CmoCh03G001390 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G001390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Carboxyl-terminal peptidase
Location	Cmo_Chr03 : 1899747 .. 1903747 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCCTCTCTTCCCACAGTTCCAGCACTGGATCGGCCTGCCATTGGTGTTGGGCTTCGGCTTCATGCTCAGGTGTCCTCCTGCGATTGGTGTTGGGCTTCCTGCTCAGGTCCCATCTTTCCCAGGCGTGCGCCCATGGTACTTCCATGGCTTCTTACATGAATAACCAAGAAAAATACCATTATCCGTCTCATCTTTTTTGGCATCCTTGAGATTTTTTTGCTTGAAACAAAGATTAGATAAACTTTACATGAATAACCAAGAAAAATACCATTATCCGTGTTAGGAACAAAATTTTCCAATTTTTCTTCATTGTTCAAAATAAAACATTTGCGACAAAAAAAAATTAAATATCCAATATTTGGGAATTTGATTGTGCCAAATTCACAAGGAGTTTTATCTAAGGAGTGTTTAATTAAAACTCTATTTGGAAGCCGTATTAACGGATTCCGTCCAAAAAATATTTAGGTAAATCATACTCATTTATCGTCGATATATCAAATTCGTATAAAATACGATTTTTCTTTTCAGCCACACCATTTTTTTGAGGAGTCAGAAGTCATGAGAAAAACCATTATGTTCACAGATCTTTTCAAACACTACCCTATCAAATTCTCCCCCATAGTAAGTCCTACTAATTAAAAAAACCTTTTTCATTTTCAACTCTTCTTACAAAACTAGCAAATCTTTTTAAGACATCATTATTATGTTTTATTATCAAAACCGAAGTAAAACTCGAAAAATCATAGTAATTCCTCTCTAACTAACTATTTTAGAAGGCCAAATAAATTCATATGTAATAGTTAAAAGACGTAGAAATCACATTTTTAGATTTGAAGGAGGAATTGGTTTGTTAAGCATTTAACCATCCTCACAAATTTTATGTTTTTCAAATTTAAATTTATAAAGACCCTAAGGAATTTTGGTGAGATATTTGAAATAAGTGCATACTAGTATGTCCTAATCTTCTATGTCATAGTCACTCATGCAAAGTCACATTTATCATTGTTATCTATATTTTCAACAAACAAAACTTCCATTTTCAATTATGCAATTATTTTTATCAAATATAACTCTAAAATCTTTATCAAATTGAATAATGCTGGGTAAGTCATGCCTTAAACCATCAACTAAAGGTACACTTTCAATAAGAGTACAAATGTCATTACCTACAATACTCTCACAAATTATTCTACCCTTTATCACCAACGGTTACTAAGCCACCATCCTTCTTGAAAAATTCACAAACTTTGATTGATTTCCAGCCATGTGTATTGAGCGACCACCATGCAACAAGTACGACTTTCTTTCGAGACTTTCAAACAAACTTAAAAAAAATATTCAAAATTGGCTTTTTGATACCATGCATGTTTTTGTCCTAAACTATTATTTTCACAAATTTATGGATCCATTTCATGTTTGCATTCATACTAAAGACATTGTCTTTGTATAGGTAACAAGAATAATTTTTAATGTAATTAAAGTATTTTCGGACTTCAATAATAATTCAACTAAACAATTTCATAAATATATTCGCAGCCCACAAAAACTACCAAAAAGAATGAACCATAACCTATTCAATTCCAATTTTAAATTTAATTTTGAACTACAAACTTAAAATTAATAAAATGATGTTTTTGTTTTTTTGTTTTTTTGTTGAAAGAGCTCCAAGATGAGAGGACCCAGACTTTAAGCCACAAAAAGAATGAAAGAGTTAATTTCCATTGTTCTGTTCTTTAACCCATATATATATATATTATATGAAGAAAAAGAAGAAAGACAATCACAAAAGACAACAGACCCAAGTTTTTTTTTTTTTTTATTAAATATGGATTCTAAAACGTTCCACCGTCCTCTTCTTCCTGTTCTTGTTTTTTCCCTTCTTGTCGTTTCATCCATTTGTCGTCCCGATAAATACATCCATCCCAATAACCATACAGCGGTGTTCTGGTCGAGAATCAGTTGAAGAAACTGAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAGTTCCCTGTCAAAACCATTCAGGTCTGTAACCCTAGTTTAATCTCCTCTGTTTTGGAGCTTGATGGTTATGCTTTTATTTGGGTGCAGATTCTGGATGGCGACTTTATAGATTGTGTTGAAACTCATCTGCAGCTAACTTTTGATCATCCATTTTTCAAAGGAAAGAAACCATTGGTAAGTTCAAGGAATCTGTGGCTAAATTTTCGAAATGGGTTTTGTTTTTAACTGTGGAAATGTTGTTTCAGGATCCGCCGGAGAGACCGTATAACCAGAGCCATTCCGGTGAGGTGGAGACAGAAATGTTCCAATTATGGAGCATGTTTGGAGAATTCTGCCCAGAGGGGACAGTTCCGGTTAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAGTAAGAAGAGACTCTCTCGGCAAAGGCCATGAGGTTAGTCTTTAACCAAATTCAACTCAGCTAGCTAGTCGATATTGTTCTCTTTCGGCTTTTCCTTTTCGGGGAAGAAGTTTAACACTCTTATAAAAAGGGTGTTTCGTTCTTCTCTCAACCAATGTGGGGATCTCACAATCCACCCTCTCGGGGCCTGTTCTCTTTTGGCTTTTCCCTCTTGGGTGCAAGTCTATTAGTGAGAGGCTTCCACACCTTGATAAAGAGTGTTTCGTTTTCATCCCAACGAATGTGGGATCTCACAATCCACACTCTTGCAATCATTTCCTTCTCCAATCAAAGTGGGACCTCCCAATCTACTCCCTTCGGGGCCCCGCGTCCTACCGCCTTTGTCCACCCACTTTGGCTCTCAATCTCCTTGCTGCCACATCGCCCGGTGTCTGGCTCTGATACCAAACAGCCCAAGCCCACTGCTAGCCGATATTATCCTCTTTGGGCTTTAACCTTCCGGGCTTCTCTCAAGATTTTTAAAAAGTCTCAGCTTGTCAGAGGTTTCCACAATCTTGTAAAAGGTGTTTCGTTCTACCCGTAAAGGTGTTTCGTTCTTCTCCCTAACCGATGTTCTCCTTTCTAGCAGATGTGGGATCTCACGTCTTTTTCTCCAAAATCTGTGTCATCCCTTATAAATGTTAAGATTTTGGAGAAACCAAGATTGAAATGAATGTAAATTTTGTTGGTGCCAGTATGCAGTGGGGTTGGTAAGTGGAGGACAGTACTACGGAGCCCAGGCAAGCATGAACGTATGGAAGCCGCGGGTCAGCTATCGGAATGAGTTCAGCCTCTCACAAATGTGGCTCGTCTCCGGTTCATTCCCACATGATCTCAACACCATTGAAGCTGGGTGGCAGGCAACTTTTTAAACCGAATCAATCTTCTAGTCCATACAAATTTCAATTATATGCCTAACTTTTCTCTACAGGTTGACCCAGAGCTGTATGGAGACAACAATCCAAGATTGTTCACTTATTGGACACTAAGAATATTAAAACATAAAAATTAGCAACAAAATCGGATTGAAAATGAAATGACCGTAAGTTTTTGGATGAACAGTCCGACGCATATCAAGCAACAGGCTGCTACAATTTACTCTATCCAGGCTTCGTTCAAAACAACCGTAGAATCGCCATTGGAGCTGCAATTGCTCCAACTTCCTCCTACAATGGCGCCCAATTCGATATCAGTTTACTGGTTCGGAAGGTAACCCATTTCAATTTCATGCCTTTTCTTGAAGATTGTGAGTCCAATTTTAATTGGGGGTTGTTGTCTGTGGTTGTTCAAAAGATCCGAAGAATGGGAATTGGTGGTTGGAATTCAGGTCGGGTGTGATGGTCGGGTACTGGCCGGCGTTTTTGTTCACTCACCTTCAAAGCCACGCAACGACGATACAGTTTGGCGGAGAGGTAGTGAATTCGAGGGCGTGGGGATTTCACACGGCCACAGAAATGGGGAGTGGGCATTTCGCAGGCGAAGGATTCCAAAAAGCTTCTTATTTTCGAAATCTGAAGGTTATGAATTGGGATAA

mRNA sequence

ATGTGTCCTCTCTTCCCACAGTTCCAGCACTGGATCGGCCTGCCATTGGTGTTGGGCTTCGGCTTCATGCTCAGGTGTCCTCCTGCGATTGGTGTTGGGCTTCCTGCTCAGGTCCCATCTTTCCCAGGCGTGCGCCCATGCGGTGTTCTGGTCGAGAATCAGTTGAAGAAACTGAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAGTTCCCTGTCAAAACCATTCAGATTCTGGATGGCGACTTTATAGATTGTGTTGAAACTCATCTGCAGCTAACTTTTGATCATCCATTTTTCAAAGGAAAGAAACCATTGGATCCGCCGGAGAGACCGTATAACCAGAGCCATTCCGGTGAGGTGGAGACAGAAATGTTCCAATTATGGAGCATGTTTGGAGAATTCTGCCCAGAGGGGACAGTTCCGGTTAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAGTAAGAAGAGACTCTCTCGGCAAAGGCCATGAGTCCGACGCATATCAAGCAACAGGCTGCTACAATTTACTCTATCCAGGCTTCGTTCAAAACAACCGTAGAATCGCCATTGGAGCTGCAATTGCTCCAACTTCCTCCTACAATGGCGCCCAATTCGATATCAGTTTACTGGTTCGGAAGGTCGGGTGTGATGGTCGGGTACTGGCCGGCGTTTTTGTTCACTCACCTTCAAAGCCACGCAACGACGATACAGTTTGGCGGAGAGGTAGTGAATTCGAGGGCGTGGGGATTTCACACGGCCACAGAAATGGGGAGTGGGCATTTCGCAGGCGAAGGATTCCAAAAAGCTTCTTATTTTCGAAATCTGAAGGTTATGAATTGGGATAA

Coding sequence (CDS)

ATGTGTCCTCTCTTCCCACAGTTCCAGCACTGGATCGGCCTGCCATTGGTGTTGGGCTTCGGCTTCATGCTCAGGTGTCCTCCTGCGATTGGTGTTGGGCTTCCTGCTCAGGTCCCATCTTTCCCAGGCGTGCGCCCATGCGGTGTTCTGGTCGAGAATCAGTTGAAGAAACTGAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAGTTCCCTGTCAAAACCATTCAGATTCTGGATGGCGACTTTATAGATTGTGTTGAAACTCATCTGCAGCTAACTTTTGATCATCCATTTTTCAAAGGAAAGAAACCATTGGATCCGCCGGAGAGACCGTATAACCAGAGCCATTCCGGTGAGGTGGAGACAGAAATGTTCCAATTATGGAGCATGTTTGGAGAATTCTGCCCAGAGGGGACAGTTCCGGTTAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAGTAAGAAGAGACTCTCTCGGCAAAGGCCATGAGTCCGACGCATATCAAGCAACAGGCTGCTACAATTTACTCTATCCAGGCTTCGTTCAAAACAACCGTAGAATCGCCATTGGAGCTGCAATTGCTCCAACTTCCTCCTACAATGGCGCCCAATTCGATATCAGTTTACTGGTTCGGAAGGTCGGGTGTGATGGTCGGGTACTGGCCGGCGTTTTTGTTCACTCACCTTCAAAGCCACGCAACGACGATACAGTTTGGCGGAGAGGTAGTGAATTCGAGGGCGTGGGGATTTCACACGGCCACAGAAATGGGGAGTGGGCATTTCGCAGGCGAAGGATTCCAAAAAGCTTCTTATTTTCGAAATCTGAAGGTTATGAATTGGGATAA

Homology

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BLAST of CmoCh03G001390 vs. TrEMBL
Match: M4E734_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.4e-53
Identity = 113/193 (58.55%), Postives = 133/193 (68.91%), Query Frame = 1


Query: 52  ENQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPER 111
           +++++KLKLI+  L +INK  VKTIQ  DGD IDCV +H Q  FDHP  +G++P+DPPE 
Sbjct: 39  QHEIQKLKLIREHLQKINKPAVKTIQSPDGDIIDCVPSHHQPAFDHPMLQGQRPMDPPEM 98

Query: 112 PYNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK---VRRDS 171
           P   S   E   E FQLWS+  E CPEGT+P+RRTTE+DMLRASSV+RFGRK   VRRDS
Sbjct: 99  PKGYSQENESH-EDFQLWSLTDESCPEGTIPIRRTTEQDMLRASSVRRFGRKIRRVRRDS 158

Query: 172 LGKGHE------------------SDAYQATGCYNLLYPGFVQNNRRIAIGAAIAPTSSY 224
              GHE                  SDAYQATGCYNLL  GF+Q N RIAIGAAI+P SSY
Sbjct: 159 SSNGHEVSPELYGDTNPRFFTYWTSDAYQATGCYNLLCSGFIQTNNRIAIGAAISPVSSY 218

[Close]

BLAST of CmoCh03G001390 vs. TrEMBL
Match: A0A068UXH6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038065001 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.3e-52
Identity = 114/195 (58.46%), Postives = 131/195 (67.18%), Query Frame = 1


Query: 56  KKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPERPYNQ 115
           +KLK I+A L ++NK  VKTIQ  DGD IDCV +H Q  FDH   KGKKPLDPPERP   
Sbjct: 46  QKLKTIRAHLTKVNKPAVKTIQSPDGDTIDCVLSHHQPAFDHAKLKGKKPLDPPERPKGH 105

Query: 116 SHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK----VRRDSLGK 175
             +G +  E FQLWSM GE CPEGTVP+RRT+E+D+LRA+S+ RF RK    +RRD+   
Sbjct: 106 DTTG-ILPEEFQLWSMSGESCPEGTVPIRRTSEQDILRANSIGRFARKLRRPIRRDTTSN 165

Query: 176 GHE-----------------------SDAYQATGCYNLLYPGFVQNNRRIAIGAAIAPTS 224
           GHE                       SDAYQATGCYNLL  GFVQ N RIAIGAAI+PTS
Sbjct: 166 GHEHAVGYVSPELYGDNYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTS 225

[Close]

BLAST of CmoCh03G001390 vs. TrEMBL
Match: M4DIM4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-51
Identity = 113/217 (52.07%), Postives = 134/217 (61.75%), Query Frame = 1


Query: 52  ENQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPER 111
           +++++KLKLI+  L +INK  +KTIQ  DGD IDCV +H Q  FDHP  +G++P+DPPE 
Sbjct: 39  QHEIQKLKLIREHLQKINKPAIKTIQSSDGDIIDCVPSHHQPAFDHPLLQGQRPMDPPEM 98

Query: 112 PYNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK---VRRDS 171
           P  QS   E   E FQLWS+ GEFCPEGT+P+RRTTE+DM RASSV +FGRK   VRRDS
Sbjct: 99  PKGQSQENE-SHEDFQLWSLTGEFCPEGTIPIRRTTEQDMFRASSVLKFGRKIRRVRRDS 158

Query: 172 LGKGHE------------------------------------------SDAYQATGCYNL 224
              GHE                                          SDAYQATGCYNL
Sbjct: 159 SSNGHEHAVGYVSGSKYYGAKANVNVWTPHVSPELYGDTNPRFFTYWTSDAYQATGCYNL 218

[Close]

BLAST of CmoCh03G001390 vs. TrEMBL
Match: A0A078DQV6_BRANA (BnaC08g06290D protein OS=Brassica napus GN=BnaC08g06290D PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.1e-51
Identity = 114/218 (52.29%), Postives = 138/218 (63.30%), Query Frame = 1


Query: 52  ENQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPER 111
           +++++KLKLI+  L +INK  +KTIQ  DGD IDCV +H Q  FDHP  +G++P+DPPE 
Sbjct: 39  QHEIQKLKLIREHLPKINKPAIKTIQSSDGDIIDCVPSHHQPAFDHPLLQGQRPMDPPEM 98

Query: 112 PYNQSHSGEVET-EMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK---VRRD 171
           P  + H  E E+ E FQLWS+ GEFCPEGT+P+RRTTE+DMLRASSV++FGRK   VRRD
Sbjct: 99  P--KGHCQENESHEDFQLWSLTGEFCPEGTIPIRRTTEQDMLRASSVRKFGRKIRRVRRD 158

Query: 172 SLGKGHE------------------------------------------SDAYQATGCYN 224
           S   GHE                                          SDAYQATGCYN
Sbjct: 159 SSSNGHEHAVGYVSGSKYYGAKASVNVWTPHVSPELYGDTNPRFFTYWTSDAYQATGCYN 218

[Close]

BLAST of CmoCh03G001390 vs. TrEMBL
Match: A0A0B2RMH3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016663 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47
Identity = 117/233 (50.21%), Postives = 136/233 (58.37%), Query Frame = 1


Query: 44  VRPCGVLVENQLKKLKLIQADLNRINKFPVKTIQIL--------DGDFIDCVETHLQLTF 103
           +RP  VL     +KL+ I+  L++INK  VKTI+          DGD IDCV +H Q  F
Sbjct: 112 LRPAAVL-----QKLRRIRTHLDKINKPAVKTIKAFSFALLSSPDGDLIDCVLSHQQPAF 171

Query: 104 DHPFFKGKKPLDPPERPYNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRAS 163
           DHP  KG++PLDPPERP   ++ GE   E FQLW+  GE CPEGTVP+RRTTE+D LRAS
Sbjct: 172 DHPQLKGQRPLDPPERPKGHTN-GETVVESFQLWTDSGEACPEGTVPIRRTTEQDFLRAS 231

Query: 164 SVQRFGRK---VRRDSLGKGHE-------------------------------------- 223
           SV+RFGRK   VRRDS G GHE                                      
Sbjct: 232 SVRRFGRKPRNVRRDSTGIGHEHAVVSVNGDQYFGAKASINVWTPSVSPELYGDNYPRFF 291

[Close]

BLAST of CmoCh03G001390 vs. TAIR10
Match: AT1G70550.1 (AT1G70550.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 79/134 (58.96%), Postives = 94/134 (70.15%), Query Frame = 1


Query: 52  ENQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPER 111
           + +L+KL LI+ +L++INK  VKTIQ  DGD IDCV TH Q  FDHP  +G+KPLDPPE 
Sbjct: 94  QEELQKLTLIRQELDKINKPAVKTIQSSDGDKIDCVSTHQQPAFDHPLLQGQKPLDPPEI 153

Query: 112 PYNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRKVR---RDS 171
           P   S   +   E  QLWS+ GE CPEGT+P+RRTTE+DMLRASSVQRFGRK+R   RDS
Sbjct: 154 PKGYSED-DGSYENSQLWSLSGESCPEGTIPIRRTTEQDMLRASSVQRFGRKIRRVKRDS 213

Query: 172 LGKGHESDAYQATG 183
              GHE      TG
Sbjct: 214 TNNGHEHAVGYVTG 226

[Close]

BLAST of CmoCh03G001390 vs. TAIR10
Match: AT1G23340.1 (AT1G23340.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 151.4 bits (381), Expect = 8.8e-37
Identity = 72/126 (57.14%), Postives = 92/126 (73.02%), Query Frame = 1


Query: 52  ENQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPER 111
           + +++K+KLI+  L +INK  +KTI   DGD IDCV +H Q  FDHP  +G++P+DPPE 
Sbjct: 38  QREIQKMKLIRKQLQKINKPAIKTIHSSDGDTIDCVPSHHQPAFDHPLLQGQRPMDPPEM 97

Query: 112 PYNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK---VRRDS 171
           P   S   E   E FQLWS++GE CPEGT+P+RRTTE+DMLRA+SV+RFGRK   VRRDS
Sbjct: 98  PIGYSQENESH-ENFQLWSLYGESCPEGTIPIRRTTEQDMLRANSVRRFGRKIRRVRRDS 157

Query: 172 LGKGHE 175
              GHE
Sbjct: 158 SSNGHE 162

[Close]

BLAST of CmoCh03G001390 vs. TAIR10
Match: AT1G10750.1 (AT1G10750.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 138.3 bits (347), Expect = 7.7e-33
Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 1


Query: 53  NQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPERP 112
           ++L KLK I   L +INK  +KTI   DGD IDCV  H Q  FDHP  +G+KPLDPPERP
Sbjct: 97  DELNKLKAINQHLRKINKPSIKTIHSPDGDIIDCVLLHHQPAFDHPSLRGQKPLDPPERP 156

Query: 113 YNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRKV---RRDSL 172
              +  G +  + FQLW M GE CPEGTVP+RRT E+D+LRA+SV  FG+K+   RRD+ 
Sbjct: 157 RGHNRRG-LRPKSFQLWGMEGETCPEGTVPIRRTKEEDILRANSVSSFGKKLRHYRRDTS 216

Query: 173 GKGHE 175
             GHE
Sbjct: 217 SNGHE 220

[Close]

BLAST of CmoCh03G001390 vs. TAIR10
Match: AT5G50150.1 (AT5G50150.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 132.5 bits (332), Expect = 4.2e-31
Identity = 65/125 (52.00%), Postives = 90/125 (72.00%), Query Frame = 1


Query: 54  QLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPERPY 113
           +++KL+ ++A L++INK  +KTI   DGD I+CV +HLQ  FDHP  +G+KPLD P RP 
Sbjct: 50  EIQKLRRVEAYLSKINKPSIKTIHSPDGDVIECVPSHLQPAFDHPQLQGQKPLDSPYRP- 109

Query: 114 NQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK----VRRDSL 173
           ++ +    E    QLWSM GE CP G++P+R+TT+ D+LRA+SV+RFGRK    +RRDS 
Sbjct: 110 SKGNETTYEESFNQLWSMSGESCPIGSIPIRKTTKNDVLRANSVRRFGRKLRRPIRRDSS 169

Query: 174 GKGHE 175
           G GHE
Sbjct: 170 GGGHE 173

[Close]

BLAST of CmoCh03G001390 vs. TAIR10
Match: AT3G13510.1 (AT3G13510.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-21
Identity = 58/131 (44.27%), Postives = 74/131 (56.49%), Query Frame = 1


Query: 61  IQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKK-PLDPPERPYNQSHSG 120
           ++  LNR+NK PVKTIQ  DGD IDC+    Q  FDHPF K  K  + P   P       
Sbjct: 41  VKKHLNRLNKPPVKTIQSPDGDIIDCIPISKQPAFDHPFLKDHKIQMRPSYHPEGLFDDN 100

Query: 121 EV-------ETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRKVRRD-SLGK 180
           +V       ET + QLW  +G+ C EGT+P+RRT E D+LRASSV+R+G+K  R   + K
Sbjct: 101 KVSAEPKGKETHIPQLWHRYGK-CTEGTIPMRRTREDDVLRASSVKRYGKKKHRSVPIPK 160

Query: 181 GHESDAYQATG 183
             E D     G
Sbjct: 161 SAEPDLINQNG 170

[Close]

BLAST of CmoCh03G001390 vs. NCBI nr
Match: gi|661882992|emb|CDP13200.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 114/195 (58.46%), Postives = 131/195 (67.18%), Query Frame = 1


Query: 56  KKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPERPYNQ 115
           +KLK I+A L ++NK  VKTIQ  DGD IDCV +H Q  FDH   KGKKPLDPPERP   
Sbjct: 46  QKLKTIRAHLTKVNKPAVKTIQSPDGDTIDCVLSHHQPAFDHAKLKGKKPLDPPERPKGH 105

Query: 116 SHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK----VRRDSLGK 175
             +G +  E FQLWSM GE CPEGTVP+RRT+E+D+LRA+S+ RF RK    +RRD+   
Sbjct: 106 DTTG-ILPEEFQLWSMSGESCPEGTVPIRRTSEQDILRANSIGRFARKLRRPIRRDTTSN 165

Query: 176 GHE-----------------------SDAYQATGCYNLLYPGFVQNNRRIAIGAAIAPTS 224
           GHE                       SDAYQATGCYNLL  GFVQ N RIAIGAAI+PTS
Sbjct: 166 GHEHAVGYVSPELYGDNYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTS 225

[Close]

BLAST of CmoCh03G001390 vs. NCBI nr
Match: gi|674941675|emb|CDX91710.1| (BnaC08g06290D [Brassica napus])

HSP 1 Score: 210.3 bits (534), Expect = 4.5e-51
Identity = 114/218 (52.29%), Postives = 138/218 (63.30%), Query Frame = 1


Query: 52  ENQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPER 111
           +++++KLKLI+  L +INK  +KTIQ  DGD IDCV +H Q  FDHP  +G++P+DPPE 
Sbjct: 39  QHEIQKLKLIREHLPKINKPAIKTIQSSDGDIIDCVPSHHQPAFDHPLLQGQRPMDPPEM 98

Query: 112 PYNQSHSGEVET-EMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK---VRRD 171
           P  + H  E E+ E FQLWS+ GEFCPEGT+P+RRTTE+DMLRASSV++FGRK   VRRD
Sbjct: 99  P--KGHCQENESHEDFQLWSLTGEFCPEGTIPIRRTTEQDMLRASSVRKFGRKIRRVRRD 158

Query: 172 SLGKGHE------------------------------------------SDAYQATGCYN 224
           S   GHE                                          SDAYQATGCYN
Sbjct: 159 SSSNGHEHAVGYVSGSKYYGAKASVNVWTPHVSPELYGDTNPRFFTYWTSDAYQATGCYN 218

[Close]

BLAST of CmoCh03G001390 vs. NCBI nr
Match: gi|734407529|gb|KHN34335.1| (hypothetical protein glysoja_016663 [Glycine soja])

HSP 1 Score: 198.4 bits (503), Expect = 1.8e-47
Identity = 117/233 (50.21%), Postives = 136/233 (58.37%), Query Frame = 1


Query: 44  VRPCGVLVENQLKKLKLIQADLNRINKFPVKTIQIL--------DGDFIDCVETHLQLTF 103
           +RP  VL     +KL+ I+  L++INK  VKTI+          DGD IDCV +H Q  F
Sbjct: 112 LRPAAVL-----QKLRRIRTHLDKINKPAVKTIKAFSFALLSSPDGDLIDCVLSHQQPAF 171

Query: 104 DHPFFKGKKPLDPPERPYNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRAS 163
           DHP  KG++PLDPPERP   ++ GE   E FQLW+  GE CPEGTVP+RRTTE+D LRAS
Sbjct: 172 DHPQLKGQRPLDPPERPKGHTN-GETVVESFQLWTDSGEACPEGTVPIRRTTEQDFLRAS 231

Query: 164 SVQRFGRK---VRRDSLGKGHE-------------------------------------- 223
           SV+RFGRK   VRRDS G GHE                                      
Sbjct: 232 SVRRFGRKPRNVRRDSTGIGHEHAVVSVNGDQYFGAKASINVWTPSVSPELYGDNYPRFF 291

[Close]

BLAST of CmoCh03G001390 vs. NCBI nr
Match: gi|734399566|gb|KHN30932.1| (hypothetical protein glysoja_017469 [Glycine soja])

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43
Identity = 97/167 (58.08%), Postives = 111/167 (66.47%), Query Frame = 1


Query: 80  DGDFIDCVETHLQLTFDHPFFKGKKPLDPPERPYNQSHSGEVET--EMFQLWSMFGEFCP 139
           DGD IDCV +H Q  FDHP  +G   LDPPERP     +GE E   E FQLWS  GE CP
Sbjct: 110 DGDLIDCVLSHQQHAFDHPKLRGHIVLDPPERPKGNHTNGEAERVIESFQLWSDSGEACP 169

Query: 140 EGTVPVRRTTEKDMLRASSVQRFGRK---VRRDSLGKGHE------------------SD 199
           EGTVP+RRTTE+D+LRASS+QRFGRK   VRRDS G GHE                  +D
Sbjct: 170 EGTVPIRRTTEEDILRASSIQRFGRKPRPVRRDSTGSGHEVSPQLYGDNYPRFFTYWTTD 229

Query: 200 AYQATGCYNLLYPGFVQNNRRIAIGAAIAPTSSYNGAQFDISLLVRK 224
           AYQ TGCYNLL  GF+Q N RIAIGAAI+P S++N  QFDI L++ K
Sbjct: 230 AYQTTGCYNLLCSGFIQINNRIAIGAAISPRSAFNRRQFDIGLMIWK 276

[Close]

BLAST of CmoCh03G001390 vs. NCBI nr
Match: gi|734334595|gb|KHN07853.1| (hypothetical protein glysoja_046589 [Glycine soja])

HSP 1 Score: 181.4 bits (459), Expect = 2.2e-42
Identity = 103/218 (47.25%), Postives = 126/218 (57.80%), Query Frame = 1


Query: 52  ENQLKKLKLIQADLNRINKFPVKTIQILDGDFIDCVETHLQLTFDHPFFKGKKPLDPPER 111
           + +L KL  I+  L  INK PVKTIQ   GD IDCV +H+Q  FDHP  KG+KPLDPPER
Sbjct: 92  KEELHKLNAIRNRLQLINKPPVKTIQSSYGDIIDCVASHMQHAFDHPQLKGQKPLDPPER 151

Query: 112 PYNQSHSGEVETEMFQLWSMFGEFCPEGTVPVRRTTEKDMLRASSVQRFGRK-----VRR 171
           P   +   +  ++ FQLW++ GE CPEGT+P+RRTTE+DMLRA+SV+RFGRK     VRR
Sbjct: 152 PRGHNQMDDDLSDSFQLWNLSGESCPEGTIPIRRTTEEDMLRANSVRRFGRKKVINRVRR 211

Query: 172 DSLGKGHE--------SDAYQATGCYNLLYP----------------------------- 224
           D+ G GHE           Y A    N+  P                             
Sbjct: 212 DTSGNGHEHAIGYVTGDQYYGAKASINVWAPLVENPYEFSLSQMWVISGSFGDDLNTIEA 271

The following BLAST results are available for this feature:

BLAST of CmoCh03G001390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh03G001390 vs. TrEMBL


Match Name	E-value	Identity	Description
M4E734_BRARP	3.4e-53	58.55	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A068UXH6_COFCA	8.3e-52	58.46	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038065001 PE=4 SV=1	[more]
M4DIM4_BRARP	1.1e-51	52.07	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078DQV6_BRANA	3.1e-51	52.29	BnaC08g06290D protein OS=Brassica napus GN=BnaC08g06290D PE=4 SV=1	[more]
A0A0B2RMH3_GLYSO	1.2e-47	50.21	Uncharacterized protein OS=Glycine soja GN=glysoja_016663 PE=4 SV=1	[more]

BLAST of CmoCh03G001390 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70550.1	1.4e-37	58.96	Protein of Unknown Function (DUF239)	[more]
AT1G23340.1	8.8e-37	57.14	Protein of Unknown Function (DUF239)	[more]
AT1G10750.1	7.7e-33	55.20	Protein of Unknown Function (DUF239)	[more]
AT5G50150.1	4.2e-31	52.00	Protein of Unknown Function (DUF239)	[more]
AT3G13510.1	3.0e-21	44.27	Protein of Unknown Function (DUF239)	[more]

BLAST of CmoCh03G001390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|661882992\|emb\|CDP13200.1\|	1.2e-51	58.46	unnamed protein product [Coffea canephora]	[more]
gi\|674941675\|emb\|CDX91710.1\|	4.5e-51	52.29	BnaC08g06290D [Brassica napus]	[more]
gi\|734407529\|gb\|KHN34335.1\|	1.8e-47	50.21	hypothetical protein glysoja_016663 [Glycine soja]	[more]
gi\|734399566\|gb\|KHN30932.1\|	2.6e-43	58.08	hypothetical protein glysoja_017469 [Glycine soja]	[more]
gi\|734334595\|gb\|KHN07853.1\|	2.2e-42	47.25	hypothetical protein glysoja_046589 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004314	Neprosin
IPR025521	Neprosin_propep

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G001390.1	CmoCh03G001390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004314	Domain of unknown function DUF239	PFAM	PF03080	DUF239	coord: 175..223 score: 3.4
IPR025521	Domain of unknown function DUF4409	PFAM	PF14365	DUF4409	coord: 75..166 score: 1.0
None	No IPR available	PANTHER	PTHR31589	FAMILY NOT NAMED	coord: 52..223 score: 1.4
None	No IPR available	PANTHER	PTHR31589:SF3	SUBFAMILY NOT NAMED	coord: 52..223 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G001390	Cucumber (Chinese Long) v3	cmocucB0782
CmoCh03G001390	Watermelon (97103) v2	cmowmbB658
CmoCh03G001390	Wax gourd	cmowgoB0788
CmoCh03G001390	Cucurbita moschata (Rifu)	cmocmoB461
CmoCh03G001390	Cucumber (Gy14) v1	cgycmoB0937
CmoCh03G001390	Cucumber (Gy14) v1	cgycmoB0974
CmoCh03G001390	Cucurbita maxima (Rimu)	cmacmoB654
CmoCh03G001390	Cucurbita maxima (Rimu)	cmacmoB863
CmoCh03G001390	Wild cucumber (PI 183967)	cmocpiB670
CmoCh03G001390	Cucumber (Chinese Long) v2	cmocuB658
CmoCh03G001390	Melon (DHL92) v3.5.1	cmomeB601
CmoCh03G001390	Watermelon (Charleston Gray)	cmowcgB585
CmoCh03G001390	Watermelon (97103) v1	cmowmB628
CmoCh03G001390	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G001390	Cucurbita pepo (Zucchini)	cmocpeB620
CmoCh03G001390	Bottle gourd (USVL1VR-Ls)	cmolsiB583
CmoCh03G001390	Cucumber (Gy14) v2	cgybcmoB508
CmoCh03G001390	Melon (DHL92) v3.6.1	cmomedB689
CmoCh03G001390	Silver-seed gourd	carcmoB0394