CmoCh03G001150 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G001150
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBeta-galactosidase (3.2.1.23)
LocationCmo_Chr03 : 1601118 .. 1601430 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAACGATGCATTATCTTCCCGAGTTCAATTTAATATCCACGCGCACCGAAGAGATGTGACCCTATCTTATTCAAAAAGTTAAAGATGGTGGATTTGATGTGATAGAGACATACATTTTTTGGGATCCTCATGAGTCTCAACGATGAAAATATGATTTCTCTGGACGTCTAAATTTTATCAAGTTCTTCGAGCGTCTCCAAGAGGCTAGACTTCATGTTGTCATGATGATTGGTCCTTATGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCACTATGGTTGCACAATATGCCGAGAATCCAACTATGA

mRNA sequence

ATGGTGAACGATGCATTATCTTCCCGAGTTCAATTTAATATCCACGCGCACCGAAGAGATAGACATACATTTTTTGGGATCCTCATGAGTCTCAACGATGAAAATATGATTTCTCTGGACTTCTTCGAGCGTCTCCAAGAGGCTAGACTTCATGTTGTCATGATGATTGGTCCTTATGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCACTATGGTTGCACAATATGCCGAGAATCCAACTATGA

Coding sequence (CDS)

ATGGTGAACGATGCATTATCTTCCCGAGTTCAATTTAATATCCACGCGCACCGAAGAGATAGACATACATTTTTTGGGATCCTCATGAGTCTCAACGATGAAAATATGATTTCTCTGGACTTCTTCGAGCGTCTCCAAGAGGCTAGACTTCATGTTGTCATGATGATTGGTCCTTATGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCACTATGGTTGCACAATATGCCGAGAATCCAACTATGA
Homology
[Close]
BLAST of CmoCh03G001150 vs. Swiss-Prot
Match: BGAL7_ARATH (Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-14
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + V +N H  +R  + F G        N+  + F + +Q+A L+ V+ IGPYVCAE
Sbjct: 72  DAIETYVFWNAHEPKRREYDFSG--------NLDVVRFIKTIQDAGLYSVLRIGPYVCAE 131

Query: 64  WNYGGFPLWLHNMPRIQ 81
           WNYGGFP+WLHNMP ++
Sbjct: 132 WNYGGFPVWLHNMPNMK 140

[Close]
BLAST of CmoCh03G001150 vs. Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 8.8e-13
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           D + + V +N H   R ++ F G        N+  + F + +Q A L+ V+ IGPYVCAE
Sbjct: 71  DTIETYVFWNAHEPSRRQYDFSG--------NLDLVRFIKTIQSAGLYSVLRIGPYVCAE 130

Query: 64  WNYGGFPLWLHNMP 78
           WNYGGFP+WLHNMP
Sbjct: 131 WNYGGFPVWLHNMP 136

[Close]
BLAST of CmoCh03G001150 vs. Swiss-Prot
Match: BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 8.8e-13
Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + V +N H   R ++ F G        N+  + F + +Q   ++ V+ IGPYVCAE
Sbjct: 66  DAIETYVFWNAHEPTRRQYDFSG--------NLDLIRFLKTIQNEGMYGVLRIGPYVCAE 125

Query: 64  WNYGGFPLWLHNMPRIQ 81
           WNYGGFP+WLHNMP ++
Sbjct: 126 WNYGGFPVWLHNMPGME 134

[Close]
BLAST of CmoCh03G001150 vs. Swiss-Prot
Match: BGA13_ORYSJ (Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-11
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + V +N H   R ++ F G        N   + FF+ +Q A L+ ++ IGPY+C E
Sbjct: 75  DAIETYVFWNGHEPHRRQYNFEG--------NYDIIRFFKEIQNAGLYAILRIGPYICGE 134

Query: 64  WNYGGFPLWLHNMPRIQ 81
           WNYGG P WL ++P++Q
Sbjct: 135 WNYGGLPAWLRDIPQMQ 143

[Close]
BLAST of CmoCh03G001150 vs. Swiss-Prot
Match: BGA10_ORYSJ (Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.8e-11
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + V +N H   R ++ F G        N   + FF+ +Q A L+ ++ IGPY+C E
Sbjct: 75  DAIETYVFWNGHEPHRRQYNFVG--------NYDIVRFFKEIQNAGLYAILRIGPYICGE 134

Query: 64  WNYGGFPLWLHNMPRIQ 81
           WNYGG P WL ++P +Q
Sbjct: 135 WNYGGLPAWLRDIPGMQ 143

[Close]
BLAST of CmoCh03G001150 vs. TrEMBL
Match: A0A0A0LXX7_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-14
Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + ++ H  +R ++ F G L      N I   FF+ +Q+A L++VM IGPYVCAE
Sbjct: 49  DAIETYIFWDRHEPQRQKYDFSGHL------NFIK--FFQLVQDAGLYIVMRIGPYVCAE 108

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFPLWLHNMP IQL
Sbjct: 109 WNYGGFPLWLHNMPGIQL 118

[Close]
BLAST of CmoCh03G001150 vs. TrEMBL
Match: A0A0A0LDH9_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-14
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + ++ H   R ++ F G L      N I   +F+ +QEA L+VVM IGPYVCAE
Sbjct: 71  DAIETYIFWDRHEPHRRKYDFSGHL------NFIK--YFQLIQEAGLYVVMRIGPYVCAE 130

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFPLWLHNMP IQL
Sbjct: 131 WNYGGFPLWLHNMPGIQL 140

[Close]
BLAST of CmoCh03G001150 vs. TrEMBL
Match: A0A067G2I2_CITSI (Beta-galactosidase (Fragment) OS=Citrus sinensis GN=CISIN_1g0393481mg PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.5e-14
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + +N+H  RR  + F G        N+  + FF+ +Q+A L+ ++ IGPYVCAE
Sbjct: 69  DAIETYIFWNVHEPRRREYDFSG--------NLDFVKFFKLVQDAGLYAILRIGPYVCAE 128

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFP+WLHN P IQL
Sbjct: 129 WNYGGFPMWLHNTPGIQL 138

[Close]
BLAST of CmoCh03G001150 vs. TrEMBL
Match: V4WHB4_9ROSI (Beta-galactosidase OS=Citrus clementina GN=CICLE_v10010771mg PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.5e-14
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + +N+H  RR  + F G        N+  + FF+ +Q+A L+ ++ IGPYVCAE
Sbjct: 69  DAIETYIFWNVHEPRRREYDFSG--------NLDFVKFFKLVQDAGLYAILRIGPYVCAE 128

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFP+WLHN P IQL
Sbjct: 129 WNYGGFPMWLHNTPGIQL 138

[Close]
BLAST of CmoCh03G001150 vs. TrEMBL
Match: A0A0A0KRM6_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-13
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + ++ H  +R ++ F G L  +         FF+ +Q+A L+VVM IGPYVCAE
Sbjct: 66  DAIETYIFWDRHEPQRRKYDFSGRLDFIK--------FFQLIQDAGLYVVMRIGPYVCAE 125

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFP+WLHNMP IQL
Sbjct: 126 WNYGGFPVWLHNMPGIQL 135

[Close]
BLAST of CmoCh03G001150 vs. TAIR10
Match: AT5G20710.1 (AT5G20710.1 beta-galactosidase 7)

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-15
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + V +N H  +R  + F G        N+  + F + +Q+A L+ V+ IGPYVCAE
Sbjct: 72  DAIETYVFWNAHEPKRREYDFSG--------NLDVVRFIKTIQDAGLYSVLRIGPYVCAE 131

Query: 64  WNYGGFPLWLHNMPRIQ 81
           WNYGGFP+WLHNMP ++
Sbjct: 132 WNYGGFPVWLHNMPNMK 140

[Close]
BLAST of CmoCh03G001150 vs. TAIR10
Match: AT1G31740.1 (AT1G31740.1 beta-galactosidase 15)

HSP 1 Score: 73.9 bits (180), Expect = 5.0e-14
Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + V +N H   R ++ F G        N+  + F + +Q   ++ V+ IGPYVCAE
Sbjct: 89  DAIETYVFWNAHEPTRRQYDFSG--------NLDLIRFLKTIQNEGMYGVLRIGPYVCAE 148

Query: 64  WNYGGFPLWLHNMPRIQ 81
           WNYGGFP+WLHNMP ++
Sbjct: 149 WNYGGFPVWLHNMPGME 157

[Close]
BLAST of CmoCh03G001150 vs. TAIR10
Match: AT2G28470.1 (AT2G28470.1 beta-galactosidase 8)

HSP 1 Score: 61.2 bits (147), Expect = 3.3e-10
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           D + + V ++ H   ++++ F G            + F +   +A L+V + IGPYVCAE
Sbjct: 76  DVIETYVFWSGHEPEKNKYNFEG--------RYDLVKFVKLAAKAGLYVHLRIGPYVCAE 135

Query: 64  WNYGGFPLWLHNMPRIQ 81
           WNYGGFP+WLH +P I+
Sbjct: 136 WNYGGFPVWLHFVPGIK 144

[Close]
BLAST of CmoCh03G001150 vs. TAIR10
Match: AT4G36360.1 (AT4G36360.1 beta-galactosidase 3)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-09
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           D + + V +N+H     ++ F G     ND     + F + + +A L+  + IGPYVCAE
Sbjct: 77  DVIETYVFWNLHEPSPGKYDFEG----RND----LVRFVKTIHKAGLYAHLRIGPYVCAE 136

Query: 64  WNYGGFPLWLHNMPRI 80
           WN+GGFP+WL  +P I
Sbjct: 137 WNFGGFPVWLKYVPGI 144

[Close]
BLAST of CmoCh03G001150 vs. TAIR10
Match: AT5G63810.1 (AT5G63810.1 beta-galactosidase 10)

HSP 1 Score: 57.8 bits (138), Expect = 3.7e-09
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           +A+ S V +N H     ++ F G        N++   F + +Q+A +H+++ IGP+V AE
Sbjct: 76  NAIESYVFWNGHEPSPGKYYFGGRY------NIVK--FIKIVQQAGMHMILRIGPFVAAE 135

Query: 64  WNYGGFPLWLHNMP 78
           WNYGG P+WLH +P
Sbjct: 136 WNYGGVPVWLHYVP 141

[Close]
BLAST of CmoCh03G001150 vs. NCBI nr
Match: gi|985443535|ref|XP_015384615.1| (PREDICTED: beta-galactosidase 7-like [Citrus sinensis])

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + +N+H  RR  + F G        N+  + FF+ +Q+A LH ++ IGPYVCAE
Sbjct: 54  DAIETYIFWNVHEPRRREYDFSG--------NLDFVKFFKLVQDAGLHAILRIGPYVCAE 113

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFP+WLHN P IQL
Sbjct: 114 WNYGGFPMWLHNTPGIQL 123

[Close]
BLAST of CmoCh03G001150 vs. NCBI nr
Match: gi|778665388|ref|XP_004139151.2| (PREDICTED: beta-galactosidase 7-like [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-14
Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + ++ H  +R ++ F G L      N I   FF+ +Q+A L++VM IGPYVCAE
Sbjct: 49  DAIETYIFWDRHEPQRQKYDFSGHL------NFIK--FFQLVQDAGLYIVMRIGPYVCAE 108

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFPLWLHNMP IQL
Sbjct: 109 WNYGGFPLWLHNMPGIQL 118

[Close]
BLAST of CmoCh03G001150 vs. NCBI nr
Match: gi|778688671|ref|XP_011652808.1| (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 6.1e-14
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + ++ H   R ++ F G L      N I   +F+ +QEA L+VVM IGPYVCAE
Sbjct: 71  DAIETYIFWDRHEPHRRKYDFSGHL------NFIK--YFQLIQEAGLYVVMRIGPYVCAE 130

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFPLWLHNMP IQL
Sbjct: 131 WNYGGFPLWLHNMPGIQL 140

[Close]
BLAST of CmoCh03G001150 vs. NCBI nr
Match: gi|700203008|gb|KGN58141.1| (hypothetical protein Csa_3G550690 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 6.1e-14
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + ++ H   R ++ F G L      N I   +F+ +QEA L+VVM IGPYVCAE
Sbjct: 71  DAIETYIFWDRHEPHRRKYDFSGHL------NFIK--YFQLIQEAGLYVVMRIGPYVCAE 130

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFPLWLHNMP IQL
Sbjct: 131 WNYGGFPLWLHNMPGIQL 140

[Close]
BLAST of CmoCh03G001150 vs. NCBI nr
Match: gi|641855045|gb|KDO73839.1| (hypothetical protein CISIN_1g0393481mg, partial [Citrus sinensis])

HSP 1 Score: 84.7 bits (208), Expect = 8.0e-14
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 4   DALSSRVQFNIHAHRRDRHTFFGILMSLNDENMISLDFFERLQEARLHVVMMIGPYVCAE 63
           DA+ + + +N+H  RR  + F G        N+  + FF+ +Q+A L+ ++ IGPYVCAE
Sbjct: 69  DAIETYIFWNVHEPRRREYDFSG--------NLDFVKFFKLVQDAGLYAILRIGPYVCAE 128

Query: 64  WNYGGFPLWLHNMPRIQL 82
           WNYGGFP+WLHN P IQL
Sbjct: 129 WNYGGFPMWLHNTPGIQL 138

The following BLAST results are available for this feature:
BLAST of CmoCh03G001150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BGAL7_ARATH3.6e-1445.45Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2[more]
BGAL_BRAOL8.8e-1345.95Beta-galactosidase OS=Brassica oleracea PE=2 SV=1[more]
BGA15_ARATH8.8e-1342.86Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1[more]
BGA13_ORYSJ2.8e-1138.96Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1[more]
BGA10_ORYSJ4.8e-1138.96Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 P... [more]
BLAST of CmoCh03G001150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXX7_CUCSA3.2e-1452.56Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1[more]
A0A0A0LDH9_CUCSA4.2e-1453.85Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1[more]
A0A067G2I2_CITSI5.5e-1447.44Beta-galactosidase (Fragment) OS=Citrus sinensis GN=CISIN_1g0393481mg PE=3 SV=1[more]
V4WHB4_9ROSI5.5e-1447.44Beta-galactosidase OS=Citrus clementina GN=CICLE_v10010771mg PE=3 SV=1[more]
A0A0A0KRM6_CUCSA1.2e-1350.00Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1[more]
BLAST of CmoCh03G001150 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20710.12.0e-1545.45 beta-galactosidase 7[more]
AT1G31740.15.0e-1442.86 beta-galactosidase 15[more]
AT2G28470.13.3e-1037.66 beta-galactosidase 8[more]
AT4G36360.12.2e-0938.16 beta-galactosidase 3[more]
AT5G63810.13.7e-0937.84 beta-galactosidase 10[more]
BLAST of CmoCh03G001150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|985443535|ref|XP_015384615.1|1.6e-1448.72PREDICTED: beta-galactosidase 7-like [Citrus sinensis][more]
gi|778665388|ref|XP_004139151.2|4.7e-1452.56PREDICTED: beta-galactosidase 7-like [Cucumis sativus][more]
gi|778688671|ref|XP_011652808.1|6.1e-1453.85PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus][more]
gi|700203008|gb|KGN58141.1|6.1e-1453.85hypothetical protein Csa_3G550690 [Cucumis sativus][more]
gi|641855045|gb|KDO73839.1|8.0e-1447.44hypothetical protein CISIN_1g0393481mg, partial [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001944Glycoside_Hdrlase_35
IPR013781Glycoside hydrolase, catalytic domain
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G001150.1CmoCh03G001150.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001944Glycoside hydrolase, family 35PANTHERPTHR23421BETA-GALACTOSIDASE RELATEDcoord: 4..81
score: 9.1
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 7..80
score: 1.1
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 40..77
score: 1.4
NoneNo IPR availablePANTHERPTHR23421:SF80SUBFAMILY NOT NAMEDcoord: 4..81
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G001150Silver-seed gourdcarcmoB0394
CmoCh03G001150Silver-seed gourdcarcmoB1158
CmoCh03G001150Cucumber (Chinese Long) v3cmocucB0782
CmoCh03G001150Watermelon (97103) v2cmowmbB658
CmoCh03G001150Wax gourdcmowgoB0788
CmoCh03G001150Cucurbita moschata (Rifu)cmocmoB461
CmoCh03G001150Cucumber (Gy14) v1cgycmoB0974
CmoCh03G001150Cucurbita maxima (Rimu)cmacmoB654
CmoCh03G001150Cucurbita maxima (Rimu)cmacmoB863
CmoCh03G001150Wild cucumber (PI 183967)cmocpiB670
CmoCh03G001150Cucumber (Chinese Long) v2cmocuB658
CmoCh03G001150Melon (DHL92) v3.5.1cmomeB601
CmoCh03G001150Melon (DHL92) v3.5.1cmomeB610
CmoCh03G001150Watermelon (Charleston Gray)cmowcgB585
CmoCh03G001150Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G001150Cucurbita pepo (Zucchini)cmocpeB620
CmoCh03G001150Bottle gourd (USVL1VR-Ls)cmolsiB583
CmoCh03G001150Cucumber (Gy14) v2cgybcmoB508
CmoCh03G001150Melon (DHL92) v3.6.1cmomedB689
CmoCh03G001150Melon (DHL92) v3.6.1cmomedB702