CmoCh02G015990 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G015990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF1639 family protein
Location	Cmo_Chr02 : 9227814 .. 9229269 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGTCTCTCTTTTCTCTTGCCGTTCCTCCGTCTCCACCGCGCACGGCGCTTCCGTCCTGTGCCGTTGATCATCTCTTCTTAGGGATCATTGATCTCTAGAAGCCACTCAAGTTCGTCTCACGAGGCTTTGTAGATACAGATTGTGAAGGTTGTTTCCGAAAACGGCGCCGAGGAAGAAGTATTCTGTGTTTTTACGACGATTTGTCGATAGAGATTGTGGAGTTAGTGGGATTTTCAATGGCTACAGGGCCGGTTAAGTCTCATCCTTTGCACAACTTCGCTCTGCCATTTCTGAAATGGGGTGGGAAGAATCAGACCAACAGTAATCACCGCATTCGGCGGGAAATTGGCGGCGACTCATCACCTGCCGTCGATCATTCTGAACCGGAGTCTGAAGCAGACTCCAAGCATCAACCTCGAGTTGGATCGCGCACCGCTCGGAATAGATTGCCGTTTTCACCATGCTCACTGGGAGATAAATCCGCGAAGCATTCTGAAGGTGAGGTCGGAGAAGAAGTTGTGAAGGAGCAGAAGCGGGAAGGTGAGGAGGTCGAGGGGGAGGAAATAGTGCAGAAGCCTTGGAATCTCAGGCCGCGGAAGGGCCCGTCCTTGAGAGGCTTTGGTGATTTGAAGAATGGACGAGACTTGCAAGAACAGGACGGGGCTGTTTCTTCCGCTGCTGGTGCGTTTCAGCAAGGGGAGAATCCGCAGCCGAAATCGCTCCGGTTGCGAGGATTTACAGAGTCGCATAGGATTGAGAAGAAGGAGAAGAGAAAGTTCTGGATCGCTTTGTCTAAAGATGAGATTGAGGAAGATATTTTTATCATGACTGGATCTAGACCTTCCAGACGGCCGAAGAAGAGACCTAAGAATGTTCAGAAGCAACTCGATGTATGAATTTTCCTGAAATTTCTTACTATTTCTTTTCTGCTTGTGATTGTACTGAAGCGGTTTCGTTATTATTTTTTCTTGATGCTCAATGTATTGTTCGTCTCTCAGAGTGTGTTTCCTGGACTGTGGTTGGTCGGTGTTACAGCAGACGCCTATCGTATTGCCGATTCTCCGGCCAAGGTACTCTAAAAGACTTTTCTTCTTGCCCACAATTAAATGCAATTCCGATTTCCGCCATTTCATTGAATTCTGAACACGACGGTGCATTAATGTTTCTTCATTTCTTCGATTTCGTTTTTCAAACATGACAAACTATCGATTTTTCGTTTTCCCACACGCTTTGGTTTTTGTTGTTGCAGAGATAGGCATGATGACGATGGATATTTTTTGATCATTGAAGTTGGAATATTTTGCCTGCCCTGCCTTGATTGGGAGCCTTGTTGGAGGTATACCGTTCTTACTTCTAGGAAGAAGAAACGAAATTACGATTCAAATTGAACACGTGGGAAATCCAGTTTTTCTGTGTTGTTGTTCCTACTTGTAATAATCTCTCTGGTCGATGA

mRNA sequence

CTCAGTCTCTCTTTTCTCTTGCCGTTCCTCCGTCTCCACCGCGCACGGCGCTTCCGTCCTGTGCCGTTGATCATCTCTTCTTAGGGATCATTGATCTCTAGAAGCCACTCAAGTTCGTCTCACGAGGCTTTGTAGATACAGATTGTGAAGGTTGTTTCCGAAAACGGCGCCGAGGAAGAAGTATTCTGTGTTTTTACGACGATTTGTCGATAGAGATTGTGGAGTTAGTGGGATTTTCAATGGCTACAGGGCCGGTTAAGTCTCATCCTTTGCACAACTTCGCTCTGCCATTTCTGAAATGGGGTGGGAAGAATCAGACCAACAGTAATCACCGCATTCGGCGGGAAATTGGCGGCGACTCATCACCTGCCGTCGATCATTCTGAACCGGAGTCTGAAGCAGACTCCAAGCATCAACCTCGAGTTGGATCGCGCACCGCTCGGAATAGATTGCCGTTTTCACCATGCTCACTGGGAGATAAATCCGCGAAGCATTCTGAAGGTGAGGTCGGAGAAGAAGTTGTGAAGGAGCAGAAGCGGGAAGGTGAGGAGGTCGAGGGGGAGGAAATAGTGCAGAAGCCTTGGAATCTCAGGCCGCGGAAGGGCCCGTCCTTGAGAGGCTTTGGTGATTTGAAGAATGGACGAGACTTGCAAGAACAGGACGGGGCTGTTTCTTCCGCTGCTGGTGCGTTTCAGCAAGGGGAGAATCCGCAGCCGAAATCGCTCCGGTTGCGAGGATTTACAGAGTCGCATAGGATTGAGAAGAAGGAGAAGAGAAAGTTCTGGATCGCTTTGTCTAAAGATGAGATTGAGGAAGATATTTTTATCATGACTGGATCTAGACCTTCCAGACGGCCGAAGAAGAGACCTAAGAATGTTCAGAAGCAACTCGATAGTGTGTTTCCTGGACTGTGGTTGGTCGGTGTTACAGCAGACGCCTATCGTATTGCCGATTCTCCGGCCAAGGAAGAAGAAACGAAATTACGATTCAAATTGAACACGTGGGAAATCCAGTTTTTCTGTGTTGTTGTTCCTACTTGTAATAATCTCTCTGGTCGATGA

Coding sequence (CDS)

ATGGCTACAGGGCCGGTTAAGTCTCATCCTTTGCACAACTTCGCTCTGCCATTTCTGAAATGGGGTGGGAAGAATCAGACCAACAGTAATCACCGCATTCGGCGGGAAATTGGCGGCGACTCATCACCTGCCGTCGATCATTCTGAACCGGAGTCTGAAGCAGACTCCAAGCATCAACCTCGAGTTGGATCGCGCACCGCTCGGAATAGATTGCCGTTTTCACCATGCTCACTGGGAGATAAATCCGCGAAGCATTCTGAAGGTGAGGTCGGAGAAGAAGTTGTGAAGGAGCAGAAGCGGGAAGGTGAGGAGGTCGAGGGGGAGGAAATAGTGCAGAAGCCTTGGAATCTCAGGCCGCGGAAGGGCCCGTCCTTGAGAGGCTTTGGTGATTTGAAGAATGGACGAGACTTGCAAGAACAGGACGGGGCTGTTTCTTCCGCTGCTGGTGCGTTTCAGCAAGGGGAGAATCCGCAGCCGAAATCGCTCCGGTTGCGAGGATTTACAGAGTCGCATAGGATTGAGAAGAAGGAGAAGAGAAAGTTCTGGATCGCTTTGTCTAAAGATGAGATTGAGGAAGATATTTTTATCATGACTGGATCTAGACCTTCCAGACGGCCGAAGAAGAGACCTAAGAATGTTCAGAAGCAACTCGATAGTGTGTTTCCTGGACTGTGGTTGGTCGGTGTTACAGCAGACGCCTATCGTATTGCCGATTCTCCGGCCAAGGAAGAAGAAACGAAATTACGATTCAAATTGAACACGTGGGAAATCCAGTTTTTCTGTGTTGTTGTTCCTACTTGTAATAATCTCTCTGGTCGATGA

Homology

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BLAST of CmoCh02G015990 vs. TrEMBL
Match: A0A0A0KKR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165250 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.0e-121
Identity = 224/245 (91.43%), Postives = 231/245 (94.29%), Query Frame = 1


Query: 1   MATGPVKSHPLHNFALPFLKWGGKNQTNSNHRIRREIGG---DSSPAVDHSEPESEADSK 60
           MATGPVKS PLHNFALPFLKWGGKNQTNSNHRIRR IGG   DSSPAVDHSEPESEADSK
Sbjct: 1   MATGPVKSQPLHNFALPFLKWGGKNQTNSNHRIRRAIGGGGGDSSPAVDHSEPESEADSK 60

Query: 61  HQPRVGSRTARNRLPFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEEIVQKPWNL 120
            Q RVGSRT RNRL FSPCSLGDK AKHSEGEVG+EVVKEQKREGEEVEGEEIVQKPWNL
Sbjct: 61  PQLRVGSRTVRNRLAFSPCSLGDKFAKHSEGEVGDEVVKEQKREGEEVEGEEIVQKPWNL 120

Query: 121 RPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHRIEKKE 180
           RPRKG SLRG+GDLKNG DLQE DGAVSSAAGA QQGENPQPKSLRLRGFTESHRIEKK+
Sbjct: 121 RPRKGTSLRGYGDLKNGGDLQEMDGAVSSAAGASQQGENPQPKSLRLRGFTESHRIEKKD 180

Query: 181 KRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVGVTADAYRIA 240
           KRKFWIALS+DEIEEDIFIMTGSRPSRRPKKRPKNVQKQLD+VFPGLWLVGVTAD+YR+A
Sbjct: 181 KRKFWIALSRDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDTVFPGLWLVGVTADSYRLA 240

Query: 241 DSPAK 243
           DSPAK
Sbjct: 241 DSPAK 245

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BLAST of CmoCh02G015990 vs. TrEMBL
Match: W9RXV3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024064 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65
Identity = 151/268 (56.34%), Postives = 180/268 (67.16%), Query Frame = 1


Query: 1   MATGPVKSHPLHNFALPFLKWGG-KNQTNSNHRIRREIGGDSSPAVDHSEP-------ES 60
           MAT PVKS PLHNF LPFLKWGG KN  + +HR RR I  DSSP  DH +         S
Sbjct: 1   MATAPVKS-PLHNFPLPFLKWGGGKNHASGSHRCRRTISADSSPVADHCDAAEQERNESS 60

Query: 61  EADSKHQPRVGSRTARNRL--PFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEE- 120
           EA+     RVGSRT RNR   PF+ CSL  +  +  E   GE    +  RE E   GEE 
Sbjct: 61  EAEPNRFHRVGSRTVRNRFAAPFASCSLVSEKKESDEVAAGEGKEGDD-REVEAAAGEEE 120

Query: 121 -IVQKPWNLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGEN---PQPKSLRLR 180
            +VQKPWNLRPRK    +   +     +L EQ+ AV   AG   Q EN     PKS+RLR
Sbjct: 121 MMVQKPWNLRPRKALFSKAATNGAKSGELPEQENAV---AGGGHQSENLNQQPPKSMRLR 180

Query: 181 GFTESHRIEKKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLW 240
           G +ES +  +KEKRKFWIALS++EIEEDIF+MTGSRP+RRP+KRPKNVQKQLD+VFPGLW
Sbjct: 181 GLSESQQSSEKEKRKFWIALSREEIEEDIFVMTGSRPARRPRKRPKNVQKQLDAVFPGLW 240

Query: 241 LVGVTADAYRIADSPAKEEETKLRFKLN 254
           LVG+TADAYRI D+PAKE +TK+R  ++
Sbjct: 241 LVGITADAYRIVDAPAKEVDTKMRIYID 263

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BLAST of CmoCh02G015990 vs. TrEMBL
Match: G7JHQ0_MEDTR (DUF1639 family protein OS=Medicago truncatula GN=MTR_4g100570 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 140/254 (55.12%), Postives = 166/254 (65.35%), Query Frame = 1


Query: 1   MATGP--VKSHPLHNFALPFLKWGGKNQTNSN----HRIRREIGGDSSPAVDHSEPESEA 60
           MAT P  VKS PLHNF+LPFLKWGG  + N+N    HR RR       P    SEP+SE 
Sbjct: 1   MATTPASVKSQPLHNFSLPFLKWGGTGKNNTNATNHHRSRR-------PPDHASEPDSEP 60

Query: 61  DSKHQPRVGSRTARNRLPF-SPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVE-----GE 120
           DS+   R+GSRTARNR  F S  S        S     ++   ++KR+ E+        E
Sbjct: 61  DSRPH-RLGSRTARNRFGFASSSSQRQAPPTPSSNNETDDNAGDRKRDAEDDAEAGGGAE 120

Query: 121 EIVQKPWNLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFT 180
           EIVQKPWNLRPRK    RG  ++  G       G +         GENP PKSLRLRGF 
Sbjct: 121 EIVQKPWNLRPRKPMIPRGGFEIGAGGSRNNNGGELQEGVN----GENPAPKSLRLRGFA 180

Query: 181 ESHRIEKKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVG 240
           +++  EKKEKRKFWIALSKDEIEEDIF+MTGSRP+RRP+KR KNVQKQ+D+VFPGLWLVG
Sbjct: 181 DTNCGEKKEKRKFWIALSKDEIEEDIFVMTGSRPNRRPRKRAKNVQKQMDNVFPGLWLVG 240

Query: 241 VTADAYRIADSPAK 243
           +TADAYR+AD+P K
Sbjct: 241 ITADAYRVADTPTK 242

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BLAST of CmoCh02G015990 vs. TrEMBL
Match: V7CFN6_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_003G223000g PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-58
Identity = 139/250 (55.60%), Postives = 164/250 (65.60%), Query Frame = 1


Query: 2   ATGPVKSHPLHNFALPFLKWG--GKNQTNS--NHRIRREIGGDSSPAVDH-SEPESEADS 61
           A  PVKS PLHNFALPFLKWG  GKN TN+  +HR RR     SS + DH SEP+S+ DS
Sbjct: 62  AQPPVKSQPLHNFALPFLKWGASGKNHTNAAHHHRCRRP----SSLSSDHASEPDSDPDS 121

Query: 62  KHQPRVGSRTARNRLPFSPCSLGDKSAKHSEGE---VGEEVVKEQKREGEEVEGEEIVQK 121
           +   RVGSRT RNR     CSL          +     +E   E  +   E + EE VQK
Sbjct: 122 RPH-RVGSRTTRNRFALPTCSLKPLPPPPEPPQPPSCNDETDDEAAKRDIE-DAEEAVQK 181

Query: 122 PWNLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAA-GAFQQGENPQPKSLRLRGFTESHR 181
           PWNLRPRK    +   ++  G      +  V     G    GENP PKSLRLRGF ++  
Sbjct: 182 PWNLRPRKPALPKSALEIGTGPSRNHANNGVGEFHDGVSHHGENPAPKSLRLRGFADTQC 241

Query: 182 IEKKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVGVTAD 241
            EKKEKRKFWIALS++EIEEDIF+MTGSRP+RRP+KRPKNVQKQ+DSVFPGLWLVG+TAD
Sbjct: 242 AEKKEKRKFWIALSREEIEEDIFVMTGSRPARRPRKRPKNVQKQMDSVFPGLWLVGITAD 301

Query: 242 AYRIADSPAK 243
           AYR+ D+P K
Sbjct: 302 AYRVPDTPTK 305

[Close]

BLAST of CmoCh02G015990 vs. TrEMBL
Match: A0A0S3R5N3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G374600 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.2e-58
Identity = 143/260 (55.00%), Postives = 168/260 (64.62%), Query Frame = 1


Query: 2   ATGPVKSHPLHNFALPFLKWG--GKN-QTNS--NHRIRREIGGDSSPAVDHSEPESEADS 61
           A  PVKS PLHNFALPFLKWG  GKN  TN+  +HR RR     S P+   SEP+S+ DS
Sbjct: 6   AQPPVKSQPLHNFALPFLKWGASGKNHHTNAAHHHRCRRP---SSHPSDHASEPDSDPDS 65

Query: 62  KHQPRVGSRTARNRLPFSPCSLGDKS-------AKHSEGEVGEEVVKEQKREGEEVEGEE 121
           +   R+GSRTARNR     CSL   +       A     E  +E  K    + EE     
Sbjct: 66  RPH-RLGSRTARNRFALPTCSLKPLAPPPQPLQAPSCNDETDDEAAKRDIEDAEEA---- 125

Query: 122 IVQKPWNLRPRKGPSLR------GFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLR 181
            VQKPWNLRPRK P+L       G G  +N       +GA        + GENP PKSLR
Sbjct: 126 -VQKPWNLRPRK-PALPKSALEIGTGPSRN----HANNGAGEFHDAVVRNGENPAPKSLR 185

Query: 182 LRGFTESHRIEKKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPG 241
           LRGF ++   EKKEKRKFWIALS++EIEEDIF+MTGSRP+RRP+KRPKNVQKQ+DSVFPG
Sbjct: 186 LRGFADTQCAEKKEKRKFWIALSREEIEEDIFVMTGSRPARRPRKRPKNVQKQMDSVFPG 245

Query: 242 LWLVGVTADAYRIADSPAKE 244
           LWLVG+TADAYRI D+P K+
Sbjct: 246 LWLVGITADAYRIPDTPTKK 251

[Close]

BLAST of CmoCh02G015990 vs. TAIR10
Match: AT4G17440.1 (AT4G17440.1 Protein of unknown function (DUF1639))

HSP 1 Score: 109.0 bits (271), Expect = 4.7e-24
Identity = 82/197 (41.62%), Postives = 106/197 (53.81%), Query Frame = 1


Query: 62  VGSRTARN-RLPFS---PCSLGD--KSAKHSEGEVGEEVVKEQKREGEEVEGEEIVQKPW 121
           V SR++R  RL FS   P S  D  K  K  E     E V    +E EE E EE  ++ W
Sbjct: 25  VASRSSRQPRLSFSSFAPSSEHDNLKKLKSDEISPAREEVPVSVKEREETEEEE-AKRTW 84

Query: 122 NLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQ-----QGENPQPKSLRLRGF-TE 181
           NLRPRK      +G  K G  +   +       G  +      G   +PKS R RG   E
Sbjct: 85  NLRPRKA-----YGGSKKGNGVFTAEVCGGGGGGGSEVKNQKSGAGIEPKSNRQRGIPAE 144

Query: 182 SHRIE----KKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLW 241
           S  +       E  + W+AL++DEIEED+F M+G+R SRRP+KR K +QK LD +FPGL 
Sbjct: 145 SPGLGGGEVANENHRLWVALARDEIEEDLFSMSGNRSSRRPRKRAKAMQKHLDVIFPGLG 204

Query: 242 LVGVTADAYRIADSPAK 243
           LVG+ AD +R+A SPAK
Sbjct: 205 LVGMNADCFRVATSPAK 215

[Close]

BLAST of CmoCh02G015990 vs. TAIR10
Match: AT3G60410.1 (AT3G60410.1 Protein of unknown function (DUF1639))

HSP 1 Score: 108.6 bits (270), Expect = 6.1e-24
Identity = 91/286 (31.82%), Postives = 138/286 (48.25%), Query Frame = 1


Query: 2   ATGPVKSHPLHNFALPFLKWG-----------------------GKNQ---------TNS 61
           ++ PVKSHPLHNF L  L+W                        GK           + S
Sbjct: 44  SSSPVKSHPLHNFPLSDLRWAMNHANTHRLRKASSRSPLREANTGKGNLVIEEVNEASGS 103

Query: 62  NHRIRRE-----IGGDSSPAVDHSEPESEA-DSKHQPRVGSRTARNRLPFSPCSLGDK-- 121
           +  +R E       G S  A D S  +S   D + +  +  RT  N        +     
Sbjct: 104 SFELRPEKKKGNASGVSDSAADRSATKSTTPDGRSKIFIRIRTKNNEETAVSTDIATSVA 163

Query: 122 -SAKHSEGEVGEEVVKEQKR--EGEEVEGEEIVQKPWNLRPRKGPSLRGFGDLKNGRDLQ 181
            S + ++   G  +  E +R  +G   E +E   K WNLRPR+ P  +        R + 
Sbjct: 164 ASVQVTDDSAGPAIDAEGERISDGGGQEADEFGPKTWNLRPRRPPPTKK-------RSIG 223

Query: 182 EQDGAVSSAAGAFQQGEN---PQPKSLRLRGFTESHRI--EKKEKR-KFWIALSKDEIEE 239
              G + S  GA  + ++    + +S+R R   ++     E+KEK+ +  I+LSK EI+E
Sbjct: 224 HGGGVLKSCNGALPENKSLGTVRTESIRSRNGVDAKMATTERKEKKPRLSISLSKLEIDE 283

[Close]

BLAST of CmoCh02G015990 vs. TAIR10
Match: AT3G18295.1 (AT3G18295.1 Protein of unknown function (DUF1639))

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 72/242 (29.75%), Postives = 111/242 (45.87%), Query Frame = 1


Query: 5   PVKSHPLHNFALPFLKWGGKNQTNSNHRIRREIGGDSSPAVDHSEPESEADSKHQPRVGS 64
           P +S  LHNF LP+L+WG +       R  +    + SP+   S      D  H+   G 
Sbjct: 7   PERSKRLHNFTLPYLRWGQQRFL----RCVKLPHHNRSPSFPSSSSSPSPD--HRSHNGG 66

Query: 65  RTARNRLPFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEEI-VQKPWNLRPRKGP 124
            +   RL     +   K +    G             G+   G+ +   +PWNLR R+  
Sbjct: 67  LSGELRLDLVYDANRPKLSVLGNG-------------GDNNNGDVVAAARPWNLRTRRAA 126

Query: 125 SLRGFGD-----LKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHRIEKKEK 184
                GD     +++   L+  +  V    G+   G++ Q                K EK
Sbjct: 127 CNEPPGDDSTRIIESSSSLRRHEIGV-KRGGSEDGGDSQQ---------------NKNEK 186

Query: 185 RKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLV-GVTADAYRIA 240
            KF ++L ++EIE+D   + G RP RRPKKRP+ VQKQ++++FPGLWL   VTAD+Y + 
Sbjct: 187 VKFSVSLLREEIEQDFSALIGKRPPRRPKKRPRLVQKQMNTLFPGLWLAEEVTADSYDVP 213

[Close]

BLAST of CmoCh02G015990 vs. TAIR10
Match: AT1G25370.1 (AT1G25370.1 Protein of unknown function (DUF1639))

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-14
Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 1


Query: 113 KPWNLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHR 172
           KPWNLR R+  + +           + +  ++ +     ++     P  +R  G      
Sbjct: 152 KPWNLRKRRAAACK-----------EPESNSLINKGIVIEEKVVKNPSPVRGGGGV---- 211

Query: 173 IEKKEKRK-FWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVGVTA 232
           +E ++KR  F + LSK E+EED   M G R  RRPKKR K VQK+LDS+FPGL+L  VT 
Sbjct: 212 VEAEKKRPMFSMKLSKKEMEEDFIGMVGHRAPRRPKKRSKTVQKKLDSLFPGLYLTEVTH 263

Query: 233 DAYRIAD 239
           DAY++ +
Sbjct: 272 DAYKVPE 263

[Close]

BLAST of CmoCh02G015990 vs. TAIR10
Match: AT1G48770.1 (AT1G48770.1 Protein of unknown function (DUF1639))

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-12
Identity = 57/168 (33.93%), Postives = 77/168 (45.83%), Query Frame = 1


Query: 71  LPFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEEIVQ--KPWNLRPRKGPSLRGF 130
           LP  P S        +   V    V   +  G   +  E+V   KPWNLR R+       
Sbjct: 32  LPSPPPSSSSPDHAATNRSVSIAGVSLTRGGGGGAKNGEVVAAAKPWNLRMRRA------ 91

Query: 131 GDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHRIEKKEKRKFWIALSKD 190
                         A S      + G N   K   +    +    +K EK KF IALS+D
Sbjct: 92  --------------ACSEPGEEIEIGVN---KRRSIIDNEDGGGDKKNEKSKFSIALSRD 151

Query: 191 EIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWL--VGVTADAY 235
           EIE+D   + G +P +RPKKRP+ VQK+L+++FPGLWL    VT D+Y
Sbjct: 152 EIEQDFSFVFGKKPPKRPKKRPRLVQKKLNTIFPGLWLNEEEVTIDSY 176

[Close]

BLAST of CmoCh02G015990 vs. NCBI nr
Match: gi|449469365|ref|XP_004152391.1| (PREDICTED: uncharacterized protein LOC101222282 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 8.6e-121
Identity = 224/245 (91.43%), Postives = 231/245 (94.29%), Query Frame = 1


Query: 1   MATGPVKSHPLHNFALPFLKWGGKNQTNSNHRIRREIGG---DSSPAVDHSEPESEADSK 60
           MATGPVKS PLHNFALPFLKWGGKNQTNSNHRIRR IGG   DSSPAVDHSEPESEADSK
Sbjct: 1   MATGPVKSQPLHNFALPFLKWGGKNQTNSNHRIRRAIGGGGGDSSPAVDHSEPESEADSK 60

Query: 61  HQPRVGSRTARNRLPFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEEIVQKPWNL 120
            Q RVGSRT RNRL FSPCSLGDK AKHSEGEVG+EVVKEQKREGEEVEGEEIVQKPWNL
Sbjct: 61  PQLRVGSRTVRNRLAFSPCSLGDKFAKHSEGEVGDEVVKEQKREGEEVEGEEIVQKPWNL 120

Query: 121 RPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHRIEKKE 180
           RPRKG SLRG+GDLKNG DLQE DGAVSSAAGA QQGENPQPKSLRLRGFTESHRIEKK+
Sbjct: 121 RPRKGTSLRGYGDLKNGGDLQEMDGAVSSAAGASQQGENPQPKSLRLRGFTESHRIEKKD 180

Query: 181 KRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVGVTADAYRIA 240
           KRKFWIALS+DEIEEDIFIMTGSRPSRRPKKRPKNVQKQLD+VFPGLWLVGVTAD+YR+A
Sbjct: 181 KRKFWIALSRDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDTVFPGLWLVGVTADSYRLA 240

Query: 241 DSPAK 243
           DSPAK
Sbjct: 241 DSPAK 245

[Close]

BLAST of CmoCh02G015990 vs. NCBI nr
Match: gi|659073409|ref|XP_008437045.1| (PREDICTED: uncharacterized protein LOC103482589 [Cucumis melo])

HSP 1 Score: 437.6 bits (1124), Expect = 1.6e-119
Identity = 221/245 (90.20%), Postives = 229/245 (93.47%), Query Frame = 1


Query: 1   MATGPVKSHPLHNFALPFLKWGGKNQTNSNHRIRREIGG---DSSPAVDHSEPESEADSK 60
           MATGPVKS PLHNFALPFLKWGGKNQTNSNHRIRR IGG   DSSPAVDHSEPESEADSK
Sbjct: 1   MATGPVKSQPLHNFALPFLKWGGKNQTNSNHRIRRAIGGGGGDSSPAVDHSEPESEADSK 60

Query: 61  HQPRVGSRTARNRLPFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEEIVQKPWNL 120
            Q RVGSRT RNRL FSPCSLGDK AKHSEGEVG+EVVKEQKREGEE+EGEE VQKPWNL
Sbjct: 61  PQLRVGSRTVRNRLAFSPCSLGDKFAKHSEGEVGDEVVKEQKREGEEIEGEETVQKPWNL 120

Query: 121 RPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHRIEKKE 180
           RPRKG SLRG+GDLKNG DLQE DGAVSS AGA QQGENPQPKSLRLRGFTESHRIEKK+
Sbjct: 121 RPRKGTSLRGYGDLKNGGDLQEMDGAVSSPAGASQQGENPQPKSLRLRGFTESHRIEKKD 180

Query: 181 KRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVGVTADAYRIA 240
           KRKFWIALS+DEIEEDIFIMTGSRPSRRPKKRPKNVQKQLD+VFPGLWLVGVTAD+YR+A
Sbjct: 181 KRKFWIALSRDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDTVFPGLWLVGVTADSYRLA 240

Query: 241 DSPAK 243
           DSPAK
Sbjct: 241 DSPAK 245

[Close]

BLAST of CmoCh02G015990 vs. NCBI nr
Match: gi|703131361|ref|XP_010104863.1| (hypothetical protein L484_024064 [Morus notabilis])

HSP 1 Score: 257.7 bits (657), Expect = 2.3e-65
Identity = 151/268 (56.34%), Postives = 180/268 (67.16%), Query Frame = 1


Query: 1   MATGPVKSHPLHNFALPFLKWGG-KNQTNSNHRIRREIGGDSSPAVDHSEP-------ES 60
           MAT PVKS PLHNF LPFLKWGG KN  + +HR RR I  DSSP  DH +         S
Sbjct: 1   MATAPVKS-PLHNFPLPFLKWGGGKNHASGSHRCRRTISADSSPVADHCDAAEQERNESS 60

Query: 61  EADSKHQPRVGSRTARNRL--PFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEGEE- 120
           EA+     RVGSRT RNR   PF+ CSL  +  +  E   GE    +  RE E   GEE 
Sbjct: 61  EAEPNRFHRVGSRTVRNRFAAPFASCSLVSEKKESDEVAAGEGKEGDD-REVEAAAGEEE 120

Query: 121 -IVQKPWNLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGEN---PQPKSLRLR 180
            +VQKPWNLRPRK    +   +     +L EQ+ AV   AG   Q EN     PKS+RLR
Sbjct: 121 MMVQKPWNLRPRKALFSKAATNGAKSGELPEQENAV---AGGGHQSENLNQQPPKSMRLR 180

Query: 181 GFTESHRIEKKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLW 240
           G +ES +  +KEKRKFWIALS++EIEEDIF+MTGSRP+RRP+KRPKNVQKQLD+VFPGLW
Sbjct: 181 GLSESQQSSEKEKRKFWIALSREEIEEDIFVMTGSRPARRPRKRPKNVQKQLDAVFPGLW 240

Query: 241 LVGVTADAYRIADSPAKEEETKLRFKLN 254
           LVG+TADAYRI D+PAKE +TK+R  ++
Sbjct: 241 LVGITADAYRIVDAPAKEVDTKMRIYID 263

[Close]

BLAST of CmoCh02G015990 vs. NCBI nr
Match: gi|502152471|ref|XP_004508940.1| (PREDICTED: uncharacterized protein LOC101492028 [Cicer arietinum])

HSP 1 Score: 249.6 bits (636), Expect = 6.3e-63
Identity = 140/245 (57.14%), Postives = 168/245 (68.57%), Query Frame = 1


Query: 2   ATGPVKSHPLHNFALPFLKWGG--KNQTNSNHRIRREIGGDSSPAVDHSEPESEADSKHQ 61
           A  PVKS PLHNF+LPFLKWGG  KN TNSN+  R      S    DH+ PE +++   +
Sbjct: 4   APAPVKSQPLHNFSLPFLKWGGTGKNHTNSNNHQR------SRRPPDHASPEPDSEPDSR 63

Query: 62  P-RVGSRTARNRLPFSPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVEG-EEIVQKPWNL 121
           P R+GSRTARNR      S   + A  S     ++   ++KREGE+  G EEIVQKPWNL
Sbjct: 64  PHRLGSRTARNRFGLPSSSSSHRHATVSSNHETDDDAGDRKREGEDEAGAEEIVQKPWNL 123

Query: 122 RPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFTESHRIEKKE 181
           RPRK    RG  ++  G      +G     A     G+NP PKSLRLRGF ++   EKKE
Sbjct: 124 RPRKPMIPRGAFEIGAGGSRNNHNGGELVEA-VNNNGDNPTPKSLRLRGFADTSCTEKKE 183

Query: 182 KRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVGVTADAYRIA 241
           KRKFWIALSK+EIEEDIF+MTGSRP+RRP+KRPKNVQKQ+DSVFPGLWLVG+TADAYR+A
Sbjct: 184 KRKFWIALSKEEIEEDIFVMTGSRPNRRPRKRPKNVQKQMDSVFPGLWLVGITADAYRVA 241

Query: 242 DSPAK 243
           D+P K
Sbjct: 244 DTPTK 241

[Close]

BLAST of CmoCh02G015990 vs. NCBI nr
Match: gi|357476777|ref|XP_003608674.1| (DUF1639 family protein [Medicago truncatula])

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58
Identity = 140/254 (55.12%), Postives = 166/254 (65.35%), Query Frame = 1


Query: 1   MATGP--VKSHPLHNFALPFLKWGGKNQTNSN----HRIRREIGGDSSPAVDHSEPESEA 60
           MAT P  VKS PLHNF+LPFLKWGG  + N+N    HR RR       P    SEP+SE 
Sbjct: 1   MATTPASVKSQPLHNFSLPFLKWGGTGKNNTNATNHHRSRR-------PPDHASEPDSEP 60

Query: 61  DSKHQPRVGSRTARNRLPF-SPCSLGDKSAKHSEGEVGEEVVKEQKREGEEVE-----GE 120
           DS+   R+GSRTARNR  F S  S        S     ++   ++KR+ E+        E
Sbjct: 61  DSRPH-RLGSRTARNRFGFASSSSQRQAPPTPSSNNETDDNAGDRKRDAEDDAEAGGGAE 120

Query: 121 EIVQKPWNLRPRKGPSLRGFGDLKNGRDLQEQDGAVSSAAGAFQQGENPQPKSLRLRGFT 180
           EIVQKPWNLRPRK    RG  ++  G       G +         GENP PKSLRLRGF 
Sbjct: 121 EIVQKPWNLRPRKPMIPRGGFEIGAGGSRNNNGGELQEGVN----GENPAPKSLRLRGFA 180

Query: 181 ESHRIEKKEKRKFWIALSKDEIEEDIFIMTGSRPSRRPKKRPKNVQKQLDSVFPGLWLVG 240
           +++  EKKEKRKFWIALSKDEIEEDIF+MTGSRP+RRP+KR KNVQKQ+D+VFPGLWLVG
Sbjct: 181 DTNCGEKKEKRKFWIALSKDEIEEDIFVMTGSRPNRRPRKRAKNVQKQMDNVFPGLWLVG 240

Query: 241 VTADAYRIADSPAK 243
           +TADAYR+AD+P K
Sbjct: 241 ITADAYRVADTPTK 242

The following BLAST results are available for this feature:

BLAST of CmoCh02G015990 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh02G015990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKR0_CUCSA	6.0e-121	91.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165250 PE=4 SV=1	[more]
W9RXV3_9ROSA	1.6e-65	56.34	Uncharacterized protein OS=Morus notabilis GN=L484_024064 PE=4 SV=1	[more]
G7JHQ0_MEDTR	1.1e-58	55.12	DUF1639 family protein OS=Medicago truncatula GN=MTR_4g100570 PE=4 SV=1	[more]
V7CFN6_PHAVU	2.5e-58	55.60	Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_003G223000g PE...	[more]
A0A0S3R5N3_PHAAN	4.2e-58	55.00	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G374600 PE=...	[more]

BLAST of CmoCh02G015990 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17440.1	4.7e-24	41.62	Protein of unknown function (DUF1639)	[more]
AT3G60410.1	6.1e-24	31.82	Protein of unknown function (DUF1639)	[more]
AT3G18295.1	1.2e-16	29.75	Protein of unknown function (DUF1639)	[more]
AT1G25370.1	7.5e-14	37.01	Protein of unknown function (DUF1639)	[more]
AT1G48770.1	9.2e-12	33.93	Protein of unknown function (DUF1639)	[more]

BLAST of CmoCh02G015990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469365\|ref\|XP_004152391.1\|	8.6e-121	91.43	PREDICTED: uncharacterized protein LOC101222282 [Cucumis sativus]	[more]
gi\|659073409\|ref\|XP_008437045.1\|	1.6e-119	90.20	PREDICTED: uncharacterized protein LOC103482589 [Cucumis melo]	[more]
gi\|703131361\|ref\|XP_010104863.1\|	2.3e-65	56.34	hypothetical protein L484_024064 [Morus notabilis]	[more]
gi\|502152471\|ref\|XP_004508940.1\|	6.3e-63	57.14	PREDICTED: uncharacterized protein LOC101492028 [Cicer arietinum]	[more]
gi\|357476777\|ref\|XP_003608674.1\|	1.6e-58	55.12	DUF1639 family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012438	DUF1639

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G015990.1	CmoCh02G015990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012438	Protein of unknown function DUF1639	PFAM	PF07797	DUF1639	coord: 185..234 score: 8.6
None	No IPR available	PANTHER	PTHR33130	FAMILY NOT NAMED	coord: 1..261 score: 3.0
None	No IPR available	PANTHER	PTHR33130:SF10	SUBFAMILY NOT NAMED	coord: 1..261 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G015990	Cucsa.129720	Cucumber (Gy14) v1	cgycmoB0346
CmoCh02G015990	CmaCh15G011040	Cucurbita maxima (Rimu)	cmacmoB298
CmoCh02G015990	CmaCh02G015600	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G015990	Cla003661	Watermelon (97103) v1	cmowmB572
CmoCh02G015990	Csa5G165250	Cucumber (Chinese Long) v2	cmocuB600
CmoCh02G015990	MELO3C005512	Melon (DHL92) v3.5.1	cmomeB519
CmoCh02G015990	ClCG01G004270	Watermelon (Charleston Gray)	cmowcgB516
CmoCh02G015990	CSPI05G07070	Wild cucumber (PI 183967)	cmocpiB606
CmoCh02G015990	Lsi09G004470	Bottle gourd (USVL1VR-Ls)	cmolsiB519
CmoCh02G015990	Cp4.1LG13g02460	Cucurbita pepo (Zucchini)	cmocpeB550
CmoCh02G015990	Cp4.1LG05g02450	Cucurbita pepo (Zucchini)	cmocpeB596
CmoCh02G015990	MELO3C005512.2	Melon (DHL92) v3.6.1	cmomedB598
CmoCh02G015990	CsaV3_5G004470	Cucumber (Chinese Long) v3	cmocucB0720
CmoCh02G015990	Cla97C01G004440	Watermelon (97103) v2	cmowmbB575
CmoCh02G015990	Bhi12G000465	Wax gourd	cmowgoB0708
CmoCh02G015990	CsGy5G004460	Cucumber (Gy14) v2	cgybcmoB615
CmoCh02G015990	Carg08787	Silver-seed gourd	carcmoB1057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G015990	Cucurbita pepo (Zucchini)	cmocpeB558
CmoCh02G015990	Cucurbita pepo (Zucchini)	cmocpeB601
CmoCh02G015990	Bottle gourd (USVL1VR-Ls)	cmolsiB574
CmoCh02G015990	Cucumber (Gy14) v2	cgybcmoB370
CmoCh02G015990	Melon (DHL92) v3.6.1	cmomedB652
CmoCh02G015990	Cucumber (Chinese Long) v3	cmocucB0705
CmoCh02G015990	Watermelon (97103) v2	cmowmbB585
CmoCh02G015990	Cucurbita moschata (Rifu)	cmocmoB282
CmoCh02G015990	Cucurbita moschata (Rifu)	cmocmoB438
CmoCh02G015990	Cucumber (Gy14) v1	cgycmoB0889
CmoCh02G015990	Cucurbita maxima (Rimu)	cmacmoB334
CmoCh02G015990	Cucurbita maxima (Rimu)	cmacmoB820
CmoCh02G015990	Wild cucumber (PI 183967)	cmocpiB597
CmoCh02G015990	Cucumber (Chinese Long) v2	cmocuB592
CmoCh02G015990	Melon (DHL92) v3.5.1	cmomeB566
CmoCh02G015990	Watermelon (Charleston Gray)	cmowcgB513