CmoCh03G004960 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G004960
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionzinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding
LocationCmo_Chr03 : 5264842 .. 5269364 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATAACTTGATGACGTTCTTGAATCATGGTAAGATGATGAGCTGGTAGTCTTGTTGGTCGCTTTTATGAGTTTGCTTTGGAGTGGTCTGAGGAATTGGGCTTTATGGATATCAGATCTGCCAGCTTTATTAGAAGTTCAATTAAATTGAGATTAGCTACGAGGCTTAACACTTACTATCACGTGAAAGCACCAGGATAATTTCTTCTGACGACAATATGCCATTTTTTTAACTTTGTTGGACAATTGTATTATCATTTTAATGATGTAAATAATGTACCTCATTTCCCTCGTTTTCTTGAGTTTCTGGTAATTGATTCCTCGTGACCTATTTTATTTAACTTCACTTGATTCTAGTTGCTTACTTTGTAAGATGTAACATTCAGATGATCTTGTCGGGCAATTTCATTAGTTTTTACTTGTACCATGTGGTGGATTCTGTTTGAACTCCGCATTTTACTTTTCTTTGCCATTCCATTGCACACACTTTTTGATATTTTATGAACTTACCAATTTGACTAGGATCATTCTACGGCTCTTCTTGTGTAGGCACACTTCTTGATGGGCAACCCATTGTTACATTGCCACCTAAACACGTGGAACTGAAAAAGGTGGATTTTACTGAGGAAGAACGTGATTTCTACTCTAAATTGGAGGCTGACTCAAGAGCTCAGTATGAAGTATGTTTTTTTCAAAAGGAAATTGTGTGTAGTTCGTTTTGTTGCCTTGTGTATGGAATTTCAGTTACAATATCTAATTACCTCCTGCCTCTTTCTATTATTACTTACTAAGAATCTTCTCCAGGAATATGCAGCAGCTGGAACTGTTAAACAAAATTATGTTAACATCTTACTGATGCTTTTGCGCCTTCGACAAGCTTGTGATCACCCTCTTCTTGTTAAACCATACGACTCTAAATCTTTATGGAGATCTTCAGTTGATGTGGCCAAGAAGCTTCCTCGGGAAAAACAGATTTTCCTACTGAACTGTCTGGAAGCATCACTGGCTATTTGTGGCATCTGTAATGTATATCTTCTGCTCATTTCTTCTCTTTGATGTGATACTTTTTAGTTCTAGTATATTAGTATGGTTTAGTGTATTTGGGATTTAAATACCACATTTAGTTCCAACTATCTGTTGGCTTATAAGTTATCATGAATTTGTTGACTTTTTGCTTAATATAAAAATTACAAAGCATGAAATTCTGATGCTCTTTTTATCCCTTATAACTGCTGAACATATATTGAGGCATTCTGTACCTTTGACGTTATATGTGAATTTCTCGCCTCAAAAACTGCTGTTTGGGCTCTGCATGATGCTTTCTTGTTATGTCAGAGATGTATGACATGTTTATATCGCAACACTCTGTAAGAAGGAGCTTTTTAGCTTCATTTTGTGACTTCATCATTTCTGATATTTATGCAGTTCCCCATGTTCTCTTTGTTATCCTGCTAATCTTTCATTTATCTGGTAAGAGATAAGCGGTATATTTCTTAAATCAAATTTCTGTGATTATTTCTGTAGGATCCACCTGAAGATGCGGTTGTTTCAGAATGTGGTCACGTTTTCTGCAAGCAATGCATTTTGGAACACCTCTCTGGTGATGATAGCCAGTGCCCTACAGCAGGATGCAAAGTTCGTCTCAATGCATCTTTGTTGTTTTCCAAGTCCTCATTATGCAATTCTCACTCCGATCAGCTTAGTGAGGACAATTCAGTGGTTAGCTCTTCTTCCACGGTTGGTGACTCAGTGGAGCCCTCTTCATCAGTTATGTACGAGTCTTCTAAAATTAAAGCTGCTCTTGAGGTTCTGGTGTCATTGGCTAAACCCAAGGAATACTCTTCAAAAAACAGCCCTTCCCAACTTGCTGTTGTTGGAGCCAGCGAGAAATCAATCGATGCTCCATCCACTGAACCGCAAATGGAAGGTCCCAAGTGTCAAGATTCTACAAACAAAGGCTCTTGCGAATCAATTGGAATAGGTGTAGAAAAAGCAATAGTCTTTTCTCAGTGGACGGGAATGTTAGATTTGCTTGAAGCAGGTCTAAAAAACTCCTCCATTCAGTACAGAAGACTTGATGGTACCATGTCAGTACTTGCTAGAGATAAAGCAGTAAAGGATTTTAACAATGTTCCGGAGGTTTGTCAAACGAACTGGCCCTACACTTGAGTAGTTTTCACATATTTTATAATCGCACATCTGTATGTATGCTGCATGGTCTTTTCCTTTCTTTTCTGTTTATTGATAGAAATACTGCCTGTTATTCTTACCTTCCAACTTGTTTGCATGATAAATATGATTCAGTAATTTCCCTTATAATAGGTGTCAGTTATGATCATGTCTTTGAAAGCTGCTAGCCTTGGTCTAAACATGATCGTTGCCTGCCATGTTCTTCTGTTGGACCTCTGGTGGAATCCTACAACGGAAGATCAAGCGATTGATAGAGCACATCGAATCGGACAAACTCGTCCTGTTACAGTGTTGAGATTAACTGTAAGAGACACAGTCGAGGATCGTATTTTAGCCCTTCAGGTACGTACTGGTCACATGTTTCACTTTCAATTATTGATTTGAGTTCTTGATTGTTCTAGATTGATCAAAATCCAGTTTACTATGCAGATACGCAATCAGTTAAGTGAAGTTTCAAAAACTTTAGTTTTGCCTTACCAAAAGTTAGTTGGGATCTAGGAAAGACAGACACTTTAGTTTGGGTAACATGTTCTTGTTCGTACACATATTCAGTACTAGTTAGCATAATAGACGTGTTAGTTAGTTGTGCAAGGTTATGTTGGTCAGGCATAAATAGATGTAAATAGTAATCTAGGTCAAAAGTAATATATGAGAGAAAAGTACATCCAACTTTTTTTTTTAAGCATGTAAATGTAAATAAATATATAAGAATTTGAATTTCCTTGTATAAATATGATATATATTTAGGAAATTGTATTTTGAAAATTTTAATTATTATGTTCTTTTTTGATCTTTGAAATTTGGGTATCATAATCTATTTAATTCTTACATTTTCATCCCTAAGATCGAGGAAGCATGAGTGTCTGGATCTATTTAGTTCTTAAATTTCAAAATCTTACACTTTCATCCCTATGACCGAGGAAGTGTGGGTCTTAGAATCTATTTAGTTCTTAGATTTCAAAATCTTACATTTTCATCCCTAAGATTGAGGAAGTGGTTCCTTTTAGTACTTCGATCATTAGTCAACCTACAGGAAAGTGACATGCAATAGAATTAGTGAGATTCAACCATTAAAATTGAAAGAACAAGAAAAACTCTCTCTCTCTCTCTCTCCCCCTCTCCTCTCTCTGACCCCTCGCCCATGTTAGCCCCATCCCTTCAGGTCTCACTTTCAGCGAGTAATGTTCAACGGCGGTGAGACCCACGACCTCGCCTTCACTGATTCTGTTCTCCTTCACCACTTACCTTCTCTTCCAACTCTCCTTCTCATGGTTTTCTTTCTCTCTCGCTTTCCAGCCTTGAACAGAAATCATGTAATGATCAATCCTAGTCGGCAACAGAATAGCTACATATATTATTGTTAAACAAGGCCTTGGTTGACATTAGCTATGTTGATCATTTCCCTCCATTTTTGCATGAAAGAATATATAAGGACTTACAATAAGGACTCGACAAAAAACGTATCTTTGCCTCGGTACTAAACTTTTAAACTTCACGTGTCATTGTGTCTGTATATTGCTTCTTAGGTTAGGACACTATATTTCTGTTTGAACTTTTTCCCCAACCTAATTGTACTTCATATTTGCCCACATATTTATGTATGACAACCACATTCTTGGCAATGGTTAGGCACAATGGATTTGTGACAGAATGCGAAAAAATCTTATAATTCTTTTAAAGCGTTCCTGTGTGTTTTTCTCCATGAATTTACACGTCTGTTCCAATCAGGGACGTCGTGTGATCTGAATTTCTGCATCCATTTCTGTTGGTTAATTGATTGTTTATATGCATTCATTTGTTTCATGCAGCAAAAGAAAAGAGAAATGGTTTCATCTGCATTTGGAGAAGACAAAGCAGGCGGTCAACAAACTCGTCTCACAGTAGAAGACCTGGACTACCTTTTTATGATGTGATGATAGATATACTTTCCGATTATTCTTTGGAATTGGCTGCTGATGATTTAGGCTAACATCATAACATCATATGCACATATGATATGAAGTTTTGGGTGGTGGTGAAGGCTGCCTGCATTGGCCCCATTTTTGGAAAGCAAGTTGTCCGACATATTTAGATTAGTCGGGCAACCAGATGATTTGTGAATAGCATTTTGTAGAAATCTTTGATTCCATTTTTGGCCACTCAAATTCTTTTCTCACACACAGTTTGATCCCTCTGTGGACTCTGTTTACACCCCATTCCCGCAGTATATCCCACAGGTTGTAAAAATTAGAAATTTATAGAAAAGATAGAAAATTATATCTGTCAAAACTCTTTTCCTTTCCAAATGTAAAGATATAGATAGTATTTTTTTGCTTTATCATCTCCCCTC

mRNA sequence

ATGGAAAATAACTTGATGACGTTCTTGAATCATGGCACACTTCTTGATGGGCAACCCATTGTTACATTGCCACCTAAACACGTGGAACTGAAAAAGGTGGATTTTACTGAGGAAGAACGTGATTTCTACTCTAAATTGGAGGCTGACTCAAGAGCTCAGTATGAAGAATATGCAGCAGCTGGAACTGTTAAACAAAATTATGTTAACATCTTACTGATGCTTTTGCGCCTTCGACAAGCTTGTGATCACCCTCTTCTTGTTAAACCATACGACTCTAAATCTTTATGGAGATCTTCAGTTGATGTGGCCAAGAAGCTTCCTCGGGAAAAACAGATTTTCCTACTGAACTGTCTGGAAGCATCACTGGCTATTTGTGGCATCTGTAATGATCCACCTGAAGATGCGGTTGTTTCAGAATGTGGTCACGTTTTCTGCAAGCAATGCATTTTGGAACACCTCTCTGGTGATGATAGCCAGTGCCCTACAGCAGGATGCAAAGTTCGTCTCAATGCATCTTTGTTGTTTTCCAAGTCCTCATTATGCAATTCTCACTCCGATCAGCTTAGTGAGGACAATTCAGTGGTTAGCTCTTCTTCCACGGTTGGTGACTCAGTGGAGCCCTCTTCATCAGTTATGTACGAGTCTTCTAAAATTAAAGCTGCTCTTGAGGTTCTGGTGTCATTGGCTAAACCCAAGGAATACTCTTCAAAAAACAGCCCTTCCCAACTTGCTGTTGTTGGAGCCAGCGAGAAATCAATCGATGCTCCATCCACTGAACCGCAAATGGAAGGTCCCAAGTGTCAAGATTCTACAAACAAAGGCTCTTGCGAATCAATTGGAATAGGTGTAGAAAAAGCAATAGTCTTTTCTCAGTGGACGGGAATGTTAGATTTGCTTGAAGCAGGTCTAAAAAACTCCTCCATTCAGTACAGAAGACTTGATGGTACCATGTCAGTACTTGCTAGAGATAAAGCAGTAAAGGATTTTAACAATGTTCCGGAGGTGTCAGTTATGATCATGTCTTTGAAAGCTGCTAGCCTTGGTCTAAACATGATCGTTGCCTGCCATGTTCTTCTGTTGGACCTCTGGTGGAATCCTACAACGGAAGATCAAGCGATTGATAGAGCACATCGAATCGGACAAACTCGTCCTGTTACAGTGTTGAGATTAACTGTAAGAGACACAGTCGAGGATCGTATTTTAGCCCTTCAGCAAAAGAAAAGAGAAATGGTTTCATCTGCATTTGGAGAAGACAAAGCAGGCGGTCAACAAACTCGTCTCACAGTAGAAGACCTGGACTACCTTTTTATGATGTGATGATAGATATACTTTCCGATTATTCTTTGGAATTGGCTGCTGATGATTTAGGCTAACATCATAACATCATATGCACATATGATATGAAGTTTTGGGTGGTGGTGAAGGCTGCCTGCATTGGCCCCATTTTTGGAAAGCAAGTTGTCCGACATATTTAGATTAGTCGGGCAACCAGATGATTTGTGAATAGCATTTTGTAGAAATCTTTGATTCCATTTTTGGCCACTCAAATTCTTTTCTCACACACAGTTTGATCCCTCTGTGGACTCTGTTTACACCCCATTCCCGCAGTATATCCCACAGGTTGTAAAAATTAGAAATTTATAGAAAAGATAGAAAATTATATCTGTCAAAACTCTTTTCCTTTCCAAATGTAAAGATATAGATAGTATTTTTTTGCTTTATCATCTCCCCTC

Coding sequence (CDS)

ATGGAAAATAACTTGATGACGTTCTTGAATCATGGCACACTTCTTGATGGGCAACCCATTGTTACATTGCCACCTAAACACGTGGAACTGAAAAAGGTGGATTTTACTGAGGAAGAACGTGATTTCTACTCTAAATTGGAGGCTGACTCAAGAGCTCAGTATGAAGAATATGCAGCAGCTGGAACTGTTAAACAAAATTATGTTAACATCTTACTGATGCTTTTGCGCCTTCGACAAGCTTGTGATCACCCTCTTCTTGTTAAACCATACGACTCTAAATCTTTATGGAGATCTTCAGTTGATGTGGCCAAGAAGCTTCCTCGGGAAAAACAGATTTTCCTACTGAACTGTCTGGAAGCATCACTGGCTATTTGTGGCATCTGTAATGATCCACCTGAAGATGCGGTTGTTTCAGAATGTGGTCACGTTTTCTGCAAGCAATGCATTTTGGAACACCTCTCTGGTGATGATAGCCAGTGCCCTACAGCAGGATGCAAAGTTCGTCTCAATGCATCTTTGTTGTTTTCCAAGTCCTCATTATGCAATTCTCACTCCGATCAGCTTAGTGAGGACAATTCAGTGGTTAGCTCTTCTTCCACGGTTGGTGACTCAGTGGAGCCCTCTTCATCAGTTATGTACGAGTCTTCTAAAATTAAAGCTGCTCTTGAGGTTCTGGTGTCATTGGCTAAACCCAAGGAATACTCTTCAAAAAACAGCCCTTCCCAACTTGCTGTTGTTGGAGCCAGCGAGAAATCAATCGATGCTCCATCCACTGAACCGCAAATGGAAGGTCCCAAGTGTCAAGATTCTACAAACAAAGGCTCTTGCGAATCAATTGGAATAGGTGTAGAAAAAGCAATAGTCTTTTCTCAGTGGACGGGAATGTTAGATTTGCTTGAAGCAGGTCTAAAAAACTCCTCCATTCAGTACAGAAGACTTGATGGTACCATGTCAGTACTTGCTAGAGATAAAGCAGTAAAGGATTTTAACAATGTTCCGGAGGTGTCAGTTATGATCATGTCTTTGAAAGCTGCTAGCCTTGGTCTAAACATGATCGTTGCCTGCCATGTTCTTCTGTTGGACCTCTGGTGGAATCCTACAACGGAAGATCAAGCGATTGATAGAGCACATCGAATCGGACAAACTCGTCCTGTTACAGTGTTGAGATTAACTGTAAGAGACACAGTCGAGGATCGTATTTTAGCCCTTCAGCAAAAGAAAAGAGAAATGGTTTCATCTGCATTTGGAGAAGACAAAGCAGGCGGTCAACAAACTCGTCTCACAGTAGAAGACCTGGACTACCTTTTTATGATGTGA
Homology
[Close]
BLAST of CmoCh03G004960 vs. Swiss-Prot
Match: CHR28_ARATH (Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana GN=CHR28 PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.5e-124
Identity = 242/431 (56.15%), Postives = 313/431 (72.62%), Query Frame = 1 

Query: 12  GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
           GTLLDGQPI+ LPPK + L +VDF+ EER FY KLE+DSR+Q++ YAAAGT+ QNY NIL
Sbjct: 567 GTLLDGQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANIL 626

Query: 72  LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
           LMLLRLRQACDHP LVK Y+S S+ + S +  KKLP+E  + LL+ LE+S  IC +C+DP
Sbjct: 627 LMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 686

Query: 132 PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQL--- 191
           PED VV+ CGH+FC QC+ ++++GD+  CP   C+ +L   ++FSKS+L +  +D L   
Sbjct: 687 PEDPVVTLCGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSKSTLRSCVADDLGCS 746

Query: 192 -SEDNSVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVG 251
            SEDNS   S    G+         + SSKIKA L++L SL+      + NS     +  
Sbjct: 747 SSEDNSHDKSVFQNGE---------FSSSKIKAVLDILQSLS---NQGTSNSTQNGQMAS 806

Query: 252 ASEKSIDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSS 311
           +S++  D    +   +     + T+  S  S G G  K I+FSQWTGMLDL+E  L  +S
Sbjct: 807 SSQQPND--DDDDDDDDVTIVEKTSLKSTPSNG-GPIKTIIFSQWTGMLDLVELSLIENS 866

Query: 312 IQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPT 371
           I++RRLDGTMS++ARD+AVK+F+N P+V VMIMSLKA +LGLNMI ACHV+LLDLWWNPT
Sbjct: 867 IEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPT 926

Query: 372 TEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRL 431
           TEDQAIDRAHRIGQTRPVTV R+T+++TVEDRILALQ++KR+MV+SAFGED  G   TRL
Sbjct: 927 TEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQEEKRKMVASAFGEDHGGSSATRL 981

Query: 432 TVEDLDYLFMM 439
           TV+DL YLFM+
Sbjct: 987 TVDDLKYLFMV 981

[Close]
BLAST of CmoCh03G004960 vs. Swiss-Prot
Match: CHR27_ARATH (Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana GN=CHR27 PE=1 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.5e-119
Identity = 233/427 (54.57%), Postives = 296/427 (69.32%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            GTLLDG+PI+ LPPK V L +VDF+  ER FY KLEADSR+Q++ YA AGT+ QNY NIL
Sbjct: 638  GTLLDGKPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANIL 697

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            L+LLRLRQACDHP LVK Y+S  + + S    ++LPRE +  L+N LE+S AIC  CN+P
Sbjct: 698  LLLLRLRQACDHPQLVKRYNSDPVGKVSEAAVRRLPREARSRLINRLESSSAICYECNEP 757

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PE  VV+ CGH+FC +C+LE+++GD++ CP   CK +L   ++FS+SSL N  SD     
Sbjct: 758  PEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQQLARDVVFSESSLRNCTSD----- 817

Query: 192  NSVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASEK 251
            +S  SSS   G          + SSKIKA L++L SL++P   +S     Q+        
Sbjct: 818  DSGCSSSHDNGLDRSVFQKRDFCSSKIKAVLDILQSLSQPDSPNSAQH-GQMPSSSRPYD 877

Query: 252  SIDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSSIQYR 311
              D    EP            +    S   G  K I+FSQWTGMLDL+E  +  S I++R
Sbjct: 878  DDDVTIVEPM-----------RLHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFR 937

Query: 312  RLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQ 371
            RLDGTMS+ ARD+AVK+F+  P+V VM+MSLKA +LGLNM+ ACHV+LLDLWWNPTTEDQ
Sbjct: 938  RLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ 997

Query: 372  AIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRLTVED 431
            AIDRAHRIGQTRPVTV R+T++DTVEDRIL LQ++KR MV+SAFGE+  G   TRLTV+D
Sbjct: 998  AIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQEEKRTMVASAFGEEHGGSSATRLTVDD 1047

Query: 432  LDYLFMM 439
            L YLFM+
Sbjct: 1058 LKYLFMV 1047

[Close]
BLAST of CmoCh03G004960 vs. Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.02 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.2e-48
Identity = 131/431 (30.39%), Postives = 227/431 (52.67%), Query Frame = 1 

Query: 13   TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 72
            T +DG+PI+TLPPK     + D +  E +FY+ L++ ++ Q  +Y   GT+  +Y ++L+
Sbjct: 632  TKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLV 691

Query: 73   MLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIF--LLNCLEASLAI-CGICN 132
            +LLRLRQAC HP L+   ++      S   AK      QI+   +N L+    + C +C 
Sbjct: 692  LLLRLRQACCHPWLIVAREAAVDDNDSFQ-AKNRAIYNQIYPEAVNRLKLIETLQCSLCM 751

Query: 133  DP-PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSD-Q 192
            D   E  ++  CGH  C++C+   ++  +          + +   +  K S+C  + D +
Sbjct: 752  DVVAELLIIVPCGHFLCRECLTHVITSSEDMAK------QTSNENISPKCSVCEEYIDTE 811

Query: 193  LSEDNSVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVG 252
                 ++    S +   V+  + +  E+          +S   PK+YS+     Q+ +  
Sbjct: 812  RLLSYALFRRYSGMAPIVDADNKLRTEN----------ISELLPKQYSNILENRQMGMKI 871

Query: 253  ASEKSIDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSS 312
             ++      ST+ +      ++   K          +K ++FSQ+   L+L     +   
Sbjct: 872  FTDPKHWTTSTKIEKALNAVKEIIKKQP-------TDKILIFSQFVSFLELFTVPFRQEG 931

Query: 313  IQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPT 372
            I+Y    G +S   R++A+ +F   P V V+++SLKA ++GLN+  A HV++LD +WNP 
Sbjct: 932  IKYLMYTGGLSTAERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPY 991

Query: 373  TEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRL 432
             E+QA+DRAHRIGQ +PV +LR+   +T+E+R+LALQ +KRE++ SA GE K   + +RL
Sbjct: 992  IEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLALQDRKRELIDSALGE-KGLREISRL 1037

Query: 433  TVEDLDYLFMM 439
              ++L +LF M
Sbjct: 1052 NTKELSFLFGM 1037

[Close]
BLAST of CmoCh03G004960 vs. Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.12 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.5e-39
Identity = 135/432 (31.25%), Postives = 212/432 (49.07%), Query Frame = 1 

Query: 13  TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 72
           T ++  PIV LPPK +    V+   EER  Y++  + +++  + Y         Y  +L+
Sbjct: 492 TRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGFLLV 551

Query: 73  MLLRLRQACDHPLLVKP--YDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICND 132
            LLRLRQ C HP LVK    D+    R S +V         + +          C +C D
Sbjct: 552 SLLRLRQFCCHPWLVKSSSLDNSFRIRDSENVRNACKSLDPLTIERIATLQDFNCSVCLD 611

Query: 133 PPEDAV-VSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLS 192
           P    V +  CGH  C++C+   +        T         S + +K  +C  +  Q S
Sbjct: 612 PCLAPVFIIPCGHFTCQECMSMLVGQKYGSSST---------STIIAKCPMCRGNIVQDS 671

Query: 193 -EDNSVVSSSSTVGDSVEPSSSVMYES----SKIKAALEVLVSLAKPKEYSSKNSPSQLA 252
             D +++ +     +S++     M +S      IK   E  +     K++  + S  +  
Sbjct: 672 LVDATILQAIHGPLNSLKQLELDMNQSFSEQESIKLRWENRIDQMFTKKFGKRASEWK-- 731

Query: 253 VVGASEKSIDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLK 312
              +S K   A  T   + G K                 EK +V+SQ++  L L+   LK
Sbjct: 732 ---SSSKLNQARQTILDIIGSKRN---------------EKILVYSQFSQYLCLVSHMLK 791

Query: 313 NSSIQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWW 372
             +I++ R DGTMS   R K++  FNN  +V VM++SLKA S+GLN+ +A HV+L + ++
Sbjct: 792 LENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFY 851

Query: 373 NPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQ 432
           NP+ EDQAIDR HR+GQ +PVTV R   +DT+E+RI+++Q+KKR++V  A  +       
Sbjct: 852 NPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQRKKRQLVKEAL-DSNENNPL 893

Query: 433 TRLTVEDLDYLF 437
           +RL  E+L YLF
Sbjct: 912 SRLDKEELLYLF 893

[Close]
BLAST of CmoCh03G004960 vs. Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.8e-31
Identity = 67/153 (43.79%), Postives = 99/153 (64.71%), Query Frame = 1 

Query: 284  EKAIVFSQWTGMLDLLEAGLKNSSIQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLK 343
            EK+IVFSQWT  LDLLE  L+    ++ R DG ++   R+K +K+FN   + ++++MSLK
Sbjct: 1128 EKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLK 1187

Query: 344  AASLGLNMIVACHVLLLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILAL 403
            A  +GLN+  A  V L+D WWNP  E+QAI R HRIGQ R V V R  V+DTVE+R+  +
Sbjct: 1188 AGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQV 1247

Query: 404  QQKKREMVSSAFGEDKAGGQQTRLTVEDLDYLF 437
            Q +K+ M++ A  +++    +    +E+L  LF
Sbjct: 1248 QARKQRMIAGALTDEEVRSAR----LEELKMLF 1276

[Close]
BLAST of CmoCh03G004960 vs. TrEMBL
Match: A0A0A0KN95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517140 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 2.2e-213
Identity = 389/426 (91.31%), Postives = 403/426 (94.60%), Query Frame = 1 

Query: 13   TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 72
            TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL
Sbjct: 862  TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 921

Query: 73   MLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDPP 132
            MLLRLRQACDHPLLVKPYDSKSLWRSS DVAKKLPR+KQIFLLNCLEASLAICGICNDPP
Sbjct: 922  MLLRLRQACDHPLLVKPYDSKSLWRSSADVAKKLPRDKQIFLLNCLEASLAICGICNDPP 981

Query: 133  EDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSEDN 192
            ED VVSECGHVFCKQCILEHLS DD QCPT GCKV LNASLLFSKSSLCNS+SDQL EDN
Sbjct: 982  EDGVVSECGHVFCKQCILEHLSSDDCQCPTGGCKVHLNASLLFSKSSLCNSNSDQLGEDN 1041

Query: 193  SVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASEKS 252
            SVVSS STVGDS+E SSSVMYESSKIKAALEVL+SLAKPKEYS   SP +LAVVGASEKS
Sbjct: 1042 SVVSSCSTVGDSMELSSSVMYESSKIKAALEVLMSLAKPKEYSRNTSP-ELAVVGASEKS 1101

Query: 253  IDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSSIQYRR 312
            +DA STE ++E  +CQDSTNK SCE +  G EKAIVFSQWTGMLDLLEA LKNSSIQYRR
Sbjct: 1102 MDASSTELRLESSECQDSTNKSSCELVKRGGEKAIVFSQWTGMLDLLEACLKNSSIQYRR 1161

Query: 313  LDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA 372
            LDGTMSVLARDKAVKDFNN+PEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA
Sbjct: 1162 LDGTMSVLARDKAVKDFNNLPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA 1221

Query: 373  IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRLTVEDL 432
            IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGED+AGG+QTRLTVEDL
Sbjct: 1222 IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDEAGGRQTRLTVEDL 1281

Query: 433  DYLFMM 439
            +YLFMM
Sbjct: 1282 NYLFMM 1286

[Close]
BLAST of CmoCh03G004960 vs. TrEMBL
Match: M5WMF8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000816mg PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 5.4e-164
Identity = 317/432 (73.38%), Postives = 353/432 (81.71%), Query Frame = 1 

Query: 12  GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
           GTLLDG+PI+TLPPK +ELK+V+F++EERDFYS+LEADSRAQ+EEYAAAGTVKQNYVNIL
Sbjct: 568 GTLLDGEPIITLPPKFIELKRVEFSKEERDFYSRLEADSRAQFEEYAAAGTVKQNYVNIL 627

Query: 72  LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
           LMLLRLRQACDHPLLV+ YDS SLWRSSV+ AKKLPR+KQ+ L+NCLEASLAICG+CNDP
Sbjct: 628 LMLLRLRQACDHPLLVRRYDSHSLWRSSVENAKKLPRDKQLSLMNCLEASLAICGLCNDP 687

Query: 132 PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
           PEDAVVSECGHVFC QCI EHL+GDD+QCP   CKVRLN S +FSK++L +S SDQ + D
Sbjct: 688 PEDAVVSECGHVFCSQCISEHLTGDDNQCPNTNCKVRLNVSSVFSKATLNSSLSDQPNPD 747

Query: 192 NSVVSSSSTVGDSVEP-SSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAV---VG 251
               S  S V D+VE       Y SSKIKAALEVL ++ KP+   S NS     V    G
Sbjct: 748 ----SIGSEVFDAVESFYEDHSYNSSKIKAALEVLCAMCKPQACISGNSCLDDRVERNAG 807

Query: 252 ASEKSIDAPSTEPQMEGPKCQD-STNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNS 311
             E S D    EP  + P  Q+      S  S  +  EKAIVFSQWT MLDLLEA LK S
Sbjct: 808 CPENSSDIRVVEPLEDVPNRQNLDVETCSKNSNKVVREKAIVFSQWTRMLDLLEACLKTS 867

Query: 312 SIQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNP 371
           SI+YRRLDGTMSV+ARDKAVKDFN +PEVSVMIMSLKAASLGLNM+ ACHVLLLDLWWNP
Sbjct: 868 SIEYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNP 927

Query: 372 TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTR 431
           TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMV+SAFGED+ GG+QTR
Sbjct: 928 TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVASAFGEDETGGRQTR 987

Query: 432 LTVEDLDYLFMM 439
           LTVEDL YLFMM
Sbjct: 988 LTVEDLKYLFMM 995

[Close]
BLAST of CmoCh03G004960 vs. TrEMBL
Match: F6GZ87_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00700 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.6e-160
Identity = 307/431 (71.23%), Postives = 356/431 (82.60%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            GTLLDG+PI+TLPPK VELKKVDF++EERDFYS+LEADSRAQ+E YAAAGTVKQNYVNIL
Sbjct: 970  GTLLDGEPIITLPPKSVELKKVDFSKEERDFYSRLEADSRAQFEVYAAAGTVKQNYVNIL 1029

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            LMLLRLRQACDHPLLVK Y+S S+WRSSV++AKKL REKQI+LLNCLE SLAICGICNDP
Sbjct: 1030 LMLLRLRQACDHPLLVKGYNSNSVWRSSVEMAKKLSREKQIYLLNCLEGSLAICGICNDP 1089

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PEDAVVS CGHVFC QCI EHL+ D++QCP+  CKV+LN S +FSK++L +S SD   +D
Sbjct: 1090 PEDAVVSICGHVFCNQCICEHLTSDENQCPSTNCKVQLNVSSVFSKATLKSSLSDLPVQD 1149

Query: 192  NSVVSSSSTVGDSVEP-SSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASE 251
             S   S S + ++ +P   S +Y+SSKI+AALEVL SL+KP++ +  NS  + +    S 
Sbjct: 1150 ISHHCSGSELVEAHDPCPESRLYDSSKIRAALEVLQSLSKPRDCTLGNSSLKSSNETTSG 1209

Query: 252  KSIDAPSTEPQMEGPKCQDST---NKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSS 311
                + S    +    C +     +KGS   +G   EKAIVFSQWT MLDLLE+ LKNSS
Sbjct: 1210 LENLSDSHSEGLLKETCDEKNVVLDKGSITVVG---EKAIVFSQWTRMLDLLESCLKNSS 1269

Query: 312  IQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPT 371
            IQYRRLDGTMSV+ARDKAVKDFN +PEVSVMIMSLKAASLGLNM+ ACHVLLLDLWWNPT
Sbjct: 1270 IQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNPT 1329

Query: 372  TEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRL 431
            TEDQAIDRAHRIGQTRPVTVLRLTV+DTVEDRILALQQKKREMV+SAFGED+ G +QTRL
Sbjct: 1330 TEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDETGSRQTRL 1389

Query: 432  TVEDLDYLFMM 439
            TV+DL YLFM+
Sbjct: 1390 TVDDLKYLFMV 1397

[Close]
BLAST of CmoCh03G004960 vs. TrEMBL
Match: A5AIW5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020421 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 2.1e-160
Identity = 307/430 (71.40%), Postives = 355/430 (82.56%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            GTLLDG+PI+TLPPK VELKKVDF++EERDFYS+LEADSRAQ+E YAAAGTVKQNYVNIL
Sbjct: 981  GTLLDGEPIITLPPKSVELKKVDFSKEERDFYSRLEADSRAQFEVYAAAGTVKQNYVNIL 1040

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            LMLLRLRQACDHPLLVK Y+S S+WRSSV++AKKL REKQI+LLNCLE SLAICGICNDP
Sbjct: 1041 LMLLRLRQACDHPLLVKGYNSNSVWRSSVEMAKKLSREKQIYLLNCLEGSLAICGICNDP 1100

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PEDAVVS CGHVFC QCI EHL+ D++QCP+  CKV+LN S +FSK++L +S SD   +D
Sbjct: 1101 PEDAVVSICGHVFCNQCICEHLTSDENQCPSTNCKVQLNVSSVFSKATLKSSLSDLPVQD 1160

Query: 192  NSVVSSSSTVGDSVEP-SSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASE 251
             S   S S + ++ +P   S +Y+SSKI+AALEVL SL+KP++ +  NS  + +    S 
Sbjct: 1161 ISHHCSGSELVEAHDPCPESRLYDSSKIRAALEVLQSLSKPRDCTLGNSSLKSSNETTSG 1220

Query: 252  KSIDAPSTEPQMEGPKCQDST---NKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSS 311
                + S    +    C +     +KGS   +G   EKAIVFSQWT MLDLLE+ LKNSS
Sbjct: 1221 LENLSDSHSEGLLKETCDEKNVVLDKGSITVVG---EKAIVFSQWTRMLDLLESCLKNSS 1280

Query: 312  IQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPT 371
            IQYRRLDGTMSV+ARDKAVKDFN +PEVSVMIMSLKAASLGLNM+ ACHVLLLDLWWNPT
Sbjct: 1281 IQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNPT 1340

Query: 372  TEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRL 431
            TEDQAIDRAHRIGQTRPVTVLRLTV+DTVEDRILALQQKKREMV+SAFGED+ G +QTRL
Sbjct: 1341 TEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDETGSRQTRL 1400

Query: 432  TVEDLDYLFM 438
            TV+DL YLFM
Sbjct: 1401 TVDDLKYLFM 1407

[Close]
BLAST of CmoCh03G004960 vs. TrEMBL
Match: K7L2N2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G192500 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 2.1e-160
Identity = 311/434 (71.66%), Postives = 356/434 (82.03%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            GTLLDG+PI++LPPK++ELKKVDF+ EERDFYSKLEADSRAQ++EYA AGTVKQNYVNIL
Sbjct: 916  GTLLDGEPIISLPPKYIELKKVDFSMEERDFYSKLEADSRAQFQEYADAGTVKQNYVNIL 975

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            LMLLRLRQACDHPLLVK Y+S SLWRSSV++AKKLP+EKQI LL CLE SLA+C ICNDP
Sbjct: 976  LMLLRLRQACDHPLLVKRYNSNSLWRSSVEMAKKLPQEKQISLLKCLEVSLALCSICNDP 1035

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PEDAVVS CGHVFC QCI EHLSGDD+QCP A CK +L+ S++FSK++L +  SDQ   D
Sbjct: 1036 PEDAVVSVCGHVFCNQCICEHLSGDDNQCPAANCKSQLSTSMVFSKATLNSCLSDQ-GCD 1095

Query: 192  NSVVSSSSTVGDSVEP-SSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASE 251
            NS  S S    +  EP S S  Y+SSKIKAALEVL SL KP+ Y+SK S S+ +     +
Sbjct: 1096 NS-PSCSGPEAEEAEPWSESKPYDSSKIKAALEVLKSLCKPQCYTSK-STSEHSTFREDK 1155

Query: 252  KSIDAPST----EPQMEGPKCQD--STNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLK 311
              +  PS     +   + P+ Q+    N+ S  S+ +  EKAIVFSQWT MLDLLEA LK
Sbjct: 1156 NCLGNPSIAKNGKSLKDSPESQNLSDENRSSNASVTVVGEKAIVFSQWTRMLDLLEACLK 1215

Query: 312  NSSIQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWW 371
            NSSI YRRLDGTMSV+ARDKAVKDFNN PEV+V+IMSLKAASLGLN++VACHVL+LDLWW
Sbjct: 1216 NSSINYRRLDGTMSVVARDKAVKDFNNCPEVTVIIMSLKAASLGLNLVVACHVLMLDLWW 1275

Query: 372  NPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQ 431
            NPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKR MV+SAFGED  G +Q
Sbjct: 1276 NPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKRMMVASAFGEDGTGDRQ 1335

Query: 432  TRLTVEDLDYLFMM 439
            TRLTV+DL YLFMM
Sbjct: 1336 TRLTVDDLKYLFMM 1346

[Close]
BLAST of CmoCh03G004960 vs. TAIR10
Match: AT1G11100.2 (AT1G11100.2 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 478.0 bits (1229), Expect = 6.2e-135
Identity = 260/426 (61.03%), Postives = 319/426 (74.88%), Query Frame = 1 

Query: 13   TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 72
            TLLDG+P+++LPPK +EL++VDFT+EERDFYSKLE DSR Q++EYA AGTVKQNYVNILL
Sbjct: 854  TLLDGKPVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILL 913

Query: 73   MLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDPP 132
            MLLRLRQAC HPLLV    S   W SS ++ KKLP EK  FLL+ LEASLAICGICN  P
Sbjct: 914  MLLRLRQACGHPLLV----SSLSWSSSAEMVKKLPYEKLTFLLHRLEASLAICGICNVAP 973

Query: 133  EDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSEDN 192
            +DAVVS CGHVFC QCI E L+ D++QCP + CKV L  S LFS+ +L N+  D    D 
Sbjct: 974  KDAVVSLCGHVFCNQCICECLTRDNNQCPLSYCKVGLEISSLFSRETLENAMLDLHKLDA 1033

Query: 193  SVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSS-KNSPSQLAVVGASEK 252
                ++S    S EP  ++   SSKIKAAL++L SL++P+  ++  N  +Q +  G + +
Sbjct: 1034 PCDRTTSDPVGSGEPCENLPCGSSKIKAALDILQSLSRPQSPATVMNDVNQSSENGENNQ 1093

Query: 253  SIDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSSIQYR 312
             +D   + P                  + +  EKAIVF+QWT MLDLLEAGLK+S IQYR
Sbjct: 1094 QLDKSFSLPATPAKSSVGGV-------VNVAGEKAIVFTQWTKMLDLLEAGLKSSGIQYR 1153

Query: 313  RLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQ 372
            R DG M+V ARD AV+DFN +P+VSVMIMSLKAASLGLNM+ ACHV++LDLWWNPTTEDQ
Sbjct: 1154 RFDGKMTVPARDAAVQDFNTLPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQ 1213

Query: 373  AIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRLTVED 432
            AIDRAHRIGQTRPV V+R TV+DTVEDRILALQQKKR+MV+SAFGE + G +++ L+VED
Sbjct: 1214 AIDRAHRIGQTRPVKVVRFTVKDTVEDRILALQQKKRKMVASAFGEHENGSRESHLSVED 1268

Query: 433  LDYLFM 438
            L+YLFM
Sbjct: 1274 LNYLFM 1268

[Close]
BLAST of CmoCh03G004960 vs. TAIR10
Match: AT1G61140.1 (AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 476.1 bits (1224), Expect = 2.3e-134
Identity = 268/428 (62.62%), Postives = 309/428 (72.20%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            G+LLDG+PI++LPPK +EL+KVDFT EERDFYSKLEA+SR Q+ EYA AGTVKQNYVNIL
Sbjct: 883  GSLLDGKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNIL 942

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            LMLLRLRQACDHPLLV    S + W SSV +AKK  +          +ASLAICGICND 
Sbjct: 943  LMLLRLRQACDHPLLVNGEYSFT-WESSVGLAKKQIQS---------DASLAICGICNDA 1002

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PEDAV S CGHVFCKQCI E L+GD + CP A C VRL  S L SK+ L ++  D   ++
Sbjct: 1003 PEDAVASVCGHVFCKQCIYERLTGDSNHCPFANCNVRLTISSLSSKTRLDDAMPDM--QE 1062

Query: 192  NSVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASEK 251
             +  +S S   D   P     Y SSKIKAALE+L SL K  + +  N  S+         
Sbjct: 1063 RATSNSLSPCSDEDLP-----YGSSKIKAALEILQSLPKAHDLTDSNQISE--------- 1122

Query: 252  SIDAPSTEPQMEGPKCQDSTNKGSCESIGIGV--EKAIVFSQWTGMLDLLEAGLKNSSIQ 311
                     +  G       N+G    + I V  EKAIVFSQWT ML+LLEA L +S IQ
Sbjct: 1123 -------NREYSGLSITPVKNEGMSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQ 1182

Query: 312  YRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTE 371
            YRRLDGTMSV ARDKAV+DFN +PEV+VMIMSLKAASLGLNM+ ACHVL+LDLWWNPTTE
Sbjct: 1183 YRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTE 1242

Query: 372  DQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRLTV 431
            DQAIDRAHRIGQTRPVTV+R TV+DTVEDRILALQQKKR MV+SAFGED+ G +Q+ LTV
Sbjct: 1243 DQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQQKKRMMVASAFGEDEKGSRQSHLTV 1277

Query: 432  EDLDYLFM 438
            EDL YLFM
Sbjct: 1303 EDLSYLFM 1277

[Close]
BLAST of CmoCh03G004960 vs. TAIR10
Match: AT1G50410.1 (AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 446.4 bits (1147), Expect = 2.0e-125
Identity = 242/431 (56.15%), Postives = 313/431 (72.62%), Query Frame = 1 

Query: 12  GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
           GTLLDGQPI+ LPPK + L +VDF+ EER FY KLE+DSR+Q++ YAAAGT+ QNY NIL
Sbjct: 567 GTLLDGQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANIL 626

Query: 72  LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
           LMLLRLRQACDHP LVK Y+S S+ + S +  KKLP+E  + LL+ LE+S  IC +C+DP
Sbjct: 627 LMLLRLRQACDHPQLVKRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESS-PICCVCHDP 686

Query: 132 PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQL--- 191
           PED VV+ CGH+FC QC+ ++++GD+  CP   C+ +L   ++FSKS+L +  +D L   
Sbjct: 687 PEDPVVTLCGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSKSTLRSCVADDLGCS 746

Query: 192 -SEDNSVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVG 251
            SEDNS   S    G+         + SSKIKA L++L SL+      + NS     +  
Sbjct: 747 SSEDNSHDKSVFQNGE---------FSSSKIKAVLDILQSLS---NQGTSNSTQNGQMAS 806

Query: 252 ASEKSIDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSS 311
           +S++  D    +   +     + T+  S  S G G  K I+FSQWTGMLDL+E  L  +S
Sbjct: 807 SSQQPND--DDDDDDDDVTIVEKTSLKSTPSNG-GPIKTIIFSQWTGMLDLVELSLIENS 866

Query: 312 IQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPT 371
           I++RRLDGTMS++ARD+AVK+F+N P+V VMIMSLKA +LGLNMI ACHV+LLDLWWNPT
Sbjct: 867 IEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPT 926

Query: 372 TEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRL 431
           TEDQAIDRAHRIGQTRPVTV R+T+++TVEDRILALQ++KR+MV+SAFGED  G   TRL
Sbjct: 927 TEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQEEKRKMVASAFGEDHGGSSATRL 981

Query: 432 TVEDLDYLFMM 439
           TV+DL YLFM+
Sbjct: 987 TVDDLKYLFMV 981

[Close]
BLAST of CmoCh03G004960 vs. TAIR10
Match: AT3G20010.1 (AT3G20010.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 429.5 bits (1103), Expect = 2.5e-120
Identity = 233/427 (54.57%), Postives = 296/427 (69.32%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            GTLLDG+PI+ LPPK V L +VDF+  ER FY KLEADSR+Q++ YA AGT+ QNY NIL
Sbjct: 638  GTLLDGKPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANIL 697

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            L+LLRLRQACDHP LVK Y+S  + + S    ++LPRE +  L+N LE+S AIC  CN+P
Sbjct: 698  LLLLRLRQACDHPQLVKRYNSDPVGKVSEAAVRRLPREARSRLINRLESSSAICYECNEP 757

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PE  VV+ CGH+FC +C+LE+++GD++ CP   CK +L   ++FS+SSL N  SD     
Sbjct: 758  PEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQQLARDVVFSESSLRNCTSD----- 817

Query: 192  NSVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASEK 251
            +S  SSS   G          + SSKIKA L++L SL++P   +S     Q+        
Sbjct: 818  DSGCSSSHDNGLDRSVFQKRDFCSSKIKAVLDILQSLSQPDSPNSAQH-GQMPSSSRPYD 877

Query: 252  SIDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSSIQYR 311
              D    EP            +    S   G  K I+FSQWTGMLDL+E  +  S I++R
Sbjct: 878  DDDVTIVEPM-----------RLHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFR 937

Query: 312  RLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQ 371
            RLDGTMS+ ARD+AVK+F+  P+V VM+MSLKA +LGLNM+ ACHV+LLDLWWNPTTEDQ
Sbjct: 938  RLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ 997

Query: 372  AIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRLTVED 431
            AIDRAHRIGQTRPVTV R+T++DTVEDRIL LQ++KR MV+SAFGE+  G   TRLTV+D
Sbjct: 998  AIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQEEKRTMVASAFGEEHGGSSATRLTVDD 1047

Query: 432  LDYLFMM 439
            L YLFM+
Sbjct: 1058 LKYLFMV 1047

[Close]
BLAST of CmoCh03G004960 vs. TAIR10
Match: AT3G16600.1 (AT3G16600.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-32
Identity = 67/162 (41.36%), Postives = 103/162 (63.58%), Query Frame = 1 

Query: 38  EERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKPYDSKSLWR 97
           +E  FY KLE +SR ++EEYAA GT+ ++   +L+MLLRLRQAC+HP LV  Y      R
Sbjct: 308 KEWSFYRKLELNSRWKFEEYAADGTLHEHMAYLLVMLLRLRQACNHPQLVNGYSHSDTTR 367

Query: 98  SSVDVAKKLPREKQIFLLNCLEASLAICGICNDPPEDAVVSECGHVFCKQCILEHLSGDD 157
              D  +  PRE  I  L+ L+ S   C +C+DPP+D VV+ CGHVFC +C+  +++GD+
Sbjct: 368 KMSDGVRVAPRENLIMFLDLLKLSSTTCSVCSDPPKDPVVTLCGHVFCYECVSVNINGDN 427

Query: 158 SQCPTAGCKVRLNASLLFSKSSL--CNSHSDQLSEDNSVVSS 198
           + CP   C  +L   ++F++S++  C +  D   + N++V+S
Sbjct: 428 NTCPALNCHSQLKHDVVFTESAVRSCINDYDDPEDKNALVAS 469

[Close]
BLAST of CmoCh03G004960 vs. NCBI nr
Match: gi|449434350|ref|XP_004134959.1| (PREDICTED: DNA repair protein RAD16 [Cucumis sativus])

HSP 1 Score: 749.6 bits (1934), Expect = 3.1e-213
Identity = 389/426 (91.31%), Postives = 403/426 (94.60%), Query Frame = 1 

Query: 13   TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 72
            TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL
Sbjct: 862  TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 921

Query: 73   MLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDPP 132
            MLLRLRQACDHPLLVKPYDSKSLWRSS DVAKKLPR+KQIFLLNCLEASLAICGICNDPP
Sbjct: 922  MLLRLRQACDHPLLVKPYDSKSLWRSSADVAKKLPRDKQIFLLNCLEASLAICGICNDPP 981

Query: 133  EDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSEDN 192
            ED VVSECGHVFCKQCILEHLS DD QCPT GCKV LNASLLFSKSSLCNS+SDQL EDN
Sbjct: 982  EDGVVSECGHVFCKQCILEHLSSDDCQCPTGGCKVHLNASLLFSKSSLCNSNSDQLGEDN 1041

Query: 193  SVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASEKS 252
            SVVSS STVGDS+E SSSVMYESSKIKAALEVL+SLAKPKEYS   SP +LAVVGASEKS
Sbjct: 1042 SVVSSCSTVGDSMELSSSVMYESSKIKAALEVLMSLAKPKEYSRNTSP-ELAVVGASEKS 1101

Query: 253  IDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSSIQYRR 312
            +DA STE ++E  +CQDSTNK SCE +  G EKAIVFSQWTGMLDLLEA LKNSSIQYRR
Sbjct: 1102 MDASSTELRLESSECQDSTNKSSCELVKRGGEKAIVFSQWTGMLDLLEACLKNSSIQYRR 1161

Query: 313  LDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA 372
            LDGTMSVLARDKAVKDFNN+PEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA
Sbjct: 1162 LDGTMSVLARDKAVKDFNNLPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA 1221

Query: 373  IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRLTVEDL 432
            IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGED+AGG+QTRLTVEDL
Sbjct: 1222 IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDEAGGRQTRLTVEDL 1281

Query: 433  DYLFMM 439
            +YLFMM
Sbjct: 1282 NYLFMM 1286

[Close]
BLAST of CmoCh03G004960 vs. NCBI nr
Match: gi|659078753|ref|XP_008439888.1| (PREDICTED: DNA repair protein RAD16-like [Cucumis melo])

HSP 1 Score: 742.7 bits (1916), Expect = 3.8e-211
Identity = 385/426 (90.38%), Postives = 399/426 (93.66%), Query Frame = 1 

Query: 13   TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 72
            TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL
Sbjct: 812  TLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNILL 871

Query: 73   MLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDPP 132
            MLLRLRQACDHPLLVKPYDSK+LWRSS DVAKKLPR+KQIFLLNCLEASLAICGICNDPP
Sbjct: 872  MLLRLRQACDHPLLVKPYDSKTLWRSSADVAKKLPRDKQIFLLNCLEASLAICGICNDPP 931

Query: 133  EDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSEDN 192
            ED VVSECGHVFCKQCILEHLS DD QCP AGCKV LNAS LFSKSSLC SHSDQL EDN
Sbjct: 932  EDGVVSECGHVFCKQCILEHLSSDDCQCPIAGCKVHLNASSLFSKSSLCTSHSDQLGEDN 991

Query: 193  SVVSSSSTVGDSVEPSSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAVVGASEKS 252
            S VSS STVGDSVE SSSVMYESSKIKAALEVL+SLAKPKE   + +P QLAVVGASEKS
Sbjct: 992  SGVSSCSTVGDSVELSSSVMYESSKIKAALEVLMSLAKPKECYLRKTPPQLAVVGASEKS 1051

Query: 253  IDAPSTEPQMEGPKCQDSTNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNSSIQYRR 312
            +DA STE ++E  +CQDSTNK SCE +  G EKAIVFSQWTGMLDLLEA LKNSSIQYRR
Sbjct: 1052 MDASSTELRLESSECQDSTNKSSCELVKRGGEKAIVFSQWTGMLDLLEACLKNSSIQYRR 1111

Query: 313  LDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA 372
            LDGTMSVLARDKAVKDFNN+PEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA
Sbjct: 1112 LDGTMSVLARDKAVKDFNNLPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNPTTEDQA 1171

Query: 373  IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTRLTVEDL 432
            IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGED+AGG+QTRLTVEDL
Sbjct: 1172 IDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDEAGGRQTRLTVEDL 1231

Query: 433  DYLFMM 439
            +YLFMM
Sbjct: 1232 NYLFMM 1237

[Close]
BLAST of CmoCh03G004960 vs. NCBI nr
Match: gi|595894487|ref|XP_007213695.1| (hypothetical protein PRUPE_ppa000816mg [Prunus persica])

HSP 1 Score: 585.5 bits (1508), Expect = 7.8e-164
Identity = 317/432 (73.38%), Postives = 353/432 (81.71%), Query Frame = 1 

Query: 12  GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
           GTLLDG+PI+TLPPK +ELK+V+F++EERDFYS+LEADSRAQ+EEYAAAGTVKQNYVNIL
Sbjct: 568 GTLLDGEPIITLPPKFIELKRVEFSKEERDFYSRLEADSRAQFEEYAAAGTVKQNYVNIL 627

Query: 72  LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
           LMLLRLRQACDHPLLV+ YDS SLWRSSV+ AKKLPR+KQ+ L+NCLEASLAICG+CNDP
Sbjct: 628 LMLLRLRQACDHPLLVRRYDSHSLWRSSVENAKKLPRDKQLSLMNCLEASLAICGLCNDP 687

Query: 132 PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
           PEDAVVSECGHVFC QCI EHL+GDD+QCP   CKVRLN S +FSK++L +S SDQ + D
Sbjct: 688 PEDAVVSECGHVFCSQCISEHLTGDDNQCPNTNCKVRLNVSSVFSKATLNSSLSDQPNPD 747

Query: 192 NSVVSSSSTVGDSVEP-SSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAV---VG 251
               S  S V D+VE       Y SSKIKAALEVL ++ KP+   S NS     V    G
Sbjct: 748 ----SIGSEVFDAVESFYEDHSYNSSKIKAALEVLCAMCKPQACISGNSCLDDRVERNAG 807

Query: 252 ASEKSIDAPSTEPQMEGPKCQD-STNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNS 311
             E S D    EP  + P  Q+      S  S  +  EKAIVFSQWT MLDLLEA LK S
Sbjct: 808 CPENSSDIRVVEPLEDVPNRQNLDVETCSKNSNKVVREKAIVFSQWTRMLDLLEACLKTS 867

Query: 312 SIQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNP 371
           SI+YRRLDGTMSV+ARDKAVKDFN +PEVSVMIMSLKAASLGLNM+ ACHVLLLDLWWNP
Sbjct: 868 SIEYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNP 927

Query: 372 TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTR 431
           TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMV+SAFGED+ GG+QTR
Sbjct: 928 TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVASAFGEDETGGRQTR 987

Query: 432 LTVEDLDYLFMM 439
           LTVEDL YLFMM
Sbjct: 988 LTVEDLKYLFMM 995

[Close]
BLAST of CmoCh03G004960 vs. NCBI nr
Match: gi|645236969|ref|XP_008224991.1| (PREDICTED: ATP-dependent helicase ULS1 [Prunus mume])

HSP 1 Score: 582.4 bits (1500), Expect = 6.6e-163
Identity = 316/432 (73.15%), Postives = 352/432 (81.48%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            GTLLDG+PI+TLPPK +ELK+V+F++EERDFYS+LEADSRAQ+EEYAAAGTVKQNYVNIL
Sbjct: 952  GTLLDGEPIITLPPKFIELKRVEFSKEERDFYSRLEADSRAQFEEYAAAGTVKQNYVNIL 1011

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            LMLLRLRQACDHPLLV+ YDS SLWRSSV+ AKKLPR+KQ+ L+NCLEASLAIC +CNDP
Sbjct: 1012 LMLLRLRQACDHPLLVRRYDSHSLWRSSVENAKKLPRDKQLLLMNCLEASLAICSLCNDP 1071

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PEDAVVSECGHVFC QCI EHL+GDD+QCP   CKVRLN S +FSK++L +S SDQ + D
Sbjct: 1072 PEDAVVSECGHVFCSQCISEHLTGDDNQCPNTNCKVRLNVSSVFSKATLNSSLSDQPNPD 1131

Query: 192  NSVVSSSSTVGDSVEP-SSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAV---VG 251
                S  S V D+VE       Y SSKIKAALEVL ++ KP+   S NS     V    G
Sbjct: 1132 ----SIGSEVFDAVESFYEDHSYNSSKIKAALEVLCAMCKPQACISGNSCLDDQVDRNAG 1191

Query: 252  ASEKSIDAPSTEPQMEGPKCQD-STNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLKNS 311
              E S D    EP  + P  Q+      S  S  +  EKAIVFSQWT MLDLLEA LK S
Sbjct: 1192 CPENSSDICVVEPLEDVPNRQNLDVVTCSKNSNKVVREKAIVFSQWTRMLDLLEACLKTS 1251

Query: 312  SIQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWWNP 371
            SI+YRRLDGTMSV+ARDKAVKDFN +PEVSVMIMSLKAASLGLNM+ ACHVLLLDLWWNP
Sbjct: 1252 SIEYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNP 1311

Query: 372  TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQTR 431
            TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMV+SAFGED+ GG+QTR
Sbjct: 1312 TTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVASAFGEDETGGRQTR 1371

Query: 432  LTVEDLDYLFMM 439
            LTVEDL YLFMM
Sbjct: 1372 LTVEDLKYLFMM 1379

[Close]
BLAST of CmoCh03G004960 vs. NCBI nr
Match: gi|657959539|ref|XP_008371319.1| (PREDICTED: uncharacterized protein LOC103434741 isoform X1 [Malus domestica])

HSP 1 Score: 581.3 bits (1497), Expect = 1.5e-162
Identity = 318/434 (73.27%), Postives = 356/434 (82.03%), Query Frame = 1 

Query: 12   GTLLDGQPIVTLPPKHVELKKVDFTEEERDFYSKLEADSRAQYEEYAAAGTVKQNYVNIL 71
            GTLLDG+PI+TLPPK +ELK+V+F++EERDFYS+LEADSRAQ+EEYAAAGTVKQNYVNIL
Sbjct: 961  GTLLDGEPIITLPPKSIELKRVEFSKEERDFYSRLEADSRAQFEEYAAAGTVKQNYVNIL 1020

Query: 72   LMLLRLRQACDHPLLVKPYDSKSLWRSSVDVAKKLPREKQIFLLNCLEASLAICGICNDP 131
            LMLLRLRQACDHPLLV+ YDS SLWRSSV+ AKKLPR+KQ  LLNCLEASLAIC ICNDP
Sbjct: 1021 LMLLRLRQACDHPLLVRRYDSNSLWRSSVENAKKLPRDKQQSLLNCLEASLAICSICNDP 1080

Query: 132  PEDAVVSECGHVFCKQCILEHLSGDDSQCPTAGCKVRLNASLLFSKSSLCNSHSDQLSED 191
            PEDAVVSECGHVFC QCI EHL+GDD+QCP+  CKVRL+AS +FSK++L +S SDQ + +
Sbjct: 1081 PEDAVVSECGHVFCSQCINEHLTGDDNQCPSTNCKVRLHASSVFSKATLNSSLSDQTNPE 1140

Query: 192  NSVVSSSSTVGDSVEP-SSSVMYESSKIKAALEVLVSLAKPKEYSSKNSPSQLAV---VG 251
                S  S V D+VE       Y SSKIKAAL+VL ++ KP+   S NS  +  V     
Sbjct: 1141 ----SIGSEVFDAVETFYEDRSYNSSKIKAALDVLCAMCKPQGCISGNSCIEDTVDRNAN 1200

Query: 252  ASEKSIDAPSTEPQMEGPKCQD---STNKGSCESIGIGVEKAIVFSQWTGMLDLLEAGLK 311
            +SEKS D    EP  + PK Q+    TN  + +   +  EKAIVFSQWT MLDLLE  LK
Sbjct: 1201 SSEKSSDICVVEPPEDVPKRQNLDLVTNPQNSKK--VVREKAIVFSQWTRMLDLLEDCLK 1260

Query: 312  NSSIQYRRLDGTMSVLARDKAVKDFNNVPEVSVMIMSLKAASLGLNMIVACHVLLLDLWW 371
             SSI+YRRLDGTMSV ARDKAVKDFN +PEV+VMIMSLKAASLGLNM+ ACHVLLLDLWW
Sbjct: 1261 TSSIEYRRLDGTMSVTARDKAVKDFNTLPEVTVMIMSLKAASLGLNMVAACHVLLLDLWW 1320

Query: 372  NPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKAGGQQ 431
            NPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDK GG Q
Sbjct: 1321 NPTTEDQAIDRAHRIGQTRPVTVLRLTVRDTVEDRILALQQKKREMVSSAFGEDKTGGGQ 1380

Query: 432  TRLTVEDLDYLFMM 439
            TRLTVEDL YLFMM
Sbjct: 1381 TRLTVEDLKYLFMM 1388

The following BLAST results are available for this feature:
BLAST of CmoCh03G004960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHR28_ARATH3.5e-12456.15Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana GN=CHR28 PE=1 S... [more]
CHR27_ARATH4.5e-11954.57Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana GN=CHR27 PE=1 S... [more]
YG42_SCHPO9.2e-4830.39Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (st... [more]
YF2C_SCHPO3.5e-3931.25Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (st... [more]
SM3L3_ARATH7.8e-3143.79Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati... [more]
BLAST of CmoCh03G004960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN95_CUCSA2.2e-21391.31Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517140 PE=4 SV=1[more]
M5WMF8_PRUPE5.4e-16473.38Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000816mg PE=4 SV=1[more]
F6GZ87_VITVI1.6e-16071.23Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00700 PE=4 SV=... [more]
A5AIW5_VITVI2.1e-16071.40Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020421 PE=4 SV=1[more]
K7L2N2_SOYBN2.1e-16071.66Uncharacterized protein OS=Glycine max GN=GLYMA_07G192500 PE=4 SV=1[more]
BLAST of CmoCh03G004960 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11100.26.2e-13561.03 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT1G61140.12.3e-13462.62 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT1G50410.12.0e-12556.15 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT3G20010.12.5e-12054.57 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT3G16600.12.0e-3241.36 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
BLAST of CmoCh03G004960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434350|ref|XP_004134959.1|3.1e-21391.31PREDICTED: DNA repair protein RAD16 [Cucumis sativus][more]
gi|659078753|ref|XP_008439888.1|3.8e-21190.38PREDICTED: DNA repair protein RAD16-like [Cucumis melo][more]
gi|595894487|ref|XP_007213695.1|7.8e-16473.38hypothetical protein PRUPE_ppa000816mg [Prunus persica][more]
gi|645236969|ref|XP_008224991.1|6.6e-16373.15PREDICTED: ATP-dependent helicase ULS1 [Prunus mume][more]
gi|657959539|ref|XP_008371319.1|1.5e-16273.27PREDICTED: uncharacterized protein LOC103434741 isoform X1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR018957Znf_C3HC4_RING-type
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004386 helicase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G004960.1CmoCh03G004960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 284..380
score: 3.0
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 297..380
score: 1.1
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 275..433
score: 14
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 125..163
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 125..161
score: 10
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 123..177
score: 1.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 140..149
scor
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 125..161
score: 1.
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 193..232
score: 4.8E-15coord: 284..412
score: 4.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 18..89
score: 6.33E-54coord: 284..436
score: 6.33E-54coord: 208..232
score: 6.33
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 140..165
score: 2.8E-201coord: 207..229
score: 2.8E-201coord: 280..438
score: 2.8E-201coord: 12..88
score: 2.8E
NoneNo IPR availablePANTHERPTHR10799:SF705SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 140..165
score: 2.8E-201coord: 207..229
score: 2.8E-201coord: 12..88
score: 2.8E-201coord: 280..438
score: 2.8E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 122..170
score: 2.06

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh03G004960Cucsa.046030Cucumber (Gy14) v1cgycmoB0042
CmoCh03G004960CmaCh03G004780Cucurbita maxima (Rimu)cmacmoB653
CmoCh03G004960CmaCh07G002640Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G004960Cla001372Watermelon (97103) v1cmowmB623
CmoCh03G004960Csa6G517140Cucumber (Chinese Long) v2cmocuB670
CmoCh03G004960MELO3C007305Melon (DHL92) v3.5.1cmomeB600
CmoCh03G004960ClCG01G022760Watermelon (Charleston Gray)cmowcgB575
CmoCh03G004960CSPI06G34400Wild cucumber (PI 183967)cmocpiB681
CmoCh03G004960Lsi01G003370Bottle gourd (USVL1VR-Ls)cmolsiB582
CmoCh03G004960Cp4.1LG10g09260Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G004960Cp4.1LG19g07450Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G004960MELO3C007305.2Melon (DHL92) v3.6.1cmomedB686
CmoCh03G004960CsaV3_6G049920Cucumber (Chinese Long) v3cmocucB0793
CmoCh03G004960Cla97C01G022640Watermelon (97103) v2cmowmbB642
CmoCh03G004960Bhi03G000345Wax gourdcmowgoB0781
CmoCh03G004960CsGy6G033960Cucumber (Gy14) v2cgybcmoB811
CmoCh03G004960Carg13757Silver-seed gourdcarcmoB1246
CmoCh03G004960Carg07797Silver-seed gourdcarcmoB0886
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh03G004960CmoCh07G002540Cucurbita moschata (Rifu)cmocmoB455
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G004960Silver-seed gourdcarcmoB0045
CmoCh03G004960Cucurbita moschata (Rifu)cmocmoB182
CmoCh03G004960Cucurbita moschata (Rifu)cmocmoB335
CmoCh03G004960Cucurbita moschata (Rifu)cmocmoB362
CmoCh03G004960Cucurbita moschata (Rifu)cmocmoB428
CmoCh03G004960Cucurbita maxima (Rimu)cmacmoB235
CmoCh03G004960Cucumber (Chinese Long) v2cmocuB637
CmoCh03G004960Melon (DHL92) v3.5.1cmomeB581
CmoCh03G004960Cucurbita pepo (Zucchini)cmocpeB631