CmoCh02G011560 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G011560
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr02 : 6988277 .. 6989317 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCGGTACATCTCATTTTGTCATGGTGGAAAGCTGGAGGAGGCATCCATACTGTCATCATTCATTCATCATACAGCTGGGTCGGTTCGAACATATCTCTTATTCGAGATAAATGCCCAGCCTTGTGGTTCTGGGATATGTTGAAAATGGATGAATGAGTGAGTACACACAGGGAGTTGTGTTTGCCTCCTTGTTATGCCCCGCTTATAGGCACCCTTGTGCTACTCTATGAACTTCTACTTCCTTTAGCAGTTGTTCTATTTAAGGACTTTATCCATTCATATTTTTGTTTAATTTTTTCTGCATCAGTCTTATGAATTTCATGGTCCGGTTGTATTCATCTCTTTCTCTCCACTTCATATTGTAAACCTTTAAGGACAGACACACCTTCATACCAATATACCGTTAAGGGCATCATTCCTGTACGTTCGTTCATTCTTTTTGGTTAGCTTCATTATGTAGCTGTGTTCTCTGCATGATATGTAAAGCTTTACAGAAACATCACAGAATTGTGATGGGTGAAAGGCTGAAACGCCCGTGTTCTTCCAGTTCGGTTGGCTTGTTTATACCTCCTTTTCTTTACTTGGAAGGTCTGTTTGTGAATAAATGTTGCCTTGGTTTGTTCTGCATATTTGAACTCAAAATGTTTGCAGGCTCTTCTATATTTGAATGAAGACGACAACGATGTTGCCTGTTGTGCACATTTTCAGTATTGCGTTTGGATGAAGCGACCGAGGAAGGCTTCCTTCGCATGTTAGAGGTAAAACCCTTTTGACCGCTCATTCTTGAACCAACATCATTTCATTTAGGCACTTGTCGAATAGCTTCCTTCTGGGACTTGTTCGATATAATTATGAAAATTTAAGGTCTAAGCTTGTAATTTTGATGTTAGAATGCTAAGCGGATTTATTATGGTATCAATTTTGAGTTTTTGTTGGCCTTAAAATTAGGATTCTACGTGGTTGACATTTGAAAATTTTTGAATTGTTTTTGTAGCAACGGATCAATTTGCTCACTTGGCCACTGCTCAAATCTGA

mRNA sequence

ATGAAGTCGGTACATCTCATTTTGTCATGGTGGAAAGCTGGAGGAGGCATCCATACTGTCATCATTCATTCATCATACAGCTGGGTCGGTTCGAACATATCTCTTATTCGAGATAAATGCCCAGCCTTCTGTGTTCTCTGCATGATATGTAAAGCTTTACAGAAACATCACAGAATTGTGATGGGTGAAAGGCTGAAACGCCCGTGTTCTTCCAGTTCGGCTCTTCTATATTTGAATGAAGACGACAACGATGTTGCCTGTTGTGCACATTTTCAGTATTGCGTTTGGATGAAGCGACCGAGGAAGGCTTCCTTCGCATCAACGGATCAATTTGCTCACTTGGCCACTGCTCAAATCTGA

Coding sequence (CDS)

ATGAAGTCGGTACATCTCATTTTGTCATGGTGGAAAGCTGGAGGAGGCATCCATACTGTCATCATTCATTCATCATACAGCTGGGTCGGTTCGAACATATCTCTTATTCGAGATAAATGCCCAGCCTTCTGTGTTCTCTGCATGATATGTAAAGCTTTACAGAAACATCACAGAATTGTGATGGGTGAAAGGCTGAAACGCCCGTGTTCTTCCAGTTCGGCTCTTCTATATTTGAATGAAGACGACAACGATGTTGCCTGTTGTGCACATTTTCAGTATTGCGTTTGGATGAAGCGACCGAGGAAGGCTTCCTTCGCATCAACGGATCAATTTGCTCACTTGGCCACTGCTCAAATCTGA
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh02G011560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh02G011560 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmoCh02G011560 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh02G011560 vs. NCBI nr
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G011560.1CmoCh02G011560.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G011560CmaCh02G011280Cucurbita maxima (Rimu)cmacmoB619
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G011560Bottle gourd (USVL1VR-Ls)cmolsiB520
CmoCh02G011560Bottle gourd (USVL1VR-Ls)cmolsiB557
CmoCh02G011560Bottle gourd (USVL1VR-Ls)cmolsiB559
CmoCh02G011560Cucumber (Gy14) v2cgybcmoB372
CmoCh02G011560Cucumber (Gy14) v2cgybcmoB618
CmoCh02G011560Melon (DHL92) v3.6.1cmomedB591
CmoCh02G011560Melon (DHL92) v3.6.1cmomedB650
CmoCh02G011560Melon (DHL92) v3.6.1cmomedB653
CmoCh02G011560Silver-seed gourdcarcmoB0377
CmoCh02G011560Silver-seed gourdcarcmoB0694
CmoCh02G011560Silver-seed gourdcarcmoB0734
CmoCh02G011560Silver-seed gourdcarcmoB1329
CmoCh02G011560Cucumber (Chinese Long) v3cmocucB0707
CmoCh02G011560Cucumber (Chinese Long) v3cmocucB0710
CmoCh02G011560Cucumber (Chinese Long) v3cmocucB0723
CmoCh02G011560Watermelon (97103) v2cmowmbB580
CmoCh02G011560Watermelon (97103) v2cmowmbB621
CmoCh02G011560Watermelon (97103) v2cmowmbB625
CmoCh02G011560Wax gourdcmowgoB0703
CmoCh02G011560Wax gourdcmowgoB0719
CmoCh02G011560Cucurbita moschata (Rifu)cmocmoB212
CmoCh02G011560Cucurbita moschata (Rifu)cmocmoB251
CmoCh02G011560Cucurbita moschata (Rifu)cmocmoB281
CmoCh02G011560Cucurbita moschata (Rifu)cmocmoB333
CmoCh02G011560Cucumber (Gy14) v1cgycmoB0011
CmoCh02G011560Cucumber (Gy14) v1cgycmoB0603
CmoCh02G011560Cucumber (Gy14) v1cgycmoB0712
CmoCh02G011560Cucurbita maxima (Rimu)cmacmoB260
CmoCh02G011560Cucurbita maxima (Rimu)cmacmoB299
CmoCh02G011560Cucurbita maxima (Rimu)cmacmoB333
CmoCh02G011560Cucurbita maxima (Rimu)cmacmoB416
CmoCh02G011560Wild cucumber (PI 183967)cmocpiB599
CmoCh02G011560Wild cucumber (PI 183967)cmocpiB601
CmoCh02G011560Wild cucumber (PI 183967)cmocpiB611
CmoCh02G011560Cucumber (Chinese Long) v2cmocuB593
CmoCh02G011560Cucumber (Chinese Long) v2cmocuB595
CmoCh02G011560Cucumber (Chinese Long) v2cmocuB603
CmoCh02G011560Melon (DHL92) v3.5.1cmomeB515
CmoCh02G011560Melon (DHL92) v3.5.1cmomeB567
CmoCh02G011560Melon (DHL92) v3.5.1cmomeB572
CmoCh02G011560Watermelon (Charleston Gray)cmowcgB520
CmoCh02G011560Watermelon (Charleston Gray)cmowcgB557
CmoCh02G011560Watermelon (Charleston Gray)cmowcgB560
CmoCh02G011560Watermelon (97103) v1cmowmB558
CmoCh02G011560Watermelon (97103) v1cmowmB567
CmoCh02G011560Cucurbita pepo (Zucchini)cmocpeB546
CmoCh02G011560Cucurbita pepo (Zucchini)cmocpeB551
CmoCh02G011560Cucurbita pepo (Zucchini)cmocpeB557
CmoCh02G011560Cucurbita pepo (Zucchini)cmocpeB589
CmoCh02G011560Cucurbita pepo (Zucchini)cmocpeB595