CmoCh02G017740 (gene) Cucurbita moschata (Rifu)

NameCmoCh02G017740
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr02 : 10115097 .. 10117182 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAATTCCCAAGCTGGTGGTGAAGTAGGAGGTGCCAAGGCTTTTCATGCCTTCTGGTGCTTGGTCATAGAAAAACTCAAGCTTTGCAACTTCTGCAAAGGCATCTGCTATTCCTGTCAAGGCAAATTGAGGAAGAAGAATGAAAATGGAGAGTGGAACCTGGTCTTCTTTGCGAAAAATCTTGTTTTCTCTAACGGTTTTCAGTCTCATCCTTTCAGTAATACATGCTGCGACCATGATGGTAATTTGCAACACTAGTCCAACACCCATCCTTTGGAGCAATGTGATCCCTCTAGGGTTTTTGGTGAATCGACGAGCAAATGGAACGAAGAAACGGTCATAGATGACAATGCTGATCAGCATAAAGATTGTTACAAAAACTGCAAGGCTTGCTGCAGGAATTTCAAAATGGGGACCCAAGCTTCTGTCAAGGGTGGCGCCTTGTTTCACAAATAGTGTACCCACTTGTGAAACTAGTGCACTTGGAATGAATGTCGCTGCCAGAATGGGTATCATTTTAATCATTTGCTTTGTTTCTTCAACTTGAGTAACAGTGCATAGTGTCCTTGCTGAGCTCGTCTCACCCTGAACGGCTGCTTTATCTAGGAATCTGCAGGTAATGGAGTTCTTCTAATCAAGAAATGAAAGGTTGACCATAATCAGCTTGGAAACTTGTATTTACATTTGGTTCGATAGAATTACCTTAATGAATGAGTATGATCAATCCTATATTTTTTTGAATTAGTGTAATCTTCCAAATTAAGCTCATGAAGCTCCTTTGTATCATCAGGAATTGGCAGTTTCCGGTTCCCCACGGCAGCCACAATCACCTTAGCTATCCTGCTGAAAGGGCTCCCTGAAGGCAATTTGTGCCTATAAAATGGAGTGCCAATCAGAAATACAAGCACAGAGATTGAAAACCCGATAGTTGGAATCCCATATCCAAGGCCCCAACCTACGGTGTCTTGGATGTAAACCAAGAAAGTGTTTGAGAACAGAGTGCCAAAGAAAATGCTGAACATCCACCAATTGAAAAAGGAAAGCTTTTGTGTTCTTTCCTTGGGTTCAAAATCATCAAATTGGTCAGCTCCCATTGTCGAAATGTTGGGTTTGGTTCCACCAGTTCCAATTGCGACTATGTACAATGCACAGAAGAAAATGCCTACTTGGAGAGGCGAGGCTTGTTTGTCACAATGATCTTCTTTGGCCTCATCGCCGCATGATGGTGGTCTCAGGGCTGGCAATGAAACTGACAAGGTTAGCAGGACCATTCCCTGTATGACACAAGTTGGATGAGTCTAACATGTAAGTACAGACTCAAATTCCCTCCTCCATACGTTTATTTCTCTCTTTGAACTTATTCTACTGCTTCTAATGTTTCATCGAAACCAAAAGACAACTCAATGGAGATGAGTTTAGATACCATTAAAATATAGCTCATTCATAGAAAGTTTGAATCTTACAATGAGGTAAATTGCGGAAGATGCGACAAAGGTCCAGTATCGACCAAGATAAGCGTCAGCAATGTAGGCACCTATAATTGGTGTCATCCACACAGTTCCAATCCAGTTGGTGACATTATTGGCAGATGTCACAATGTCTTGATGAAGTTTGTCGGTCATATACACCACCAAGTTTGTTGCAATCCCATAGTATGCCATCCTCTCAAACACCTCGAACACTACATGAAACAAACATGTTGTGAATATTAACCACTTCTTTCTCAACCCAAGAACTCAAAGAACAAAGCCTGATATGGGTTTCTGAATAAGGTAGTTTCTAAATGTTATTGCCTTTTGTGAAGTTATTCTCTTGATTCCCATGATATGGAACCAAGGACCTATTAATCTTAGTTCTTTAAGAAACCAACTCTTTCTTCTTTGATGCTCCTATGAAGGATATCTTCATGCCAAATATTGAAAGACTGAACTCATTACTTGTATTTTTGAACGGAGAGCTTGCAGGTGTGCAGGCTACCAGTTACGCAAAGAAAAAAAAAAAAGAAGAAGAAGAAGAGGAAAGCTTGTTGAAGATTACCAACAATGAAGGAACAGGCTCTCCATCTCCCAGTCTTCGATCTTAA

mRNA sequence

ATGTCCAATTCCCAAGCTGGTGGTGAAGTAGGAGGTGCCAAGGCTTTTCATGCCTTCTGGTGCTTGGTCATAGAAAAACTCAAGCTTTGCAACTTCTGCAAAGGCATCTGCTATTCCTGTCAAGGCAAATTGAGGAAGAAGAATGAAAATGGAGAGTGGAACCTGGTCTTCTTTGCGAAAAATCTTGTTTTCTCTAACGGTTTTCAGTCTCATCCTTTCAGTAATACATGCTGCGACCATGATGGTGTGCAGGCTACCAGTTACGCAAAGAAAAAAAAAAAAGAAGAAGAAGAAGAGGAAAGCTTGTTGAAGATTACCAACAATGAAGGAACAGGCTCTCCATCTCCCAGTCTTCGATCTTAA

Coding sequence (CDS)

ATGTCCAATTCCCAAGCTGGTGGTGAAGTAGGAGGTGCCAAGGCTTTTCATGCCTTCTGGTGCTTGGTCATAGAAAAACTCAAGCTTTGCAACTTCTGCAAAGGCATCTGCTATTCCTGTCAAGGCAAATTGAGGAAGAAGAATGAAAATGGAGAGTGGAACCTGGTCTTCTTTGCGAAAAATCTTGTTTTCTCTAACGGTTTTCAGTCTCATCCTTTCAGTAATACATGCTGCGACCATGATGGTGTGCAGGCTACCAGTTACGCAAAGAAAAAAAAAAAAGAAGAAGAAGAAGAGGAAAGCTTGTTGAAGATTACCAACAATGAAGGAACAGGCTCTCCATCTCCCAGTCTTCGATCTTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G017740.1CmoCh02G017740.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 89..109
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G017740Watermelon (97103) v2cmowmbB622
CmoCh02G017740Watermelon (97103) v2cmowmbB627
CmoCh02G017740Watermelon (97103) v2cmowmbB631
CmoCh02G017740Wax gourdcmowgoB0709
CmoCh02G017740Wax gourdcmowgoB0718
CmoCh02G017740Wax gourdcmowgoB0725
CmoCh02G017740Cucurbita moschata (Rifu)cmocmoB213
CmoCh02G017740Cucurbita moschata (Rifu)cmocmoB303
CmoCh02G017740Cucurbita moschata (Rifu)cmocmoB387
CmoCh02G017740Cucurbita moschata (Rifu)cmocmoB437
CmoCh02G017740Cucurbita moschata (Rifu)cmocmoB446
CmoCh02G017740Cucumber (Gy14) v1cgycmoB0024
CmoCh02G017740Cucumber (Gy14) v1cgycmoB0713
CmoCh02G017740Cucumber (Gy14) v1cgycmoB1057
CmoCh02G017740Cucurbita maxima (Rimu)cmacmoB261
CmoCh02G017740Cucurbita maxima (Rimu)cmacmoB359
CmoCh02G017740Cucurbita maxima (Rimu)cmacmoB523
CmoCh02G017740Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G017740Cucurbita maxima (Rimu)cmacmoB819
CmoCh02G017740Cucurbita maxima (Rimu)cmacmoB909
CmoCh02G017740Wild cucumber (PI 183967)cmocpiB580
CmoCh02G017740Wild cucumber (PI 183967)cmocpiB588
CmoCh02G017740Wild cucumber (PI 183967)cmocpiB595
CmoCh02G017740Cucumber (Chinese Long) v2cmocuB576
CmoCh02G017740Cucumber (Chinese Long) v2cmocuB585
CmoCh02G017740Cucumber (Chinese Long) v2cmocuB590
CmoCh02G017740Melon (DHL92) v3.5.1cmomeB557
CmoCh02G017740Melon (DHL92) v3.5.1cmomeB568
CmoCh02G017740Watermelon (Charleston Gray)cmowcgB558
CmoCh02G017740Watermelon (Charleston Gray)cmowcgB562
CmoCh02G017740Watermelon (Charleston Gray)cmowcgB566
CmoCh02G017740Watermelon (97103) v1cmowmB551
CmoCh02G017740Watermelon (97103) v1cmowmB559
CmoCh02G017740Watermelon (97103) v1cmowmB604
CmoCh02G017740Cucurbita pepo (Zucchini)cmocpeB549
CmoCh02G017740Cucurbita pepo (Zucchini)cmocpeB564
CmoCh02G017740Cucurbita pepo (Zucchini)cmocpeB580
CmoCh02G017740Cucurbita pepo (Zucchini)cmocpeB590
CmoCh02G017740Cucurbita pepo (Zucchini)cmocpeB596
CmoCh02G017740Cucurbita pepo (Zucchini)cmocpeB599
CmoCh02G017740Bottle gourd (USVL1VR-Ls)cmolsiB518
CmoCh02G017740Bottle gourd (USVL1VR-Ls)cmolsiB565
CmoCh02G017740Bottle gourd (USVL1VR-Ls)cmolsiB566
CmoCh02G017740Cucumber (Gy14) v2cgybcmoB219
CmoCh02G017740Cucumber (Gy14) v2cgybcmoB368
CmoCh02G017740Cucumber (Gy14) v2cgybcmoB362
CmoCh02G017740Melon (DHL92) v3.6.1cmomedB636
CmoCh02G017740Melon (DHL92) v3.6.1cmomedB644
CmoCh02G017740Melon (DHL92) v3.6.1cmomedB648
CmoCh02G017740Silver-seed gourdcarcmoB0321
CmoCh02G017740Silver-seed gourdcarcmoB0331
CmoCh02G017740Silver-seed gourdcarcmoB1023
CmoCh02G017740Silver-seed gourdcarcmoB1057
CmoCh02G017740Silver-seed gourdcarcmoB1287
CmoCh02G017740Silver-seed gourdcarcmoB1450
CmoCh02G017740Cucumber (Chinese Long) v3cmocucB0683
CmoCh02G017740Cucumber (Chinese Long) v3cmocucB0695
CmoCh02G017740Cucumber (Chinese Long) v3cmocucB0703