BLAST of CmoCh02G006960 vs. Swiss-Prot
Match:
PP133_ARATH (Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1)
HSP 1 Score: 789.6 bits (2038), Expect = 3.2e-227
Identity = 395/786 (50.25%), Postives = 537/786 (68.32%), Query Frame = 1
Query: 7 FLRPVVTYLVPKPPWFHLFHTSTDP-IATSNEVSTIIETVDPIEDALEIIAPHLSSDVIT 66
F R V+ + KP W ++S + S EV +I+ PIE ALE + P LS ++IT
Sbjct: 6 FFRSVIQFY-SKPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALEPLVPFLSKNIIT 65
Query: 67 SVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELKDSSTE 126
SVI+++ N +LGFR FIW+ RR L S L+ID L +DN +LYW+TL+ELK
Sbjct: 66 SVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 125
Query: 127 ISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAF-LLALA 186
+ S F VLI AY+K GMAEKAV+SFG MK+F+C+P+++ YN+IL V++R E F +LA A
Sbjct: 126 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFA 185
Query: 187 VYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLC 246
VYN+MLKCN +PN+ T+ IL+ G K +T +A +FD+MT R + PN +TY+I++SGLC
Sbjct: 186 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 245
Query: 247 QAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVK 306
Q DDA++LF +M+ SG PD + +N LL+GFCKLG EAF LL+ FEKDG +LG++
Sbjct: 246 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 305
Query: 307 GYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEM 366
GYS LIDGLFRARRY +A Y +KN++PD+ILYTI+IQGL + G++ +AL LL M
Sbjct: 306 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 365
Query: 367 TERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLI 426
+G SPDT CYNAVI+ C GLL++ +SL+LE+S + FP+ T++ILIC MC+NGL+
Sbjct: 366 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 425
Query: 427 DEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQG 486
EA+ +F E+EK GC PSV TFN+LIDG CK+G+LKEA LL +KME+GR SLFLRLS
Sbjct: 426 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 485
Query: 487 ANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDG 546
N+ T + ESG I KAY+ L ++G PDI +YN+LINGFC+ +IDG
Sbjct: 486 GNRSFDT---------MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 545
Query: 547 AFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMT 606
A KL +QLKG PDSVTY TLI+GLHRVGR+E+A +F KD + P+VY+S+MT
Sbjct: 546 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMT 605
Query: 607 WSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNSKDFE 666
WSCR++KV + F++WMKYL+ DE +E+ F +G+ E+A+ R+IE+D +
Sbjct: 606 WSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELT 665
Query: 667 LAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAVEVFL 726
L PYTI+LIGLCQ+GR EA +FSVL++ K +++ SCV LI GLC +LD A+EVFL
Sbjct: 666 LGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFL 725
Query: 727 YTLETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYL-------HHST 784
YTL+ LMPR+CN LL LL ++ + L RME GY++++ L H
Sbjct: 726 YTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDSMLRFEILKYHRHR 779
BLAST of CmoCh02G006960 vs. Swiss-Prot
Match:
PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 297.0 bits (759), Expect = 6.4e-79
Identity = 168/516 (32.56%), Postives = 278/516 (53.88%), Query Frame = 1
Query: 95 SQNLIIDRLVKDNAFELYWKTLQELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMM 154
S+N+++D L D+A +L+ + +Q S S F+ L+ A +K + + M
Sbjct: 52 SRNVLLD-LKLDDAVDLFGEMVQ----SRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 111
Query: 155 KDFECKPNIYAYNLILHVLVRREAFLLALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKT 214
++ ++Y+YN++++ RR LALAV +M+K P++VT S L++G+C +
Sbjct: 112 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 171
Query: 215 QEALVLFDEMTDRDVLPNEITYSIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVL 274
EA+ L D+M + PN +T++ ++ GL K +A L +M A GC PD+ TY +
Sbjct: 172 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 231
Query: 275 LNGFCKLGYFDEAFALLKSFEKDGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNV 334
+NG CK G D A +LLK EK V Y+ +ID L + ++A + + K +
Sbjct: 232 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 291
Query: 335 EPDVILYTIMIQGLCQEGRVNEALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQS 394
P+V+ Y +I+ LC GR ++A LL +M ER +P+ ++A+I F G L +A+
Sbjct: 292 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 351
Query: 395 LRLEISNHDCFPNNHTYSILICGMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFC 454
L E+ P+ TYS LI G C + +DEA+H+F M C P+VVT+N+LI GFC
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 411
Query: 455 KAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANKLLG-TVDLQVMLEQLCESGLIHKAYKL 514
KA +++E LF +M L+G TV +++ L ++G A K+
Sbjct: 412 KAKRVEEGMELFREM--------------SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 471
Query: 515 LMQLVESGVFPDIRTYNILINGFCKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHR 574
++V GV PDI TY+IL++G CK ++ A +F+ +Q PD TY +I+G+ +
Sbjct: 472 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 531
Query: 575 VGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSCRR 610
G+ ED +F + G KP +Y ++++ CR+
Sbjct: 532 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
BLAST of CmoCh02G006960 vs. Swiss-Prot
Match:
PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 293.9 bits (751), Expect = 5.4e-78
Identity = 178/632 (28.16%), Postives = 320/632 (50.63%), Query Frame = 1
Query: 102 RLVKDNAFELYWKTLQELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKP 161
+ + D L +K+LQE D SS F +++++YS+ + +KA+ + + P
Sbjct: 109 KTLDDEYASLVFKSLQETYDLCYSTSS-VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP 168
Query: 162 NIYAYNLILHVLVRREAFL-LALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVL 221
+ +YN +L +R + + A V+ +ML+ ++PNV TY+ILI GFC AL L
Sbjct: 169 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 228
Query: 222 FDEMTDRDVLPNEITYSIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCK 281
FD+M + LPN +TY+ ++ G C+ +KIDD +L M G P++I+YNV++NG C+
Sbjct: 229 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 288
Query: 282 LGYFDEAFALLKSFEKDGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVIL 341
G E +L + G+ L Y+ LI G + + +A + + + R + P VI
Sbjct: 289 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 348
Query: 342 YTIMIQGLCQEGRVNEALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEIS 401
YT +I +C+ G +N A+ LD+M RG P+ Y ++ GF G +++A + E++
Sbjct: 349 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 408
Query: 402 NHDCFPNNHTYSILICGMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLK 461
++ P+ TY+ LI G C G +++A V +M++ G P VV++++++ GFC++ +
Sbjct: 409 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 468
Query: 462 EAHLLFYKM-EIGRKPSLFLRLSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVE 521
EA + +M E G KP T+ +++ CE +A L +++
Sbjct: 469 EALRVKREMVEKGIKPD--------------TITYSSLIQGFCEQRRTKEACDLYEEMLR 528
Query: 522 SGVFPDIRTYNILINGFCKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDED 581
G+ PD TY LIN +C +++ A +L +M KG LPD VTY LI+GL++ R +
Sbjct: 529 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 588
Query: 582 ALGIFEQMVKDGCKPEPSVYKSIMTWSCRRKKVSLTFSVWMKYLRNF--RGWKDEKVKVV 641
A + ++ + P Y +++ +C ++ F + ++ F +G E +V
Sbjct: 589 AKRLLLKLFYEESVPSDVTYHTLIE-NCS----NIEFKSVVSLIKGFCMKGMMTEADQVF 648
Query: 642 EESFDKGDLEKAISRIIEMDLNSKDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRI 701
E K N K A Y I + G C+AG + +A+ ++ + +
Sbjct: 649 ESMLGK---------------NHKPDGTA-YNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 704
Query: 702 ISSASCVMLIGGLCVEGKLDLAVEVFLYTLET 730
+ + + + L+ L EGK++ V ++ L +
Sbjct: 709 LHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
BLAST of CmoCh02G006960 vs. Swiss-Prot
Match:
PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 292.0 bits (746), Expect = 2.1e-77
Identity = 160/480 (33.33%), Postives = 260/480 (54.17%), Query Frame = 1
Query: 131 FSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFLLALAVYNQML 190
FS L+ A +K + + M++ N Y Y+++++ RR LALAV +M+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 191 KCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLCQAKKID 250
K PN+VT S L++G+C + + EA+ L D+M PN +T++ ++ GL K
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 251 DAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVKGYSCLI 310
+A L +M A GC PD++TY V++NG CK G D AF LL E+ GV Y+ +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 311 DGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEMTERGFS 370
DGL + + D+A +++ K + P+V+ Y+ +I LC GR ++A LL +M ER +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 371 PDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLIDEAQHV 430
PD ++A+I F G L +A+ L E+ P+ TYS LI G C + +DEA+ +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 431 FNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANKLLG 490
F M C P VVT+N+LI GFCK +++E ME+ R+ S L+G
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG------MEVFREMS--------QRGLVG 443
Query: 491 -TVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDGAFKLF 550
TV ++++ L ++G A ++ ++V GV P+I TYN L++G CK ++ A +F
Sbjct: 444 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 503
Query: 551 KDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSCRR 610
+ +Q P TY +I+G+ + G+ ED +F + G KP+ Y ++++ CR+
Sbjct: 504 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
BLAST of CmoCh02G006960 vs. Swiss-Prot
Match:
PPR98_ARATH (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2 SV=1)
HSP 1 Score: 288.5 bits (737), Expect = 2.3e-76
Identity = 170/530 (32.08%), Postives = 271/530 (51.13%), Query Frame = 1
Query: 95 SQNLIIDRLVKDNAFELYWKTLQELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMM 154
S+N ++ L D A +L+ E+ S S FS L+ A +K + + M
Sbjct: 37 SRNALL-HLKLDEAVDLFG----EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM 96
Query: 155 KDFECKPNIYAYNLILHVLVRREAFLLALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKT 214
+ N+Y YN++++ L RR ALA+ +M+K P++VT + L++GFC ++
Sbjct: 97 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 156
Query: 215 QEALVLFDEMTDRDVLPNEITYSIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVL 274
EA+ L D+M + P+ +T++ ++ GL Q K +A L +M GC PD++TY +
Sbjct: 157 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 216
Query: 275 LNGFCKLGYFDEAFALLKSFEKDGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNV 334
+NG CK G D A LL EK V YS +ID L + R D+A + + K +
Sbjct: 217 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 276
Query: 335 EPDVILYTIMIQGLCQEGRVNEALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQS 394
PDV Y+ +I LC GR ++A LL +M ER +P+ +N++I F G L +A+
Sbjct: 277 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 336
Query: 395 LRLEISNHDCFPNNHTYSILICGMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFC 454
L E+ PN TY+ LI G C + +DEAQ +F M CLP VVT+N+LI+GFC
Sbjct: 337 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 396
Query: 455 KAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANKLLG-TVDLQVMLEQLCESGLIHKAYKL 514
KA K+ + LF M L+G TV ++ ++ A +
Sbjct: 397 KAKKVVDGMELFRDM--------------SRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 456
Query: 515 LMQLVESGVFPDIRTYNILINGFCKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHR 574
Q+V GV P+I TYN L++G CK ++ A +F+ +Q PD TY + +G+ +
Sbjct: 457 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 516
Query: 575 VGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSCRR--KKVSLTFSVWMK 622
G+ ED +F + G KP+ Y ++++ C++ K+ + T + MK
Sbjct: 517 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
BLAST of CmoCh02G006960 vs. TrEMBL
Match:
A0A0A0KD52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134370 PE=4 SV=1)
HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 576/784 (73.47%), Postives = 669/784 (85.33%), Query Frame = 1
Query: 1 MKRRSTFLRPVVTYLVPKPPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIAPHLS 60
MK R RP++ ++VPKP FH +H+ T+PIATS EVSTIIET+DP+ED L++I+ +
Sbjct: 1 MKLRPILFRPIIIHVVPKPTLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIR 60
Query: 61 SDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELK 120
S ITSV+QEQP+ RLGFRLFIWSL+ HL C Q+LII +L+K+NAFELYWK LQELK
Sbjct: 61 SYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELK 120
Query: 121 DSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFL 180
+S+ +ISS+AFSVLIEAYS+AGM EKAV+SFG+M+DF+CKP+++A+NLILH LVR+EAFL
Sbjct: 121 NSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFL 180
Query: 181 LALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIIL 240
LALAVYNQMLKCNLNP+VVTY ILIHG CKT KTQ+ALVLFDEMTDR +LPN+I YSI+L
Sbjct: 181 LALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVL 240
Query: 241 SGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHI 300
SGLCQAKKI DAQRLF KMRASGC+ D+ITYNVLLNGFCK GY D+AF LL+ KDGHI
Sbjct: 241 SGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHI 300
Query: 301 LGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALAL 360
LGV GY CLI+GLFRARRY+EAHMWYQK R+N++PDV+LYTIMI+GL QEGRV EAL L
Sbjct: 301 LGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTL 360
Query: 361 LDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCK 420
L EMTERG PDT CYNA+I+GFCDMG LD+A+SLRLEIS HDCFPNNHTYSILICGMCK
Sbjct: 361 LGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCK 420
Query: 421 NGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLR 480
NGLI++AQH+F EMEKLGCLPSVVTFNSLI+G CKA +L+EA LLFY+MEI RKPSLFLR
Sbjct: 421 NGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLR 480
Query: 481 LSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTN 540
LSQG +K+ LQVM+E+LCESG+I KAYKLLMQLV+SGV PDIRTYNILINGFCK
Sbjct: 481 LSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFG 540
Query: 541 NIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYK 600
NI+GAFKLFK+MQLKG +PDSVTYGTLIDGL+R GR+EDAL IFEQMVK GC PE S YK
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600
Query: 601 SIMTWSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNS 660
+IMTWSCR +SL SVWMKYLR+FRGW+DEKV+VV ESFD +L+ AI R++EMD+ S
Sbjct: 601 TIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKS 660
Query: 661 KDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAV 720
K+F+LAPYTIFLIGL QA R EAFAIFSVLKDFK ISSASCVMLIG LC+ LD+A+
Sbjct: 661 KNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAM 720
Query: 721 EVFLYTLETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKSL 780
+VFL+TLE G LMP ICNQLL +LLHL DRKD A L RMEA GYD+ A+LH+ TK
Sbjct: 721 DVFLFTLERGFRLMPPICNQLLCNLLHL-DRKDDALFLANRMEASGYDLGAHLHYRTKLH 780
Query: 781 LHDH 785
LHDH
Sbjct: 781 LHDH 783
BLAST of CmoCh02G006960 vs. TrEMBL
Match:
F6HKV9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08720 PE=4 SV=1)
HSP 1 Score: 991.5 bits (2562), Expect = 6.1e-286
Identity = 473/780 (60.64%), Postives = 606/780 (77.69%), Query Frame = 1
Query: 12 VTYLVPKPPWFHLFH----TSTDPIATSNEVSTIIETVDPIEDALEIIAPHLSSDVITSV 71
V + +PK F H T+ A SNEV T++ETV+P+EDALE +AP LSS+++ V
Sbjct: 11 VLHFIPKQSRFRCLHANLFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSSEIVNDV 70
Query: 72 IQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELKDSSTEIS 131
++EQ LGFR FIW+ RRR + NL+ID L KD+ F+ YWK L+ELK+S+ +I
Sbjct: 71 MREQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIP 130
Query: 132 SDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFLLALAVYN 191
FSVLI AY+K+GMAEKAV+SFG MKDF CKP+++ YN ILHV+V++E FLLALAVYN
Sbjct: 131 PPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYN 190
Query: 192 QMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLCQAK 251
QMLK N NPN T+ IL++G CK KT +AL +FDEMT + + PN + Y+IILSGLCQAK
Sbjct: 191 QMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAK 250
Query: 252 KIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVKGYS 311
+ DD RL M+ SGC PD IT N LL+GFCKLG DEAFALL+ FEK+G++LG+KGYS
Sbjct: 251 RTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYS 310
Query: 312 CLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEMTER 371
LIDGLFRA+RYDE W +K + +EPDV+LYTI+I+G C+ G V+ AL +L++MT+R
Sbjct: 311 SLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR 370
Query: 372 GFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLIDEA 431
G SPDT CYNA+I+GFCD+GLLDKA+SL+LEIS +DCFP + TY+ILICGMC+NGL+DEA
Sbjct: 371 GLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEA 430
Query: 432 QHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANK 491
+ +FN+ME LGC PS++TFN+LIDG CKAG+L+EA LFYKMEIG+ PSLFLRLSQGA++
Sbjct: 431 RQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADR 490
Query: 492 LLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDGAFK 551
++ T LQ M+E+LCESGLI KAYKLLMQL +SGV PDI TYN+LINGFCK NI+GAFK
Sbjct: 491 VMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFK 550
Query: 552 LFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSC 611
LF+++QLKG PDSVTYGTLIDG HRV R+EDA + +QMVK+GC P +VYK +MTWSC
Sbjct: 551 LFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSC 610
Query: 612 RRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNSKDFELAP 671
R+ K+S+ FS+W+KYLR+ +DE +K+ EE F+KG+LEKA+ ++EM+ +FE+AP
Sbjct: 611 RKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAP 670
Query: 672 YTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAVEVFLYTL 731
YTI+LIGLCQA R EA IF VLK+ + ++ SCVMLI GLC +G L++AV++FLYTL
Sbjct: 671 YTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTL 730
Query: 732 ETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKSLLHDHWKS 788
E G MLMPRICNQLLR L+ L+D+ HA L+ RM + GYD++ YLHH KS L WK+
Sbjct: 731 EKGFMLMPRICNQLLRSLI-LQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKA 789
BLAST of CmoCh02G006960 vs. TrEMBL
Match:
A0A061GXW2_THECC (Pentatricopeptide repeat (PPR) superfamily protein, putative OS=Theobroma cacao GN=TCM_039341 PE=4 SV=1)
HSP 1 Score: 971.5 bits (2510), Expect = 6.5e-280
Identity = 476/795 (59.87%), Postives = 611/795 (76.86%), Query Frame = 1
Query: 1 MKRRSTFLRPVVTYLVPKP-----PWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEII 60
MK S F+RP+ +L K P F F + D + SNE+ +I++ V+P+E ALE +
Sbjct: 1 MKLPSLFVRPIA-HLRSKTSKFLSPNFSSFSSLQD-FSVSNEIHSILDIVNPMEPALEPL 60
Query: 61 APHLSSDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLV-KDNAFELYWK 120
P LS D++TS+IQ+QPN +LGFR FIW+++R+ L SAS L++D L+ KDN F++YW+
Sbjct: 61 LPFLSPDIVTSIIQDQPNPQLGFRFFIWAMQRKRLRSSASDKLVVDMLLRKDNGFDMYWQ 120
Query: 121 TLQELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLV 180
TL+E+K I SDAF VLI YSK G+ EKAV+ FG MKDF+CKP+++ YN IL+V+V
Sbjct: 121 TLEEIKKCGALIVSDAFKVLISGYSKLGLDEKAVECFGKMKDFDCKPDVFTYNTILYVMV 180
Query: 181 RREAFLLALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEI 240
RR+ LLALAVYNQMLK N PN T+SILI G CK KT++AL +FDEMT R + PN
Sbjct: 181 RRKVLLLALAVYNQMLKNNYKPNRATFSILIDGLCKNGKTEDALNMFDEMTQRGIEPNRC 240
Query: 241 TYSIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSF 300
+Y+II+SGLCQA + DDA RL KM+ SGCSPD + YN LLNGFC+LG DEAFALL+SF
Sbjct: 241 SYTIIVSGLCQADRADDACRLLNKMKESGCSPDFVAYNALLNGFCQLGRVDEAFALLQSF 300
Query: 301 EKDGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRV 360
+KDG +LG++GYS I+GLFRARR++EA+ WY K +NV+PDV+LY IM++GL G+V
Sbjct: 301 QKDGFVLGLRGYSSFINGLFRARRFEEAYAWYTKMFEENVKPDVVLYAIMLRGLSVAGKV 360
Query: 361 NEALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSIL 420
+A+ LL EMTERG PDT CYNAVI+GFCD GLLD+A+SL+LEIS++DCFPN TY+IL
Sbjct: 361 EDAMKLLSEMTERGLVPDTYCYNAVIKGFCDTGLLDQARSLQLEISSYDCFPNACTYTIL 420
Query: 421 ICGMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRK 480
I GMC+NGL+ EAQ +F+EMEKLGC PSVVTFN+LIDG KAG+L++AHLLFYKMEIGR
Sbjct: 421 ISGMCQNGLVGEAQQIFDEMEKLGCFPSVVTFNALIDGLSKAGQLEKAHLLFYKMEIGRN 480
Query: 481 PSLFLRLSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILIN 540
PSLFLRLS G++ +L + LQ M+EQL ESG I KAY++LMQL + G PDI TYNILI+
Sbjct: 481 PSLFLRLSHGSSGVLDSSSLQTMVEQLYESGRILKAYRILMQLADGGNVPDIFTYNILIH 540
Query: 541 GFCKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKP 600
GFCK NI+GAFKLFK++QLKG PDSVTYGTLI+G GR+EDA IF+QMVK+GCKP
Sbjct: 541 GFCKAGNINGAFKLFKELQLKGISPDSVTYGTLINGFQMAGREEDAFRIFDQMVKNGCKP 600
Query: 601 EPSVYKSIMTWSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRII 660
+VY+S+MTWSCRR+KVSL F++W+ YLR+ G +D +K VE+ FD+G +EKA+ ++
Sbjct: 601 SVAVYRSLMTWSCRRRKVSLAFNLWLMYLRSLPGRQDTVIKEVEKYFDEGQVEKAVRGLL 660
Query: 661 EMDLNSKDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEG 720
MD F +APYTI+LIGLCQAGRV EA IF +L++ K +++ SCV LI GLC EG
Sbjct: 661 RMDFKLNSFSVAPYTIWLIGLCQAGRVEEALKIFYILEECKVVVTPPSCVRLIVGLCKEG 720
Query: 721 KLDLAVEVFLYTLETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLH 780
LDLAV+VFLYTLE G LMPRICN LL+ LL +D++ HAF L+ +M + YD++AYLH
Sbjct: 721 NLDLAVDVFLYTLEQGFKLMPRICNYLLKSLLRSKDKRMHAFGLLSKMNSQRYDLDAYLH 780
Query: 781 HSTKSLLHDHWKSLK 790
+TKSLL+ HW + K
Sbjct: 781 KTTKSLLYRHWHTWK 793
BLAST of CmoCh02G006960 vs. TrEMBL
Match:
B9SU41_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1215850 PE=4 SV=1)
HSP 1 Score: 968.4 bits (2502), Expect = 5.5e-279
Identity = 472/793 (59.52%), Postives = 607/793 (76.54%), Query Frame = 1
Query: 1 MKRRSTFLRPVVTYLVPKPPWFHLFHT-STDPIATSNEVSTIIETVDPIEDALEIIAPHL 60
MK+ + LR + KPPW FHT S A SNEV TII++V+PIE ALE P L
Sbjct: 1 MKKLRSLLREISR---AKPPWKQHFHTYSAVDFAISNEVLTIIDSVNPIEPALESKVPFL 60
Query: 61 SSDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQEL 120
S ++T +I+ PN+ LGFR FIW+ + R L S N+IID L+KDN FELYW+ L+E+
Sbjct: 61 SPSIVTYIIKNPPNSLLGFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEI 120
Query: 121 KDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAF 180
K IS+DAF+VLI+AY+K M EKAV+SF MMKDF+CKP+++ YN +LHV+VR+E
Sbjct: 121 KRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVV 180
Query: 181 LLALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSII 240
LLAL +YN+MLK N PN+ T+SILI G CK+ KTQ AL +FDEMT R +LPN+ITY+II
Sbjct: 181 LLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTII 240
Query: 241 LSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGH 300
+SGLCQA+K D A RLFI M+ GC PD +TYN LL+GFCKLG DEA LLK FEKD +
Sbjct: 241 ISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRY 300
Query: 301 ILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALA 360
+L +GYSCLIDGLFRARR+++A +WY+K + N++PDVILYTIM++GL + G+ +AL
Sbjct: 301 VLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALR 360
Query: 361 LLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMC 420
LL+EMTERG PDT CYNA+I+G+CD+GLLD+A+SL LEIS +DCF + TY+ILICGMC
Sbjct: 361 LLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMC 420
Query: 421 KNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFL 480
++GL+ +AQ +FNEMEK GC PSVVTFN+LIDGFCKAG +++A LLFYKMEIGR PSLFL
Sbjct: 421 RSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFL 480
Query: 481 RLSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKT 540
RLSQGAN++L T LQ M+EQLC+SGLI KAY +LMQL +SG P+I TYNILI+GFCK
Sbjct: 481 RLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKA 540
Query: 541 NNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVY 600
NI+GAFKLFK++QLKG PDSVTYGTLI+GL R+EDA + +Q++K+GC P VY
Sbjct: 541 GNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVY 600
Query: 601 KSIMTWSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLN 660
KS MTWSCRR K++L FS+W+KYLR+ G E +K VEE+F+KG++E+A+ ++EMD
Sbjct: 601 KSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFK 660
Query: 661 SKDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLA 720
DF+LAPYTI+LIGLCQAGR+ EA IF L++ +++ SCV LI L G LDLA
Sbjct: 661 LNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLA 720
Query: 721 VEVFLYTLETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKS 780
E+FLYT++ G MLMPRICN+LL+ LL ED+++ AF L+ RM++ GYD++++LH +TK
Sbjct: 721 AEIFLYTIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGYDLDSHLHQTTKF 780
Query: 781 LLH---DHWKSLK 790
LL H SLK
Sbjct: 781 LLQGDAGHQVSLK 790
BLAST of CmoCh02G006960 vs. TrEMBL
Match:
V4RKA3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004347mg PE=4 SV=1)
HSP 1 Score: 943.3 bits (2437), Expect = 1.9e-271
Identity = 455/792 (57.45%), Postives = 597/792 (75.38%), Query Frame = 1
Query: 1 MKRRSTFLRPVVT--YLVPK--PPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIA 60
MK S LRP+ + PK PP+ +L S+ +T NEV TI++TV PIE ALE +
Sbjct: 1 MKLPSLLLRPISSAHQFSPKLSPPFHYLHSPSSAESSTINEVLTILDTVTPIEPALEPLL 60
Query: 61 PHLSSDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTL 120
P LS +TSVI + N ++GFR FIW+ +R+ L AS + +I L+K N F+LYW+TL
Sbjct: 61 PFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVIRMLLKPNGFDLYWQTL 120
Query: 121 QELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRR 180
ELK + + SD F VLI Y K G EKA++SFG MK+F+C+P++Y YN +L+++ R+
Sbjct: 121 DELKSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYMYNAVLNIVFRK 180
Query: 181 EAFLLALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITY 240
+ FLLALAVY +M+K N PN+VT+S+LI G K+ KT+ A+ +FDEMT R +LPN+ TY
Sbjct: 181 QLFLLALAVYYEMVKLNCLPNIVTFSLLIDGLSKSGKTEVAIKMFDEMTQRGILPNKFTY 240
Query: 241 SIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEK 300
+I++SGLCQ + D+A RLF+KM+ SGCSPD + YN LLNGFCKL DEA ALL+SFEK
Sbjct: 241 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRGVDEALALLRSFEK 300
Query: 301 DGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNE 360
DG + G+ YSCLIDGLFRA+RYDEA+ WY+K + +EPDV+LY ++I+GL + G+V +
Sbjct: 301 DGFVPGLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVIIRGLSEAGKVKD 360
Query: 361 ALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILIC 420
A+ LL +M++RG PD CYNA+I+GFCD+GLLD+A+SL++EI D PN HT++ILIC
Sbjct: 361 AMKLLSDMSDRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 420
Query: 421 GMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPS 480
GMC+NG++D+AQ +FN+MEK GC PSV TFN+LIDG CKAG+L++A+LLFYKMEIG+ P+
Sbjct: 421 GMCRNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELEKANLLFYKMEIGKNPT 480
Query: 481 LFLRLSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGF 540
LFLRLSQG N++ LQ M+EQ C SGLIHKAYK+LMQL ESG PDI TYNILINGF
Sbjct: 481 LFLRLSQGGNRVHDKASLQTMVEQYCTSGLIHKAYKILMQLAESGNLPDIITYNILINGF 540
Query: 541 CKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEP 600
CK NI+GA KLFK++QLKG PDSVTYGTLI+GL RV R+EDA IFEQM ++GC P P
Sbjct: 541 CKVGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQMPQNGCTPSP 600
Query: 601 SVYKSIMTWSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEM 660
+VYKS+MTWSCRR+K+SL FS+W++YLR+ G DE +K +EE KG +E AI ++EM
Sbjct: 601 AVYKSLMTWSCRRRKISLAFSLWLQYLRDISGRDDESMKSIEEFLQKGKVENAIQGLLEM 660
Query: 661 DLNSKDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKL 720
D DF+LAPYTI+LIGLCQ G+V EAF IFS+L + K I++ SCV LI GLC G L
Sbjct: 661 DFKLNDFQLAPYTIWLIGLCQDGQVKEAFNIFSILVECKAIVTPPSCVKLIHGLCKRGYL 720
Query: 721 DLAVEVFLYTLETGTMLMPRICNQLLRHLLHLED-RKDHAFVLIRRMEAFGYDMNAYLHH 780
DLA++VFLYTL+ +L PR+CN LLR LL +D +K HA+ L+RRM++ GYD++A L+
Sbjct: 721 DLAMDVFLYTLKNDFILRPRVCNYLLRSLLLSKDNKKVHAYHLLRRMKSVGYDLDACLYP 780
Query: 781 STKSLLHDHWKS 788
TKSLL W +
Sbjct: 781 KTKSLLPGPWNT 792
BLAST of CmoCh02G006960 vs. TAIR10
Match:
AT1G79540.1 (AT1G79540.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 789.6 bits (2038), Expect = 1.8e-228
Identity = 395/786 (50.25%), Postives = 537/786 (68.32%), Query Frame = 1
Query: 7 FLRPVVTYLVPKPPWFHLFHTSTDP-IATSNEVSTIIETVDPIEDALEIIAPHLSSDVIT 66
F R V+ + KP W ++S + S EV +I+ PIE ALE + P LS ++IT
Sbjct: 6 FFRSVIQFY-SKPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALEPLVPFLSKNIIT 65
Query: 67 SVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELKDSSTE 126
SVI+++ N +LGFR FIW+ RR L S L+ID L +DN +LYW+TL+ELK
Sbjct: 66 SVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 125
Query: 127 ISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAF-LLALA 186
+ S F VLI AY+K GMAEKAV+SFG MK+F+C+P+++ YN+IL V++R E F +LA A
Sbjct: 126 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFA 185
Query: 187 VYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLC 246
VYN+MLKCN +PN+ T+ IL+ G K +T +A +FD+MT R + PN +TY+I++SGLC
Sbjct: 186 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 245
Query: 247 QAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVK 306
Q DDA++LF +M+ SG PD + +N LL+GFCKLG EAF LL+ FEKDG +LG++
Sbjct: 246 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 305
Query: 307 GYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEM 366
GYS LIDGLFRARRY +A Y +KN++PD+ILYTI+IQGL + G++ +AL LL M
Sbjct: 306 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 365
Query: 367 TERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLI 426
+G SPDT CYNAVI+ C GLL++ +SL+LE+S + FP+ T++ILIC MC+NGL+
Sbjct: 366 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 425
Query: 427 DEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQG 486
EA+ +F E+EK GC PSV TFN+LIDG CK+G+LKEA LL +KME+GR SLFLRLS
Sbjct: 426 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 485
Query: 487 ANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDG 546
N+ T + ESG I KAY+ L ++G PDI +YN+LINGFC+ +IDG
Sbjct: 486 GNRSFDT---------MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 545
Query: 547 AFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMT 606
A KL +QLKG PDSVTY TLI+GLHRVGR+E+A +F KD + P+VY+S+MT
Sbjct: 546 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMT 605
Query: 607 WSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNSKDFE 666
WSCR++KV + F++WMKYL+ DE +E+ F +G+ E+A+ R+IE+D +
Sbjct: 606 WSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELT 665
Query: 667 LAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAVEVFL 726
L PYTI+LIGLCQ+GR EA +FSVL++ K +++ SCV LI GLC +LD A+EVFL
Sbjct: 666 LGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFL 725
Query: 727 YTLETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYL-------HHST 784
YTL+ LMPR+CN LL LL ++ + L RME GY++++ L H
Sbjct: 726 YTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDSMLRFEILKYHRHR 779
BLAST of CmoCh02G006960 vs. TAIR10
Match:
AT1G62930.1 (AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 297.0 bits (759), Expect = 3.6e-80
Identity = 168/516 (32.56%), Postives = 278/516 (53.88%), Query Frame = 1
Query: 95 SQNLIIDRLVKDNAFELYWKTLQELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMM 154
S+N+++D L D+A +L+ + +Q S S F+ L+ A +K + + M
Sbjct: 52 SRNVLLD-LKLDDAVDLFGEMVQ----SRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 111
Query: 155 KDFECKPNIYAYNLILHVLVRREAFLLALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKT 214
++ ++Y+YN++++ RR LALAV +M+K P++VT S L++G+C +
Sbjct: 112 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 171
Query: 215 QEALVLFDEMTDRDVLPNEITYSIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVL 274
EA+ L D+M + PN +T++ ++ GL K +A L +M A GC PD+ TY +
Sbjct: 172 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 231
Query: 275 LNGFCKLGYFDEAFALLKSFEKDGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNV 334
+NG CK G D A +LLK EK V Y+ +ID L + ++A + + K +
Sbjct: 232 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 291
Query: 335 EPDVILYTIMIQGLCQEGRVNEALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQS 394
P+V+ Y +I+ LC GR ++A LL +M ER +P+ ++A+I F G L +A+
Sbjct: 292 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 351
Query: 395 LRLEISNHDCFPNNHTYSILICGMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFC 454
L E+ P+ TYS LI G C + +DEA+H+F M C P+VVT+N+LI GFC
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 411
Query: 455 KAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANKLLG-TVDLQVMLEQLCESGLIHKAYKL 514
KA +++E LF +M L+G TV +++ L ++G A K+
Sbjct: 412 KAKRVEEGMELFREM--------------SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 471
Query: 515 LMQLVESGVFPDIRTYNILINGFCKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHR 574
++V GV PDI TY+IL++G CK ++ A +F+ +Q PD TY +I+G+ +
Sbjct: 472 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 531
Query: 575 VGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSCRR 610
G+ ED +F + G KP +Y ++++ CR+
Sbjct: 532 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
BLAST of CmoCh02G006960 vs. TAIR10
Match:
AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 293.9 bits (751), Expect = 3.1e-79
Identity = 178/632 (28.16%), Postives = 320/632 (50.63%), Query Frame = 1
Query: 102 RLVKDNAFELYWKTLQELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKP 161
+ + D L +K+LQE D SS F +++++YS+ + +KA+ + + P
Sbjct: 109 KTLDDEYASLVFKSLQETYDLCYSTSS-VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP 168
Query: 162 NIYAYNLILHVLVRREAFL-LALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVL 221
+ +YN +L +R + + A V+ +ML+ ++PNV TY+ILI GFC AL L
Sbjct: 169 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 228
Query: 222 FDEMTDRDVLPNEITYSIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCK 281
FD+M + LPN +TY+ ++ G C+ +KIDD +L M G P++I+YNV++NG C+
Sbjct: 229 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 288
Query: 282 LGYFDEAFALLKSFEKDGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVIL 341
G E +L + G+ L Y+ LI G + + +A + + + R + P VI
Sbjct: 289 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 348
Query: 342 YTIMIQGLCQEGRVNEALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEIS 401
YT +I +C+ G +N A+ LD+M RG P+ Y ++ GF G +++A + E++
Sbjct: 349 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 408
Query: 402 NHDCFPNNHTYSILICGMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLK 461
++ P+ TY+ LI G C G +++A V +M++ G P VV++++++ GFC++ +
Sbjct: 409 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 468
Query: 462 EAHLLFYKM-EIGRKPSLFLRLSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVE 521
EA + +M E G KP T+ +++ CE +A L +++
Sbjct: 469 EALRVKREMVEKGIKPD--------------TITYSSLIQGFCEQRRTKEACDLYEEMLR 528
Query: 522 SGVFPDIRTYNILINGFCKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDED 581
G+ PD TY LIN +C +++ A +L +M KG LPD VTY LI+GL++ R +
Sbjct: 529 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 588
Query: 582 ALGIFEQMVKDGCKPEPSVYKSIMTWSCRRKKVSLTFSVWMKYLRNF--RGWKDEKVKVV 641
A + ++ + P Y +++ +C ++ F + ++ F +G E +V
Sbjct: 589 AKRLLLKLFYEESVPSDVTYHTLIE-NCS----NIEFKSVVSLIKGFCMKGMMTEADQVF 648
Query: 642 EESFDKGDLEKAISRIIEMDLNSKDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRI 701
E K N K A Y I + G C+AG + +A+ ++ + +
Sbjct: 649 ESMLGK---------------NHKPDGTA-YNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 704
Query: 702 ISSASCVMLIGGLCVEGKLDLAVEVFLYTLET 730
+ + + + L+ L EGK++ V ++ L +
Sbjct: 709 LHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
BLAST of CmoCh02G006960 vs. TAIR10
Match:
AT1G62670.1 (AT1G62670.1 rna processing factor 2)
HSP 1 Score: 292.0 bits (746), Expect = 1.2e-78
Identity = 160/480 (33.33%), Postives = 260/480 (54.17%), Query Frame = 1
Query: 131 FSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFLLALAVYNQML 190
FS L+ A +K + + M++ N Y Y+++++ RR LALAV +M+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 191 KCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLCQAKKID 250
K PN+VT S L++G+C + + EA+ L D+M PN +T++ ++ GL K
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 251 DAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVKGYSCLI 310
+A L +M A GC PD++TY V++NG CK G D AF LL E+ GV Y+ +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 311 DGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEMTERGFS 370
DGL + + D+A +++ K + P+V+ Y+ +I LC GR ++A LL +M ER +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 371 PDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLIDEAQHV 430
PD ++A+I F G L +A+ L E+ P+ TYS LI G C + +DEA+ +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 431 FNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANKLLG 490
F M C P VVT+N+LI GFCK +++E ME+ R+ S L+G
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG------MEVFREMS--------QRGLVG 443
Query: 491 -TVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDGAFKLF 550
TV ++++ L ++G A ++ ++V GV P+I TYN L++G CK ++ A +F
Sbjct: 444 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 503
Query: 551 KDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSCRR 610
+ +Q P TY +I+G+ + G+ ED +F + G KP+ Y ++++ CR+
Sbjct: 504 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
BLAST of CmoCh02G006960 vs. TAIR10
Match:
AT1G63080.1 (AT1G63080.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 288.5 bits (737), Expect = 1.3e-77
Identity = 170/530 (32.08%), Postives = 271/530 (51.13%), Query Frame = 1
Query: 95 SQNLIIDRLVKDNAFELYWKTLQELKDSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMM 154
S+N ++ L D A +L+ E+ S S FS L+ A +K + + M
Sbjct: 37 SRNALL-HLKLDEAVDLFG----EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM 96
Query: 155 KDFECKPNIYAYNLILHVLVRREAFLLALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKT 214
+ N+Y YN++++ L RR ALA+ +M+K P++VT + L++GFC ++
Sbjct: 97 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 156
Query: 215 QEALVLFDEMTDRDVLPNEITYSIILSGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVL 274
EA+ L D+M + P+ +T++ ++ GL Q K +A L +M GC PD++TY +
Sbjct: 157 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 216
Query: 275 LNGFCKLGYFDEAFALLKSFEKDGHILGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNV 334
+NG CK G D A LL EK V YS +ID L + R D+A + + K +
Sbjct: 217 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 276
Query: 335 EPDVILYTIMIQGLCQEGRVNEALALLDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQS 394
PDV Y+ +I LC GR ++A LL +M ER +P+ +N++I F G L +A+
Sbjct: 277 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 336
Query: 395 LRLEISNHDCFPNNHTYSILICGMCKNGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFC 454
L E+ PN TY+ LI G C + +DEAQ +F M CLP VVT+N+LI+GFC
Sbjct: 337 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 396
Query: 455 KAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANKLLG-TVDLQVMLEQLCESGLIHKAYKL 514
KA K+ + LF M L+G TV ++ ++ A +
Sbjct: 397 KAKKVVDGMELFRDM--------------SRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 456
Query: 515 LMQLVESGVFPDIRTYNILINGFCKTNNIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHR 574
Q+V GV P+I TYN L++G CK ++ A +F+ +Q PD TY + +G+ +
Sbjct: 457 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 516
Query: 575 VGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSCRR--KKVSLTFSVWMK 622
G+ ED +F + G KP+ Y ++++ C++ K+ + T + MK
Sbjct: 517 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
BLAST of CmoCh02G006960 vs. NCBI nr
Match:
gi|449444522|ref|XP_004140023.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Cucumis sativus])
HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 576/784 (73.47%), Postives = 669/784 (85.33%), Query Frame = 1
Query: 1 MKRRSTFLRPVVTYLVPKPPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIAPHLS 60
MK R RP++ ++VPKP FH +H+ T+PIATS EVSTIIET+DP+ED L++I+ +
Sbjct: 1 MKLRPILFRPIIIHVVPKPTLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIR 60
Query: 61 SDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELK 120
S ITSV+QEQP+ RLGFRLFIWSL+ HL C Q+LII +L+K+NAFELYWK LQELK
Sbjct: 61 SYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELK 120
Query: 121 DSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFL 180
+S+ +ISS+AFSVLIEAYS+AGM EKAV+SFG+M+DF+CKP+++A+NLILH LVR+EAFL
Sbjct: 121 NSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFL 180
Query: 181 LALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIIL 240
LALAVYNQMLKCNLNP+VVTY ILIHG CKT KTQ+ALVLFDEMTDR +LPN+I YSI+L
Sbjct: 181 LALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVL 240
Query: 241 SGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHI 300
SGLCQAKKI DAQRLF KMRASGC+ D+ITYNVLLNGFCK GY D+AF LL+ KDGHI
Sbjct: 241 SGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHI 300
Query: 301 LGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALAL 360
LGV GY CLI+GLFRARRY+EAHMWYQK R+N++PDV+LYTIMI+GL QEGRV EAL L
Sbjct: 301 LGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTL 360
Query: 361 LDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCK 420
L EMTERG PDT CYNA+I+GFCDMG LD+A+SLRLEIS HDCFPNNHTYSILICGMCK
Sbjct: 361 LGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCK 420
Query: 421 NGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLR 480
NGLI++AQH+F EMEKLGCLPSVVTFNSLI+G CKA +L+EA LLFY+MEI RKPSLFLR
Sbjct: 421 NGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLR 480
Query: 481 LSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTN 540
LSQG +K+ LQVM+E+LCESG+I KAYKLLMQLV+SGV PDIRTYNILINGFCK
Sbjct: 481 LSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFG 540
Query: 541 NIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYK 600
NI+GAFKLFK+MQLKG +PDSVTYGTLIDGL+R GR+EDAL IFEQMVK GC PE S YK
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600
Query: 601 SIMTWSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNS 660
+IMTWSCR +SL SVWMKYLR+FRGW+DEKV+VV ESFD +L+ AI R++EMD+ S
Sbjct: 601 TIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKS 660
Query: 661 KDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAV 720
K+F+LAPYTIFLIGL QA R EAFAIFSVLKDFK ISSASCVMLIG LC+ LD+A+
Sbjct: 661 KNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAM 720
Query: 721 EVFLYTLETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKSL 780
+VFL+TLE G LMP ICNQLL +LLHL DRKD A L RMEA GYD+ A+LH+ TK
Sbjct: 721 DVFLFTLERGFRLMPPICNQLLCNLLHL-DRKDDALFLANRMEASGYDLGAHLHYRTKLH 780
Query: 781 LHDH 785
LHDH
Sbjct: 781 LHDH 783
BLAST of CmoCh02G006960 vs. NCBI nr
Match:
gi|659112542|ref|XP_008456271.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Cucumis melo])
HSP 1 Score: 1140.6 bits (2949), Expect = 0.0e+00
Identity = 566/792 (71.46%), Postives = 661/792 (83.46%), Query Frame = 1
Query: 1 MKRRSTFLRPVVTYLVPKPPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIAPHLS 60
MK R RP++ ++VPKPP F +H+ T+PI TS EVSTIIETVDP+ED L++I+ ++
Sbjct: 1 MKLRPNLFRPIIIHVVPKPPLFQSYHSRTNPIGTSIEVSTIIETVDPMEDGLKVISSRIT 60
Query: 61 SDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELK 120
S +ITSV+++QPN LGFRLFIWSL H A ++LIID+L+KDNAFELYWK LQELK
Sbjct: 61 SYIITSVLRKQPNTLLGFRLFIWSLESSHFRWRALKHLIIDKLIKDNAFELYWKVLQELK 120
Query: 121 DSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFL 180
+S+ EISSDAFSVLIEAYS+AGM EKAV+SFG+M+DF+CKPN++A+NLIL LVR+EAFL
Sbjct: 121 ESAIEISSDAFSVLIEAYSEAGMEEKAVESFGLMRDFDCKPNLFAFNLILRFLVRKEAFL 180
Query: 181 LALAVYNQMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIIL 240
LALAVYNQMLKCNLNP+V TY ILIHGFC+T KTQ+ALVLFDEMT R +LPN+I Y+I+L
Sbjct: 181 LALAVYNQMLKCNLNPDVDTYGILIHGFCQTCKTQDALVLFDEMTGRGILPNKIIYTIVL 240
Query: 241 SGLCQAKKIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHI 300
SGLC+AKKI DAQRLF M A D+ TYNVLLNGFCKLGY DEAF LL+ KDGH
Sbjct: 241 SGLCRAKKILDAQRLFSMMGAR--RRDLRTYNVLLNGFCKLGYLDEAFTLLQQLIKDGHN 300
Query: 301 LGVKGYSCLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALAL 360
L V GY CLI+GLFRARRY+EAH WY+K R+N++PDVILYTIMIQGL QEGRV A+ L
Sbjct: 301 LEVDGYGCLINGLFRARRYEEAHKWYRKMLRENIKPDVILYTIMIQGLSQEGRVTNAVTL 360
Query: 361 LDEMTERGFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCK 420
L EM ERG PDT CYNA+I+GFCD+G LDKAQSLRLEISNH CFP NHTYSILICGMCK
Sbjct: 361 LGEMKERGLRPDTICYNALIKGFCDIGYLDKAQSLRLEISNHGCFPTNHTYSILICGMCK 420
Query: 421 NGLIDEAQHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLR 480
+GLI EAQH+F EMEKLGCLPSVVTFNSLI+G CKA +L+EA LLFY+MEI RKPSLFLR
Sbjct: 421 SGLITEAQHIFKEMEKLGCLPSVVTFNSLINGLCKASRLEEARLLFYQMEIVRKPSLFLR 480
Query: 481 LSQGANKLLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTN 540
LSQG +K+L LQVM+EQLCESGLI KAYKLLMQLV+SGV PDIRTYNILINGFCK
Sbjct: 481 LSQGTDKVLDIASLQVMMEQLCESGLILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFE 540
Query: 541 NIDGAFKLFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYK 600
NI+GAFKLFK+MQ +G +PDSVTYGTLIDGL+RVGR+EDALGIF QM K GC P+ S Y+
Sbjct: 541 NINGAFKLFKEMQTRGHMPDSVTYGTLIDGLYRVGRNEDALGIFRQMEKKGCVPDSSTYR 600
Query: 601 SIMTWSCRRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNS 660
+IMTW CR K + LT SVWMKYLRNFRGW+DEKV+VVEESFD +L+ AI R++EMD+ S
Sbjct: 601 TIMTWLCREKNIPLTLSVWMKYLRNFRGWEDEKVRVVEESFDNEELQTAIRRLLEMDVKS 660
Query: 661 KDFELAPYTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAV 720
K+F++APYTIFLIGLC+A RVSEAFAIFSV KDFK ISSASCV LI GLC KL+LAV
Sbjct: 661 KNFDVAPYTIFLIGLCKAKRVSEAFAIFSVFKDFKMNISSASCVKLICGLCAVEKLELAV 720
Query: 721 EVFLYTLETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKSL 780
+VFL+TLE +MP ICN+LL HLL L DRKD A L R+EA GYD+ A+L++ TK L
Sbjct: 721 DVFLFTLER-FFVMPPICNRLLCHLLDL-DRKDDALFLANRLEASGYDLGAHLYYRTKLL 780
Query: 781 LHDHWKSLKAKA 793
LHDH +SL+AKA
Sbjct: 781 LHDHLESLQAKA 788
BLAST of CmoCh02G006960 vs. NCBI nr
Match:
gi|645239064|ref|XP_008225970.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Prunus mume])
HSP 1 Score: 1015.4 bits (2624), Expect = 5.7e-293
Identity = 491/777 (63.19%), Postives = 607/777 (78.12%), Query Frame = 1
Query: 8 LRPVVTYLVPKPPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIAPHLSSDVITSV 67
LRP+ +Y PKPPW F+T ++ T+NEV TI+ETV+ +E ALE + P LSS++++ V
Sbjct: 8 LRPI-SYFTPKPPWRRCFNTCSEATVTANEVLTILETVNHMESALEPVVPKLSSEIVSYV 67
Query: 68 IQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELKDSSTEIS 127
I+EQ N RL FR FIW+ +R LC SQ+ +ID LV+D+AFELYW+TL++L+D I
Sbjct: 68 IREQANPRLVFRFFIWATKRMRLCSRMSQSSVIDMLVRDDAFELYWRTLEQLRDCGLPIG 127
Query: 128 SDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFLLALAVYN 187
S AF+VLI Y+K MAEKAV++FG MKDF+C+PN +AYN IL+V+VR+E FLL LAVYN
Sbjct: 128 SAAFAVLINGYAKLDMAEKAVETFGRMKDFDCEPNAFAYNAILYVMVRKELFLLVLAVYN 187
Query: 188 QMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLCQAK 247
QMLK N P+ TY ILI+GFCKT KTQ+AL +FDEMT R + PN ITY+I++SGLCQAK
Sbjct: 188 QMLKSNHTPSRNTYGILINGFCKTRKTQDALQMFDEMTQRGIAPNTITYTIVVSGLCQAK 247
Query: 248 KIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVKGYS 307
+ +A L M+ASGC PD+ITYN LL+G+CK G EA+ALL+SFE+D ++LG+ GY+
Sbjct: 248 RTHEAYTLVEMMKASGCPPDLITYNALLDGYCKSGSIGEAYALLRSFERDDYVLGLNGYT 307
Query: 308 CLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEMTER 367
CLI GLF A R+DEAH WY K +K ++PD++L TI+I+GL GRV +AL L+EM ER
Sbjct: 308 CLIHGLFIAGRFDEAHGWYSKMIKKGIKPDIVLCTIIIRGLSDAGRVKDALNFLNEMNER 367
Query: 368 GFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLIDEA 427
G PD CYNAVI+GFCD+GLLD+A+SL L+IS DCFPN TY+ILICGMCKNGL+ EA
Sbjct: 368 GLVPDAYCYNAVIKGFCDLGLLDEARSLHLDISKLDCFPNACTYTILICGMCKNGLVGEA 427
Query: 428 QHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANK 487
Q +FNEMEKLGC+PSVVTFN+LIDG CKA KL+EAHLLFYKMEIGR PSLFLRLSQG+N+
Sbjct: 428 QQIFNEMEKLGCVPSVVTFNALIDGLCKASKLEEAHLLFYKMEIGRNPSLFLRLSQGSNR 487
Query: 488 LLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDGAFK 547
+ + LQ+ +EQLCESGLI KAYKLL QL +SGV PDI TYNILINGFC+ NI+GAFK
Sbjct: 488 ITDSASLQMKVEQLCESGLILKAYKLLTQLADSGVTPDIITYNILINGFCRAGNINGAFK 547
Query: 548 LFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSC 607
LFKDMQLKG PDS+TYGTLIDGL RV R+EDA +F+QMVK GC P +VYKS+MTWSC
Sbjct: 548 LFKDMQLKGLSPDSITYGTLIDGLQRVDREEDAFVVFDQMVKHGCMPSSAVYKSLMTWSC 607
Query: 608 RRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNSKDFELAP 667
RRKK+SL FS+W+KYL N ++EK+K +EE F +G EKAI ++EMD+N KDF+L P
Sbjct: 608 RRKKISLAFSLWLKYLSNLPLREEEKIKAIEEDFKEGKTEKAIRGVLEMDVNFKDFDLVP 667
Query: 668 YTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAVEVFLYTL 727
TI LIGLCQ RV EA IFSVL ++K I++ SCV LI GLC EG LD A+ VFLYTL
Sbjct: 668 CTILLIGLCQVRRVHEALRIFSVLDEYKVIVTPPSCVHLINGLCKEGNLDQAIGVFLYTL 727
Query: 728 ETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKSLLHDH 785
E G MLMP ICNQLL+ LL +D+KDHA LI RM +FGYD++ YLH +TK LL H
Sbjct: 728 EKGFMLMPEICNQLLKCLLRSQDKKDHALDLISRMRSFGYDLDFYLHQTTKFLLECH 783
BLAST of CmoCh02G006960 vs. NCBI nr
Match:
gi|694371509|ref|XP_009363299.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Pyrus x bretschneideri])
HSP 1 Score: 997.3 bits (2577), Expect = 1.6e-287
Identity = 479/777 (61.65%), Postives = 601/777 (77.35%), Query Frame = 1
Query: 8 LRPVVTYLVPKPPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIAPHLSSDVITSV 67
LRP+ Y KPPW F T ++ T+NE+ TI+ETV+ +EDALE +AP LSSDV+ SV
Sbjct: 8 LRPIC-YFTLKPPWRRHFSTCSEASVTANELLTILETVNGMEDALEPLAPKLSSDVVRSV 67
Query: 68 IQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELKDSSTEIS 127
I+E+ N +L FR FIW+ R LC SQN +ID LV+D+AFELYW+TL+++ + I
Sbjct: 68 IRERVNPQLAFRFFIWATNRMKLCSRMSQNSVIDMLVRDDAFELYWRTLEQISEYGFPIG 127
Query: 128 SDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFLLALAVYN 187
SDAF+VLI Y K EKAV++F M+DF CKPN+ YN ILHVLVR+E FLLALAVYN
Sbjct: 128 SDAFAVLINGYDKLDRVEKAVETFARMRDFNCKPNVSTYNSILHVLVRKEVFLLALAVYN 187
Query: 188 QMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLCQAK 247
QMLK N P TY ILI GFCKT +TQ+AL +FDEMT R + PN +TY+I++SGLCQAK
Sbjct: 188 QMLKSNNRPTRNTYGILIDGFCKTMQTQDALQMFDEMTQRGMAPNTVTYTIVVSGLCQAK 247
Query: 248 KIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVKGYS 307
+ D+A RL M+ SGCSPD+ITY+ LL+G+CK G +A+ALL+SFE+DG++LG+ GY+
Sbjct: 248 RTDEAHRLVNMMKGSGCSPDLITYHALLDGYCKTGRIGDAYALLRSFERDGYVLGLNGYT 307
Query: 308 CLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEMTER 367
CLI GLF+ARR+DEAH WY+K ++ +EPD +L TI+IQGL GRV++AL+ L EM+E+
Sbjct: 308 CLIQGLFKARRFDEAHGWYRKMIKEGIEPDNVLCTIIIQGLSDAGRVHDALSFLSEMSEK 367
Query: 368 GFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLIDEA 427
G PD CYNAVI+GFCD+GLLD+A+SL LE+S DCFPN TY+ILICGMCKNGL+ EA
Sbjct: 368 GLVPDAYCYNAVIKGFCDLGLLDEARSLHLEVSKQDCFPNACTYTILICGMCKNGLVGEA 427
Query: 428 QHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANK 487
Q +FNEMEKLGC+P+V TFN+LIDG CKA L EAHLLFYKMEIGR PSLFLRLSQG ++
Sbjct: 428 QQIFNEMEKLGCVPTVATFNALIDGLCKASLLDEAHLLFYKMEIGRNPSLFLRLSQGVDR 487
Query: 488 LLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDGAFK 547
+ + LQ +EQLCESGLI +AYKLLM+L SGV PDI TYNILINGFCK NI+GAFK
Sbjct: 488 VTDSTSLQTKVEQLCESGLILQAYKLLMKLANSGVTPDIITYNILINGFCKDGNINGAFK 547
Query: 548 LFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSC 607
LFKDMQLKG PDSVTYGTLIDGL RV R+EDA +F+QMVK+GC P +VYK++MTWSC
Sbjct: 548 LFKDMQLKGLSPDSVTYGTLIDGLQRVDREEDAFVVFDQMVKNGCTPSSAVYKALMTWSC 607
Query: 608 RRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNSKDFELAP 667
R++KVSL FS+W+KYLRN ++E++K +EE+F +G +EKAI ++EMD+ K+F LAP
Sbjct: 608 RKQKVSLAFSLWLKYLRNLPSREEEEIKAIEENFKEGKIEKAIRGLLEMDIKFKEFNLAP 667
Query: 668 YTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAVEVFLYTL 727
TI LIG+CQ RV EA IFSVL ++K ++ SCV LI GLC EG LDLA+ VF+YTL
Sbjct: 668 CTILLIGMCQVRRVHEALRIFSVLDEYKVTVTPPSCVHLISGLCKEGNLDLAIGVFIYTL 727
Query: 728 ETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKSLLHDH 785
E G MLMP ICN LL+ LL +D+KDHA L+ RM + GYD+++YL +TK LL H
Sbjct: 728 EKGFMLMPEICNTLLKCLLRSQDKKDHALDLVSRMRSLGYDLDSYLQQTTKFLLQCH 783
BLAST of CmoCh02G006960 vs. NCBI nr
Match:
gi|657960734|ref|XP_008371947.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Malus domestica])
HSP 1 Score: 994.6 bits (2570), Expect = 1.0e-286
Identity = 479/777 (61.65%), Postives = 599/777 (77.09%), Query Frame = 1
Query: 8 LRPVVTYLVPKPPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIAPHLSSDVITSV 67
LRP+ Y KPPW F T ++ T+NE+ TI+ET + IEDALE +AP LSSDV+ SV
Sbjct: 8 LRPIC-YFTLKPPWRRHFSTCSEASVTANELXTILETANGIEDALEPLAPKLSSDVVRSV 67
Query: 68 IQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELKDSSTEIS 127
I+E+ N +L FR FIW+ R LC SQN +ID LV+D+AFELYW+TL+++++ I
Sbjct: 68 IRERVNPQLAFRFFIWATNRMKLCSRMSQNSVIDMLVRDDAFELYWRTLEQIREYGFPIG 127
Query: 128 SDAFSVLIEAYSKAGMAEKAVQSFGMMKDFECKPNIYAYNLILHVLVRREAFLLALAVYN 187
SDAF+VLI Y K EKAV++F MKDF+CKPN+ YN ILHVLVR+E FLLALAVYN
Sbjct: 128 SDAFAVLINGYDKLDRVEKAVETFARMKDFDCKPNVSTYNSILHVLVRKEVFLLALAVYN 187
Query: 188 QMLKCNLNPNVVTYSILIHGFCKTSKTQEALVLFDEMTDRDVLPNEITYSIILSGLCQAK 247
QMLK N P TY ILI GFCKT +TQ+AL +FDEMT R + PN +TY+I++SGLCQAK
Sbjct: 188 QMLKSNNRPTRNTYXILIDGFCKTMQTQDALXMFDEMTQRGMAPNTVTYTIVVSGLCQAK 247
Query: 248 KIDDAQRLFIKMRASGCSPDVITYNVLLNGFCKLGYFDEAFALLKSFEKDGHILGVKGYS 307
+ D+A RL M+ SGCSPD+ITY+ LL+G+CK G +A+ALL+SFE+DG++LG+ GY+
Sbjct: 248 RTDEAHRLVNMMKGSGCSPDLITYHALLDGYCKTGRIGDAYALLRSFERDGYVLGLNGYT 307
Query: 308 CLIDGLFRARRYDEAHMWYQKFSRKNVEPDVILYTIMIQGLCQEGRVNEALALLDEMTER 367
CLI GLF+ARR+DEAH WY+K ++ +E D +L TI+IQGL GRVN+AL+ L EM+E+
Sbjct: 308 CLIQGLFKARRFDEAHGWYRKMIKEGIELDNVLCTIIIQGLSDAGRVNDALSFLSEMSEK 367
Query: 368 GFSPDTTCYNAVIRGFCDMGLLDKAQSLRLEISNHDCFPNNHTYSILICGMCKNGLIDEA 427
G PD CYNAVI+GFCD+GLLD+A+SL LE+S DCFPN TY+ILICGMCKNGL+ EA
Sbjct: 368 GLVPDAYCYNAVIKGFCDLGLLDEARSLHLEVSKQDCFPNACTYTILICGMCKNGLVGEA 427
Query: 428 QHVFNEMEKLGCLPSVVTFNSLIDGFCKAGKLKEAHLLFYKMEIGRKPSLFLRLSQGANK 487
Q +FNEMEKLGC+P+V TFN+LIDG CKA L EAHLLFYKMEIGR PSLFLRLSQG ++
Sbjct: 428 QQIFNEMEKLGCVPTVATFNALIDGLCKASLLDEAHLLFYKMEIGRNPSLFLRLSQGVDR 487
Query: 488 LLGTVDLQVMLEQLCESGLIHKAYKLLMQLVESGVFPDIRTYNILINGFCKTNNIDGAFK 547
+ LQ +EQLCESGLI +AYKLLM+L SGV PDI TYNILINGFCK NI+GAFK
Sbjct: 488 VTDXTSLQTKVEQLCESGLILQAYKLLMKLANSGVTPDIITYNILINGFCKDGNINGAFK 547
Query: 548 LFKDMQLKGRLPDSVTYGTLIDGLHRVGRDEDALGIFEQMVKDGCKPEPSVYKSIMTWSC 607
LFKDMQLKG PDSVTYGTLIDGL RV R+ED +F+QMVK+GC P +VYK++MTWSC
Sbjct: 548 LFKDMQLKGLSPDSVTYGTLIDGLQRVDREEDXFVVFDQMVKNGCXPSSAVYKALMTWSC 607
Query: 608 RRKKVSLTFSVWMKYLRNFRGWKDEKVKVVEESFDKGDLEKAISRIIEMDLNSKDFELAP 667
R++KVSL FS+W+KYLRN ++E++K +EE+F +G +EKAI ++EMD+ K+F LAP
Sbjct: 608 RKQKVSLAFSLWLKYLRNLPSREEEEIKEIEENFKEGKIEKAIRGLLEMDIKFKEFNLAP 667
Query: 668 YTIFLIGLCQAGRVSEAFAIFSVLKDFKRIISSASCVMLIGGLCVEGKLDLAVEVFLYTL 727
TI LIG+CQ RV EA IFSVL ++K ++ SCV LI GLC EG LDLA+ VF+YTL
Sbjct: 668 CTILLIGMCQVRRVHEALRIFSVLDEYKVTVTPPSCVHLISGLCKEGNLDLAIGVFIYTL 727
Query: 728 ETGTMLMPRICNQLLRHLLHLEDRKDHAFVLIRRMEAFGYDMNAYLHHSTKSLLHDH 785
E G MLMP ICN LL+ LL +D+KDHA L+ RM + GYD+++YL +TK LL H
Sbjct: 728 EKGFMLMPEICNTLLKCLLRSQDKKDHALDLVSRMRSLGYDLDSYLQQTTKFLLQCH 783
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP133_ARATH | 3.2e-227 | 50.25 | Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana GN... | [more] |
| PPR96_ARATH | 6.4e-79 | 32.56 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
| PP407_ARATH | 5.4e-78 | 28.16 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... | [more] |
| PPR91_ARATH | 2.1e-77 | 33.33 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
| PPR98_ARATH | 2.3e-76 | 32.08 | Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KD52_CUCSA | 0.0e+00 | 73.47 | Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134370 PE=4 SV=1 | [more] |
| F6HKV9_VITVI | 6.1e-286 | 60.64 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08720 PE=4 SV=... | [more] |
| A0A061GXW2_THECC | 6.5e-280 | 59.87 | Pentatricopeptide repeat (PPR) superfamily protein, putative OS=Theobroma cacao ... | [more] |
| B9SU41_RICCO | 5.5e-279 | 59.52 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| V4RKA3_9ROSI | 1.9e-271 | 57.45 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004347mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G79540.1 | 1.8e-228 | 50.25 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G62930.1 | 3.6e-80 | 32.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G39710.1 | 3.1e-79 | 28.16 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G62670.1 | 1.2e-78 | 33.33 | rna processing factor 2 | [more] |
| AT1G63080.1 | 1.3e-77 | 32.08 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
