CmoCh02G008340 (gene) Cucurbita moschata (Rifu)

NameCmoCh02G008340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr02 : 5066645 .. 5073127 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGGTTTTTATTTTTTGAGAGAGAAAGTGTTCAAAAAATGGGAGGAAGATGATTGCGACAAATGGTGGTCATAATTTAACCGACGCAGCAAAATTCTTGGACGGGAAAATTCACTGGGAATAATCATTTTGGAGGTCGGGTTAATTGGATTTGTCGAGACGGAAAGTGTTTTTGGCAGGGGAAGGAAGAAGAATTCGACAGGTAAATTTCTGAATACTTTTGAGTTAGGTTGTTATTAGAGTGATTAAAACTTAGAAATGTTGGTTCATAGTTATGATTGCCATGATTATAACCAAAAAGCAACACCCAATGTGCTTGAAAAACTCAACTCTGTGTCATAGGATTCTTAATCCCAGCTACCCAAGTAATCAAACCCCTTCCTGGGCTTTTTGATTGGTCGTTGTTGTTACTGTATTGATTGTTAGCATTTAGATTGGCTGTTTAGCAAAGAGGCAGAGTGCCCACTGAGGGGTATGAATTTTGGGGTGGCAAAGGAATGCCCGCCAAGTGTTTGATGAAAGTCCTCAATGAATTTTTAGTATAGGAGAAGGGTTGTTATTGCCATTTGTCAATGCGTAGGGGGGTAGCATGGTATAATGTAGTGTATGAAGACTGACGGCAGAGGGAGAGACGGGTGGTGGTGGTGGGCTGCATATTTTTGTGGCTGTCTGTTGTCTGTCTGTCTGTCTCTGCATATAAACTAACACGTTCAAAGCTCAAAAAGTCAATACATACTTTCATTCTGCTTTTACGAAATGATTAGATTTGGTGGGTGTCTCGGGAAAATATAAAAGAAAAAGGGGGGAGGGGAGAAAGGGGTAATAAAGAGTGGATATTTTTTAGACATAAAAGCTTGGTGAAGGAGACCACCGAACCGAAAAGACAGATGCAAAAGCAATCAATAGATTAGTGGACACAGAAAGTCAAAAACATCTTTTTTTTTTCCTTGGAATAAAATCATGGCCCTTGCAATCATATATTTGAATGCTTAGTATTTGCCAAAGGGGAAATGTTCTTTCCCCTCCATTTATTTCAATCTCCTCCTTCAATTTCTAAGTTTATATCCCATTTCATACTTCAAAAAACTACAATTATTCCTTGAGTTTATTGTTGTAATGATGTCATTAGTCTTATCTCTGTTAAAAAAACATGATTGATAGTAGTATTCACACGGTCAATTGTAATTGCATGCATTTATCAACATAAACATGTTTACACATTCCTTCATTGTTTTTTTTAGTCTTAGACTTTTAGAACTTTAATCTAGTGCTTCAAGTTTGAAAACTCTTAGTTATAAGCTAATAAAAATGAAACATAAAACCATTAATGGTCCATATGTCTTATATCATATCCTGAGCTGTGACTTCTACAACAGAGACTAAGGGAAGAGTTCAAAGAAGATTGAATGTTTGAATTAAAAGTCACGGACGGAAACAAAAGTTTAAAATGTTCTAGAACAAAAAAAAAAAAAAAAAAAAAAAAATCAGTTATTTGTTTAGAAACCGCATATTTAAATCTTGAACTATTTTTGGTATATATATATTAATGAACAGATCTATAGATGTTAAATTGTCCTTTAAAGTGAGGCAGCTATATAATATATTATAGAAATCCTTTTTCTGGTAAAGTCAAAATTATTTACTCTTTGTTTTTTAACCTTTTATGGAGTTCTTTTGAGAGAATATATTTTTTAAAAACAAATATTTTACAAAAGACTAGTTCTCAGACTAATTTGCATAAAACAAAGGTCATTTTGACTACCAAACATGCAAGCATGTCAAACAAGAAGCAAAAAGATGAATTTCTTTTCATCTATGTTACTGCAGTGTTGCTTGATTTACAATCTTTGTCTCTTTTCTTGTGGTTAGCGAGGAATTAGATGGGTCTGAGGAGTTTTCTGTAATAACAAATGGGTTTCTTAGTACACATTGTTCCCCACTTGAATATAATTTTCGAGAAACAAGTTGATTAGACAACTTTATATCAAGATGAAATCATATCTCAAGTCACAATGTTTCAAGCTAGCATAACTGATAGGCACCCTTTAACAAGAAAATATATATCTATACATGTGCCAGACAATTTGTGGATGATAATATATTTTAAAGAAACTACTTGCTGAGACAATATCTTATTTTAATAAGCAAATTAGATTTCAATTCAGCCGCTTCTGCGTCAGATAGCATAAACTCATTGTTAATTAAAAGTGTTCTTGACGGTGGGTTGGTTGGTAGTATCTAGAAAGAAGTTCAATTGAACGTGGAAAAATCAACCAATAGAAACATAATTCAGTGTCACCAGTCCTGATAAATACCATGTATGGCTCATAACTATATATTCTTCTGCTTTTCCTCGTTTCTGGTCACTGGAAAAATCATTGTAGATTGTGCTTTTCTGGTATCTGTTGGTGAAAGAGAAAAAAAGTGGTAATAAAGACAGAACAAAAAGATGGTATTGATTCCAAACATTATAACCTTTTCCTTTGTTTATCTGCCGATTAACAATCTAGCACTAGATACTATTGAATCAAATTCACCAACTTATGATGATCAAATATATATTGTGATGCCTTCTAATTAAACGAATCAATCAACCATCTAAATTCACCACACCACAATTCGGTTCCTTTCTCTAAACTCAAACTGAGACCGGGAGAGCACACTCTCATTGGACCATATTCAATGGGAATGTTTGGAAGGGATCGATGCTAAGAGCATCTCTTTCTCAGGGAGTCTTCCTTATAGTATTTAATAGACTTTAAAATCCCGAGACTAAGCAAATCTTAGAGAGTCGGGATATTCACTTTATAGAGATAGAAAATGTTTCTTCGTTAGTGGAAGCTCAGGTCAGGAGGACCAGGGAACAGGACTTTCGGATAAATATTACTATACTCATACGTAGAGTAACTTGTATGAATTCAAACTTCTAAGGATAAGTTTTCTACTGGAGATTATACCAGATTGGACTAACCTTCAGTTTCTCTTCTTCTTGTGCTGCTTGCCCAATTTTGATTTCCTTTGCTTGAACAAATGTAGGTACAGTTTCAAGAAAAATAGTGGGTAGACAAAAAGCAGAACCTGAACAACGATATTAGATTTGAGGATAAGTTTTACATCTGGAGTGGTCTCATTTTCAGGTAAAATGAATAATTTCCTAGAATGATCTCCCGAGTGAGCATACCTTGATGGCATTGTAATAGCTGAAGGGAAGGTAACCGAAGGCATCTGCATAGAGGTTGTTCTTTATCATAAAAGGAATTGCTTGGTACATGAGCCACACTGCACAAATGCTTCTAATAAGTTTACCCATGAACTTTTCCTTGATAAAATAGAACATTAGTTTTTGTTCTGTGAATCACTCACAGTAAACTATACAAGTAAAAACATAATCTTGGTAATGAGAAGAGGGGATGTTCAGCTCATGGTTTCGATTAGTACGGGAAGCTCGGGTTATATACCGGTATTTAGATTGCATAGAGGAATAAAATCTAGAAACCAAGGTTTATGTAGCATATATTTCGTTCCTTGGCTTGTGATATCTGAAAATATATGGTTTCTGATTGTATTTAAGAAGCTTGGGTTTATATAGCTAGTAGAAAAGATAGCACACCTTTGCCCAGCTCCACAAACACTAGACTATACAAACCCAACCTGTGAACTAAGCACTCCCTTAGATATCAAGTTATAGAAATCAAGATAAATTGGATACTGTGTACTCACTTTCACCAATTGTCACTCCAATTGGATAGAGAATTATGAAGGCAGTGTACCTAGAAGAAACAATAACACAAATTTAAGTATTACAAGTATTTTTCTAATCTTGAGTACATGAAGAACTTTGGAAGAACATTCCGGCAGTACCTAAGATATGTAAGCCAAAATAGGCTAACTCCCAAGCAATTCAAAGCATGATGAGAATATCTGATGACCTGAATCCATTTCATCACAGTAAAAATCCAGAAACCCAATTGGAAAACAAATCTTAAAGGAAAAAGGAAAGAATTTACCTCAGATAAGCTCCAAGCCAGGAAAGTGATGAAAACAGAAGGCAACTGTTGAACCTGTCAAACAAAAAGAAAGAATTATGAAGAACTCCAACAAGGATAAAAAAAAATGCAACGAAATGAGGAGAGAAACCTCGTGAAGTTGACGAACAACTGCAACCAGAAAATGAACCCTCCCGCCCCATTGCATTAGAGGAAGCAACACTCCAGTTGGCACCAAGCCTGAAATTTAAAGGGGAAAACACTACATTATCAAAATTTAGATACCAAACAAGAGAATGATACCAAAGTTCGTTTAAATTACCAATAGCTCCATGAATAATTTCCAAGAATGCAGCAGTTTGCAGGAAACCTTTGAAGAAAAAGGAAAGCTTTCAACATTTTCTATCAGATTCTACAAACTTTTCAAGGAACCAAACAAATGGGTTGAAACTTACAGATAAGTTCTCCCGCAGAAGAGTAAGCACCACTAGTAGATTTGGTGGCTACAAAACTGTCTAGAAGTCTGTAAAGAGAAATCGTCCTGCCAACAAGAAACACAGATCCATGGTGACAAAAAAAAAAAATAAAAAATAAAAAATAAAAGATAGGCGAGAAAAATGAAACATACCAGCCAAAAGCTTGGAGGGAGTTGTAAGTTAGCAGATAGAAGTTCGATAGGCGAGACATTCTGTTGTCGGCAGCTTGAACAGTAACCTCCGTCGAATGAAAATGGAAATAGAAATAGAAAGTCGATAAATTTCAAAGGGGGATTTGAGTTGGAATTAATGTGGGTTTTGTTTTGATAATTTCTGGGCTAGAAAGTCGATAAATTCCCAGACTTTCCTGGTGATTATTCATTCATTTATTCATTCATTCATTAATTGATTCATTTATTCATTCATTTATTCATCCCATGGCTTCTGGGATTAACAAAGCACATTAAAGTCGAGACATTTTTACTAGACGTTCATCATGAGATTTGGGTAAAATTTTATCCGATGGCCAACAGATTTGAATGATATAAAATTTTGTTGTGTAGGATTCATCCGACGGTTTAGACCCCATCATCTATCAATCAACGATGGCTATCCCATCAGAAATTAGTAAAACCCAGCAGCCCGTTTCCCCGTTGAGCTCTGGAGGGCGTGAAGGTCCGTCTGAGTACTCATTTATGTGTTTGCCTCTGCCCTATCCTGGCGCATGGGCTGCCCAGAGGTACTCTCTCTCTCTCTATCTCTCTCTTGCCCGATGGAAATCCCAGCCCCAACTTTTTCTCCCCCTTATGAATGTGGCTGAGAATAATCGGCTCTTGTAGAAGTGATTACTATCACATCCTGCACCAATTGCGTCAAGCATCAAAGTGTGGCAAACTGTTGTGGCCCAAAAGGAGATATATACCGTAAAATGTAAGACACGTTGAGCATAAAGTTACATAGGGAATCAATTTTATTCACCAAAATTGGATACGTTGACCCAATGCTCCATTGAGGGCTACTAGTGTTTGCTATTGTTCTTGTGTTGCATTAACATTTTTCACATGGATGACTTCTAGGTCCTCCTTGAATGTCGTGTCTAATCGATCTGAACACTTCTTAGTCTAACATAAAGGTTCGAGTGACGACACCAATCTCGTCGGTGGCTAATCGAGCGGGGAAAGGTCGGAGTTTGATTGCAAGTGGCTTTTTGGTGAGCTAAGGCTATAGTCATCCCATCTAGAGCTAGCAAAGCTTTGTAAGAAGTAGCAATGCTTGTGTAAAAGTCAAACCCCACCGCTATGAGATATTGTGCGTTTTGTCCATTACATATGGTCGTCAGCCTCACGGTTTTAACACAAGTTTACTGGGGAGAGGTTTCCACACACTTATAAGGAAGATTTGTTTCCCTCTCCAACCGATGTGGGATCTCACAATTCACCCCCTTAGGGACCTAGCGTCCTTGTTGACACACCACATGGTGTCTCGCTCTCATGTCATTTTGTAACAACCCAAGCCCACCAGCCCACCGTTAGTAGTTTTTGTCTGACTTGGTCCATTACATATAACCTGCAGCCTCATGGTTTTAAAACGCGTCTACTAGAGAGATGTTTTCACATCCTTATAATGAATGTTTCGTTCCTCTCTTCTACCGATGAGCGATCTCACAACTCGATGTCTACATTGACGGGTTGTATATATATATAAAAGAAAAAATGATAAAAATTAACTCACAACATCAATTAATATTTTTTTCTATTTAATAAATTTGAGGAGGATGATAGGATACTATTTGCCATTATATCATAATTATTTTTCTTTTGACAAATTGTAGGAGAGATGGCTTTTGGAAGGGCATCAAGTGTATCATACTGTTGAATATGCTCTTCCACTTATCAAAATTTCGTGAAAATTGTAAGTCATTCCCTCTCCTATCTCTTACTTCTTCTCCATTTGAAGATTAGGTGAGGTTTGATCTTTATATTTGAAAAAGTTAGATACAAAAACCGTTCTTATCGTATGC

mRNA sequence

AAAGGGTTTTTATTTTTTGAGAGAGAAAGTGTTCAAAAAATGGGAGGAAGATGATTGCGACAAATGGTGGTCATAATTTAACCGACGCAGCAAAATTCTTGGACGGGAAAATTCACTGGGAATAATCATTTTGGAGGTCGGGTTAATTGGATTTGTCGAGACGGAAAGTGTTTTTGGCAGGGGAAGGAAGAAGAATTCGACAGGTACAGTTTCAAGAAAAATAGTGGGTAGACAAAAAGCAGAACCTGAACAACGATATTAGATTTGAGGATAAGTTTTACATCTGGAGTGGTCTCATTTTCAGGATTCATCCGACGGTTTAGACCCCATCATCTATCAATCAACGATGGCTATCCCATCAGAAATTAGTAAAACCCAGCAGCCCGTTTCCCCGTTGAGCTCTGGAGGGCGTGAAGGTCCGTCTGAGTACTCATTTATGTGTTTGCCTCTGCCCTATCCTGGCGCATGGGCTGCCCAGAGGAGAGATGGCTTTTGGAAGGGCATCAAGTGTATCATACTGTTGAATATGCTCTTCCACTTATCAAAATTTCGTGAAAATTGTAAGTCATTCCCTCTCCTATCTCTTACTTCTTCTCCATTTGAAGATTAGGTGAGGTTTGATCTTTATATTTGAAAAAGTTAGATACAAAAACCGTTCTTATCGTATGC

Coding sequence (CDS)

ATGGCTATCCCATCAGAAATTAGTAAAACCCAGCAGCCCGTTTCCCCGTTGAGCTCTGGAGGGCGTGAAGGTCCGTCTGAGTACTCATTTATGTGTTTGCCTCTGCCCTATCCTGGCGCATGGGCTGCCCAGAGGAGAGATGGCTTTTGGAAGGGCATCAAGTGTATCATACTGTTGAATATGCTCTTCCACTTATCAAAATTTCGTGAAAATTGTAAGTCATTCCCTCTCCTATCTCTTACTTCTTCTCCATTTGAAGATTAG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G008340.1CmoCh02G008340.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G008340Cp4.1LG05g08940Cucurbita pepo (Zucchini)cmocpeB595
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G008340Watermelon (97103) v2cmowmbB615
CmoCh02G008340Watermelon (97103) v2cmowmbB586
CmoCh02G008340Watermelon (97103) v2cmowmbB588
CmoCh02G008340Watermelon (97103) v2cmowmbB617
CmoCh02G008340Watermelon (97103) v2cmowmbB619
CmoCh02G008340Wax gourdcmowgoB0702
CmoCh02G008340Wax gourdcmowgoB0746
CmoCh02G008340Wax gourdcmowgoB0761
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB180
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB211
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB356
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB357
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB403
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB429
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB433
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB434
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB436
CmoCh02G008340Cucurbita moschata (Rifu)cmocmoB445
CmoCh02G008340Cucumber (Gy14) v1cgycmoB0099
CmoCh02G008340Cucumber (Gy14) v1cgycmoB0471
CmoCh02G008340Cucumber (Gy14) v1cgycmoB0618
CmoCh02G008340Cucumber (Gy14) v1cgycmoB1047
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB475
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB553
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB650
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB722
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB723
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB821
CmoCh02G008340Cucurbita maxima (Rimu)cmacmoB857
CmoCh02G008340Wild cucumber (PI 183967)cmocpiB572
CmoCh02G008340Wild cucumber (PI 183967)cmocpiB573
CmoCh02G008340Wild cucumber (PI 183967)cmocpiB590
CmoCh02G008340Wild cucumber (PI 183967)cmocpiB605
CmoCh02G008340Wild cucumber (PI 183967)cmocpiB631
CmoCh02G008340Cucumber (Chinese Long) v2cmocuB567
CmoCh02G008340Cucumber (Chinese Long) v2cmocuB568
CmoCh02G008340Cucumber (Chinese Long) v2cmocuB584
CmoCh02G008340Cucumber (Chinese Long) v2cmocuB597
CmoCh02G008340Cucumber (Chinese Long) v2cmocuB607
CmoCh02G008340Cucumber (Chinese Long) v2cmocuB624
CmoCh02G008340Melon (DHL92) v3.5.1cmomeB522
CmoCh02G008340Melon (DHL92) v3.5.1cmomeB536
CmoCh02G008340Melon (DHL92) v3.5.1cmomeB550
CmoCh02G008340Melon (DHL92) v3.5.1cmomeB551
CmoCh02G008340Melon (DHL92) v3.5.1cmomeB560
CmoCh02G008340Melon (DHL92) v3.5.1cmomeB576
CmoCh02G008340Watermelon (Charleston Gray)cmowcgB514
CmoCh02G008340Watermelon (Charleston Gray)cmowcgB551
CmoCh02G008340Watermelon (Charleston Gray)cmowcgB525
CmoCh02G008340Watermelon (Charleston Gray)cmowcgB554
CmoCh02G008340Watermelon (Charleston Gray)cmowcgB555
CmoCh02G008340Watermelon (97103) v1cmowmB546
CmoCh02G008340Watermelon (97103) v1cmowmB547
CmoCh02G008340Watermelon (97103) v1cmowmB550
CmoCh02G008340Watermelon (97103) v1cmowmB575
CmoCh02G008340Watermelon (97103) v1cmowmB577
CmoCh02G008340Cucurbita pepo (Zucchini)cmocpeB574
CmoCh02G008340Cucurbita pepo (Zucchini)cmocpeB586
CmoCh02G008340Cucurbita pepo (Zucchini)cmocpeB587
CmoCh02G008340Cucurbita pepo (Zucchini)cmocpeB588
CmoCh02G008340Cucurbita pepo (Zucchini)cmocpeB600
CmoCh02G008340Bottle gourd (USVL1VR-Ls)cmolsiB532
CmoCh02G008340Bottle gourd (USVL1VR-Ls)cmolsiB547
CmoCh02G008340Bottle gourd (USVL1VR-Ls)cmolsiB548
CmoCh02G008340Bottle gourd (USVL1VR-Ls)cmolsiB553
CmoCh02G008340Bottle gourd (USVL1VR-Ls)cmolsiB554
CmoCh02G008340Cucumber (Gy14) v2cgybcmoB111
CmoCh02G008340Cucumber (Gy14) v2cgybcmoB112
CmoCh02G008340Cucumber (Gy14) v2cgybcmoB364
CmoCh02G008340Cucumber (Gy14) v2cgybcmoB500
CmoCh02G008340Cucumber (Gy14) v2cgybcmoB802
CmoCh02G008340Melon (DHL92) v3.6.1cmomedB614
CmoCh02G008340Melon (DHL92) v3.6.1cmomedB627
CmoCh02G008340Melon (DHL92) v3.6.1cmomedB629
CmoCh02G008340Melon (DHL92) v3.6.1cmomedB641
CmoCh02G008340Melon (DHL92) v3.6.1cmomedB660
CmoCh02G008340Silver-seed gourdcarcmoB0219
CmoCh02G008340Silver-seed gourdcarcmoB0421
CmoCh02G008340Silver-seed gourdcarcmoB0467
CmoCh02G008340Silver-seed gourdcarcmoB0599
CmoCh02G008340Silver-seed gourdcarcmoB1339
CmoCh02G008340Cucumber (Chinese Long) v3cmocucB0677
CmoCh02G008340Cucumber (Chinese Long) v3cmocucB0698
CmoCh02G008340Cucumber (Chinese Long) v3cmocucB0717
CmoCh02G008340Cucumber (Chinese Long) v3cmocucB0744