDVTLKNHDSLDGKGTETLRSSENNSCASVELPSFDAEHSS 169

Query: 121 IEVIPTESAVNQSFDFATDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGG 180
            EV PTES VN SFDF TDVT+SYS MPYWMSTVEQPFLVSSQY  PGDYDS + SGNG 
Sbjct: 170 KEVFPTESTVNPSFDFVTDVTNSYSTMPYWMSTVEQPFLVSSQYLFPGDYDSPLVSGNGD 229

Query: 181 MAINMMMHEGEFPSNSLSSSTTMNLYAQGATDHKSVSRQSVSKDLNLDGYPNVKGWNQNC 240
           M +NMM H+ EFPSNSL SSTTM+LYAQGATDHKSVSR+SVSKDL LD Y NVK W+QNC
Sbjct: 230 MTVNMM-HDVEFPSNSLCSSTTMDLYAQGATDHKSVSRESVSKDLILDRYSNVKRWDQNC 289

Query: 241 EGGNFISSFDGNYSFHADELRIAQTSMELPMSTELNSSCKELVNQVKNETMDSLVESCSG 300
           E GNFISSFDG Y FH D L I Q SM +PMSTELNSSCKELV+Q+KNETMDSLVESCSG
Sbjct: 290 ESGNFISSFDGKYPFHVDNLHIGQASMGIPMSTELNSSCKELVSQMKNETMDSLVESCSG 349

Query: 301 PWQSMMEENMFFPSGRVFH------------SED------MVCGTSSRPSIGGSLSNQPL 360
           PWQSMMEEN+FF S RVF             S D       +    S      +LSNQPL
Sbjct: 350 PWQSMMEENLFFQSQRVFRSEDMVCGTSGRLSNDGRYQNLYITDQYSPNGHSSNLSNQPL 409

Query: 361 AFIKDDRDHRLTPCKSDIDYPLVSPESTHSNLSDKTQVEDDPDICIIEDLSHPAPLNRSL 420
            FIKDDRDH+L+  KSDID+P VSPESTHSNLSD+  VEDDPDICIIED+SHPAP NRSL
Sbjct: 410 VFIKDDRDHKLSVRKSDIDHPQVSPESTHSNLSDRAHVEDDPDICIIEDMSHPAPSNRSL 469

Query: 421 VVGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMDILKVALQDLSQPKSETSPPDGALDV 480
           +VG SV ASQS SIV G S Y+G+GS+R KAKD+DILKVALQDLSQPKSETSPPDGALDV
Sbjct: 470 MVGKSV-ASQSFSIVSGSSTYMGIGSLRQKAKDIDILKVALQDLSQPKSETSPPDGALDV 529

Query: 481 PLLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERAPIKACSNDRHN 540
           PLLRHQRIALSWMV+KETSSV CAGGILADDQGLGKTISTIALILKERAPI+AC   +H 
Sbjct: 530 PLLRHQRIALSWMVQKETSSVPCAGGILADDQGLGKTISTIALILKERAPIRACPTVKHE 589

Query: 541 ELETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTSV 600
           ELETLNLD+DDDI PE D PKQEF HQVS SK+LT+ KN  VQAKGRPAAGTLVVCPTSV
Sbjct: 590 ELETLNLDEDDDIHPEHDGPKQEFSHQVSPSKDLTLSKNTSVQAKGRPAAGTLVVCPTSV 649

Query: 601 LRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDE 660
           LRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQS+VDE
Sbjct: 650 LRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSVVDE 709

Query: 661 EEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWFR 720
           E+DEK +TEEQ ILP   S SKKRKNFSGSDKK SKNKK VDNE+FESVARPLAKVRWFR
Sbjct: 710 EDDEKHNTEEQAILPSHLSSSKKRKNFSGSDKKHSKNKKGVDNEVFESVARPLAKVRWFR 769

Query: 721 VVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNS 780
           VVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAY S
Sbjct: 770 VVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYKS 829

Query: 781 FCSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 796
           FCSAIK PINKNP+KGYKKLQAILRTIMLRRTK
Sbjct: 830 FCSAIKFPINKNPAKGYKKLQAILRTIMLRRTK 860

[Close]
BLAST of CmoCh03G004970 vs. TrEMBL
Match: F6GZ87_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00700 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 2.8e-158
Identity = 307/473 (64.90%), Postives = 370/473 (78.22%), Query Frame = 1 

Query: 331 PSIGGS-LSNQPLAFIKDDRDHRLTPCKSDIDY-PLVSPESTHSN-LSDKTQVEDDPDIC 390
           PS+  S +SN+ L +IKD+++ +L   KS   Y   VSPES  SN L  ++ ++DD DIC
Sbjct: 502 PSVKQSTVSNKQLDYIKDEKEGKLIQPKSMGSYLSKVSPESIQSNSLDHRSHIDDDTDIC 561

Query: 391 IIEDLSHPAPLNRSLVVGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMDIL-KVALQDL 450
           I+ED+S P   N SL++G S++++Q  S     +  VG   MR +  D  ++ +VALQDL
Sbjct: 562 ILEDISEPVRSNSSLLLGKSLVSTQRYSDSLHNTGVVG---MRNRTNDERLIFRVALQDL 621

Query: 451 SQPKSETSPPDGALDVPLLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALI 510
           SQPKSE SPPDG L VPLLRHQRIALSWMV+KET+S+ C+GGILADDQGLGKT+STIALI
Sbjct: 622 SQPKSEASPPDGVLTVPLLRHQRIALSWMVQKETASLHCSGGILADDQGLGKTVSTIALI 681

Query: 511 LKER-APIKACSND-RHNELETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNN-L 570
           LKER    +AC  D + +ELETLNLD+DDD +PELD  KQ       +S   ++ K N  
Sbjct: 682 LKERPTSSRACQEDMKQSELETLNLDEDDDKVPELDGTKQAADSCEVMSHGSSMKKENAF 741

Query: 571 VQAKGRPAAGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVV 630
           VQ KGRPAAGTLVVCPTSVLRQWA+EL +KV+SKANLSVLVYHGS+RTKDPCELA+YDVV
Sbjct: 742 VQGKGRPAAGTLVVCPTSVLRQWAEELRSKVTSKANLSVLVYHGSNRTKDPCELARYDVV 801

Query: 631 LTTYSIVSMEVPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAV 690
           LTTYSIVSMEVPKQ +VD++++EK   E   + P + S +KKRK    SDKK  K+KKA+
Sbjct: 802 LTTYSIVSMEVPKQPLVDKDDEEKVKPEAH-VSPTELSSNKKRKYPPSSDKKCLKDKKAM 861

Query: 691 DNEMFESVARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAID 750
           D  + ESVARPLA+V WFRVVLDEAQSIKNH+TQVARACWGLRAKRRWCLSGTPIQNA+D
Sbjct: 862 DGALLESVARPLARVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAVD 921

Query: 751 DLYSYFRFLKYDPYAAYNSFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTKG 797
           DLYSYFRFL+YDPYA Y SFCS IKVPI +NP+ GY+KLQA+L+TIMLRRTKG
Sbjct: 922 DLYSYFRFLRYDPYAVYKSFCSTIKVPITRNPTNGYRKLQAVLKTIMLRRTKG 970

[Close]
BLAST of CmoCh03G004970 vs. TrEMBL
Match: A0A0R0G663_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G070100 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 7.6e-156
Identity = 352/754 (46.68%), Postives = 468/754 (62.07%), Query Frame = 1 

Query: 61  SDSSNQENSELQNDISHGFMDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSS 120
           + S +  +  +  +I   F D      +I+   G +     EN+SC S E+   DA+ SS
Sbjct: 66  AQSEHASHGSIIENIDLNFGDYETYMEDIIGLSGKQ-----ENDSCTSFEMSFVDADRSS 125

Query: 121 IEVIPTESAVNQSFDFATDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGG 180
                T+S++ Q  +   D +D Y  +  +    ++P + +S   LP      V   N  
Sbjct: 126 RVATSTDSSICQGSNVPNDFSDYYPSLNCYQGMDDRPVVANSSGCLPNGVYPHVRK-NEE 185

Query: 181 MAINMMMHEGEF---PSNSLSSSTTMNLYAQGATDHKSVSRQSVSKDLNLDGYPNVKGWN 240
           M  NM + + E     S+ + SS    +  Q +    + S+ + S   N+    N     
Sbjct: 186 MVRNMKVAKMELFADTSSGMHSSINGGISFQDSQFRFADSKYASSFPGNVLFEDNASVEL 245

Query: 241 QNCEGGNFISSFDGNYSFHADELRIAQTSMELPMSTELNSSCKELVNQVKNETMDSLVES 300
             C  G++IS    + +  A+     +  + +P    ++S+  E     + + +  +  +
Sbjct: 246 STC--GSYISREGQSLTVKAE-----RDELIMPYQNSVHSNDAEFNVGQEMKQLPGIFPA 305

Query: 301 --CSG-PWQSMMEENMFFPSGRVFHSEDMVCGTSSRPSIG-GSLSNQPL------AFIKD 360
             C G  +    ++     S +  + +D + G ++      G+L+ +PL      A I  
Sbjct: 306 VGCQGNDFFKCRDKVTIVTSQKAKYYQDGIDGAANNFQANMGNLNLKPLDKSLYNAQISI 365

Query: 361 DRDHRLTPCKSDIDYPLVSPESTHSNLS----DKTQVEDDPDICIIEDLSHPAPLNRSLV 420
               +     S+ +   +   S  S LS    +++ +EDD D+CIIED+SHPAP++RS V
Sbjct: 366 ASGKQYNCVMSEGEGKAIEHRSIDSQLSKGSIERSIIEDDSDVCIIEDISHPAPISRSTV 425

Query: 421 VGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMD-ILKVALQDLSQPKSETSPPDGALDV 480
           +GNS+I SQS    GG++    +GSM PKA+D   IL+VALQDLSQPKSE SPPDG L V
Sbjct: 426 LGNSLITSQSSR--GGYTHSYMVGSMGPKARDEQYILRVALQDLSQPKSEVSPPDGLLAV 485

Query: 481 PLLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERAPI-KACSNDRH 540
           PLLRHQRIALSWMV+KETSS+ C+GGILADDQGLGKT+STI LILKER P+   C+N + 
Sbjct: 486 PLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVSTIGLILKERPPLLNKCNNAQK 545

Query: 541 NELETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTS 600
           +ELETLNLD DDD LPE  + K E       S+N     N L+ AKGRP+AGTL+VCPTS
Sbjct: 546 SELETLNLDADDDQLPENGIVKNESNMCQVSSRNPNQNMNLLLHAKGRPSAGTLIVCPTS 605

Query: 601 VLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVD 660
           VLRQWA+ELHNKV+ KA LSVLVYHGS+RTK+P ELAKYDVVLTTYSIVSMEVPKQ +VD
Sbjct: 606 VLRQWAEELHNKVTCKAKLSVLVYHGSNRTKNPHELAKYDVVLTTYSIVSMEVPKQPLVD 665

Query: 661 EEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWF 720
           ++++EK   ++  +       SKKRK            KK +D+ M E+VARPLAKV WF
Sbjct: 666 KDDEEKGTYDDHAVS------SKKRK----CPPSSKSGKKGLDSAMLEAVARPLAKVAWF 725

Query: 721 RVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYN 780
           RVVLDEAQSIKNH+TQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFL+YDPYA Y 
Sbjct: 726 RVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYT 785

Query: 781 SFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 796
           SFCS IK+PI+++PSKGY+KLQA+L+TIMLRRTK
Sbjct: 786 SFCSTIKIPISRSPSKGYRKLQAVLKTIMLRRTK 794

[Close]
BLAST of CmoCh03G004970 vs. TrEMBL
Match: K7MA24_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G070100 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 7.6e-156
Identity = 352/754 (46.68%), Postives = 468/754 (62.07%), Query Frame = 1 

Query: 61  SDSSNQENSELQNDISHGFMDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSS 120
           + S +  +  +  +I   F D      +I+   G +     EN+SC S E+   DA+ SS
Sbjct: 169 AQSEHASHGSIIENIDLNFGDYETYMEDIIGLSGKQ-----ENDSCTSFEMSFVDADRSS 228

Query: 121 IEVIPTESAVNQSFDFATDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGG 180
                T+S++ Q  +   D +D Y  +  +    ++P + +S   LP      V   N  
Sbjct: 229 RVATSTDSSICQGSNVPNDFSDYYPSLNCYQGMDDRPVVANSSGCLPNGVYPHVRK-NEE 288

Query: 181 MAINMMMHEGEF---PSNSLSSSTTMNLYAQGATDHKSVSRQSVSKDLNLDGYPNVKGWN 240
           M  NM + + E     S+ + SS    +  Q +    + S+ + S   N+    N     
Sbjct: 289 MVRNMKVAKMELFADTSSGMHSSINGGISFQDSQFRFADSKYASSFPGNVLFEDNASVEL 348

Query: 241 QNCEGGNFISSFDGNYSFHADELRIAQTSMELPMSTELNSSCKELVNQVKNETMDSLVES 300
             C  G++IS    + +  A+     +  + +P    ++S+  E     + + +  +  +
Sbjct: 349 STC--GSYISREGQSLTVKAE-----RDELIMPYQNSVHSNDAEFNVGQEMKQLPGIFPA 408

Query: 301 --CSG-PWQSMMEENMFFPSGRVFHSEDMVCGTSSRPSIG-GSLSNQPL------AFIKD 360
             C G  +    ++     S +  + +D + G ++      G+L+ +PL      A I  
Sbjct: 409 VGCQGNDFFKCRDKVTIVTSQKAKYYQDGIDGAANNFQANMGNLNLKPLDKSLYNAQISI 468

Query: 361 DRDHRLTPCKSDIDYPLVSPESTHSNLS----DKTQVEDDPDICIIEDLSHPAPLNRSLV 420
               +     S+ +   +   S  S LS    +++ +EDD D+CIIED+SHPAP++RS V
Sbjct: 469 ASGKQYNCVMSEGEGKAIEHRSIDSQLSKGSIERSIIEDDSDVCIIEDISHPAPISRSTV 528

Query: 421 VGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMD-ILKVALQDLSQPKSETSPPDGALDV 480
           +GNS+I SQS    GG++    +GSM PKA+D   IL+VALQDLSQPKSE SPPDG L V
Sbjct: 529 LGNSLITSQSSR--GGYTHSYMVGSMGPKARDEQYILRVALQDLSQPKSEVSPPDGLLAV 588

Query: 481 PLLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERAPI-KACSNDRH 540
           PLLRHQRIALSWMV+KETSS+ C+GGILADDQGLGKT+STI LILKER P+   C+N + 
Sbjct: 589 PLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVSTIGLILKERPPLLNKCNNAQK 648

Query: 541 NELETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTS 600
           +ELETLNLD DDD LPE  + K E       S+N     N L+ AKGRP+AGTL+VCPTS
Sbjct: 649 SELETLNLDADDDQLPENGIVKNESNMCQVSSRNPNQNMNLLLHAKGRPSAGTLIVCPTS 708

Query: 601 VLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVD 660
           VLRQWA+ELHNKV+ KA LSVLVYHGS+RTK+P ELAKYDVVLTTYSIVSMEVPKQ +VD
Sbjct: 709 VLRQWAEELHNKVTCKAKLSVLVYHGSNRTKNPHELAKYDVVLTTYSIVSMEVPKQPLVD 768

Query: 661 EEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWF 720
           ++++EK   ++  +       SKKRK            KK +D+ M E+VARPLAKV WF
Sbjct: 769 KDDEEKGTYDDHAVS------SKKRK----CPPSSKSGKKGLDSAMLEAVARPLAKVAWF 828

Query: 721 RVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYN 780
           RVVLDEAQSIKNH+TQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFL+YDPYA Y 
Sbjct: 829 RVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYT 888

Query: 781 SFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 796
           SFCS IK+PI+++PSKGY+KLQA+L+TIMLRRTK
Sbjct: 889 SFCSTIKIPISRSPSKGYRKLQAVLKTIMLRRTK 897

[Close]
BLAST of CmoCh03G004970 vs. TrEMBL
Match: K7MA23_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G070100 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 7.6e-156
Identity = 352/754 (46.68%), Postives = 468/754 (62.07%), Query Frame = 1 

Query: 61  SDSSNQENSELQNDISHGFMDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSS 120
           + S +  +  +  +I   F D      +I+   G +     EN+SC S E+   DA+ SS
Sbjct: 169 AQSEHASHGSIIENIDLNFGDYETYMEDIIGLSGKQ-----ENDSCTSFEMSFVDADRSS 228

Query: 121 IEVIPTESAVNQSFDFATDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGG 180
                T+S++ Q  +   D +D Y  +  +    ++P + +S   LP      V   N  
Sbjct: 229 RVATSTDSSICQGSNVPNDFSDYYPSLNCYQGMDDRPVVANSSGCLPNGVYPHVRK-NEE 288

Query: 181 MAINMMMHEGEF---PSNSLSSSTTMNLYAQGATDHKSVSRQSVSKDLNLDGYPNVKGWN 240
           M  NM + + E     S+ + SS    +  Q +    + S+ + S   N+    N     
Sbjct: 289 MVRNMKVAKMELFADTSSGMHSSINGGISFQDSQFRFADSKYASSFPGNVLFEDNASVEL 348

Query: 241 QNCEGGNFISSFDGNYSFHADELRIAQTSMELPMSTELNSSCKELVNQVKNETMDSLVES 300
             C  G++IS    + +  A+     +  + +P    ++S+  E     + + +  +  +
Sbjct: 349 STC--GSYISREGQSLTVKAE-----RDELIMPYQNSVHSNDAEFNVGQEMKQLPGIFPA 408

Query: 301 --CSG-PWQSMMEENMFFPSGRVFHSEDMVCGTSSRPSIG-GSLSNQPL------AFIKD 360
             C G  +    ++     S +  + +D + G ++      G+L+ +PL      A I  
Sbjct: 409 VGCQGNDFFKCRDKVTIVTSQKAKYYQDGIDGAANNFQANMGNLNLKPLDKSLYNAQISI 468

Query: 361 DRDHRLTPCKSDIDYPLVSPESTHSNLS----DKTQVEDDPDICIIEDLSHPAPLNRSLV 420
               +     S+ +   +   S  S LS    +++ +EDD D+CIIED+SHPAP++RS V
Sbjct: 469 ASGKQYNCVMSEGEGKAIEHRSIDSQLSKGSIERSIIEDDSDVCIIEDISHPAPISRSTV 528

Query: 421 VGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMD-ILKVALQDLSQPKSETSPPDGALDV 480
           +GNS+I SQS    GG++    +GSM PKA+D   IL+VALQDLSQPKSE SPPDG L V
Sbjct: 529 LGNSLITSQSSR--GGYTHSYMVGSMGPKARDEQYILRVALQDLSQPKSEVSPPDGLLAV 588

Query: 481 PLLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERAPI-KACSNDRH 540
           PLLRHQRIALSWMV+KETSS+ C+GGILADDQGLGKT+STI LILKER P+   C+N + 
Sbjct: 589 PLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVSTIGLILKERPPLLNKCNNAQK 648

Query: 541 NELETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTS 600
           +ELETLNLD DDD LPE  + K E       S+N     N L+ AKGRP+AGTL+VCPTS
Sbjct: 649 SELETLNLDADDDQLPENGIVKNESNMCQVSSRNPNQNMNLLLHAKGRPSAGTLIVCPTS 708

Query: 601 VLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVD 660
           VLRQWA+ELHNKV+ KA LSVLVYHGS+RTK+P ELAKYDVVLTTYSIVSMEVPKQ +VD
Sbjct: 709 VLRQWAEELHNKVTCKAKLSVLVYHGSNRTKNPHELAKYDVVLTTYSIVSMEVPKQPLVD 768

Query: 661 EEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWF 720
           ++++EK   ++  +       SKKRK            KK +D+ M E+VARPLAKV WF
Sbjct: 769 KDDEEKGTYDDHAVS------SKKRK----CPPSSKSGKKGLDSAMLEAVARPLAKVAWF 828

Query: 721 RVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYN 780
           RVVLDEAQSIKNH+TQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFL+YDPYA Y 
Sbjct: 829 RVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYT 888

Query: 781 SFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 796
           SFCS IK+PI+++PSKGY+KLQA+L+TIMLRRTK
Sbjct: 889 SFCSTIKIPISRSPSKGYRKLQAVLKTIMLRRTK 897

[Close]
BLAST of CmoCh03G004970 vs. TAIR10
Match: AT1G61140.1 (AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 466.8 bits (1200), Expect = 2.6e-131
Identity = 260/451 (57.65%), Postives = 319/451 (70.73%), Query Frame = 1 

Query: 348 DRDHRLTPCKSDIDYPLVSPESTHSNLSDK-TQVEDDPDICIIEDLSHPAPLNRSLVVGN 407
           DR++ + P   D  +   S ES  S+ S+  +  +DD D+CIIE     A  +R L +  
Sbjct: 442 DREY-IQPRGIDSQFSNASFESVQSHSSECISDSDDDSDVCIIEPYGQSAIPHRPLAMKM 501

Query: 408 SVIASQSCSIVGGFSAYVGLGSMRPKAKDMDILKVALQDLSQPKSETSPPDGALDVPLLR 467
            V++S+  ++   F+   GL  ++   ++M I + ALQDL+QP SE   PDG L VPLLR
Sbjct: 502 PVVSSEYSTVSHNFNQSGGL-KLQSNKENM-IFQAALQDLTQPNSEAILPDGVLTVPLLR 561

Query: 468 HQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERA-PIKACSNDRHNELE 527
           HQRIALSWM +KETS   C+GGILADDQGLGKT+STIALILKER+ P +AC      E+ 
Sbjct: 562 HQRIALSWMAQKETSGFPCSGGILADDQGLGKTVSTIALILKERSKPAQACEESTKKEIF 621

Query: 528 TLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTSVLRQ 587
            L  +  +    +     + F H   LS    +G +++ +  GRPAAGTLVVCPTSV+RQ
Sbjct: 622 DLESETGECAPLKPSGRSKHFEHSQLLSNENKVGGDSVGKVTGRPAAGTLVVCPTSVMRQ 681

Query: 588 WADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDEEED 647
           WADELH KV+S+ANLSVLVYHGSSRTKDP ELAKYDVV+TT+SIVSMEVPKQ +VD+E++
Sbjct: 682 WADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDE 741

Query: 648 EKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWFRVVL 707
           EK    +       F  +KKRK    S KK SK KK       E ++ PLAKV WFRVVL
Sbjct: 742 EKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKV------EFLSGPLAKVSWFRVVL 801

Query: 708 DEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNSFCS 767
           DEAQSIKN+KTQVARACWGLRAKRRWCLSGTPIQN+IDDLYSYFRFLKYDPY++Y  FCS
Sbjct: 802 DEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCS 861

Query: 768 AIKVPINKNPSKGYKKLQAILRTIMLRRTKG 797
            IK PI +NP KGY+KLQAIL+T+MLRRTKG
Sbjct: 862 TIKNPITRNPVKGYQKLQAILKTVMLRRTKG 883

[Close]
BLAST of CmoCh03G004970 vs. TAIR10
Match: AT1G50410.1 (AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 409.1 bits (1050), Expect = 6.4e-114
Identity = 224/389 (57.58%), Postives = 282/389 (72.49%), Query Frame = 1 

Query: 425 GLGSMRPKAKDMDIL-KVALQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVEKETSSV 484
           G+G  R    D  ++ + ALQ+L+QPKSE   P G L VPL++HQ+IAL+WM +KET+S+
Sbjct: 186 GIGEERNSENDERLIYQAALQELNQPKSEVDLPAGLLSVPLMKHQKIALAWMFQKETNSL 245

Query: 485 SCAGGILADDQGLGKTISTIALILKERAPIKACS-NDRHNELETLNLDDDDDILPELDVP 544
            C GGILADDQGLGKT+STIALILK+    K  S N  + E E L+LD DD+     + P
Sbjct: 246 HCMGGILADDQGLGKTVSTIALILKQMHEAKLKSKNSGNQEAEALDLDADDESENAFEKP 305

Query: 545 KQEFYHQVSLSKNLTIGKNNLVQAKG-------------RPAAGTLVVCPTSVLRQWADE 604
           + +  +   ++     G + + +AKG             RPAAGTL+VCP SV+RQWA E
Sbjct: 306 ESKASNGSGVN-----GDSGIKKAKGEEASTSTRKFNRKRPAAGTLIVCPASVVRQWARE 365

Query: 605 LHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDEEEDEKRH 664
           L  KV+ +A LSVL+YHG +RTKDP ELAKYDVV+TTY+IVS EVPKQ +VD++E+++++
Sbjct: 366 LDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEVPKQPLVDDDENDEKN 425

Query: 665 TEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDN--EMFESVARPLAKVRWFRVVLDE 724
           +E+   L   FS++KKRKN  G+ KK SK KK  +N  +  +  +  LAKV WFRVVLDE
Sbjct: 426 SEKYG-LASGFSINKKRKNVVGTTKK-SKKKKGNNNAGDSSDPDSGTLAKVGWFRVVLDE 485

Query: 725 AQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNSFCSAI 784
           AQ+IKNH+TQVARAC GLRAKRRWCLSGTPIQN IDDLYSYFRFLKYDPYA Y SFC  I
Sbjct: 486 AQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFCHQI 545

Query: 785 KVPINKNPSKGYKKLQAILRTIMLRRTKG 797
           K PI++N  +GYKKLQA+LR IMLRRTKG
Sbjct: 546 KGPISRNSLQGYKKLQAVLRAIMLRRTKG 567

[Close]
BLAST of CmoCh03G004970 vs. TAIR10
Match: AT3G20010.1 (AT3G20010.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 379.8 bits (974), Expect = 4.2e-105
Identity = 225/466 (48.28%), Postives = 295/466 (63.30%), Query Frame = 1 

Query: 358 SDIDYPLVSPESTHSNLSDKTQVEDDPDICIIEDLSHPAPLNRSLVVGNSVIASQSCSIV 417
           +D  +P VS     S   D        +I I   ++    L  SL  G S          
Sbjct: 176 ADYSHPAVSAVGNKSTFGDHYSGAH-AEIGIQRGVNGVRILPPSLTHGTSASVLHHAGSS 235

Query: 418 GGFSAYVGLGSMRPKAKDMDILKVALQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVE 477
                + G     P   +  + + ALQ L+QP +E+  P G L VPL+RHQ+IAL+WM +
Sbjct: 236 DPMHRFGGGEDRNPDNDERLVYQAALQVLNQPMTESDLPPGTLSVPLMRHQKIALAWMFQ 295

Query: 478 KETSSVSCAGGILADDQGLGKTISTIALILKER--APIKACSNDRHNELETLNLDDDDD- 537
           KETSS +C GGILADDQGLGKT+STIALILK++  + +K+ S+ +  E E L LD DD+ 
Sbjct: 296 KETSSFNCPGGILADDQGLGKTVSTIALILKQKIVSQLKSESSCK-QETEALVLDADDES 355

Query: 538 ----------ILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKG-------------RPA 597
                     + PEL V        +S   N     +++ +A+              RPA
Sbjct: 356 DNAKHESGSHVKPELKVSSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQWKRPA 415

Query: 598 AGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVS 657
           AGTL+VCP SV+RQWA EL  KVS ++ LSVLVYHGS+RTKDP ELA+YDVV+TTY+IV+
Sbjct: 416 AGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVT 475

Query: 658 MEVPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKK-QSKNKKAVDNEMFES 717
            E P + +VDE+E+++++T+    L   FS +KKRK   G+ KK + + +K+ ++   E 
Sbjct: 476 NEAPNKFLVDEDENDEKNTDRYG-LASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSEP 535

Query: 718 VARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFR 777
              PL KV WFR+VLDEAQ+IKN++TQ+AR+C  LRAKRRWCLSGTPIQN IDDLYSYFR
Sbjct: 536 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 595

Query: 778 FLKYDPYAAYNSFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTKG 797
           FL+YDPYA Y SF S IKVPI++N  +GYKKLQA+LR IMLRRTKG
Sbjct: 596 FLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKG 638

[Close]
BLAST of CmoCh03G004970 vs. TAIR10
Match: AT1G11100.2 (AT1G11100.2 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 372.9 bits (956), Expect = 5.1e-103
Identity = 317/881 (35.98%), Postives = 432/881 (49.04%), Query Frame = 1 

Query: 14  QYGSDDFGEDMSIDYETLIHLLSEDLDPLQDKPEDLSPYNASA----------------- 73
           ++G+DD  ED  ID E +  +L E    ++   E +SP  +S                  
Sbjct: 20  EFGADD--EDFMIDIEAIYRILDESPVSMEVSQEIMSPVGSSVVESGEFRNTLMQRSQAT 79

Query: 74  ---------GKPASDS--------SNQENSEL------QNDISHGFMDVTLKNHN----I 133
                    G  AS S        S+ EN  L       +D     +   +   +    I
Sbjct: 80  GWFPYRDLYGLGASQSEIAEPSSFSDPENGRLGLSATCYSDYGGNVVSFPVNCEDGTVSI 139

Query: 134 LDDKGTEALRSSENNSCASVELHLSDAEHSSIEVIPTESAVNQSFDFATDVTDSYSDMPY 193
           LDD   E+  +  + +  +  L+      S I      S ++     ++ + D  S  PY
Sbjct: 140 LDDMRIESKFTPCSPTTMTTYLNNMPGNDSGIGATQNSSLMSHFSPNSSSIVDCASSEPY 199

Query: 194 WMSTVEQPFLVSSQYFLPGDYDSSVF-----------------SGNGGMAINMMMHEGEF 253
              T++ P    S   +PG Y    F                   +G   +    H G F
Sbjct: 200 GHHTMDAPLSEVSPNLVPG-YAFQFFPKKEELLNDLKNEFIHCQSDGASRMVFDRHVG-F 259

Query: 254 PSNSLSSSTTMNLYAQGATDHK-----SVSRQSVSKDLNLDGYPNVKGWNQ--NCEGGNF 313
            + +   ++  ++ ++     K     SVS   V    + DG+   K   Q  NC     
Sbjct: 260 DNGTSERNSGPDVSSERELSLKCEIIPSVSPVCVKPYNSSDGHQVEKELEQPDNCS---- 319

Query: 314 ISSFDGNYSFHADELRIAQTSMELPMSTELNSS-------CKELVNQVKNETMD-SLVES 373
            SSF  N + H       +   EL +   + SS       C + V+ V   T+  S V +
Sbjct: 320 -SSFQENRAVHM------KVKPELALENTVYSSIPGNYSRCSD-VHTVGGTTLPWSGVSN 379

Query: 374 CSGPWQSMM-EENMFFPSGRVFHSEDMV------------CGTSSRPSIGGSLSNQPLAF 433
           C+  +Q+ + +E  F P    F  +D+             C  +       +   + L +
Sbjct: 380 CAISYQTDVGKEYPFIPPQTAFPGQDIDGRSFYSCFDSDDCFQNVTDPDPETSRTESLDY 439

Query: 434 IKDDRDHRLTPCKSDIDYPLVSPES-THSNLSDKT--QVEDDPDICIIE---DLSHP--- 493
           +  D DH          + L S  S T  +LS K   + EDD +I  IE   +  +P   
Sbjct: 440 LVGDEDHEYIKRTC---FNLSSFSSGTVESLSSKRIPEREDDSEIHKIESYGEFVNPHQY 499

Query: 494 APLNRSLVVGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMDILKVALQDLSQPKSETSP 553
            P+ R +        SQ+ +  GG       G+M   A         LQDLSQ  SE SP
Sbjct: 500 LPVQRPVFSSEHSTGSQTLNNCGGLKFESNKGNMNFHAD--------LQDLSQHSSEASP 559

Query: 554 PDGALDVPLLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERA-PIK 613
           PDG L V LLRHQRIALSWM +KETS   C GGILADDQGLGKT+STIALIL ER+ P  
Sbjct: 560 PDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYL 619

Query: 614 ACSNDRHNELETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGT 673
            C  D  N                     Q  + QV  ++N  + +++L + +GRPAAGT
Sbjct: 620 PCEEDSKN-----------------GGCNQSDHSQVVFNENKVV-EDSLCKMRGRPAAGT 679

Query: 674 LVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEV 733
           L+VCPTS++RQWADEL  KV+ +A+LSVLVYHG SRTKDP ELAKYDVV+TTYS+VS+EV
Sbjct: 680 LIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVVITTYSLVSVEV 739

Query: 734 PKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARP 793
           PKQ   D  ++EK    +  +  + F  +KK  +   S KK +K +K +D E  E ++ P
Sbjct: 740 PKQPR-DRADEEKGGIHDGGVESVGFGSNKK--DLPNSQKKGTKKRKHMDCEPVEFLSGP 799

Query: 794 LAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKY 796
           LA+V WFRVVLDEAQSIKN+KTQ + AC GL AKRRWCLSGTPIQN+I DLYSYFRFLKY
Sbjct: 800 LAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKY 852

[Close]
BLAST of CmoCh03G004970 vs. TAIR10
Match: AT3G16600.1 (AT3G16600.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-60
Identity = 120/229 (52.40%), Postives = 154/229 (67.25%), Query Frame = 1 

Query: 567 KGRPAAGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTT 626
           KG+ + GTL+VCP SV++QWA E+  KVS +  LSVLV+HGS RTKDP E+A YDVV+TT
Sbjct: 110 KGQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTT 169

Query: 627 YSIVSMEVPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNE 686
           Y+IV+ EVP+  +++                 ++   + R++  GS              
Sbjct: 170 YAIVTNEVPQNPMLN-----------------RYDSMRGRESLDGSS------------- 229

Query: 687 MFESVARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLY 746
           + +     L +VRW RVVLDEA +IKNH+T +A+AC+ LRAKRRWCL+GTPI+N +DDLY
Sbjct: 230 LIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLY 289

Query: 747 SYFRFLKYDPYAAYNSFCSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 796
           SYFRFL+Y PYA  NSF   IK PI+K P  GYKKLQAILR IMLRRTK
Sbjct: 290 SYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHGYKKLQAILRGIMLRRTK 308

[Close]
BLAST of CmoCh03G004970 vs. NCBI nr
Match: gi|449434350|ref|XP_004134959.1| (PREDICTED: DNA repair protein RAD16 [Cucumis sativus])

HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 653/813 (80.32%), Postives = 697/813 (85.73%), Query Frame = 1 

Query: 1   MLMAADEASNLPLQYGSDDFGEDMSIDYETLIHLLSEDLDPLQDKPEDLSPYNASAGKPA 60
           +++ ADEASN PLQY  DDF EDMS++YE ++HLLSEDLDPLQ K EDLSP NAS G+PA
Sbjct: 50  IILMADEASNFPLQYADDDFDEDMSMEYEKILHLLSEDLDPLQIKTEDLSPNNASTGQPA 109

Query: 61  SDSSNQENSELQNDISHGFMDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSS 120
            DSSNQEN +LQNDISHGFMDVTLKNH+ LD KGTE LRSSENNSCASVEL   DAEHSS
Sbjct: 110 FDSSNQENFQLQNDISHGFMDVTLKNHDSLDGKGTETLRSSENNSCASVELPSFDAEHSS 169

Query: 121 IEVIPTESAVNQSFDFATDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGG 180
            EV PTES VN SFDF TDVT+SYS MPYWMSTVEQPFLVSSQY  PGDYDS + SGNG 
Sbjct: 170 KEVFPTESTVNPSFDFVTDVTNSYSTMPYWMSTVEQPFLVSSQYLFPGDYDSPLVSGNGD 229

Query: 181 MAINMMMHEGEFPSNSLSSSTTMNLYAQGATDHKSVSRQSVSKDLNLDGYPNVKGWNQNC 240
           M +NMM H+ EFPSNSL SSTTM+LYAQGATDHKSVSR+SVSKDL LD Y NVK W+QNC
Sbjct: 230 MTVNMM-HDVEFPSNSLCSSTTMDLYAQGATDHKSVSRESVSKDLILDRYSNVKRWDQNC 289

Query: 241 EGGNFISSFDGNYSFHADELRIAQTSMELPMSTELNSSCKELVNQVKNETMDSLVESCSG 300
           E GNFISSFDG Y FH D L I Q SM +PMSTELNSSCKELV+Q+KNETMDSLVESCSG
Sbjct: 290 ESGNFISSFDGKYPFHVDNLHIGQASMGIPMSTELNSSCKELVSQMKNETMDSLVESCSG 349

Query: 301 PWQSMMEENMFFPSGRVFH------------SED------MVCGTSSRPSIGGSLSNQPL 360
           PWQSMMEEN+FF S RVF             S D       +    S      +LSNQPL
Sbjct: 350 PWQSMMEENLFFQSQRVFRSEDMVCGTSGRLSNDGRYQNLYITDQYSPNGHSSNLSNQPL 409

Query: 361 AFIKDDRDHRLTPCKSDIDYPLVSPESTHSNLSDKTQVEDDPDICIIEDLSHPAPLNRSL 420
            FIKDDRDH+L+  KSDID+P VSPESTHSNLSD+  VEDDPDICIIED+SHPAP NRSL
Sbjct: 410 VFIKDDRDHKLSVRKSDIDHPQVSPESTHSNLSDRAHVEDDPDICIIEDMSHPAPSNRSL 469

Query: 421 VVGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMDILKVALQDLSQPKSETSPPDGALDV 480
           +VG SV ASQS SIV G S Y+G+GS+R KAKD+DILKVALQDLSQPKSETSPPDGALDV
Sbjct: 470 MVGKSV-ASQSFSIVSGSSTYMGIGSLRQKAKDIDILKVALQDLSQPKSETSPPDGALDV 529

Query: 481 PLLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERAPIKACSNDRHN 540
           PLLRHQRIALSWMV+KETSSV CAGGILADDQGLGKTISTIALILKERAPI+AC   +H 
Sbjct: 530 PLLRHQRIALSWMVQKETSSVPCAGGILADDQGLGKTISTIALILKERAPIRACPTVKHE 589

Query: 541 ELETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTSV 600
           ELETLNLD+DDDI PE D PKQEF HQVS SK+LT+ KN  VQAKGRPAAGTLVVCPTSV
Sbjct: 590 ELETLNLDEDDDIHPEHDGPKQEFSHQVSPSKDLTLSKNTSVQAKGRPAAGTLVVCPTSV 649

Query: 601 LRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDE 660
           LRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQS+VDE
Sbjct: 650 LRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSVVDE 709

Query: 661 EEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWFR 720
           E+DEK +TEEQ ILP   S SKKRKNFSGSDKK SKNKK VDNE+FESVARPLAKVRWFR
Sbjct: 710 EDDEKHNTEEQAILPSHLSSSKKRKNFSGSDKKHSKNKKGVDNEVFESVARPLAKVRWFR 769

Query: 721 VVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNS 780
           VVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAY S
Sbjct: 770 VVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYKS 829

Query: 781 FCSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 796
           FCSAIK PINKNP+KGYKKLQAILRTIMLRRTK
Sbjct: 830 FCSAIKFPINKNPAKGYKKLQAILRTIMLRRTK 860

[Close]
BLAST of CmoCh03G004970 vs. NCBI nr
Match: gi|659078753|ref|XP_008439888.1| (PREDICTED: DNA repair protein RAD16-like [Cucumis melo])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 652/812 (80.30%), Postives = 695/812 (85.59%), Query Frame = 1 

Query: 2   LMAADEASNLPLQYGSDDFGEDMSIDYETLIHLLSEDLDPLQDKPEDLSPYNASAGKPAS 61
           ++ A EASN PLQY  DDF EDMS++YE L+HLLSEDLDPLQ K EDLSP NAS G+PA 
Sbjct: 1   MLMAGEASNFPLQYADDDFDEDMSMEYEKLLHLLSEDLDPLQIKTEDLSPNNASTGQPAF 60

Query: 62  DSSNQENSELQNDISHGFMDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSSI 121
           DSSNQEN +LQNDISHGFMDVTLKNH+ LD KGTE LRSSENNSCASVEL   DAEHSS 
Sbjct: 61  DSSNQENFQLQNDISHGFMDVTLKNHDSLDGKGTETLRSSENNSCASVELPSFDAEHSSK 120

Query: 122 EVIPTESAVNQSFDFATDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGGM 181
           EV PTES VN SFDFATDVTDSYS MPYWMSTVEQPFLVSSQY  PGDYDS + SGNG M
Sbjct: 121 EVFPTESTVNASFDFATDVTDSYSTMPYWMSTVEQPFLVSSQYLFPGDYDSPLVSGNGDM 180

Query: 182 AINMMMHEGEFPSNSLSSSTTMNLYAQGATDHKSVSRQSVSKDLNLDGYPNVKGWNQNCE 241
            +N M HE EFPSNSL SSTTM+LYAQGATDHKS+SR+SVSKDL LDGY NVKGW+QN +
Sbjct: 181 TVNRM-HEVEFPSNSLCSSTTMDLYAQGATDHKSLSRESVSKDLILDGYSNVKGWDQNRK 240

Query: 242 GGNFISSFDGNYSFHADELRIAQTSMELPMSTELNSSCKELVNQVKNETMDSLVESCSGP 301
            GNFISSFDG Y FHA+ L I +TSM  PMSTELNSSCKELV+Q+KNETMDSLVESCSGP
Sbjct: 241 SGNFISSFDGKYPFHANNLHIGRTSMGFPMSTELNSSCKELVSQIKNETMDSLVESCSGP 300

Query: 302 WQSMMEENMFFPSGRVFH------------SED------MVCGTSSRPSIGGSLSNQPLA 361
           WQSMMEEN+FFPS RVF             S D       +    S      +LSNQPL 
Sbjct: 301 WQSMMEENLFFPSQRVFRSEDMVCGTSGRPSSDGRYQNLYITDQYSPNGHSSNLSNQPLV 360

Query: 362 FIKDDRDHRLTPCKSDIDYPLVSPESTHSNLSDKTQVEDDPDICIIEDLSHPAPLNRSLV 421
           FIKDDRDH+L+  KSDID+P VSPESTHSNLSD+  VEDDPDICIIED+SHPAP NRSLV
Sbjct: 361 FIKDDRDHKLSVRKSDIDHPQVSPESTHSNLSDRAHVEDDPDICIIEDMSHPAPSNRSLV 420

Query: 422 VGNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMDILKVALQDLSQPKSETSPPDGALDVP 481
           VG SV ASQS SIV G S Y G+GS+R KAKD+DILKVALQDLSQPKSETSPPDGALDVP
Sbjct: 421 VGKSV-ASQSFSIVSGSSTYTGIGSLRNKAKDIDILKVALQDLSQPKSETSPPDGALDVP 480

Query: 482 LLRHQRIALSWMVEKETSSVSCAGGILADDQGLGKTISTIALILKERAPIKACSNDRHNE 541
           LLRHQRIALSWMV+KETSSV CAGGILADDQGLGKTISTIALILKERAPI+AC   ++ E
Sbjct: 481 LLRHQRIALSWMVQKETSSVPCAGGILADDQGLGKTISTIALILKERAPIRACPTVKNEE 540

Query: 542 LETLNLDDDDDILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTSVL 601
           LETLNLD+DDDI PE D PKQEF HQVS SK+LT+ KN  VQAKGRPAAGTLVVCPTSVL
Sbjct: 541 LETLNLDEDDDIHPEHDGPKQEFSHQVSPSKDLTLSKNTSVQAKGRPAAGTLVVCPTSVL 600

Query: 602 RQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDEE 661
           RQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQS+VDEE
Sbjct: 601 RQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSVVDEE 660

Query: 662 EDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWFRV 721
           +DEK++ EEQ ILP   S SKKRKN SGSDKK SKNKK VDNE+FESVARPLAKVRWFRV
Sbjct: 661 DDEKQNAEEQAILPSHLSSSKKRKNLSGSDKKHSKNKKGVDNEVFESVARPLAKVRWFRV 720

Query: 722 VLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNSF 781
           VLDEAQSIKNHKTQVARAC GLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAY SF
Sbjct: 721 VLDEAQSIKNHKTQVARACCGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYKSF 780

Query: 782 CSAIKVPINKNPSKGYKKLQAILRTIMLRRTK 796
           CSAIK PINKNP+KGYKKLQAILRTIMLRRTK
Sbjct: 781 CSAIKFPINKNPTKGYKKLQAILRTIMLRRTK 810

[Close]
BLAST of CmoCh03G004970 vs. NCBI nr
Match: gi|1009109218|ref|XP_015888898.1| (PREDICTED: uncharacterized protein LOC107423781, partial [Ziziphus jujuba])

HSP 1 Score: 583.2 bits (1502), Expect = 7.0e-163
Identity = 314/505 (62.18%), Postives = 371/505 (73.47%), Query Frame = 1 

Query: 307 EENMFFPSGRVFHSEDMVCGTSSRPSIGGSLSNQPLAFIKDDRDHRLTPCKSDID----- 366
           ++++   S + +HS D + G+ +     G  +     +          PC   +D     
Sbjct: 465 KDDIIVASNKAYHSRDNINGSVASTIDNGHFNLNAEVYF---------PCPQPLDSNENQ 524

Query: 367 -------YPLVSPESTHSNLSDKTQVEDDPDICIIEDLSHPAPLNRSLVVGNSVIASQSC 426
                     VSPESTHSN S+K+ VEDD D+CIIE +SHPAP NR   + N+++ SQ C
Sbjct: 525 PKCLGSHLSKVSPESTHSNFSEKSFVEDDSDVCIIEHMSHPAPSNRLPPLKNNLVTSQHC 584

Query: 427 SIVGGFSAYVGLGSMRPKAKDMD-ILKVALQDLSQPKSETSPPDGALDVPLLRHQRIALS 486
           ++      Y+G G MR KA+D   IL+ ALQDLSQPKSE SPPDG L VPLLRHQ+IALS
Sbjct: 585 TLGDN---YMGFGGMRLKARDESLILRQALQDLSQPKSEASPPDGVLTVPLLRHQKIALS 644

Query: 487 WMVEKETSSVSCAGGILADDQGLGKTISTIALILKERAPIKACSNDRHNELETLNLDDDD 546
           WMV+KET++V CAGGILADDQGLGKTISTIALILKER P      D   E+ETLNLD+D+
Sbjct: 645 WMVQKETANVHCAGGILADDQGLGKTISTIALILKERPPSFRPCQDIKCEMETLNLDEDE 704

Query: 547 D--ILPELDVPKQEFYHQVSLSKNLTIGKNNLVQAKGRPAAGTLVVCPTSVLRQWADELH 606
           D  +LP++   KQE   +  +     +   N + + GRPAAGTLVVCPTSVLRQWA+ELH
Sbjct: 705 DEDVLPKISGMKQESDTRQVMPNGTPMKSMNSLPS-GRPAAGTLVVCPTSVLRQWAEELH 764

Query: 607 NKVSSKANLSVLVYHGSSRTKDPCELAKYDVVLTTYSIVSMEVPKQSIVDEEEDEKRHTE 666
           NKVSS ANLSVLVYHGS+RT+DPCELAKYDVVLTTYSIVSMEVPKQ +VD+++++K   E
Sbjct: 765 NKVSSIANLSVLVYHGSNRTRDPCELAKYDVVLTTYSIVSMEVPKQPLVDDDDEDKGEPE 824

Query: 667 EQTILPMQFSLSKKRKNFSGSDKKQSKNKKAVDNEMFESVARPLAKVRWFRVVLDEAQSI 726
             T   M  S SKKRK    SDKK SK KK ++  + ESVARPLAKV WFRVVLDEAQSI
Sbjct: 825 YHTYPTMGLSSSKKRKYPPSSDKKSSKEKKGLNGAVLESVARPLAKVGWFRVVLDEAQSI 884

Query: 727 KNHKTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAAYNSFCSAIKVPI 786
           KNH+TQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKY+PYA Y SFCS+IKVPI
Sbjct: 885 KNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYEPYAIYKSFCSSIKVPI 944

Query: 787 NKNPSKGYKKLQAILRTIMLRRTKG 797
           NKNPSKGYKKLQA+L+TIMLRRTKG
Sbjct: 945 NKNPSKGYKKLQAVLKTIMLRRTKG 956

[Close]
BLAST of CmoCh03G004970 vs. NCBI nr
Match: gi|657959541|ref|XP_008371320.1| (PREDICTED: uncharacterized protein LOC103434741 isoform X2 [Malus domestica])

HSP 1 Score: 578.2 bits (1489), Expect = 2.3e-161
Identity = 373/780 (47.82%), Postives = 468/780 (60.00%), Query Frame = 1 

Query: 80  MDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSSIEVIPTESAVNQSFD--FA 139
           MD+  + +  L    TE L  SENNSC S+E+  +  ++S +   P  +   +S D  + 
Sbjct: 215 MDLNSRTYFNLGQNTTETLGLSENNSCTSMEMSSTLCQNSDVFSDPYTAMCGRSLDNTYF 274

Query: 140 TDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGGMAINMMMHEGEFPSNSL 199
           TD    +S   Y+                        F  N  M  N+    GEFP++S 
Sbjct: 275 TDALMHHSPTRYY------------------------FPSNEEMMPNVKDESGEFPTDSS 334

Query: 200 SSSTTMNLYAQGATDHKSVSRQSVSKDLN----------------------LDGYP--NV 259
            S+T MNL  Q     KSV   S+   LN                       D +P  N 
Sbjct: 335 CSTTKMNLNGQEGITVKSVFEPSMIDVLNGNQWNFGYGNCMSAISGNSSFDADSFPADNK 394

Query: 260 KGWNQNCEGGNFISS---FDGNYSFHADE-------LRIAQTSMELPMSTELNSSCKELV 319
                 C    ++SS    +G  S   DE       +R +   M+  +S +  S+     
Sbjct: 395 ASVEPLCSNQTYMSSKKEMNGLKSEKIDEFVAPSSVMRQSFRGMDEAVSRQSYSADDHFF 454

Query: 320 NQVKNETMDSLVESCSGPWQSMMEENMFFPS-GRVFHSEDMVCGTSSRPSIGGSLSN--- 379
           +  K+        S      S+ ++ +   +  R  HS+D   G+S+ P  G S+++   
Sbjct: 455 D--KDSKQSGFGISTQNLGNSVDDDEVMIAACKRACHSQDFRNGSSTSPVDGQSVNSNAY 514

Query: 380 ----QPLAFIKDD--RDHRLTPCKSDIDYPLVSPESTHSNLSDKTQVEDDPDICIIEDLS 439
               QP    ++    + ++T  KS + +  VSPES HSN SDK+  EDD D+CIIED S
Sbjct: 515 FPGAQPFTSSRNQGYMNDKVTHSKS-MHFSKVSPESIHSNFSDKSPAEDDVDVCIIEDNS 574

Query: 440 HPAPLNRSLVV---------------GNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMD- 499
           HPAP NRS VV               GN+V+ SQ  +  G +S   G+G MR K +D   
Sbjct: 575 HPAPSNRSSVVSNTSYAAPVYQSPALGNTVVNSQQLTPSGHYS---GVGGMRFKTRDEQL 634

Query: 500 ILKVALQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVEKETSSVSCAGGILADDQGLG 559
           IL+ ALQDLSQPKSE  PPDG L VPLLRHQRIALSWMV+KET+S+ C+GGILADDQGLG
Sbjct: 635 ILRAALQDLSQPKSEAIPPDGLLAVPLLRHQRIALSWMVQKETASLHCSGGILADDQGLG 694

Query: 560 KTISTIALILKERAPIKACSNDRHNELETLNLDDDDDILPELDVPKQEF-YHQVSLSKNL 619
           KTISTIALILKER    AC + + ++LETL+LD+DDD+  E+   KQ    H+V  +   
Sbjct: 695 KTISTIALILKERPSSGACQDVKMHKLETLDLDNDDDMPFEIGGKKQHADAHEVISNGTP 754

Query: 620 TIGKNNLVQAKGRPAAGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCE 679
                 L+QAKGRPAAGTLVVCPTSVLRQWA+EL NKV+ KANLSVLVYHG +RT+DP E
Sbjct: 755 NESIKPLIQAKGRPAAGTLVVCPTSVLRQWAEELQNKVTEKANLSVLVYHGCNRTRDPLE 814

Query: 680 LAKYDVVLTTYSIVSMEVPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQ 739
           LAK+DVVLTTYSIVSMEVPKQ +VD++++EK   +E          SKKRK    S  K 
Sbjct: 815 LAKHDVVLTTYSIVSMEVPKQPLVDDDDEEKGKRDEYD----GPHYSKKRKYPQNSANKG 874

Query: 740 SKNKKAVDNEMFESVARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGT 797
           SK KK +++ + +SVARPLAKV WFRVVLDEAQSIKNH+TQVARACWGLRAKRRWCLSGT
Sbjct: 875 SKGKKGLESAVLDSVARPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGT 934

[Close]
BLAST of CmoCh03G004970 vs. NCBI nr
Match: gi|657959539|ref|XP_008371319.1| (PREDICTED: uncharacterized protein LOC103434741 isoform X1 [Malus domestica])

HSP 1 Score: 578.2 bits (1489), Expect = 2.3e-161
Identity = 373/780 (47.82%), Postives = 468/780 (60.00%), Query Frame = 1 

Query: 80  MDVTLKNHNILDDKGTEALRSSENNSCASVELHLSDAEHSSIEVIPTESAVNQSFD--FA 139
           MD+  + +  L    TE L  SENNSC S+E+  +  ++S +   P  +   +S D  + 
Sbjct: 216 MDLNSRTYFNLGQNTTETLGLSENNSCTSMEMSSTLCQNSDVFSDPYTAMCGRSLDNTYF 275

Query: 140 TDVTDSYSDMPYWMSTVEQPFLVSSQYFLPGDYDSSVFSGNGGMAINMMMHEGEFPSNSL 199
           TD    +S   Y+                        F  N  M  N+    GEFP++S 
Sbjct: 276 TDALMHHSPTRYY------------------------FPSNEEMMPNVKDESGEFPTDSS 335

Query: 200 SSSTTMNLYAQGATDHKSVSRQSVSKDLN----------------------LDGYP--NV 259
            S+T MNL  Q     KSV   S+   LN                       D +P  N 
Sbjct: 336 CSTTKMNLNGQEGITVKSVFEPSMIDVLNGNQWNFGYGNCMSAISGNSSFDADSFPADNK 395

Query: 260 KGWNQNCEGGNFISS---FDGNYSFHADE-------LRIAQTSMELPMSTELNSSCKELV 319
                 C    ++SS    +G  S   DE       +R +   M+  +S +  S+     
Sbjct: 396 ASVEPLCSNQTYMSSKKEMNGLKSEKIDEFVAPSSVMRQSFRGMDEAVSRQSYSADDHFF 455

Query: 320 NQVKNETMDSLVESCSGPWQSMMEENMFFPS-GRVFHSEDMVCGTSSRPSIGGSLSN--- 379
           +  K+        S      S+ ++ +   +  R  HS+D   G+S+ P  G S+++   
Sbjct: 456 D--KDSKQSGFGISTQNLGNSVDDDEVMIAACKRACHSQDFRNGSSTSPVDGQSVNSNAY 515

Query: 380 ----QPLAFIKDD--RDHRLTPCKSDIDYPLVSPESTHSNLSDKTQVEDDPDICIIEDLS 439
               QP    ++    + ++T  KS + +  VSPES HSN SDK+  EDD D+CIIED S
Sbjct: 516 FPGAQPFTSSRNQGYMNDKVTHSKS-MHFSKVSPESIHSNFSDKSPAEDDVDVCIIEDNS 575

Query: 440 HPAPLNRSLVV---------------GNSVIASQSCSIVGGFSAYVGLGSMRPKAKDMD- 499
           HPAP NRS VV               GN+V+ SQ  +  G +S   G+G MR K +D   
Sbjct: 576 HPAPSNRSSVVSNTSYAAPVYQSPALGNTVVNSQQLTPSGHYS---GVGGMRFKTRDEQL 635

Query: 500 ILKVALQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVEKETSSVSCAGGILADDQGLG 559
           IL+ ALQDLSQPKSE  PPDG L VPLLRHQRIALSWMV+KET+S+ C+GGILADDQGLG
Sbjct: 636 ILRAALQDLSQPKSEAIPPDGLLAVPLLRHQRIALSWMVQKETASLHCSGGILADDQGLG 695

Query: 560 KTISTIALILKERAPIKACSNDRHNELETLNLDDDDDILPELDVPKQEF-YHQVSLSKNL 619
           KTISTIALILKER    AC + + ++LETL+LD+DDD+  E+   KQ    H+V  +   
Sbjct: 696 KTISTIALILKERPSSGACQDVKMHKLETLDLDNDDDMPFEIGGKKQHADAHEVISNGTP 755

Query: 620 TIGKNNLVQAKGRPAAGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCE 679
                 L+QAKGRPAAGTLVVCPTSVLRQWA+EL NKV+ KANLSVLVYHG +RT+DP E
Sbjct: 756 NESIKPLIQAKGRPAAGTLVVCPTSVLRQWAEELQNKVTEKANLSVLVYHGCNRTRDPLE 815

Query: 680 LAKYDVVLTTYSIVSMEVPKQSIVDEEEDEKRHTEEQTILPMQFSLSKKRKNFSGSDKKQ 739
           LAK+DVVLTTYSIVSMEVPKQ +VD++++EK   +E          SKKRK    S  K 
Sbjct: 816 LAKHDVVLTTYSIVSMEVPKQPLVDDDDEEKGKRDEYD----GPHYSKKRKYPQNSANKG 875

Query: 740 SKNKKAVDNEMFESVARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGT 797
           SK KK +++ + +SVARPLAKV WFRVVLDEAQSIKNH+TQVARACWGLRAKRRWCLSGT
Sbjct: 876 SKGKKGLESAVLDSVARPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGT 935

The following BLAST results are available for this feature:
BLAST of CmoCh03G004970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHR28_ARATH1.1e-11257.58Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana GN=CHR28 PE=1 S... [more]
CHR27_ARATH7.4e-10448.28Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana GN=CHR27 PE=1 S... [more]
TTF2_MOUSE7.5e-3227.90Transcription termination factor 2 OS=Mus musculus GN=Ttf2 PE=1 SV=2[more]
SM3L2_ARATH6.2e-2631.31Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati... [more]
YBMA_SCHPO8.1e-2634.08Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe (st... [more]
BLAST of CmoCh03G004970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN95_CUCSA0.0e+0080.32Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517140 PE=4 SV=1[more]
F6GZ87_VITVI2.8e-15864.90Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00700 PE=4 SV=... [more]
A0A0R0G663_SOYBN7.6e-15646.68Uncharacterized protein OS=Glycine max GN=GLYMA_15G070100 PE=4 SV=1[more]
K7MA24_SOYBN7.6e-15646.68Uncharacterized protein OS=Glycine max GN=GLYMA_15G070100 PE=4 SV=1[more]
K7MA23_SOYBN7.6e-15646.68Uncharacterized protein OS=Glycine max GN=GLYMA_15G070100 PE=4 SV=1[more]
BLAST of CmoCh03G004970 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61140.12.6e-13157.65 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT1G50410.16.4e-11457.58 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT3G20010.14.2e-10548.28 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT1G11100.25.1e-10335.98 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT3G16600.11.4e-6052.40 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
BLAST of CmoCh03G004970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434350|ref|XP_004134959.1|0.0e+0080.32PREDICTED: DNA repair protein RAD16 [Cucumis sativus][more]
gi|659078753|ref|XP_008439888.1|0.0e+0080.30PREDICTED: DNA repair protein RAD16-like [Cucumis melo][more]
gi|1009109218|ref|XP_015888898.1|7.0e-16362.18PREDICTED: uncharacterized protein LOC107423781, partial [Ziziphus jujuba][more]
gi|657959541|ref|XP_008371320.1|2.3e-16147.82PREDICTED: uncharacterized protein LOC103434741 isoform X2 [Malus domestica][more]
gi|657959539|ref|XP_008371319.1|2.3e-16147.82PREDICTED: uncharacterized protein LOC103434741 isoform X1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G004970.1CmoCh03G004970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 484..796
score: 1.7
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 460..770
score: 5.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 479..755
score: 12
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 566..631
score: 5.4E-25coord: 458..510
score: 5.4E-25coord: 691..753
score: 5.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 449..519
score: 1.36E-45coord: 692..793
score: 1.36E-45coord: 571..633
score: 1.36
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 1..30
score: 4.0E-176coord: 692..796
score: 4.0E-176coord: 442..633
score: 4.0E
NoneNo IPR availablePANTHERPTHR10799:SF705SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..30
score: 4.0E-176coord: 692..796
score: 4.0E-176coord: 442..633
score: 4.0E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G004970Cucumber (Chinese Long) v3cmocucB0793
CmoCh03G004970Watermelon (97103) v2cmowmbB642
CmoCh03G004970Wax gourdcmowgoB0781
CmoCh03G004970Cucurbita moschata (Rifu)cmocmoB182
CmoCh03G004970Cucurbita moschata (Rifu)cmocmoB335
CmoCh03G004970Cucurbita moschata (Rifu)cmocmoB362
CmoCh03G004970Cucurbita moschata (Rifu)cmocmoB428
CmoCh03G004970Cucurbita moschata (Rifu)cmocmoB455
CmoCh03G004970Cucumber (Gy14) v1cgycmoB0042
CmoCh03G004970Cucurbita maxima (Rimu)cmacmoB235
CmoCh03G004970Cucurbita maxima (Rimu)cmacmoB653
CmoCh03G004970Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G004970Wild cucumber (PI 183967)cmocpiB681
CmoCh03G004970Cucumber (Chinese Long) v2cmocuB637
CmoCh03G004970Cucumber (Chinese Long) v2cmocuB670
CmoCh03G004970Melon (DHL92) v3.5.1cmomeB581
CmoCh03G004970Melon (DHL92) v3.5.1cmomeB600
CmoCh03G004970Watermelon (Charleston Gray)cmowcgB575
CmoCh03G004970Watermelon (97103) v1cmowmB623
CmoCh03G004970Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G004970Cucurbita pepo (Zucchini)cmocpeB631
CmoCh03G004970Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G004970Bottle gourd (USVL1VR-Ls)cmolsiB582
CmoCh03G004970Cucumber (Gy14) v2cgybcmoB811
CmoCh03G004970Melon (DHL92) v3.6.1cmomedB686
CmoCh03G004970Silver-seed gourdcarcmoB0045
CmoCh03G004970Silver-seed gourdcarcmoB0886
CmoCh03G004970Silver-seed gourdcarcmoB1246