CmoCh02G009430 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G009430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionFAS-associated factor 2-B
LocationCmo_Chr02 : 5773750 .. 5775519 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGATTAAAATAGATTTATTTAAAAAACAGAATTATTTTACTTCGACGCGTTTCACCGGGGTATGATCAGCATCTCATCTTTTGTGACGATTGATCGAGAGAGGGCGAAGAAGAAGATTTGAGGCCGATCATTCTCCGAGGAATTTGAAACGAGACGAACGAAAGAGACCCACAAAATTCTTCCATTCATTTTTGTCCTTGCCGGATATGGTTGATGTTGCTGATAAATTAGCCTATTTCCAAGCGATTACAGGCTTAGAAGATCCCGAAATCTGCACCGAAATCCTTTCCGCTCACGGTTGGGACCTCGAACGCGCTGTTTCTTCTTTTACTTCCACCACTTCGGAATCCTCTGCTTCTGCCGCCGCTGATGATGGTGGTGGCGACGCACATTTGGACCCTGCGACGCGACAAATGCTCGAGAGATCGGAACCGCAACAAAATGCCGCTCCGCCCCCGAGTTTTGCTTGGAAAATCATCACGCTTCCGATTTCTGTGATTTCTGGTAGTTTAGGGCTTGTTTCGGGTGCTATTGGTCTGGGATTATGGGCTGCTGGTGGTATTCTTTCGTATTCTCTTGGTGTGATTGGTCTGGGGTCCGGCTCTGGCCGGAACGGTGAGTCGTCGGCTCGGTTGGTTTCTGTTTCTGCTGCTACATCGGAGGCTGTTGATTTTGTGTCCGCGTTTGAGAGGGATTTTGGGACGACCAGACCGAATTTTGTGGGGGAAGGGTTCATGGACTCGTTGCAGCGTTCTAGGAATGCCTTCAAGCTTTTGTTTGTTTACTTGCACTCTCCTGATCATCCGGATACGCCGTTGTTCTGCGAGAGGACCTTGTGTTCGGAGACTGTTGCAGCGTTTGTGAATGAGAACTTTGTTTCGTGGGGAGGGAGTATTCGGGCCAGTGAAGGTTTTAAGATGAGTAATAGCTTGAAAGCTTCAAGGTACCCTTTTTGTGCTGTGGTTATGGCAGCTACAAATCAGAGGATCGCACTGCTTCAGCAGGTATTCTTATTTTCTTTCAACATCGACTTCTCAGTTTCATTACTATAAACAAACTAATTTCATTGGATAAATGGACTGGCAAAAAGGGAGGACAGGCATCCCCAATCTAAGGAACGTTAATAGAAATATCTTCGAAGTGACAATGATTACTTATGTTGTAGTTACGATAGGGCCATAGAATTTACACGAGAACCTCGAAAAGGAGAGAATCAAAAGACTCTTCTTTCTTGTTGAAGACTTGTTCTTTATTTGTACCCGTAAGTGCAAAAAAGCTTTAAAATGTGGTAGCCAAATGATTTTCCTCTCTTCTAAGGATGATCACCAAGAACCAAGAGAAAAATCTGTTCATGTTGATTGACTTCTTATGATATCAATTTTGCTATGAATTTTGTAATATGAGCAGCTTCTCTATGCATATTTTCATTGGAAGATGGAAACCTCAAACATTATAGTTATGTTACGTGGAAAGCTTACTTGAGTTTCTGCTGGTGAGATTTAATTCTGGCATGTGATCTTGAAATCCACATTCTGAATGACCTTTGGTATATTCATTTGTTATTAGTTTTGCGAGAGAAATGTCGACTCATGAATAGATTTTTGGTGATATGCAAGTGGGCTTGTAGATCTCCCCCTCTGAACTTACTAGGTCAAAATACGTGGCTTCATCACTATAATTTTCTTCTGATGATGGATGAGCAGTGAGAAGTGGAAAGGGAAAACCCCCCCTTAAGGATGGCCATTTAACAGGTTCGTGGTGAAGCTTAA

mRNA sequence

GAGATTAAAATAGATTTATTTAAAAAACAGAATTATTTTACTTCGACGCGTTTCACCGGGGTATGATCAGCATCTCATCTTTTGTGACGATTGATCGAGAGAGGGCGAAGAAGAAGATTTGAGGCCGATCATTCTCCGAGGAATTTGAAACGAGACGAACGAAAGAGACCCACAAAATTCTTCCATTCATTTTTGTCCTTGCCGGATATGGTTGATGTTGCTGATAAATTAGCCTATTTCCAAGCGATTACAGGCTTAGAAGATCCCGAAATCTGCACCGAAATCCTTTCCGCTCACGGTTGGGACCTCGAACGCGCTGTTTCTTCTTTTACTTCCACCACTTCGGAATCCTCTGCTTCTGCCGCCGCTGATGATGGTGGTGGCGACGCACATTTGGACCCTGCGACGCGACAAATGCTCGAGAGATCGGAACCGCAACAAAATGCCGCTCCGCCCCCGAGTTTTGCTTGGAAAATCATCACGCTTCCGATTTCTGTGATTTCTGGTAGTTTAGGGCTTGTTTCGGGTGCTATTGGTCTGGGATTATGGGCTGCTGGTGGTATTCTTTCGTATTCTCTTGGTGTGATTGGTCTGGGGTCCGGCTCTGGCCGGAACGGTGAGTCGTCGGCTCGGTTGGTTTCTGTTTCTGCTGCTACATCGGAGGCTGTTGATTTTGTGTCCGCGTTTGAGAGGGATTTTGGGACGACCAGACCGAATTTTGTGGGGGAAGGGTTCATGGACTCGTTGCAGCGTTCTAGGAATGCCTTCAAGCTTTTGTTTGTTTACTTGCACTCTCCTGATCATCCGGATACGCCGTTGTTCTGCGAGAGGACCTTGTGTTCGGAGACTGTTGCAGCGTTTGTGAATGAGAACTTTGTTTCGTGGGGAGGGAGTATTCGGGCCAGTGAAGGTTTTAAGATGAGTAATAGCTTGAAAGCTTCAAGGTACCCTTTTTGTGCTGTGGTTATGGCAGCTACAAATCAGAGGATCGCACTGCTTCAGCAGGTTCGTGGTGAAGCTTAA

Coding sequence (CDS)

ATGGTTGATGTTGCTGATAAATTAGCCTATTTCCAAGCGATTACAGGCTTAGAAGATCCCGAAATCTGCACCGAAATCCTTTCCGCTCACGGTTGGGACCTCGAACGCGCTGTTTCTTCTTTTACTTCCACCACTTCGGAATCCTCTGCTTCTGCCGCCGCTGATGATGGTGGTGGCGACGCACATTTGGACCCTGCGACGCGACAAATGCTCGAGAGATCGGAACCGCAACAAAATGCCGCTCCGCCCCCGAGTTTTGCTTGGAAAATCATCACGCTTCCGATTTCTGTGATTTCTGGTAGTTTAGGGCTTGTTTCGGGTGCTATTGGTCTGGGATTATGGGCTGCTGGTGGTATTCTTTCGTATTCTCTTGGTGTGATTGGTCTGGGGTCCGGCTCTGGCCGGAACGGTGAGTCGTCGGCTCGGTTGGTTTCTGTTTCTGCTGCTACATCGGAGGCTGTTGATTTTGTGTCCGCGTTTGAGAGGGATTTTGGGACGACCAGACCGAATTTTGTGGGGGAAGGGTTCATGGACTCGTTGCAGCGTTCTAGGAATGCCTTCAAGCTTTTGTTTGTTTACTTGCACTCTCCTGATCATCCGGATACGCCGTTGTTCTGCGAGAGGACCTTGTGTTCGGAGACTGTTGCAGCGTTTGTGAATGAGAACTTTGTTTCGTGGGGAGGGAGTATTCGGGCCAGTGAAGGTTTTAAGATGAGTAATAGCTTGAAAGCTTCAAGGTACCCTTTTTGTGCTGTGGTTATGGCAGCTACAAATCAGAGGATCGCACTGCTTCAGCAGGTTCGTGGTGAAGCTTAA
Homology
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BLAST of CmoCh02G009430 vs. Swiss-Prot
Match: PUX10_ARATH (Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana GN=PUX10 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-92
Identity = 188/288 (65.28%), Postives = 221/288 (76.74%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGG- 60
           MVD  DKL YFQAITGLED ++CTEIL AHGWDLE A+SSFTS  S+  AS++A DGGG 
Sbjct: 1   MVDTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAISSFTS--SDQDASSSAVDGGGN 60

Query: 61  --DAHLDPAT-------------RQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGL 120
             D   + AT              +++ R +   N  P    AW+IITLPIS++SGSLGL
Sbjct: 61  NRDHDHNNATVTPDYPPRGIVDDTELVMRDDGGGNRGP--GVAWRIITLPISIVSGSLGL 120

Query: 121 VSGAIGLGLWAAGGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDF 180
           VSGAIGLG+WAAGG+LSYSLG++G  SG G  G  SARLVSVS+A  EA++FV+ F+RD+
Sbjct: 121 VSGAIGLGIWAAGGVLSYSLGMLGFRSGRG-GGSESARLVSVSSAVGEAMEFVALFDRDY 180

Query: 181 GTTRP---NFVGEGFMDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNE 240
           G+      +FV EGFMD+LQRSR++FKLLFVYLHSPDHPDTP+FC  TLC+E V AFVNE
Sbjct: 181 GSNNAFKIDFVVEGFMDALQRSRSSFKLLFVYLHSPDHPDTPVFCGGTLCNEAVVAFVNE 240

Query: 241 NFVSWGGSIRASEGFKMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           NFVSWGGSIR+SEGFKMSNSLKASR+PFCAVVM A NQRIALLQQV G
Sbjct: 241 NFVSWGGSIRSSEGFKMSNSLKASRFPFCAVVMPAANQRIALLQQVEG 283

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BLAST of CmoCh02G009430 vs. Swiss-Prot
Match: FAF2B_XENLA (FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.4e-16
Identity = 41/124 (33.06%), Postives = 67/124 (54.03%), Query Frame = 1 

Query: 146 VSAATSEAVDFVSAFERDFGTTRPNFVGEGFMDSLQRSRNAFKLLFVYLHSPDHPDTPLF 205
           V+    + V F+  FE  +G+T P F    +  +L  ++   + L VYLH  DH D+  F
Sbjct: 129 VTDPVGDVVSFIHLFEEKYGSTHPVFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDF 188

Query: 206 CERTLCSETVAAFVNENFVSWGGSIRASEGFKMSNSLKASRYPFCAVVMAATNQRIALLQ 265
           C  TLC+  V  F+N   + W  S    EGF++S +L  S YPF A++M   ++R+ ++ 
Sbjct: 189 CRNTLCTSEVTHFINSRMLFWACSSNKPEGFRVSQALHESTYPFLAMIM-LKDRRMTVVG 248

Query: 266 QVRG 270
           ++ G
Sbjct: 249 RLEG 251

[Close]
BLAST of CmoCh02G009430 vs. Swiss-Prot
Match: FAF2A_XENLA (FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.3e-15
Identity = 64/265 (24.15%), Postives = 113/265 (42.64%), Query Frame = 1 

Query: 6   DKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGGDAHLDP 65
           +KL  FQ +TG+E  + C + L  H W++E AV    +            +G      +P
Sbjct: 15  EKLLQFQDLTGIESMDQCRQTLQQHNWNIEAAVQDRLNE----------QEGVPRVFNNP 74

Query: 66  ATRQMLERSEPQQNAAPPPSFAWKIIT-LPISVISGSLGLVSGAIGLGLWAAGGILSYSL 125
             R +      Q N A    +++ +    P  ++     L+     +  +    I  ++L
Sbjct: 75  PNRPL------QVNTADHRVYSYVVSRPQPRGLLGWGYYLIMLPFRITYYTLLDIFRFTL 134

Query: 126 GVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGFMDSLQRSR 185
             I     S            V+    + V F+  FE  +G   P F    +  +L  ++
Sbjct: 135 RFIRPDPRS-----------RVTDPVGDVVSFIHLFEEKYGRIHPVFYQGTYSQALNDAK 194

Query: 186 NAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGFKMSNSLKA 245
              + L VYLH  DH D+  FC  TLC+  V  F+N   + W  S    EGF++S +L+ 
Sbjct: 195 QELRFLLVYLHGEDHQDSDDFCRNTLCTPEVTHFINSRMLFWACSTNKPEGFRVSQALRE 251

Query: 246 SRYPFCAVVMAATNQRIALLQQVRG 270
           + YPF  ++M   ++R+ ++ ++ G
Sbjct: 255 NTYPFLGMIM-LKDRRMTVVGRLEG 251

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BLAST of CmoCh02G009430 vs. Swiss-Prot
Match: FAF2_XENTR (FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.3e-15
Identity = 39/124 (31.45%), Postives = 65/124 (52.42%), Query Frame = 1 

Query: 146 VSAATSEAVDFVSAFERDFGTTRPNFVGEGFMDSLQRSRNAFKLLFVYLHSPDHPDTPLF 205
           V+    + V F+  FE  +G   P F    +  +L  ++   + L VYLH  DH D+  F
Sbjct: 129 VTDPVGDVVSFIQLFEEKYGRIHPVFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDF 188

Query: 206 CERTLCSETVAAFVNENFVSWGGSIRASEGFKMSNSLKASRYPFCAVVMAATNQRIALLQ 265
           C  TLC   V  F+N   + W  S    EGF++S +L+ + YPF A++M   ++R+ ++ 
Sbjct: 189 CRNTLCIPEVTNFLNSRMLFWACSTNKPEGFRVSQALRENTYPFLAMIM-LKDRRMTVVG 248

Query: 266 QVRG 270
           ++ G
Sbjct: 249 RLEG 251

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BLAST of CmoCh02G009430 vs. Swiss-Prot
Match: FAF2_HUMAN (FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 4.1e-14
Identity = 63/265 (23.77%), Postives = 113/265 (42.64%), Query Frame = 1 

Query: 6   DKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGGDAHLDP 65
           +KL  FQ +TG+E  + C   L  H W++E AV    +            +G       P
Sbjct: 15  EKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNE----------QEGVPSVFNPP 74

Query: 66  ATRQMLERSEPQQNAAPPPSFAWKIIT-LPISVISGSLGLVSGAIGLGLWAAGGILSYSL 125
            +R +      Q N A    +++ +    P  ++     L+        +    I  ++L
Sbjct: 75  PSRPL------QVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFAL 134

Query: 126 GVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGFMDSLQRSR 185
             I     S            V+    + V F+ +FE  +G   P F    +  +L  ++
Sbjct: 135 RFIRPDPRS-----------RVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAK 194

Query: 186 NAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGFKMSNSLKA 245
              + L VYLH  DH D+  FC  TLC+  V + +N   + W  S    EG+++S +L+ 
Sbjct: 195 RELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRE 251

Query: 246 SRYPFCAVVMAATNQRIALLQQVRG 270
           + YPF A++M   ++R+ ++ ++ G
Sbjct: 255 NTYPFLAMIM-LKDRRMTVVGRLEG 251

[Close]
BLAST of CmoCh02G009430 vs. TrEMBL
Match: F6HU62_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02340 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.4e-108
Identity = 208/273 (76.19%), Postives = 235/273 (86.08%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTS---ESSASAAADDG 60
           MVDVADKLAYFQAITGLEDP++C+EIL+AHGWDLE A+SSFT T S   ESSA+ AAD  
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCSEILAAHGWDLELAISSFTVTNSDRPESSATVAADVA 60

Query: 61  G-GDAHLDPATRQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAA 120
             G +       ++L+ SE       PP  AWK+ITLPISVISGSLGL+SGAIGLG+WAA
Sbjct: 61  EVGRSEQSSEELRLLQISETMGGVVAPPGLAWKLITLPISVISGSLGLISGAIGLGMWAA 120

Query: 121 GGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGF 180
           GG+LSYSL +IGLGSGSGRNG+SS+ LVSVSAA +EA+DFV++FE+D+G TRPNFV EGF
Sbjct: 121 GGVLSYSLSMIGLGSGSGRNGDSSSPLVSVSAAGAEAMDFVASFEKDYGATRPNFVTEGF 180

Query: 181 MDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGF 240
           MD LQ SRNAFKLLFVYLHSPDHPDTPLFCERTLCSE +AAF+NENFVSWGG+IRASEGF
Sbjct: 181 MDGLQLSRNAFKLLFVYLHSPDHPDTPLFCERTLCSEPLAAFINENFVSWGGNIRASEGF 240

Query: 241 KMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           KMSNSLKASR+PFCAVVMAATNQRIALLQQV G
Sbjct: 241 KMSNSLKASRFPFCAVVMAATNQRIALLQQVEG 273

[Close]
BLAST of CmoCh02G009430 vs. TrEMBL
Match: A0A061G2X5_THECC (UBX domain-containing protein OS=Theobroma cacao GN=TCM_015675 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.4e-106
Identity = 205/273 (75.09%), Postives = 233/273 (85.35%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGGD 60
           MVDVADKLAYFQAITGLEDP++CTEIL AHGWDLE A+SSFTS    S+++A +D     
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCTEILQAHGWDLELAISSFTSANQNSASTANSDS---- 60

Query: 61  AHLDPATRQMLERSEPQQN----AAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAA 120
              +P  R+ L R+E        AAP P  AWK+ITLPISVISGS+GL+SGA+GLGLWAA
Sbjct: 61  ---EP--RESLNRTESASGSGLVAAPSPGLAWKLITLPISVISGSIGLISGAVGLGLWAA 120

Query: 121 GGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGF 180
           GG+LSYSLG+IGL  GSGR GESSARLVSVSAA SEA+DFV+AFER++GT RPNFVGEGF
Sbjct: 121 GGVLSYSLGMIGL--GSGRGGESSARLVSVSAAASEAMDFVAAFEREYGTRRPNFVGEGF 180

Query: 181 MDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGF 240
           MD+LQRSRNAFKLLFVYLHSP+HPD+P+FCE+TLCSE V +FVNENFV+WGGSIRASEGF
Sbjct: 181 MDALQRSRNAFKLLFVYLHSPEHPDSPVFCEQTLCSEAVGSFVNENFVAWGGSIRASEGF 240

Query: 241 KMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           KMSNS KASR+PFCAVVM ATNQRIALLQQV G
Sbjct: 241 KMSNSFKASRFPFCAVVMPATNQRIALLQQVEG 262

[Close]
BLAST of CmoCh02G009430 vs. TrEMBL
Match: A0A067JMP6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20392 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 3.2e-106
Identity = 205/282 (72.70%), Postives = 235/282 (83.33%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSE--------SSASA 60
           MVDVADKLAYFQAITGLEDP++CTEIL AHGWDLE A+S+FTS  +         S+ +A
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCTEILQAHGWDLELAISAFTSNNNNNENDSNAVSTTTA 60

Query: 61  AADDGGGDA--HLDPATRQMLERSEPQQNA--APPPSFAWKIITLPISVISGSLGLVSGA 120
           +A D G  A   L+ A+R   +RS+    A  A  P  AWK+ITLP SVISGSLGL+SGA
Sbjct: 61  SATDTGSSAVETLNSASRDAFDRSDSGAGAVAAAAPGLAWKLITLPFSVISGSLGLISGA 120

Query: 121 IGLGLWAAGGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTR 180
           +GLGLWAAGGILSYSLG++GLGS +GRNGESS RLVSVSAA  EA++FVS FER++G+ R
Sbjct: 121 VGLGLWAAGGILSYSLGMVGLGSSAGRNGESSTRLVSVSAAAREAMEFVSVFEREYGSRR 180

Query: 181 PNFVGEGFMDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGG 240
           PNFV EGFMD+LQRSRNA+KLLFVYLHSPDHPDTP+FCERTLCS+  +AFVNENFV+WGG
Sbjct: 181 PNFVTEGFMDALQRSRNAYKLLFVYLHSPDHPDTPMFCERTLCSDVFSAFVNENFVAWGG 240

Query: 241 SIRASEGFKMSNSLKASRYPFCAVVMAATNQRIALLQQVRGE 271
           SIRASEGFKMSNSLKASRYPFCAVVM ATNQRIALLQQV G+
Sbjct: 241 SIRASEGFKMSNSLKASRYPFCAVVMPATNQRIALLQQVEGQ 282

[Close]
BLAST of CmoCh02G009430 vs. TrEMBL
Match: W9S3Z8_9ROSA (FAS-associated factor 2-B OS=Morus notabilis GN=L484_003645 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.2e-105
Identity = 206/277 (74.37%), Postives = 231/277 (83.39%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSE-------SSASAA 60
           MVDVADKLAYFQAITGLEDP++CT+IL+AHGWDLE A+SSFTS  ++       +  S+ 
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCTDILAAHGWDLELAISSFTSNNADPPPEEPIAGTSST 60

Query: 61  ADDGGGDAHLDPATRQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGLVSGAIGLGL 120
           AD        + ++    +R E   NA  PP  AWK++TLPIS+ISGSLGLVSGAIGLGL
Sbjct: 61  ADTVSAIQPREASS----QRPESVPNAVGPPGLAWKLVTLPISIISGSLGLVSGAIGLGL 120

Query: 121 WAAGGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFG-TTRPNFV 180
           WAAGG+LSYSLG+IGL SGSGR GESS RLV VSAA SEA++FV+ FERD+G  TRPNFV
Sbjct: 121 WAAGGVLSYSLGMIGLNSGSGRGGESSERLVPVSAAASEAMEFVAGFERDYGGRTRPNFV 180

Query: 181 GEGFMDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRA 240
            EGFMD+LQRSRN FKLLFVYLHSPDHPDTPLFCERTLCSE +AAFVNENFV+WGGSIRA
Sbjct: 181 SEGFMDALQRSRNEFKLLFVYLHSPDHPDTPLFCERTLCSEVLAAFVNENFVAWGGSIRA 240

Query: 241 SEGFKMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           SEGFKMSNSLKASRYPFCAVVMAATNQRIALLQQV G
Sbjct: 241 SEGFKMSNSLKASRYPFCAVVMAATNQRIALLQQVEG 273

[Close]
BLAST of CmoCh02G009430 vs. TrEMBL
Match: A0A0B0PTJ6_GOSAR (FAS-associated factor 2-B OS=Gossypium arboreum GN=F383_08083 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-105
Identity = 204/269 (75.84%), Postives = 229/269 (85.13%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGGD 60
           MVDVADKLAYFQAITGLEDP++CTEIL AHGWDLE A+SSFTS+T  S++S  +D    D
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCTEILQAHGWDLELAISSFTSSTQPSASSTVSDSDPPD 60

Query: 61  AHLDPATRQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAAGGIL 120
           +    A       S P    AP P  AW+++TLPISVISGSLGL+SGA+GLGLWAAGG+L
Sbjct: 61  SR---ARTDSASASGPI--TAPAPGLAWRLVTLPISVISGSLGLISGAVGLGLWAAGGVL 120

Query: 121 SYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGFMDSL 180
           SYSLG+IGLGSG G  GESSA LVSVSAA SEA+DFV+AFER++GT  PNFVGEGFMD+L
Sbjct: 121 SYSLGMIGLGSGQG--GESSAGLVSVSAAASEAMDFVAAFEREYGTRGPNFVGEGFMDAL 180

Query: 181 QRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGFKMSN 240
           QRSRNAFKLLFVYLHSPDHPD+P+FCERTLCSE +A FVNENFV+WGGSIRASEGFKMSN
Sbjct: 181 QRSRNAFKLLFVYLHSPDHPDSPVFCERTLCSEALAPFVNENFVAWGGSIRASEGFKMSN 240

Query: 241 SLKASRYPFCAVVMAATNQRIALLQQVRG 270
           SLKASR+PFCAVVM ATNQRIALLQQV G
Sbjct: 241 SLKASRFPFCAVVMPATNQRIALLQQVEG 262

[Close]
BLAST of CmoCh02G009430 vs. TAIR10
Match: AT4G10790.1 (AT4G10790.1 UBX domain-containing protein)

HSP 1 Score: 340.9 bits (873), Expect = 7.3e-94
Identity = 188/288 (65.28%), Postives = 221/288 (76.74%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGG- 60
           MVD  DKL YFQAITGLED ++CTEIL AHGWDLE A+SSFTS  S+  AS++A DGGG 
Sbjct: 1   MVDTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAISSFTS--SDQDASSSAVDGGGN 60

Query: 61  --DAHLDPAT-------------RQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGL 120
             D   + AT              +++ R +   N  P    AW+IITLPIS++SGSLGL
Sbjct: 61  NRDHDHNNATVTPDYPPRGIVDDTELVMRDDGGGNRGP--GVAWRIITLPISIVSGSLGL 120

Query: 121 VSGAIGLGLWAAGGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDF 180
           VSGAIGLG+WAAGG+LSYSLG++G  SG G  G  SARLVSVS+A  EA++FV+ F+RD+
Sbjct: 121 VSGAIGLGIWAAGGVLSYSLGMLGFRSGRG-GGSESARLVSVSSAVGEAMEFVALFDRDY 180

Query: 181 GTTRP---NFVGEGFMDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNE 240
           G+      +FV EGFMD+LQRSR++FKLLFVYLHSPDHPDTP+FC  TLC+E V AFVNE
Sbjct: 181 GSNNAFKIDFVVEGFMDALQRSRSSFKLLFVYLHSPDHPDTPVFCGGTLCNEAVVAFVNE 240

Query: 241 NFVSWGGSIRASEGFKMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           NFVSWGGSIR+SEGFKMSNSLKASR+PFCAVVM A NQRIALLQQV G
Sbjct: 241 NFVSWGGSIRSSEGFKMSNSLKASRFPFCAVVMPAANQRIALLQQVEG 283

[Close]
BLAST of CmoCh02G009430 vs. NCBI nr
Match: gi|659074125|ref|XP_008437435.1| (PREDICTED: FAS-associated factor 2 [Cucumis melo])

HSP 1 Score: 468.0 bits (1203), Expect = 1.1e-128
Identity = 242/271 (89.30%), Postives = 253/271 (93.36%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGG- 60
           MVDVADKLAYFQAITGLEDPEICTEIL+AHGWDLE AVSSFT T SESSASAAAD GGG 
Sbjct: 6   MVDVADKLAYFQAITGLEDPEICTEILAAHGWDLELAVSSFTGTNSESSASAAADGGGGG 65

Query: 61  -DAHLDPATRQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAAGG 120
            DAH DP TR++L+R E Q+NAAP PS AWKIITLPISVISGSLGLVSGA+GLGLWAAGG
Sbjct: 66  GDAHFDPPTREILDRPEHQENAAPAPSLAWKIITLPISVISGSLGLVSGAVGLGLWAAGG 125

Query: 121 ILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGFMD 180
           ILSYSLGV+G GSGSGRN ESSARLVSVSAA SEA+DFVSAFERD+G  RP+FVGEGFMD
Sbjct: 126 ILSYSLGVVGFGSGSGRNAESSARLVSVSAAASEAIDFVSAFERDYGMIRPSFVGEGFMD 185

Query: 181 SLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGFKM 240
           +LQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGFKM
Sbjct: 186 ALQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGFKM 245

Query: 241 SNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           SNSLKASRYPFCAVVMAATNQRIALLQQV G
Sbjct: 246 SNSLKASRYPFCAVVMAATNQRIALLQQVEG 276

[Close]
BLAST of CmoCh02G009430 vs. NCBI nr
Match: gi|225426641|ref|XP_002281109.1| (PREDICTED: FAS-associated factor 2 [Vitis vinifera])

HSP 1 Score: 399.4 bits (1025), Expect = 4.9e-108
Identity = 208/273 (76.19%), Postives = 235/273 (86.08%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTS---ESSASAAADDG 60
           MVDVADKLAYFQAITGLEDP++C+EIL+AHGWDLE A+SSFT T S   ESSA+ AAD  
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCSEILAAHGWDLELAISSFTVTNSDRPESSATVAADVA 60

Query: 61  G-GDAHLDPATRQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAA 120
             G +       ++L+ SE       PP  AWK+ITLPISVISGSLGL+SGAIGLG+WAA
Sbjct: 61  EVGRSEQSSEELRLLQISETMGGVVAPPGLAWKLITLPISVISGSLGLISGAIGLGMWAA 120

Query: 121 GGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGF 180
           GG+LSYSL +IGLGSGSGRNG+SS+ LVSVSAA +EA+DFV++FE+D+G TRPNFV EGF
Sbjct: 121 GGVLSYSLSMIGLGSGSGRNGDSSSPLVSVSAAGAEAMDFVASFEKDYGATRPNFVTEGF 180

Query: 181 MDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGF 240
           MD LQ SRNAFKLLFVYLHSPDHPDTPLFCERTLCSE +AAF+NENFVSWGG+IRASEGF
Sbjct: 181 MDGLQLSRNAFKLLFVYLHSPDHPDTPLFCERTLCSEPLAAFINENFVSWGGNIRASEGF 240

Query: 241 KMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           KMSNSLKASR+PFCAVVMAATNQRIALLQQV G
Sbjct: 241 KMSNSLKASRFPFCAVVMAATNQRIALLQQVEG 273

[Close]
BLAST of CmoCh02G009430 vs. NCBI nr
Match: gi|1009156649|ref|XP_015896351.1| (PREDICTED: plant UBX domain-containing protein 10 [Ziziphus jujuba])

HSP 1 Score: 394.4 bits (1012), Expect = 1.6e-106
Identity = 205/274 (74.82%), Postives = 230/274 (83.94%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSE----SSASAAADD 60
           MVDVADKLAYFQAITGLEDP++CTEIL+AHGWDLE A+SSFT + S     + A  ++  
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCTEILAAHGWDLELAISSFTGSNSNPPDNTVAGTSSTG 60

Query: 61  GGGDAHLDPATRQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAA 120
            GG A       Q+ ++ EP  N    P  AWK++TLP+SVISGSLGL+SGAIGLGLWAA
Sbjct: 61  EGGAAGRSVLGSQVSQQMEPVYNPPASPGLAWKLVTLPVSVISGSLGLISGAIGLGLWAA 120

Query: 121 GGILSYSLGVIGLGSGSGRNGESSA-RLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEG 180
           GG+LSYSLG+ GLGSG GR+GESS   LVSVSAA SEA++FVS FERD+GTTRPNFV EG
Sbjct: 121 GGVLSYSLGMFGLGSGLGRDGESSTPMLVSVSAAASEAMEFVSRFERDYGTTRPNFVSEG 180

Query: 181 FMDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEG 240
           FMD+LQRSRN FKLLFVYLHSPDHPDTPLFCERTLC+E +A FVNENFVSWGGSIRASEG
Sbjct: 181 FMDALQRSRNTFKLLFVYLHSPDHPDTPLFCERTLCTEALAEFVNENFVSWGGSIRASEG 240

Query: 241 FKMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           FKMSNSLKASR+PFCAVVMAATNQRIALLQQV G
Sbjct: 241 FKMSNSLKASRFPFCAVVMAATNQRIALLQQVEG 274

[Close]
BLAST of CmoCh02G009430 vs. NCBI nr
Match: gi|778708228|ref|XP_011656150.1| (PREDICTED: LOW QUALITY PROTEIN: FAS-associated factor 2 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 3.5e-106
Identity = 201/231 (87.01%), Postives = 212/231 (91.77%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGGD 60
           MVDVADKLAYFQAITGLEDPEICTEIL+AHGWDLE AVSSFT+T SESSASAAAD GGGD
Sbjct: 1   MVDVADKLAYFQAITGLEDPEICTEILAAHGWDLELAVSSFTATNSESSASAAADGGGGD 60

Query: 61  AHLDPATRQMLERSEPQQNAAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAAGGIL 120
           AH DP TR++L+R E Q+NAAP PS AWKIITLPISVISGSLGLVSGA+GLG WAAGGIL
Sbjct: 61  AHFDPPTREILDRPEHQENAAPAPSLAWKIITLPISVISGSLGLVSGAVGLGFWAAGGIL 120

Query: 121 SYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGFMDSL 180
           SYSLGVIG GSGSGRN ESSARLVSVSAA SEA+DFVSAFERD+G  RP+FVGEGFMD+L
Sbjct: 121 SYSLGVIGFGSGSGRNAESSARLVSVSAAASEAIDFVSAFERDYGMIRPSFVGEGFMDAL 180

Query: 181 QRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIR 232
           QRSRNAFKLLFVYLHSPDHPDTP FCERTLCSETVA FVNENFVS GGS R
Sbjct: 181 QRSRNAFKLLFVYLHSPDHPDTPFFCERTLCSETVAVFVNENFVSXGGSTR 231

[Close]
BLAST of CmoCh02G009430 vs. NCBI nr
Match: gi|590675392|ref|XP_007039435.1| (UBX domain-containing protein [Theobroma cacao])

HSP 1 Score: 393.3 bits (1009), Expect = 3.5e-106
Identity = 205/273 (75.09%), Postives = 233/273 (85.35%), Query Frame = 1 

Query: 1   MVDVADKLAYFQAITGLEDPEICTEILSAHGWDLERAVSSFTSTTSESSASAAADDGGGD 60
           MVDVADKLAYFQAITGLEDP++CTEIL AHGWDLE A+SSFTS    S+++A +D     
Sbjct: 1   MVDVADKLAYFQAITGLEDPDLCTEILQAHGWDLELAISSFTSANQNSASTANSDS---- 60

Query: 61  AHLDPATRQMLERSEPQQN----AAPPPSFAWKIITLPISVISGSLGLVSGAIGLGLWAA 120
              +P  R+ L R+E        AAP P  AWK+ITLPISVISGS+GL+SGA+GLGLWAA
Sbjct: 61  ---EP--RESLNRTESASGSGLVAAPSPGLAWKLITLPISVISGSIGLISGAVGLGLWAA 120

Query: 121 GGILSYSLGVIGLGSGSGRNGESSARLVSVSAATSEAVDFVSAFERDFGTTRPNFVGEGF 180
           GG+LSYSLG+IGL  GSGR GESSARLVSVSAA SEA+DFV+AFER++GT RPNFVGEGF
Sbjct: 121 GGVLSYSLGMIGL--GSGRGGESSARLVSVSAAASEAMDFVAAFEREYGTRRPNFVGEGF 180

Query: 181 MDSLQRSRNAFKLLFVYLHSPDHPDTPLFCERTLCSETVAAFVNENFVSWGGSIRASEGF 240
           MD+LQRSRNAFKLLFVYLHSP+HPD+P+FCE+TLCSE V +FVNENFV+WGGSIRASEGF
Sbjct: 181 MDALQRSRNAFKLLFVYLHSPEHPDSPVFCEQTLCSEAVGSFVNENFVAWGGSIRASEGF 240

Query: 241 KMSNSLKASRYPFCAVVMAATNQRIALLQQVRG 270
           KMSNS KASR+PFCAVVM ATNQRIALLQQV G
Sbjct: 241 KMSNSFKASRFPFCAVVMPATNQRIALLQQVEG 262

The following BLAST results are available for this feature:
BLAST of CmoCh02G009430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUX10_ARATH1.3e-9265.28Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana GN=PUX10 PE=2 SV=... [more]
FAF2B_XENLA3.4e-1633.06FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1[more]
FAF2A_XENLA8.3e-1524.15FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1[more]
FAF2_XENTR8.3e-1531.45FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1[more]
FAF2_HUMAN4.1e-1423.77FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2[more]
BLAST of CmoCh02G009430 vs. TrEMBL
Match NameE-valueIdentityDescription
F6HU62_VITVI3.4e-10876.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02340 PE=4 SV=... [more]
A0A061G2X5_THECC2.4e-10675.09UBX domain-containing protein OS=Theobroma cacao GN=TCM_015675 PE=4 SV=1[more]
A0A067JMP6_JATCU3.2e-10672.70Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20392 PE=4 SV=1[more]
W9S3Z8_9ROSA1.2e-10574.37FAS-associated factor 2-B OS=Morus notabilis GN=L484_003645 PE=4 SV=1[more]
A0A0B0PTJ6_GOSAR2.1e-10575.84FAS-associated factor 2-B OS=Gossypium arboreum GN=F383_08083 PE=4 SV=1[more]
BLAST of CmoCh02G009430 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10790.17.3e-9465.28 UBX domain-containing protein[more]
BLAST of CmoCh02G009430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074125|ref|XP_008437435.1|1.1e-12889.30PREDICTED: FAS-associated factor 2 [Cucumis melo][more]
gi|225426641|ref|XP_002281109.1|4.9e-10876.19PREDICTED: FAS-associated factor 2 [Vitis vinifera][more]
gi|1009156649|ref|XP_015896351.1|1.6e-10674.82PREDICTED: plant UBX domain-containing protein 10 [Ziziphus jujuba][more]
gi|778708228|ref|XP_011656150.1|3.5e-10687.01PREDICTED: LOW QUALITY PROTEIN: FAS-associated factor 2 [Cucumis sativus][more]
gi|590675392|ref|XP_007039435.1|3.5e-10675.09UBX domain-containing protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006577UAS
IPR012336Thioredoxin-like_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G009430.1CmoCh02G009430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006577UASSMARTSM0059445neu3coord: 155..270
score: 1.4
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 150..261
score: 2.91
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 6..41
score: 6.
NoneNo IPR availablePANTHERPTHR23322FAS-ASSOCIATED PROTEINcoord: 3..269
score: 4.0
NoneNo IPR availablePANTHERPTHR23322:SF1FAS-ASSOCIATED FACTOR 2coord: 3..269
score: 4.0
NoneNo IPR availablePFAMPF14555UBA_4coord: 6..43
score: 1.7