CmoCh02G008230 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G008230
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHistone H4
LocationCmo_Chr02 : 5031181 .. 5033761 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGACGTGGTAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTGAGAGATAATATCCAGGGCATTACTAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTTTATGCCTTGAAAAGGCAAGGAAGGACTTTATATGGTTTCGGAGGTTAGATTTAGGGTTTAATTTGTAGAATGACTGTAGATCATTTCTTTTGATCTAGTATCTCGTAGGCGCGCTTATAGGTTTTTCTGTAATTTAATTCCTCACTAGTCGGGAAGCAATGAAATGTTTACGCTATTGAAGAGATGTTCTATAAAAAATTTCGAGTTGGCTTCATCCATTTCCTCATTTTATTGACATTTAGCTCATTTCTTCGAATTAACGCTTTCTAGTTTACGATCTAACCTCCTTGAATTTCGTGGAATGCTCGTATCCGTATGCAGATTCCAGATATGCATCATATGTAATCCGTTTTGTCATTAATTTTAACTATTAGTTTATGTGGAAGTTGAATATCTTTTGATGCATTGGTTGAATGGGACATCTATTCGTCTGATCCAATGTTGTAAGCTTCAAATTTCCTCATCCTTTCTCTGAATGATTGTTGTTAGACTCAGAACCTGAAACTCTTAACCAGTTTATGTTTATGAAACTTTCATAGAAAATCAAGAAAAGCAGTTTAGGTGAAAAGCTATATTAGGGTGCCTCCAGTCTTCAAAGCTCTCCCGGGACTGTCTTTTTCGTTGGTTGAAGATGACAATTTCCTATAGTAAAGCTGCCCTGCATGCTGCTGTGCTTTTCATGGAGAAAAGTTTGAAAGCTCAGTTACCAGGTAACTTCTACATATTTATGTATGGATGGATTTCATTGTTGTTTTGCTGTTTGTTTCTATGGTGCGTTTGAATAGTCTCCTTATTTGTGAAATCATGAAAGATTCTGATTTTGTTTCTTCTTTTCTAGCTTTTTACAGTCTAGTGTTCATGACCCGTTAAGTTTAGCTTCCGCTATGGTGGGTCATATGCTGCCTGTAAATCAAAACATCGGTTGTAATTCAAGTTTACATGCCTAATTGAAATGCCTGTCTGATTTGCCTTCTTCCTCAATGAACATTGTTCACAGCTTGAATGATTGATTGGCACCAGCTTCAAGTCCCTGATAAGGAACATAATTGAGAGATTGTTTTTTTTTTTTTTTTGTTTTTGTGTATTTGACCTTAACTAAGCTCACTAGCTAATATTGTTCTCTTTGGACTTTTCTTTTCGAGTATTTCTTCAAGCTTTTGAAACGATTTGCTAGAGAGAGGTTTCTACACAATTATAACCCCTCTACAATTGATGTGGGATCTTACAATCCACCCTTTGGGGGCCAACGTCCTCATTAGCACACTGCTTGGTGTCTAACTCTAATACTAATTATAATAATTCAAGCTCACCGCCAATAGATGTGATTCTCTTTGAGTTTTTTCTTTTAAGCTTCTAGTCAAAGTTTTAGAACGTGTTTGCTAGAGGTTTCCACACCCTTACGAGGAATGCTTTGCTTTCCTCTCCGATCGTTGTGGGATCTCATAACACATTAGACTCATAAGAGTTAGTCGGGCATCTTTTTTTTCAGTAAATTTTTGCTATATTCTGTACTGGGAATAGATATGAATTCATGATTCAAACCCTTTTCAGGTTCTTTATAACGACTGAAAATCCAGCTAGCTTTTTACCTTCTTAGGGTTGAAAATTTGAGGCAATTTTCTCCCAGTTCTCACCGTCCTGTTATCCTTTTTCTGTCTTGTTTTCTATGTCAAAACACTCAACCCCACTATGCATCTTGGAATATGCTCCCTACTTCCTTGACTCTGGCTTACGCCCTTCAACCCTTTGGCATGGCCGAGGAACCATAAGGATTCCCACTGTGCTCGTACTCAAAGATTAGGTTGATAAGCAGATTGTTATACCGAATATTCATAAGTGAATGTGATTGACAGGTCACAACTCGAAGTCAAAATTGAGTATGAAATAACAAGGCTTGCAAAACTCACGATTATTTTCATTCAAATGGATACTCATTGATGGTGTGACCCGGACGAGCATCAAAGTGGATGAGTAGAGTGGCAACAGCACGCATGCAAAATGGTAGCTTTTGGGAGTTCATTCACTAAGTTTGGCCTACGACAAAGTGATATGAAGCGGACGAGCAACGACGGAGTAAGGTCAGGCAACATTTACTGGTGTGTAATGTAGTCAAGTGAACGACTGATGAAATCGTGTGGAGGAGGAAGAAGAAAAGAACAAATAAGAGAGGTGGCAACAATTGGAGTGCATGGAGCTACATATTTGTGAGAGTGGCAGCGGAGCTCAACTATATTATATATTATGTATATGTATATATTTCTCGCTCTCTTGGTATCACAATTTTCATTCGTTTCATAACGATATGATTGATGTGTAC

mRNA sequence

ATGTCTGGACGTGGTAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTGAGAGATAATATCCAGGGCATTACTAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGTCTAGTGTTCATGACCCGTTAAGTTTAGCTTCCGCTATGGTCACAACTCGAAGTCAAAATTGAGTATGAAATAACAAGGCTTGCAAAACTCACGATTATTTTCATTCAAATGGATACTCATTGATGGTGTGACCCGGACGAGCATCAAAGTGGATGAGTAGAGTGGCAACAGCACGCATGCAAAATGGTAGCTTTTGGGAGTTCATTCACTAAGTTTGGCCTACGACAAAGTGATATGAAGCGGACGAGCAACGACGGAGTAAGGTCAGGCAACATTTACTGGTGTGTAATGTAGTCAAGTGAACGACTGATGAAATCGTGTGGAGGAGGAAGAAGAAAAGAACAAATAAGAGAGGTGGCAACAATTGGAGTGCATGGAGCTACATATTTGTGAGAGTGGCAGCGGAGCTCAACTATATTATATATTATGTATATGTATATATTTCTCGCTCTCTTGGTATCACAATTTTCATTCGTTTCATAACGATATGATTGATGTGTAC

Coding sequence (CDS)

ATGTCTGGACGTGGTAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTGAGAGATAATATCCAGGGCATTACTAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGTCTAGTGTTCATGACCCGTTAAGTTTAGCTTCCGCTATGGTCACAACTCGAAGTCAAAATTGA
Homology
[Close]
BLAST of CmoCh02G008230 vs. Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-40
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-40
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-40
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. Swiss-Prot
Match: H4_MAIZE (Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-40
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. Swiss-Prot
Match: H4_LOLTE (Histone H4 OS=Lolium temulentum PE=3 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-40
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TrEMBL
Match: A0A0L9T8L2_PHAAN (Histone H4 OS=Phaseolus angularis GN=LR48_Vigan05g185100 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TrEMBL
Match: Q7XUC9_ORYSJ (Histone H4 OS=Oryza sativa subsp. japonica GN=OSJNBb0064P21.1 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TrEMBL
Match: D7KH43_ARALL (Histone H4 (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470793 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TrEMBL
Match: R0FQR2_9BRAS (Histone H4 OS=Capsella rubella GN=CARUB_v10018191mg PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 47  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 106

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDV 88
           IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 107 IFLENVIRDAVTYTEHARRKTVTAMDV 133

[Close]
BLAST of CmoCh02G008230 vs. TrEMBL
Match: A0A096T9R1_MAIZE (Histone H4 OS=Zea mays GN=H4C14 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 146 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 205

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDV 88
           IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 206 IFLENVIRDAVTYTEHARRKTVTAMDV 232

[Close]
BLAST of CmoCh02G008230 vs. TAIR10
Match: AT1G07660.1 (AT1G07660.1 Histone superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 7.4e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TAIR10
Match: AT1G07820.1 (AT1G07820.1 Histone superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 7.4e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TAIR10
Match: AT2G28740.1 (AT2G28740.1 histone H4)

HSP 1 Score: 166.8 bits (421), Expect = 7.4e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TAIR10
Match: AT3G45930.1 (AT3G45930.1 Histone superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 7.4e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. TAIR10
Match: AT3G53730.1 (AT3G53730.1 Histone superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 7.4e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. NCBI nr
Match: gi|976915457|gb|KVI01404.1| (Histone core, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. NCBI nr
Match: gi|922364196|ref|XP_003610120.2| (core histone H2A/H2B/H3/H4 [Medicago truncatula])

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. NCBI nr
Match: gi|16797797|dbj|BAB71814.1| (histone H4, partial [Citrus jambhiri])

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. NCBI nr
Match: gi|297788304|ref|XP_002862282.1| (hypothetical protein ARALYDRAFT_497532 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 88
          IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDV 87

[Close]
BLAST of CmoCh02G008230 vs. NCBI nr
Match: gi|670424720|ref|XP_008653038.1| (PREDICTED: histone H4-like [Zea mays])

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 104 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 163

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDV 88
           IFLENVIRDAVTYTEHARRKTVTAMDV
Sbjct: 164 IFLENVIRDAVTYTEHARRKTVTAMDV 190

The following BLAST results are available for this feature:
BLAST of CmoCh02G008230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H4_ARATH1.3e-40100.00Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2[more]
H4_PEA1.3e-40100.00Histone H4 OS=Pisum sativum PE=1 SV=2[more]
H4_CHEMJ1.3e-40100.00Histone H4 OS=Chelidonium majus PE=3 SV=3[more]
H4_MAIZE1.3e-40100.00Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2[more]
H4_LOLTE1.3e-40100.00Histone H4 OS=Lolium temulentum PE=3 SV=2[more]
BLAST of CmoCh02G008230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0L9T8L2_PHAAN1.5e-38100.00Histone H4 OS=Phaseolus angularis GN=LR48_Vigan05g185100 PE=3 SV=1[more]
Q7XUC9_ORYSJ1.5e-38100.00Histone H4 OS=Oryza sativa subsp. japonica GN=OSJNBb0064P21.1 PE=2 SV=2[more]
D7KH43_ARALL1.5e-38100.00Histone H4 (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470793 P... [more]
R0FQR2_9BRAS1.5e-38100.00Histone H4 OS=Capsella rubella GN=CARUB_v10018191mg PE=3 SV=1[more]
A0A096T9R1_MAIZE1.5e-38100.00Histone H4 OS=Zea mays GN=H4C14 PE=3 SV=1[more]
BLAST of CmoCh02G008230 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07660.17.4e-42100.00 Histone superfamily protein[more]
AT1G07820.17.4e-42100.00 Histone superfamily protein[more]
AT2G28740.17.4e-42100.00 histone H4[more]
AT3G45930.17.4e-42100.00 Histone superfamily protein[more]
AT3G53730.17.4e-42100.00 Histone superfamily protein[more]
BLAST of CmoCh02G008230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976915457|gb|KVI01404.1|2.1e-38100.00Histone core, partial [Cynara cardunculus var. scolymus][more]
gi|922364196|ref|XP_003610120.2|2.1e-38100.00core histone H2A/H2B/H3/H4 [Medicago truncatula][more]
gi|16797797|dbj|BAB71814.1|2.1e-38100.00histone H4, partial [Citrus jambhiri][more]
gi|297788304|ref|XP_002862282.1|2.1e-38100.00hypothetical protein ARALYDRAFT_497532 [Arabidopsis lyrata subsp. lyrata][more]
gi|670424720|ref|XP_008653038.1|2.1e-38100.00PREDICTED: histone H4-like [Zea mays][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR009072Histone-fold
IPR019809Histone_H4_CS
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0000786 nucleosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009579 thylakoid
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G008230.1CmoCh02G008230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 77..89
score: 3.4E-52coord: 62..76
score: 3.4E-52coord: 5..16
score: 3.4E-52coord: 20..39
score: 3.4E-52coord: 40..60
score: 3.4
IPR001951Histone H4SMARTSM00417h44coord: 16..90
score: 1.7
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 2..89
score: 1.0
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 3..89
score: 6.38
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19
scor
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..87
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G008230ClCG02G020340Watermelon (Charleston Gray)cmowcgB525
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G008230Cucumber (Chinese Long) v3cmocucB0677
CmoCh02G008230Cucumber (Chinese Long) v3cmocucB0698
CmoCh02G008230Cucumber (Chinese Long) v3cmocucB0717
CmoCh02G008230Cucumber (Chinese Long) v3cmocucB0727
CmoCh02G008230Cucumber (Chinese Long) v3cmocucB0729
CmoCh02G008230Watermelon (97103) v2cmowmbB615
CmoCh02G008230Watermelon (97103) v2cmowmbB586
CmoCh02G008230Watermelon (97103) v2cmowmbB588
CmoCh02G008230Watermelon (97103) v2cmowmbB617
CmoCh02G008230Watermelon (97103) v2cmowmbB619
CmoCh02G008230Watermelon (97103) v2cmowmbB632
CmoCh02G008230Wax gourdcmowgoB0702
CmoCh02G008230Wax gourdcmowgoB0746
CmoCh02G008230Wax gourdcmowgoB0761
CmoCh02G008230Cucurbita moschata (Rifu)cmocmoB180
CmoCh02G008230Cucurbita moschata (Rifu)cmocmoB211
CmoCh02G008230Cucurbita moschata (Rifu)cmocmoB357
CmoCh02G008230Cucurbita moschata (Rifu)cmocmoB403
CmoCh02G008230Cucurbita moschata (Rifu)cmocmoB429
CmoCh02G008230Cucurbita moschata (Rifu)cmocmoB436
CmoCh02G008230Cucurbita moschata (Rifu)cmocmoB445
CmoCh02G008230Cucumber (Gy14) v1cgycmoB0099
CmoCh02G008230Cucumber (Gy14) v1cgycmoB0490
CmoCh02G008230Cucumber (Gy14) v1cgycmoB0503
CmoCh02G008230Cucurbita maxima (Rimu)cmacmoB475
CmoCh02G008230Cucurbita maxima (Rimu)cmacmoB553
CmoCh02G008230Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G008230Cucurbita maxima (Rimu)cmacmoB650
CmoCh02G008230Cucurbita maxima (Rimu)cmacmoB821
CmoCh02G008230Cucurbita maxima (Rimu)cmacmoB857
CmoCh02G008230Wild cucumber (PI 183967)cmocpiB573
CmoCh02G008230Wild cucumber (PI 183967)cmocpiB590
CmoCh02G008230Wild cucumber (PI 183967)cmocpiB605
CmoCh02G008230Wild cucumber (PI 183967)cmocpiB615
CmoCh02G008230Cucumber (Chinese Long) v2cmocuB568
CmoCh02G008230Cucumber (Chinese Long) v2cmocuB584
CmoCh02G008230Cucumber (Chinese Long) v2cmocuB597
CmoCh02G008230Cucumber (Chinese Long) v2cmocuB609
CmoCh02G008230Melon (DHL92) v3.5.1cmomeB536
CmoCh02G008230Melon (DHL92) v3.5.1cmomeB550
CmoCh02G008230Melon (DHL92) v3.5.1cmomeB560
CmoCh02G008230Melon (DHL92) v3.5.1cmomeB576
CmoCh02G008230Watermelon (Charleston Gray)cmowcgB514
CmoCh02G008230Watermelon (Charleston Gray)cmowcgB551
CmoCh02G008230Watermelon (Charleston Gray)cmowcgB554
CmoCh02G008230Watermelon (Charleston Gray)cmowcgB555
CmoCh02G008230Watermelon (97103) v1cmowmB546
CmoCh02G008230Watermelon (97103) v1cmowmB547
CmoCh02G008230Watermelon (97103) v1cmowmB550
CmoCh02G008230Watermelon (97103) v1cmowmB575
CmoCh02G008230Watermelon (97103) v1cmowmB577
CmoCh02G008230Cucurbita pepo (Zucchini)cmocpeB574
CmoCh02G008230Cucurbita pepo (Zucchini)cmocpeB583
CmoCh02G008230Cucurbita pepo (Zucchini)cmocpeB586
CmoCh02G008230Cucurbita pepo (Zucchini)cmocpeB587
CmoCh02G008230Cucurbita pepo (Zucchini)cmocpeB588
CmoCh02G008230Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G008230Cucurbita pepo (Zucchini)cmocpeB600
CmoCh02G008230Bottle gourd (USVL1VR-Ls)cmolsiB532
CmoCh02G008230Bottle gourd (USVL1VR-Ls)cmolsiB547
CmoCh02G008230Bottle gourd (USVL1VR-Ls)cmolsiB548
CmoCh02G008230Bottle gourd (USVL1VR-Ls)cmolsiB553
CmoCh02G008230Bottle gourd (USVL1VR-Ls)cmolsiB554
CmoCh02G008230Cucumber (Gy14) v2cgybcmoB112
CmoCh02G008230Cucumber (Gy14) v2cgybcmoB364
CmoCh02G008230Cucumber (Gy14) v2cgybcmoB500
CmoCh02G008230Cucumber (Gy14) v2cgybcmoB621
CmoCh02G008230Cucumber (Gy14) v2cgybcmoB788
CmoCh02G008230Melon (DHL92) v3.6.1cmomedB600
CmoCh02G008230Melon (DHL92) v3.6.1cmomedB614
CmoCh02G008230Melon (DHL92) v3.6.1cmomedB627
CmoCh02G008230Melon (DHL92) v3.6.1cmomedB641
CmoCh02G008230Melon (DHL92) v3.6.1cmomedB660
CmoCh02G008230Silver-seed gourdcarcmoB0219
CmoCh02G008230Silver-seed gourdcarcmoB0421
CmoCh02G008230Silver-seed gourdcarcmoB0467
CmoCh02G008230Silver-seed gourdcarcmoB0599
CmoCh02G008230Silver-seed gourdcarcmoB1339