CmoCh02G008650 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTGTTGAGAAGGTTCCGAGAATTTTATTAATCCTGGTAAAATCAATCAGTTTGGGCTGATATTGTCGCAGCAATTATGTGTGTCCAAGATCCCTAATCCAACTTAGATACTATTTTGAACTCGATTGTTTATGCTTGGTGGTTGATCGAGTTTAAAGAATTCAAGTAAAACTGAAGACAAGAACTAATTCTGGCAAGAAAAGTCTGGCGTGTTTCTAGAAAATTACAGAGGGAGGGAGTAACTGAAATTCTCGACTATTAATCCATTACTTACCACACTTTCCATCCGGTTCAAAGGACAGCAGTTATTTTTTAATCTTTTAATTATTATGAATTCTCTTTAATGTTATGACTAATTTAGTAGGTTTGATTTGCCACCATAGCATAGTGGATCGAGCTCTTCGTACCGTCTCAAATATGGAAGTCCTGGACATAGATAGTTGAATTTCTCACCCTTGCAATTGTTGAAAAGGAGTTGGCTCAAGTGGTATTGGTTGAAAAGTTATAATCTTTTAGTTGACAAATCCTCTACAAATGGAGGGTGTAGGATTTTGTATTAGAATATTGGAAGCTATCTTGATTTTGAGTAAAGAAAGAATTCTTCTCTGAGTTCTTGGAGAGATTGATTATAGGCTCTTTCATATGATACCCAAAAGAGTTGAAGGCATTCAAAGAGGGAAATCCATCAACTTCCACCCCTTAGGCCTGAACCTTATTTTTTCTGGTGAATGTAAATACAATTACCGAGAGCTTTCATGAAAGATGTCAAGAACTTGGCAGATATTGACGATGAACAAAGCATAATTAACTCAAGGAAGGTCAGCATGGCATATTATGTGGAACGTTTCTGGTGGATCTTTATCCTATTTTGTTTCACATAAGTTCATTATTTAATTGTGAGGAAACCTTTTCAAGAAAAAGATTGTATTAAATTGGTTTAACTCAAGGAAGGTCAGCATGACATATTATGTGGAACTTTTCTGGTGGATCTTTATCCTATTTTGTTTCACATAAGTTCATTATTTAATTGTGAGGAAACCTTTTCAAGAAAAAGATTGTATTAAATTGGTTTAACTCAAGGAAGGTCAGCATGACATATATGTGGAACTTTTCTGGTGGATCTTTATCCTATTTTATTTCACAAAAGTTCATTACTCAATTGTGAGGAATCCTGGTATTAATGTTCTCTTTCCCCTTGTTCATAGGGATTGATTACCTGGTCTGAAATGAGCAAGTCTGAAGGAGATGAGAAGATCTTAAGCTACAATGATGTTGTACTCAGAAAAGCAGACTTAGACATCCTTAATGGTCCATGTTATCTGAATGATCGAATCATCGAGTTCTATTTTAGCTATCTATGCGCATGCCATCCTTCCGAGGACATCCTTCTATCTCCACCTTCAATTGCTTTCTGGATAATGAACTGCCCCGACACTGACGGTCTCAAGGATTTCCTACAACCACTCAATCTACTCGACAGGAATCTGGTAATCTTCCCAGTCAATGACAACAATGATGTTAGTAAAGCTGAAGGTGGAAACCACTGGAGTGTTCTTGTATTTTACAGAGAAGCAAACTTATTTGTTCATCATGATAGCTGCAAAGGGGTGAATAATTCCTCCGCCAAGCGACTGTACAGAGCTGTGGCTAGATTCATGGGTGTTACGAATTCGACATCCGAACCCAGTTATGTGGAATGCAGTGAGTCTCCTCAGCAAGTAAATGGACATGATTGTGGTTTGTATGTTACAGCCATATCAAGAAGTATATGCAGGTGGTATGAGCAGGAGAGGAAAGAGGTTGGTGGTGGAGATGGTTTTTTATGGTTTTCTGCAGTGGCGAAGGAGGTTACCCCATCTTTGGTTGCTGATATGCGTAGTGAAATCTTAGGGCTAATACGAAGTTTCATGGCTCTTAAGGAATACCAACCGGCTTCTAAATAACTCGCCGTTGTTAATTTTCCATATGGTTCGTTTCCCCTTTAGGGCCGCATTTGTGTTGCTAATGGACAATGTTTGCTCCCTCATTGACTCAATTTTGAAATGCATCGAAAATTCAGCTAAACCCCATTTTTTGGGGTGAATTTGATA GATTGTTGAGAAGGTTCCGAGAATTTTATTAATCCTGGTAAAATCAATCAGTTTGGGCTGATATTGTCGCAGCAATTATGTGTGTCCAAGATCCCTAATCCAACTTAGATACTATTTTGAACTCGATTGTTTATGCTTGGTGGTTGATCGAGTTTAAAGAATTCAAGTAAAACTGAAGACAAGAACTAATTCTGGCAAGAAAAGTCTGGCGTGTTTCTAGAAAATTACAGAGGGAGGGAGTAACTGAAATTCTCGACTATTAATCCATTACTTACCACACTTTCCATCCGGTTCAAAGGACAGCAGTTATTTTTTAATCTTTTAATTATTATGAATTCTCTTTAATGTTATGACTAATTTAGTAGGTTTGATTTGCCACCATAGCATAGTGGATCGAGCTCTTCGTACCGTCTCAAATATGGAAGTCCTGGACATAGATAGTTGAATTTCTCACCCTTGCAATTGTTGAAAAGGAGTTGGCTCAAGTGGTATTGGTTGAAAAGTTATAATCTTTTAGTTGACAAATCCTCTACAAATGGAGGGTGTAGGATTTTGTATTAGAATATTGGAAGCTATCTTGATTTTGAGTAAAGAAAGAATTCTTCTCTGAGTTCTTGGAGAGATTGATTATAGGCTCTTTCATATGATACCCAAAAGAGTTGAAGGCATTCAAAGAGGGAAATCCATCAACTTCCACCCCTTAGGCCTGAACCTTATTTTTTCTGGTGAATGTAAATACAATTACCGAGAGCTTTCATGAAAGATGTCAAGAACTTGGCAGATATTGACGATGAACAAAGCATAATTAACTCAAGGAAGGGATTGATTACCTGGTCTGAAATGAGCAAGTCTGAAGGAGATGAGAAGATCTTAAGCTACAATGATGTTGTACTCAGAAAAGCAGACTTAGACATCCTTAATGGTCCATGTTATCTGAATGATCGAATCATCGAGTTCTATTTTAGCTATCTATGCGCATGCCATCCTTCCGAGGACATCCTTCTATCTCCACCTTCAATTGCTTTCTGGATAATGAACTGCCCCGACACTGACGGTCTCAAGGATTTCCTACAACCACTCAATCTACTCGACAGGAATCTGGTAATCTTCCCAGTCAATGACAACAATGATGTTAGTAAAGCTGAAGGTGGAAACCACTGGAGTGTTCTTGTATTTTACAGAGAAGCAAACTTATTTGTTCATCATGATAGCTGCAAAGGGGTGAATAATTCCTCCGCCAAGCGACTGTACAGAGCTGTGGCTAGATTCATGGGTGTTACGAATTCGACATCCGAACCCAGTTATGTGGAATGCAGTGAGTCTCCTCAGCAAGTAAATGGACATGATTGTGGTTTGTATGTTACAGCCATATCAAGAAGTATATGCAGGTGGTATGAGCAGGAGAGGAAAGAGGTTGGTGGTGGAGATGGTTTTTTATGGTTTTCTGCAGTGGCGAAGGAGGTTACCCCATCTTTGGTTGCTGATATGCGTAGTGAAATCTTAGGGCTAATACGAAGTTTCATGGCTCTTAAGGAATACCAACCGGCTTCTAAATAACTCGCCGTTGTTAATTTTCCATATGGTTCGTTTCCCCTTTAGGGCCGCATTTGTGTTGCTAATGGACAATGTTTGCTCCCTCATTGACTCAATTTTGAAATGCATCGAAAATTCAGCTAAACCCCATTTTTTGGGGTGAATTTGATA ATGAAAGATGTCAAGAACTTGGCAGATATTGACGATGAACAAAGCATAATTAACTCAAGGAAGGGATTGATTACCTGGTCTGAAATGAGCAAGTCTGAAGGAGATGAGAAGATCTTAAGCTACAATGATGTTGTACTCAGAAAAGCAGACTTAGACATCCTTAATGGTCCATGTTATCTGAATGATCGAATCATCGAGTTCTATTTTAGCTATCTATGCGCATGCCATCCTTCCGAGGACATCCTTCTATCTCCACCTTCAATTGCTTTCTGGATAATGAACTGCCCCGACACTGACGGTCTCAAGGATTTCCTACAACCACTCAATCTACTCGACAGGAATCTGGTAATCTTCCCAGTCAATGACAACAATGATGTTAGTAAAGCTGAAGGTGGAAACCACTGGAGTGTTCTTGTATTTTACAGAGAAGCAAACTTATTTGTTCATCATGATAGCTGCAAAGGGGTGAATAATTCCTCCGCCAAGCGACTGTACAGAGCTGTGGCTAGATTCATGGGTGTTACGAATTCGACATCCGAACCCAGTTATGTGGAATGCAGTGAGTCTCCTCAGCAAGTAAATGGACATGATTGTGGTTTGTATGTTACAGCCATATCAAGAAGTATATGCAGGTGGTATGAGCAGGAGAGGAAAGAGGTTGGTGGTGGAGATGGTTTTTTATGGTTTTCTGCAGTGGCGAAGGAGGTTACCCCATCTTTGGTTGCTGATATGCGTAGTGAAATCTTAGGGCTAATACGAAGTTTCATGGCTCTTAAGGAATACCAACCGGCTTCTAAATAA
BLAST of CmoCh02G008650 vs. Swiss-Prot
Match: RUBP1_ARATH (NEDD8-specific protease 1 OS=Arabidopsis thaliana GN=NEDP1 PE=2 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 1.2e-69 Identity = 129/231 (55.84%), Postives = 166/231 (71.86%), Query Frame = 1
BLAST of CmoCh02G008650 vs. Swiss-Prot
Match: SENP8_DICDI (Probable sentrin-specific protease 8 OS=Dictyostelium discoideum GN=senp8 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.6e-26 Identity = 74/240 (30.83%), Postives = 126/240 (52.50%), Query Frame = 1
BLAST of CmoCh02G008650 vs. Swiss-Prot
Match: SENP8_HUMAN (Sentrin-specific protease 8 OS=Homo sapiens GN=SENP8 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 8.6e-25 Identity = 66/221 (29.86%), Postives = 120/221 (54.30%), Query Frame = 1
BLAST of CmoCh02G008650 vs. Swiss-Prot
Match: SENP8_RAT (Sentrin-specific protease 8 OS=Rattus norvegicus GN=Senp8 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.9e-22 Identity = 57/180 (31.67%), Postives = 101/180 (56.11%), Query Frame = 1
BLAST of CmoCh02G008650 vs. Swiss-Prot
Match: SENP8_MOUSE (Sentrin-specific protease 8 OS=Mus musculus GN=Senp8 PE=1 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 8.9e-22 Identity = 57/180 (31.67%), Postives = 100/180 (55.56%), Query Frame = 1
BLAST of CmoCh02G008650 vs. TrEMBL
Match: A0A0A0KEM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G289720 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 4.5e-97 Identity = 179/239 (74.90%), Postives = 203/239 (84.94%), Query Frame = 1
BLAST of CmoCh02G008650 vs. TrEMBL
Match: A0A151TN41_CAJCA (Sentrin-specific protease 8 OS=Cajanus cajan GN=KK1_022089 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 4.4e-84 Identity = 146/229 (63.76%), Postives = 185/229 (80.79%), Query Frame = 1
BLAST of CmoCh02G008650 vs. TrEMBL
Match: A0A0D2QBN9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G079500 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 6.3e-83 Identity = 147/229 (64.19%), Postives = 181/229 (79.04%), Query Frame = 1
BLAST of CmoCh02G008650 vs. TrEMBL
Match: W9SIH8_9ROSA (NEDD8-specific protease 1 OS=Morus notabilis GN=L484_011216 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.3e-83 Identity = 148/232 (63.79%), Postives = 187/232 (80.60%), Query Frame = 1
BLAST of CmoCh02G008650 vs. TrEMBL
Match: A0A0B2P8N4_GLYSO (NEDD8-specific protease 1 OS=Glycine soja GN=glysoja_024676 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 7.0e-82 Identity = 143/229 (62.45%), Postives = 179/229 (78.17%), Query Frame = 1
BLAST of CmoCh02G008650 vs. TAIR10
Match: AT5G60190.1 (AT5G60190.1 Cysteine proteinases superfamily protein) HSP 1 Score: 264.6 bits (675), Expect = 6.5e-71 Identity = 129/231 (55.84%), Postives = 166/231 (71.86%), Query Frame = 1
BLAST of CmoCh02G008650 vs. NCBI nr
Match: gi|659127786|ref|XP_008463889.1| (PREDICTED: NEDD8-specific protease 1 [Cucumis melo]) HSP 1 Score: 363.2 bits (931), Expect = 3.8e-97 Identity = 178/239 (74.48%), Postives = 204/239 (85.36%), Query Frame = 1
BLAST of CmoCh02G008650 vs. NCBI nr
Match: gi|449463679|ref|XP_004149559.1| (PREDICTED: NEDD8-specific protease 1 [Cucumis sativus]) HSP 1 Score: 362.5 bits (929), Expect = 6.5e-97 Identity = 179/239 (74.90%), Postives = 203/239 (84.94%), Query Frame = 1
BLAST of CmoCh02G008650 vs. NCBI nr
Match: gi|1012357278|gb|KYP68463.1| (Sentrin-specific protease 8 [Cajanus cajan]) HSP 1 Score: 319.3 bits (817), Expect = 6.3e-84 Identity = 146/229 (63.76%), Postives = 185/229 (80.79%), Query Frame = 1
BLAST of CmoCh02G008650 vs. NCBI nr
Match: gi|823229235|ref|XP_012447360.1| (PREDICTED: NEDD8-specific protease 1 [Gossypium raimondii]) HSP 1 Score: 315.5 bits (807), Expect = 9.1e-83 Identity = 147/229 (64.19%), Postives = 181/229 (79.04%), Query Frame = 1
BLAST of CmoCh02G008650 vs. NCBI nr
Match: gi|703159841|ref|XP_010112350.1| (NEDD8-specific protease 1 [Morus notabilis]) HSP 1 Score: 315.1 bits (806), Expect = 1.2e-82 Identity = 148/232 (63.79%), Postives = 187/232 (80.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |