CmoCh02G006730 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G006730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Centrosomal protein
Location	Cmo_Chr02 : 4237526 .. 4239400 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATGGCATTGTTTTTCGTTTTTCATACAGTTTTGTCTTGAAATTGTCTTCTTTTTCTGTTGTTAATTGTTTTGATCTATGAAATTATAGATCTAAGGCCAAAACAAAGCTAAATTCAAACCGTAGGATTAAATTTCTCACAAACGAGGGCGAAGAATGTCGTTTCTGTGGGAGAAGAGCGAGTCATGGAGATGGATAGTGAGGAAAACCAGAGATTCAAAGCCTTTCTTCTTGGCCTTCGCCACCGTCTGCGGCGTCGTTCCCGGCGTTATTGGCTACTGCGTTATGCAGGCCACCAATTCCCGCAACGAGCAACTCGAAGCCCGCCTCCGCCAGAATGCTAGACCTGAATCTCTCGTATGTCCTTTCTCTCTCCAAAACCCTATTATCATCGCAATCTTGATCCATATATCTCTGATTGAGTTTAGTTTATTGATAAATTTCTGTCCGTTGGACATTTCGCGACTCCGCGATCGCGTAAAATTCGACTTGCTGCTCTACTGTGATGATTATTATCTATTTATTCCATGGACTTACCTGATTATTCGATTGAAAACCTAAGATTTTTCTTTTTTCAATTTTGTTCTTGAGTTGCCTGCTATGTTTGAATCTGTTTTCCTTGATCAGACCTCTAATTTCCATGGTGTCGGTGTTAACAATTCGAAATGCCGCATTCTGTTTTGTCATTTGAAATGACGCCTCATTCAGTATACGAAGAACACAGCATTCAGTTTCTTTCTTCTGACCAGTTATTCTCTTCTGCACCTTGTCATTTGAGCTGCATCGAATTTGCTGGCTGTTGCTTTGCTTTCATGTGTTTCAACACCTATTTTCGTACTATATTTTCGTTAACTGCTTCCATCTTTTGAGACTTTGATCATTGCTGCATTTGTAAAACTATAACCTGTTGGTAAATATTTTTTGTTTCTGAATTTTGGAAATTCAACTTGTTTTCACATCAAATCAATTCTCTACCATGAGTTTTATCCGAATTCGTAACCAAATTCCTAGAACTCCCTTTTTGGAATTCAAAACTTGGATGACAAAACAAGGAATCCATAGGTGGAGGTAGTCTAAAACAACGAACCGAATGGTTATCAAACGGAGTTAGATATTTTGAATTCGTGGGGCTGTTGGAACTTATATGTATTAAATTTATGTGAGATCTCACATCGGTTGGGTAGGAGAACGAAACATTCTTTATAAGAGTGAGTAAACCTCCTAGCTTTATAAGAGTGGGTAAACCTCCTAGTAGACGCGTTTTAGAAAACCCGAAAAGAAAAGTCTAAAGAGGACAATATTTGCTAATAGGGGGCTTGGGAGTCCCGTTACTGTAACTGTCTGCAGTCGTAAGTTTAATCTTACATGTTACAATTGTGTTCATCAGGTATTTTGCTTCTCAATGTTTGTGGTTTTGTTACTTGATATTGAAATTCAGATGATGGGGAGAGTGAATCGAGAGAGACTGGCAGAATATCTAGGCGAGTTGCAGAGGAAAGAGGACACAAACGATCGCTATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGTGAGAATCCAACCAATCCCCCCAAACCAAAGCAACGAGGTCGCTGACAAGAACCAACAGGTCAAGAAGGAAAATAAATAAACGGGTACGTGTGGGTTAGATTTTGTAATGCAATCTTACTGTTTTAGGGTTTGTTTATCCTTGCAGGACAGGCTCTTAAAGCTTAAGAACTTTGTATCCGGAGGCCTTGTTTAATTCAAATGCTTTATGTTACTATGGAGTTAGTCCTCGTACTCATTGACAAGCTCTGTCAAGCTAATGGCAATTTCATAAAATTTGACTAATGATTCACTAAACTTCACATTCGGTCCAG

mRNA sequence

CCAATGGCATTGTTTTTCGTTTTTCATACAGTTTTGTCTTGAAATTGTCTTCTTTTTCTGTTGTTAATTGTTTTGATCTATGAAATTATAGATCTAAGGCCAAAACAAAGCTAAATTCAAACCGTAGGATTAAATTTCTCACAAACGAGGGCGAAGAATGTCGTTTCTGTGGGAGAAGAGCGAGTCATGGAGATGGATAGTGAGGAAAACCAGAGATTCAAAGCCTTTCTTCTTGGCCTTCGCCACCGTCTGCGGCGTCGTTCCCGGCGTTATTGGCTACTGCGTTATGCAGGCCACCAATTCCCGCAACGAGCAACTCGAAGCCCGCCTCCGCCAGAATGCTAGACCTGAATCTCTCATGATGGGGAGAGTGAATCGAGAGAGACTGGCAGAATATCTAGGCGAGTTGCAGAGGAAAGAGGACACAAACGATCGCTATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGTGAGAATCCAACCAATCCCCCCAAACCAAAGCAACGAGGTCGCTGACAAGAACCAACAGGTCAAGAAGGAAAATAAATAAACGGGTACGTGTGGGTTAGATTTTGTAATGCAATCTTACTGTTTTAGGGTTTGTTTATCCTTGCAGGACAGGCTCTTAAAGCTTAAGAACTTTGTATCCGGAGGCCTTGTTTAATTCAAATGCTTTATGTTACTATGGAGTTAGTCCTCGTACTCATTGACAAGCTCTGTCAAGCTAATGGCAATTTCATAAAATTTGACTAATGATTCACTAAACTTCACATTCGGTCCAG

Coding sequence (CDS)

ATGTCGTTTCTGTGGGAGAAGAGCGAGTCATGGAGATGGATAGTGAGGAAAACCAGAGATTCAAAGCCTTTCTTCTTGGCCTTCGCCACCGTCTGCGGCGTCGTTCCCGGCGTTATTGGCTACTGCGTTATGCAGGCCACCAATTCCCGCAACGAGCAACTCGAAGCCCGCCTCCGCCAGAATGCTAGACCTGAATCTCTCATGATGGGGAGAGTGAATCGAGAGAGACTGGCAGAATATCTAGGCGAGTTGCAGAGGAAAGAGGACACAAACGATCGCTATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGTGAGAATCCAACCAATCCCCCCAAACCAAAGCAACGAGGTCGCTGACAAGAACCAACAGGTCAAGAAGGAAAATAAATAA

Homology

[Close]

BLAST of CmoCh02G006730 vs. TrEMBL
Match: A0A0A0KEE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G135430 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.9e-58
Identity = 115/134 (85.82%), Postives = 123/134 (91.79%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRW+VRKTRDSK FF  FATVCG+VPG+IGYCVMQATNS NEQLEARLRQ
Sbjct: 1   MSILWEKSETWRWVVRKTRDSKSFFFTFATVCGLVPGLIGYCVMQATNSTNEQLEARLRQ 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
           NARPESLMMG+VNRERLAEYLGELQRKEDTNDRYVAAL G+TLTRKPYVRIQPI PNQSN
Sbjct: 61  NARPESLMMGQVNRERLAEYLGELQRKEDTNDRYVAALEGKTLTRKPYVRIQPI-PNQSN 120

Query: 121 EVADKNQQVKKENK 135
           +   K QQ+KKENK
Sbjct: 121 DATVKEQQIKKENK 133

[Close]

BLAST of CmoCh02G006730 vs. TrEMBL
Match: A0A067KW35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09504 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-54
Identity = 107/134 (79.85%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRW+VRKTRDSKPFF  FAT+CGVVPGVIGYCVMQATNSRN +LE+ LRQ
Sbjct: 1   MSILWEKSETWRWLVRKTRDSKPFFFTFATICGVVPGVIGYCVMQATNSRNPELESHLRQ 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
           NARPESLMMG+VN+ERLAEYLGELQRK+DTNDRYVAALRGETLTR PYVRIQPIP   + 
Sbjct: 61  NARPESLMMGKVNQERLAEYLGELQRKQDTNDRYVAALRGETLTRNPYVRIQPIPKQGNM 120

Query: 121 EVADKNQQVKKENK 135
           E A  N+Q++K+ K
Sbjct: 121 ETA--NEQIEKDKK 132

[Close]

BLAST of CmoCh02G006730 vs. TrEMBL
Match: V4SEV4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006210mg PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-53
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGV+GYCVMQATNSRN QLEA LR+
Sbjct: 1   MSVLWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVVGYCVMQATNSRNPQLEAELRR 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
            ARP+SLMMG+VNRERLAEYLGELQRKEDTNDRYVAALRGETL RKPY RIQPI P ++ 
Sbjct: 61  TARPDSLMMGQVNRERLAEYLGELQRKEDTNDRYVAALRGETLIRKPYERIQPI-PKENT 120

Query: 121 EVADKNQQ 129
            VAD+ Q+
Sbjct: 121 TVADRPQE 127

[Close]

BLAST of CmoCh02G006730 vs. TrEMBL
Match: A0A067FE69_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041980mg PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-53
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGV+GYCVMQATNSRN QLEA LR+
Sbjct: 1   MSVLWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVVGYCVMQATNSRNPQLEAELRR 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
            ARP+SLMMG+VNRERLAEYLGELQRKEDTNDRYVAALRGETL RKPY RIQPI P ++ 
Sbjct: 61  TARPDSLMMGQVNRERLAEYLGELQRKEDTNDRYVAALRGETLIRKPYERIQPI-PKENT 120

Query: 121 EVADKNQQ 129
            VAD+ Q+
Sbjct: 121 TVADRPQE 127

[Close]

BLAST of CmoCh02G006730 vs. TrEMBL
Match: A0A059C0H9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04477 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.9e-53
Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKS +WRW+VRKTRDSKPFFLAFATVCGVVPGVIGYCVMQAT+SR EQLEARLRQ
Sbjct: 1   MSILWEKSGTWRWLVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATSSRTEQLEARLRQ 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQS- 120
            ARP+SLMMG+VNR+RLAEYLGELQRKEDTNDRYVAAL+GETLTR PYVRIQP+P   S 
Sbjct: 61  TARPDSLMMGKVNRDRLAEYLGELQRKEDTNDRYVAALKGETLTRNPYVRIQPVPKQDSG 120

Query: 121 -NEVADKNQQVK 131
            NE A   ++ K
Sbjct: 121 ANEAAKAEEKKK 132

[Close]

BLAST of CmoCh02G006730 vs. TAIR10
Match: AT1G79390.1 (AT1G79390.1 unknown protein)

HSP 1 Score: 184.9 bits (468), Expect = 3.3e-47
Identity = 86/115 (74.78%), Postives = 104/115 (90.43%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MSF++EKS +WRW+V KTRDS+ FF  FA +CGV+PGVIGY VMQ TNS N +LEARLR+
Sbjct: 1   MSFMYEKSNTWRWLVMKTRDSRSFFFTFAALCGVIPGVIGYGVMQVTNSSNPELEARLRK 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIP 116
           +ARP++LMMG+VN+ERLAEYLGEL++K+DTNDRYVAALRGETLTRKPY RIQP+P
Sbjct: 61  SARPDTLMMGKVNQERLAEYLGELKQKQDTNDRYVAALRGETLTRKPYQRIQPMP 115

[Close]

BLAST of CmoCh02G006730 vs. NCBI nr
Match: gi|449444302|ref|XP_004139914.1| (PREDICTED: uncharacterized protein LOC101217822 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57
Identity = 115/134 (85.82%), Postives = 123/134 (91.79%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRW+VRKTRDSK FF  FATVCG+VPG+IGYCVMQATNS NEQLEARLRQ
Sbjct: 1   MSILWEKSETWRWVVRKTRDSKSFFFTFATVCGLVPGLIGYCVMQATNSTNEQLEARLRQ 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
           NARPESLMMG+VNRERLAEYLGELQRKEDTNDRYVAAL G+TLTRKPYVRIQPI PNQSN
Sbjct: 61  NARPESLMMGQVNRERLAEYLGELQRKEDTNDRYVAALEGKTLTRKPYVRIQPI-PNQSN 120

Query: 121 EVADKNQQVKKENK 135
           +   K QQ+KKENK
Sbjct: 121 DATVKEQQIKKENK 133

[Close]

BLAST of CmoCh02G006730 vs. NCBI nr
Match: gi|659112605|ref|XP_008456280.1| (PREDICTED: uncharacterized protein LOC103496274 [Cucumis melo])

HSP 1 Score: 225.7 bits (574), Expect = 4.8e-56
Identity = 113/134 (84.33%), Postives = 121/134 (90.30%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRW+VRKTRDSK FF  FAT CG+VP +IGYCVMQATNS NEQLEARLRQ
Sbjct: 1   MSILWEKSETWRWLVRKTRDSKSFFFTFATACGLVPCLIGYCVMQATNSTNEQLEARLRQ 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
           NARPESLMMG+VNRERLAEYLGELQRKEDTNDRYVAAL G+TLTRKPYVRIQPI PNQSN
Sbjct: 61  NARPESLMMGQVNRERLAEYLGELQRKEDTNDRYVAALEGKTLTRKPYVRIQPI-PNQSN 120

Query: 121 EVADKNQQVKKENK 135
           +   K QQ+KKENK
Sbjct: 121 DATVKEQQIKKENK 133

[Close]

BLAST of CmoCh02G006730 vs. NCBI nr
Match: gi|802607800|ref|XP_012073996.1| (PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas])

HSP 1 Score: 219.2 bits (557), Expect = 4.5e-54
Identity = 107/134 (79.85%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRW+VRKTRDSKPFF  FAT+CGVVPGVIGYCVMQATNSRN +LE+ LRQ
Sbjct: 1   MSILWEKSETWRWLVRKTRDSKPFFFTFATICGVVPGVIGYCVMQATNSRNPELESHLRQ 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
           NARPESLMMG+VN+ERLAEYLGELQRK+DTNDRYVAALRGETLTR PYVRIQPIP   + 
Sbjct: 61  NARPESLMMGKVNQERLAEYLGELQRKQDTNDRYVAALRGETLTRNPYVRIQPIPKQGNM 120

Query: 121 EVADKNQQVKKENK 135
           E A  N+Q++K+ K
Sbjct: 121 ETA--NEQIEKDKK 132

[Close]

BLAST of CmoCh02G006730 vs. NCBI nr
Match: gi|567859236|ref|XP_006422301.1| (hypothetical protein CICLE_v10006210mg [Citrus clementina])

HSP 1 Score: 216.9 bits (551), Expect = 2.2e-53
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGV+GYCVMQATNSRN QLEA LR+
Sbjct: 1   MSVLWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVVGYCVMQATNSRNPQLEAELRR 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSN 120
            ARP+SLMMG+VNRERLAEYLGELQRKEDTNDRYVAALRGETL RKPY RIQPI P ++ 
Sbjct: 61  TARPDSLMMGQVNRERLAEYLGELQRKEDTNDRYVAALRGETLIRKPYERIQPI-PKENT 120

Query: 121 EVADKNQQ 129
            VAD+ Q+
Sbjct: 121 TVADRPQE 127

[Close]

BLAST of CmoCh02G006730 vs. NCBI nr
Match: gi|702383588|ref|XP_010064098.1| (PREDICTED: uncharacterized protein LOC104451044 [Eucalyptus grandis])

HSP 1 Score: 214.9 bits (546), Expect = 8.4e-53
Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 1


Query: 1   MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
           MS LWEKS +WRW+VRKTRDSKPFFLAFATVCGVVPGVIGYCVMQAT+SR EQLEARLRQ
Sbjct: 1   MSILWEKSGTWRWLVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATSSRTEQLEARLRQ 60

Query: 61  NARPESLMMGRVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQS- 120
            ARP+SLMMG+VNR+RLAEYLGELQRKEDTNDRYVAAL+GETLTR PYVRIQP+P   S 
Sbjct: 61  TARPDSLMMGKVNRDRLAEYLGELQRKEDTNDRYVAALKGETLTRNPYVRIQPVPKQDSG 120

Query: 121 -NEVADKNQQVK 131
            NE A   ++ K
Sbjct: 121 ANEAAKAEEKKK 132

The following BLAST results are available for this feature:

BLAST of CmoCh02G006730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh02G006730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEE2_CUCSA	7.9e-58	85.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G135430 PE=4 SV=1	[more]
A0A067KW35_JATCU	3.1e-54	79.85	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09504 PE=4 SV=1	[more]
V4SEV4_9ROSI	1.5e-53	84.38	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006210mg PE=4 SV=1	[more]
A0A067FE69_CITSI	1.5e-53	84.38	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041980mg PE=4 SV=1	[more]
A0A059C0H9_EUCGR	5.9e-53	81.06	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04477 PE=4 SV=1	[more]

BLAST of CmoCh02G006730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79390.1	3.3e-47	74.78	unknown protein	[more]

BLAST of CmoCh02G006730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444302\|ref\|XP_004139914.1\|	1.1e-57	85.82	PREDICTED: uncharacterized protein LOC101217822 [Cucumis sativus]	[more]
gi\|659112605\|ref\|XP_008456280.1\|	4.8e-56	84.33	PREDICTED: uncharacterized protein LOC103496274 [Cucumis melo]	[more]
gi\|802607800\|ref\|XP_012073996.1\|	4.5e-54	79.85	PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]	[more]
gi\|567859236\|ref\|XP_006422301.1\|	2.2e-53	84.38	hypothetical protein CICLE_v10006210mg [Citrus clementina]	[more]
gi\|702383588\|ref\|XP_010064098.1\|	8.4e-53	81.06	PREDICTED: uncharacterized protein LOC104451044 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G006730.1	CmoCh02G006730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36338	FAMILY NOT NAMED	coord: 2..133 score: 9.5
None	No IPR available	PANTHER	PTHR36338:SF1	SUBFAMILY NOT NAMED	coord: 2..133 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G006730	Cucsa.118650	Cucumber (Gy14) v1	cgycmoB0302
CmoCh02G006730	CmaCh02G006720	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G006730	Cla013442	Watermelon (97103) v1	cmowmB577
CmoCh02G006730	Csa6G135430	Cucumber (Chinese Long) v2	cmocuB622
CmoCh02G006730	MELO3C019617	Melon (DHL92) v3.5.1	cmomeB539
CmoCh02G006730	ClCG02G018790	Watermelon (Charleston Gray)	cmowcgB525
CmoCh02G006730	CSPI06G10960	Wild cucumber (PI 183967)	cmocpiB629
CmoCh02G006730	Lsi10G015060	Bottle gourd (USVL1VR-Ls)	cmolsiB532
CmoCh02G006730	Cp4.1LG05g10280	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G006730	MELO3C019617.2	Melon (DHL92) v3.6.1	cmomedB603
CmoCh02G006730	CsaV3_6G013400	Cucumber (Chinese Long) v3	cmocucB0742
CmoCh02G006730	Cla97C02G044710	Watermelon (97103) v2	cmowmbB588
CmoCh02G006730	Bhi10G000723	Wax gourd	cmowgoB0746
CmoCh02G006730	CsGy6G011100	Cucumber (Gy14) v2	cgybcmoB800

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G006730	Cucurbita pepo (Zucchini)	cmocpeB574
CmoCh02G006730	Silver-seed gourd	carcmoB0467
CmoCh02G006730	Silver-seed gourd	carcmoB1422
CmoCh02G006730	Cucurbita moschata (Rifu)	cmocmoB403
CmoCh02G006730	Cucurbita maxima (Rimu)	cmacmoB553