CmoCh03G003350 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCTTAAGTTTAGGCAGTAGTTTGTTTGGGGAATATCAAGCTATAATGAGTTGCCCCCACAACCTTTGCTGTGTGTATGAGGTACAACCTTCTACAATTTCATTCCCTGCCTTTTGTCACTTGAAGATTCACTCTGTTTGATATGATTTCATATATTCCATACGAAATGTTCTGTTCTTGATTGGATTCTTATCATAATGTGGCTACTTCCTTGTGTTTTTTTAATGAATTCTCAAAGATCCCATTCAGGAAAAAGCTTTTATGTACTTACTTTCCAGCTCTAAGGTGCTGTTTGGGTGTACTTTTTGGTGTCTTTTCTTTCTTTTTTTCAGAGATTTGTGATTGAGAATGAATTCTGATTTGTTCACATGTTCTTGCGCATTGATCTCTAGTGTTCATTGTACTTGAAGGTTCCTCTCAAATCACGATAAGATAAGAACCAATATATGGATAAAATGGTAAGTGATGAAATTTATTTGGAGGATACTGATTATTTGGAAGAAAAAACCTTCCTTTTTTGCTCATTTTTAACAAGTTGAGCTCCCTTCCCGAGAAGGATAACTTCATTGGTGAAATTATCAGGCAGGTATTGCATCGAGTTAGAACACTTGTTTGTCGTGTTTGTCGTAGTATACGACGCTGCACACGTGATGGATGAATTTGAAGCACAATCACAATCATAACGTTACAAGTGATTCAATATACCATATAGAAATAATATAATAAAAGGAGTAACTCTCGATTTTGAAGGGTTGACTTTGTTGTGCTTGATTGATGGTAAGAATATTCGTAATATTTTAGAAAGTGGAGAATGTATCCTTATAATTGATTTGGCAAAAAGAATGTTCGTAACATTTTAGAAAGTGGAGAATATTGACTTTGTTGAGCTTGTTCGATGGTAAGAATGTTCATAACATTTTAGAAAATGGAGAATGAGTCCTTACTATTGATTTGGCAATAAAAATGCCATTTTAGAAAGTGAAAGATGTATCCTCTTATAAAAAATCGATGCATTAAGAGTATCATAAAAAAGGAACTTATGGGAACTTAGCTGGAATAGGGGCGAGGATTATCCGTTTATCGATTTAGAAGGGAATAGGATAATAGGATAAATACGAGAAAATGTCAATGAGGATCTCAATTTAATACTAATTTTGAAGGTAAATTATATAAGTTTAATAGTGAATTTTTTAAATTAATAAATTTATAAAATGGTTTAATGAATCTCTAAATTTTTTTAATTTAATTGGTGTCTAATAAAGAGTTAAAAGTGTCGATTTTTTTAAATTTTTTAAAGATATCTATATTAGTTTAGGTTTTTATAATTAATGCGATTATTATTTAAACAATTAAAAGTAGAAGGGGAAAGCAAAGCACTTTGCTGCTGCTGACAAAGACGCGGTGAGATCGAGTAGGGATAATTACGTAAATTGACCCACACACACCATCCGTGCGGATGGGGCCCACACGCAGACAGATATTTATTATTTATTATTTATTTATTTATTTATTATTATTATTATTATTATTTTCTTTTAAAAAAGAAAAAGACAGAGATATATTACTTGGGGAACAAGTAGCTTTTGCCTTTAATCCTATTCATATTTATCCTCACACCTCCATTTTCTTTTCTTTAATTTTATTCTTTTCTTCTCATTTTATTATTTTTTTTTTACCAAAAAACACATAAAATTACAAATTCAATCTCTAATTTTTTGATTTTATATTCTTTTAAAATTAAAAATAATGTTGATATTTTTTTAAGTAATTATTAAATTTATGAAAAAGTTAATTAAATATAAATAAAATTACCAAATATGAAATTTCGGTTAAAAAAAAACTTCGTGGCTAAGAAAGCAAAGAGTTGCTTGAATTCCTCACCATTCCTCCAAACTCATCCATCACGTCATCAAAATTTTGGATATTTCCAGAGCTTCATAATGGCTTTTCATTTCATACAGGTTTGTTATAAAACCCCTTCTCCTTCCCTTTCCTTCTCCTTTGCTTCTCTTCTCTCCTGAAACTCTCAAAATTTTACTTGTAAGATCAGTAAGTTGCAAACAGAAACAAGAGGCCACCGAAGTGTTGCAATCAGTGAGGAGTTTGAAGCGCATGACGTCTGAGAATTCTAATGGGTAAGTTGAGTTTTCTGTTTAAATTTGATGTATTGTTCTTGTTCATGGCCAAATTTTTCTGGGTTTTGATTGTTTGAGAGATGGCTGAAGAGGGCTGTTTTTTGATTGCAGAGAAAAGATATCAAGAAAGAGGCGAAATGGGTTTGTTTCTGTAGTGGACACTTTGAACAAGTGGAAGAAATTGAATAATCAATTGGAGTTTTTGGCCAAAGATGGAGTAGAGGAAGTTCGTAGAGTTCCAGCCAAGGGCTCCAAGAAGGGTTGCATGAGAGGGAAAGGAGGTCCGCAGAATTCGGACTGTAATTTCAGAGGTGTTAGGCAGAGGACTTGGGGCAAGTGGGTGGCTGAGATTAGAGAGCCTATTGCTAGCAATAATACCCGTGTGAAGAAGAAAGGCAGTCGTTTATGGCTTGGTACCTTTGCCACTGCTCACCAGGCTGCTGTTGCTTATGATGAAGCTGCCAAAGCCATGTATGGCCCTTTTGCTCGTCTCAATTTTCCCGACGACTCTTCTTCTTTGAAACCAGTAACAGCAGAGCATTCGGACACGGTATCCCCTGTTGCTTCTTCATCTTCTTCCTCTTCCTTCTTAAATGGAGTATCTGCAGAGAAACTGAACTGTGAGTATGAATCAATGGAGGAACCGAAAGTGAAAGTGGAAGAAACAGCAAGAAATGGAGTCAATTATACAGATGCTAATCCCAATTCTGTTTATGATTCTAACAACATTGGGAACAGATCAACAGAAGGAGATATCAAGGATGGATTAGCTGATGTTGTAAGAAGCCATGATATTAATAAATACAGCCAAGATCAGAATGATCCTTCTGAGCTTTGTTTCAAATTTGAAGCAATGGATACAAATGGCTACAATGACATCAACGATTGCAATCAATATTTGCTACAGAAGCTTCAGAGTGATGCATATGCAAGAAGAACTTACTGGATTCCAGCGGAATGGGAGGTCGGCGGTCTCGGGCCGACGACGAAGGTGATGGAAGGAAAGGGAACGGAGATGGAGAGCTATGTAGACTGTATGGACTTCAACCGTGATCTGAGTTTGTTGCTGGATCGGCAAAAACACATGGGAGTTGGAGATCAGAGAGTTGATGATTGTAACTTCGAGTTCTTGAGACCTGATTATGATTTTGGGTTGGAGGAGGAAAGGAAATGGCTTGATTCATGCTTCCATGGATGAAGATTGATAGATTATAGGCAGGGTAGATTTTTGGTTTTGTTGGGCTACAATTGTATTCTATTTTTTGACGTACATAGTAGTTTCATTTCTTCTCCTATATGCAGACGCCTGTTCTTGTGTGCACCTTTAATAAAATGAGATTTAGAATGATGTATAAATGTTCATATCTTC ATGATCTTAAGTTTAGGCAGTAGTTTGTTTGGGGAATATCAAGCTATAATGAGTTGCCCCCACAACCTTTGCTGTGTGTTTGTTATAAAACCCCTTCTCCTTCCCTTTCCTTCTCCTTTGCTTCTCTTCTCTCCTGAAACTCTCAAAATTTTACTTGTAAGATCAGTAAGTTGCAAACAGAAACAAGAGGCCACCGAAGTGTTGCAATCAGTGAGGAGTTTGAAGCGCATGACGTCTGAGAATTCTAATGGAGAAAAGATATCAAGAAAGAGGCGAAATGGGTTTGTTTCTGTAGTGGACACTTTGAACAAGTGGAAGAAATTGAATAATCAATTGGAGTTTTTGGCCAAAGATGGAGTAGAGGAAGTTCGTAGAGTTCCAGCCAAGGGCTCCAAGAAGGGTTGCATGAGAGGGAAAGGAGGTCCGCAGAATTCGGACTGTAATTTCAGAGGTGTTAGGCAGAGGACTTGGGGCAAGTGGGTGGCTGAGATTAGAGAGCCTATTGCTAGCAATAATACCCGTGTGAAGAAGAAAGGCAGTCGTTTATGGCTTGGTACCTTTGCCACTGCTCACCAGGCTGCTGTTGCTTATGATGAAGCTGCCAAAGCCATGTATGGCCCTTTTGCTCGTCTCAATTTTCCCGACGACTCTTCTTCTTTGAAACCAGTAACAGCAGAGCATTCGGACACGGTATCCCCTGTTGCTTCTTCATCTTCTTCCTCTTCCTTCTTAAATGGAGTATCTGCAGAGAAACTGAACTGTGAGTATGAATCAATGGAGGAACCGAAAGTGAAAGTGGAAGAAACAGCAAGAAATGGAGTCAATTATACAGATGCTAATCCCAATTCTGTTTATGATTCTAACAACATTGGGAACAGATCAACAGAAGGAGATATCAAGGATGGATTAGCTGATGTTGTAAGAAGCCATGATATTAATAAATACAGCCAAGATCAGAATGATCCTTCTGAGCTTTGTTTCAAATTTGAAGCAATGGATACAAATGGCTACAATGACATCAACGATTGCAATCAATATTTGCTACAGAAGCTTCAGAGTGATGCATATGCAAGAAGAACTTACTGGATTCCAGCGGAATGGGAGGTCGGCGGTCTCGGGCCGACGACGAAGGTGATGGAAGGAAAGGGAACGGAGATGGAGAGCTATGTAGACTGTATGGACTTCAACCGTGATCTGAGTTTGTTGCTGGATCGGCAAAAACACATGGGAGTTGGAGATCAGAGAGTTGATGATTGTAACTTCGAGTTCTTGAGACCTGATTATGATTTTGGGTTGGAGGAGGAAAGGAAATGGCTTGATTCATGCTTCCATGGATGAAGATTGATAGATTATAGGCAGGGTAGATTTTTGGTTTTGTTGGGCTACAATTGTATTCTATTTTTTGACGTACATAGTAGTTTCATTTCTTCTCCTATATGCAGACGCCTGTTCTTGTGTGCACCTTTAATAAAATGAGATTTAGAATGATGTATAAATGTTCATATCTTC ATGATCTTAAGTTTAGGCAGTAGTTTGTTTGGGGAATATCAAGCTATAATGAGTTGCCCCCACAACCTTTGCTGTGTGTTTGTTATAAAACCCCTTCTCCTTCCCTTTCCTTCTCCTTTGCTTCTCTTCTCTCCTGAAACTCTCAAAATTTTACTTGTAAGATCAGTAAGTTGCAAACAGAAACAAGAGGCCACCGAAGTGTTGCAATCAGTGAGGAGTTTGAAGCGCATGACGTCTGAGAATTCTAATGGAGAAAAGATATCAAGAAAGAGGCGAAATGGGTTTGTTTCTGTAGTGGACACTTTGAACAAGTGGAAGAAATTGAATAATCAATTGGAGTTTTTGGCCAAAGATGGAGTAGAGGAAGTTCGTAGAGTTCCAGCCAAGGGCTCCAAGAAGGGTTGCATGAGAGGGAAAGGAGGTCCGCAGAATTCGGACTGTAATTTCAGAGGTGTTAGGCAGAGGACTTGGGGCAAGTGGGTGGCTGAGATTAGAGAGCCTATTGCTAGCAATAATACCCGTGTGAAGAAGAAAGGCAGTCGTTTATGGCTTGGTACCTTTGCCACTGCTCACCAGGCTGCTGTTGCTTATGATGAAGCTGCCAAAGCCATGTATGGCCCTTTTGCTCGTCTCAATTTTCCCGACGACTCTTCTTCTTTGAAACCAGTAACAGCAGAGCATTCGGACACGGTATCCCCTGTTGCTTCTTCATCTTCTTCCTCTTCCTTCTTAAATGGAGTATCTGCAGAGAAACTGAACTGTGAGTATGAATCAATGGAGGAACCGAAAGTGAAAGTGGAAGAAACAGCAAGAAATGGAGTCAATTATACAGATGCTAATCCCAATTCTGTTTATGATTCTAACAACATTGGGAACAGATCAACAGAAGGAGATATCAAGGATGGATTAGCTGATGTTGTAAGAAGCCATGATATTAATAAATACAGCCAAGATCAGAATGATCCTTCTGAGCTTTGTTTCAAATTTGAAGCAATGGATACAAATGGCTACAATGACATCAACGATTGCAATCAATATTTGCTACAGAAGCTTCAGAGTGATGCATATGCAAGAAGAACTTACTGGATTCCAGCGGAATGGGAGGTCGGCGGTCTCGGGCCGACGACGAAGGTGATGGAAGGAAAGGGAACGGAGATGGAGAGCTATGTAGACTGTATGGACTTCAACCGTGATCTGAGTTTGTTGCTGGATCGGCAAAAACACATGGGAGTTGGAGATCAGAGAGTTGATGATTGTAACTTCGAGTTCTTGAGACCTGATTATGATTTTGGGTTGGAGGAGGAAAGGAAATGGCTTGATTCATGCTTCCATGGATGA
BLAST of CmoCh03G003350 vs. Swiss-Prot
Match: DRE2B_ORYSJ (Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonica GN=DREB2B PE=2 SV=2) HSP 1 Score: 158.3 bits (399), Expect = 1.9e-37 Identity = 79/129 (61.24%), Postives = 95/129 (73.64%), Query Frame = 1
BLAST of CmoCh03G003350 vs. Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.4e-37 Identity = 84/146 (57.53%), Postives = 99/146 (67.81%), Query Frame = 1
BLAST of CmoCh03G003350 vs. Swiss-Prot
Match: DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.6e-36 Identity = 83/155 (53.55%), Postives = 107/155 (69.03%), Query Frame = 1
BLAST of CmoCh03G003350 vs. Swiss-Prot
Match: DRE2E_ARATH (Dehydration-responsive element-binding protein 2E OS=Arabidopsis thaliana GN=DREB2E PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.4e-35 Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1
BLAST of CmoCh03G003350 vs. Swiss-Prot
Match: DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2) HSP 1 Score: 146.7 bits (369), Expect = 5.9e-34 Identity = 74/134 (55.22%), Postives = 96/134 (71.64%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TrEMBL
Match: A0A0A0L2R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G314390 PE=4 SV=1) HSP 1 Score: 579.3 bits (1492), Expect = 3.9e-162 Identity = 306/383 (79.90%), Postives = 326/383 (85.12%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TrEMBL
Match: M5WSK1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022996mg PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 125/273 (45.79%), Postives = 161/273 (58.97%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TrEMBL
Match: K7L1Z0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G156200 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44 Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TrEMBL
Match: K0GYZ0_SOYBN (DRE-binding protein 2D1 OS=Glycine max GN=DREB2D;1 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44 Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TrEMBL
Match: A0A0B2PXX9_GLYSO (Dehydration-responsive element-binding protein 2C OS=Glycine soja GN=glysoja_031290 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44 Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TAIR10
Match: AT3G11020.1 (AT3G11020.1 DRE/CRT-binding protein 2B) HSP 1 Score: 156.4 bits (394), Expect = 4.2e-38 Identity = 84/146 (57.53%), Postives = 99/146 (67.81%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TAIR10
Match: AT5G05410.1 (AT5G05410.1 DRE-binding protein 2A) HSP 1 Score: 155.2 bits (391), Expect = 9.3e-38 Identity = 83/155 (53.55%), Postives = 107/155 (69.03%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TAIR10
Match: AT2G38340.1 (AT2G38340.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 152.1 bits (383), Expect = 7.9e-37 Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TAIR10
Match: AT2G40340.1 (AT2G40340.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 140.6 bits (353), Expect = 2.4e-33 Identity = 85/198 (42.93%), Postives = 121/198 (61.11%), Query Frame = 1
BLAST of CmoCh03G003350 vs. TAIR10
Match: AT2G40350.1 (AT2G40350.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 135.2 bits (339), Expect = 9.9e-32 Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 1
BLAST of CmoCh03G003350 vs. NCBI nr
Match: gi|659128486|ref|XP_008464230.1| (PREDICTED: ethylene-responsive transcription factor ERF036-like [Cucumis melo]) HSP 1 Score: 585.1 bits (1507), Expect = 1.0e-163 Identity = 309/384 (80.47%), Postives = 329/384 (85.68%), Query Frame = 1
BLAST of CmoCh03G003350 vs. NCBI nr
Match: gi|449461791|ref|XP_004148625.1| (PREDICTED: dehydration-responsive element-binding protein 2A-like [Cucumis sativus]) HSP 1 Score: 579.3 bits (1492), Expect = 5.6e-162 Identity = 306/383 (79.90%), Postives = 326/383 (85.12%), Query Frame = 1
BLAST of CmoCh03G003350 vs. NCBI nr
Match: gi|595843312|ref|XP_007208591.1| (hypothetical protein PRUPE_ppa022996mg, partial [Prunus persica]) HSP 1 Score: 189.1 bits (479), Expect = 1.6e-44 Identity = 125/273 (45.79%), Postives = 161/273 (58.97%), Query Frame = 1
BLAST of CmoCh03G003350 vs. NCBI nr
Match: gi|947100971|gb|KRH49463.1| (hypothetical protein GLYMA_07G156200 [Glycine max]) HSP 1 Score: 187.2 bits (474), Expect = 6.2e-44 Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1
BLAST of CmoCh03G003350 vs. NCBI nr
Match: gi|407829661|gb|AFU35564.1| (DRE-binding protein 2D;1 [Glycine max]) HSP 1 Score: 187.2 bits (474), Expect = 6.2e-44 Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |