CmoCh02G006580 (gene) Cucurbita moschata (Rifu)

NameCmoCh02G006580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(ATP-dependent RNA helicase) (3.6.4.13)
LocationCmo_Chr02 : 4150155 .. 4153407 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGTTCAACAATTCCGTTTTACTGGTCGCCAACAAGCCTTCCACTGTCGAGAAAAGAGATAAATTGGCCGTGAATCCATCAAATTTTTGCTGCGATTGTTCAAACCTGGAAACCCTTTGAATTGTTGTTCATCATCTCTGATTTCATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCTCTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGCTGTTTCCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGATTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACCCCTTTCGGCGTCTTTGCGTTGGTCGTCACTCCCACAAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGGTTCGTTGCTTGTATTGTTCTTATTGTTCATGTTCTCATAGCTTTCAAGAACATGAAATTCTCAGGCAAATATATACCAATCTGGTTGTGTTCTTGATATCTTATTGATCTTTTTATACACCAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAGGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCAAAGAATGTGAAGGATGTTTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGCGTTCGATCAGCAATCATATTTGTGCACACTTGCAAGTATGTTTTTTGGGCTTTCACCTCCCATTGTTCCTTGTTTCTCTCATTGCTTACTCTTTCTTAAACTATATGCAGAAGCTGTCACCATTTAGGTTTGTTACTCGGAGAACTTGATCAAGATGTGGTGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTGCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCGACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTAATTGATTTCATGTGGTTAAGTAGAAATGTTTCTAGAATGCTGGTGATGTTAATATAACAACATTATGACTCAGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGGTGAGTGTTACTTAAGTGATTGATAACTTTTTAACTCGATTTGTTTCTTGGACGCGAACTCCGCATCGAATGTCAAGGAATTTCTCTATAAACTTGTTTTTTTTATATATATGGAGTGAATAGTAAGTCTGCTTAAGCTTGTATTATATTCATAACATAGTAGTTGTTCTTGCTATTGCTTCTATATTCAACCTTCTCCAATTCACAAGGGCTATTCTTAAAGAAAGTTGTGATGGTAAATGCTGATTCGTAACTACAATTTCATAATCTCGATGGTATATACATGTAGGAAAGTAGTATATTGCTAATGTTTTTGTTTTCGTCGCTCCAAGCAAGTGTTTTTTTCGTTGGATTTTCTTGTTTTTCTTACCTTCGATGAATGTCGATCTCGTATACAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATGCTTTGGCCTTTTCCCCCCTAATATGATTGATTTTTTCAGTGTATTATATGCTGTTTGCCAATTGAACTTCACAACTCATCTCATCTGAGTGGTTAACTTCTGAATGCGGACGTTTTCCTTTAAAAAGTGGAAATAAAACATGTAGACTTCACAAGTCGAGTTCATGCTACTGAGGAAAAACGAGATTCCTGCACTCTAATTAGTACATCATGGAGCTTCCTAGTGAATTGCTTTGCTATAGTCACTCTGTGTATGAAGACATCTGTTCTTGGGGAAATCACTCTAGAGTTATTGTACGGCCCAAGCCCACCGTCAGTAGTTATTGTCCTCTTTGGGCTGTCCCTTTTGGGCTTCCCCTCAAGGTTTTTAAAATGCCTCTACTAGGGAGAGGTTTCCATACCCTTATAAAGAATGCTTCATTCTCCTCCCCAATCGATGTGGGATCTCACCGGCACAGTTTTTCTAGTGTTATGACTTATGGGAACAATTATTTGCTGTAATAAGATCAGCCTAGATACTTGTTTCAGTCTAGAGCTTATGAGTTTTCTTATCTCTTCAGTCGTATCAGTCATTTTTCAGCTCAACTACCAGTAAATTTAGACCAAACACTAGAGATACCGCCATGTCGATATGATGGGACACTGTTTCAGTAGCTCATAGGCTCCAGAGATACCGAACACTAGAGATACGAAACACTAAATGTATGCATGAAATGACTATATTACTTAAAAAATTACTAATCTTCTCAACATTGGGGATTTTAGCATTTCTTGTCTGCATACCAGAAGTGAATTTGAGCGAGATTAACTCGTGTTTGCAACGTTTGTACACAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAATATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAAAAAGCTTCCAAGGAGTTGGGAGCAGTATGAGAAAATCTGTACCACATCAAAATTTTGATATTTCACTAACTCAATACATCTGTGATTATTATTATTGCTTTTGGGTCTTTAGCAG

mRNA sequence

TAGTTCAACAATTCCGTTTTACTGGTCGCCAACAAGCCTTCCACTGTCGAGAAAAGAGATAAATTGGCCGTGAATCCATCAAATTTTTGCTGCGATTGTTCAAACCTGGAAACCCTTTGAATTGTTGTTCATCATCTCTGATTTCATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCTCTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGCTGTTTCCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGATTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACCCCTTTCGGCGTCTTTGCGTTGGTCGTCACTCCCACAAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAGGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCAAAGAATGTGAAGGATGTTTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGCGTTCGATCAGCAATCATATTTGTGCACACTTGCAAAAGCTGTCACCATTTAGGTTTGTTACTCGGAGAACTTGATCAAGATGTGGTGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTGCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCGACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAATATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAAAAAGCTTCCAAGGAGTTGGGAGCAGTATGAGAAAATCTGTACCACATCAAAATTTTGATATTTCACTAACTCAATACATCTGTGATTATTATTATTGCTTTTGGGTCTTTAGCAG

Coding sequence (CDS)

ATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCTCTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGCTGTTTCCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGATTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACCCCTTTCGGCGTCTTTGCGTTGGTCGTCACTCCCACAAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAGGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCAAAGAATGTGAAGGATGTTTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGCGTTCGATCAGCAATCATATTTGTGCACACTTGCAAAAGCTGTCACCATTTAGGTTTGTTACTCGGAGAACTTGATCAAGATGTGGTGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTGCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCGACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAATATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAAAAAGCTTCCAAGGAGTTGGGAGCAGTATGA
BLAST of CmoCh02G006580 vs. Swiss-Prot
Match: RH36_ARATH (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana GN=RH36 PE=2 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 3.1e-172
Identity = 318/473 (67.23%), Postives = 386/473 (81.61%), Query Frame = 1

Query: 25  SQKNPTAAAVSAAVDNTAEKAPIQIEKSTEL-----TTKSTNVTFADLGLSEWIVQTCKE 84
           S+KNP       +    +++   Q EK T       TT +TN  F  LGL+EW V+TCKE
Sbjct: 18  SRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATN--FEGLGLAEWAVETCKE 77

Query: 85  LAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPT 144
           L M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFALPIL +L+E P+GVFALVVTPT
Sbjct: 78  LGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPT 137

Query: 145 RELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENP 204
           RELA+QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLLE NP
Sbjct: 138 RELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNP 197

Query: 205 DIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELS 264
           D+P VFS+TKFLVLDEADRVLDVGF++EL+ IF+CLP++RQTLLFSATMT +L+ LLE S
Sbjct: 198 DVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHS 257

Query: 265 ANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGVRSAIIFVHTCKSC 324
           +NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI+S+M+D G+RSA+IFV TC++C
Sbjct: 258 SNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTC 317

Query: 325 HHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVLLATDVASRGLDIPTVDLVI 384
             L L+L EL+ + +A+HS  SQS RL+AL +FKSG+ P+LLATDVASRGLDIPTVDLVI
Sbjct: 318 QRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVI 377

Query: 385 NYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENE 444
           NYDIPR  PRDYVHRVGRTARAGR GLAVS IT+ DV+LIH+IE  +GKK+E +  K   
Sbjct: 378 NYDIPR-DPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVIT 437

Query: 445 VLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAEKGLLKKRSRKRR 493
               VTKV KA+RVA MKM+D+GFE+KVK+R+K K K LA+KGLLKKR ++++
Sbjct: 438 DSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

BLAST of CmoCh02G006580 vs. Swiss-Prot
Match: RH36_ORYSJ (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica GN=Os07g0633500 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 8.7e-143
Identity = 271/501 (54.09%), Postives = 355/501 (70.86%), Query Frame = 1

Query: 11  FPLFSKSHRKTHKPSQK----------NPTAAAVSAAVD------NTAEKAPIQIEKSTE 70
           F LFSK      KP Q+           P   + S A++      + A  A +      +
Sbjct: 10  FLLFSKPKSSKKKPKQEAEPQVHTQPEEPPNPSPSPAIEPDLRDSDEAPAAAVTEHAGDD 69

Query: 71  LTTKSTNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTA 130
               +   TFA+LGLS+W+V  C  L M+ PTAVQ  CIP+ L G DVLG+A+TGSGKTA
Sbjct: 70  AAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTA 129

Query: 131 AFALPILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQT 190
           AFALPIL +L E P+GV AL + PTRELA QLAEQFRALG+ L LRC   +GG D L Q 
Sbjct: 130 AFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQA 189

Query: 191 QSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKC 250
           + L +RPH+V+ATPGR+  L+ ++PD+  VF++TKFLVLDEADRVLD+ FEE+L+VIF  
Sbjct: 190 KGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGS 249

Query: 251 LPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYL 310
           LP+ RQT LFSAT++ +L +LLELS N +YF+EAYEGFKTVD LKQ Y+ +P + K++YL
Sbjct: 250 LPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYL 309

Query: 311 LHIMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKS 370
            +++SKM +  +RS I+FV TC++C +L  LL EL    V+LHS K QS RLAAL+ FKS
Sbjct: 310 FYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKS 369

Query: 371 GQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFI-TQ 430
            + PVLLATDVASRGLDI TVDLVINYD+PR +PRDY+HRVGRTARA R GL++SFI TQ
Sbjct: 370 SKVPVLLATDVASRGLDIQTVDLVINYDVPR-YPRDYIHRVGRTARATRGGLSISFITTQ 429

Query: 431 NDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQ 490
            D+ L+HEIE  +GK+L  ++ +  +V ++ TKV+KARR+A MKM D+G E+KV+ RK+Q
Sbjct: 430 RDIRLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARRLANMKMADEGHEDKVQARKEQ 489

Query: 491 KFKILAEKGLLKKRSRKRRRE 495
                      KKR+++R+R+
Sbjct: 490 -----------KKRAQERKRK 498

BLAST of CmoCh02G006580 vs. Swiss-Prot
Match: DDX49_HUMAN (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens GN=DDX49 PE=1 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.2e-107
Identity = 224/449 (49.89%), Postives = 296/449 (65.92%), Query Frame = 1

Query: 64  FADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQ 123
           FA+LGLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 124 LSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHI 183
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 184 VIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVG---FEEELKVIFKCLPRNRQ 243
           VIATPGR+   L  +        K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFS--IKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQ 183

Query: 244 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 303
           TLLFSAT+T  L  L  L+ N+ +F+EA     TV+ L Q+Y+ +P+ VKD YL+H++ +
Sbjct: 184 TLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQR 243

Query: 304 MKDMGVR-SAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 363
            +D     S IIF +TCK+C  L ++L +     VALHS   Q ER AAL +FKS    +
Sbjct: 244 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 364 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 423
           L+ATDVASRGLDIPTV +VIN++ P   P+ Y+HRVGRTARAGR G A++ +TQ D+ L+
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTP-GLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLV 363

Query: 424 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKIL- 483
           H IE  + KKLE F  +E EVL+ +T+V   RR   +K+    F+EK KE  K+K  IL 
Sbjct: 364 HAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEK-KEINKRKQLILE 423

Query: 484 --------AEKGLLKKRSRKRRREKASKE 500
                     K  L K  +K RR K   E
Sbjct: 424 GKDPDLEAKRKAELAKIKQKNRRFKEKVE 448

BLAST of CmoCh02G006580 vs. Swiss-Prot
Match: DDX49_MOUSE (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.2e-105
Identity = 215/440 (48.86%), Postives = 295/440 (67.05%), Query Frame = 1

Query: 64  FADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQ 123
           FA++GLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 124 LSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHI 183
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 184 VIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVG---FEEELKVIFKCLPRNRQ 243
           VIATPGR+   L  +        K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFN--MKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQ 183

Query: 244 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 303
           TLLFSAT+T  L+ L  L+ N+ +F+EA    +TV+ L Q+Y+ +P+ VKD YL+H++  
Sbjct: 184 TLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQT 243

Query: 304 MKD-MGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 363
            +D +   S IIF +TCK+C  L ++L + +   VALHS   Q ER AAL +FKS    +
Sbjct: 244 FQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 364 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 423
           L+ATDVASRGLDIPTV +VIN++ P   P+ Y+HRVGRTARAGR G A++ +TQ D+ L+
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTP-GLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLL 363

Query: 424 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 483
           H IE  + ++L     +E EVL+ +T+V   RR   +K+    F+EK KE  K+K  IL 
Sbjct: 364 HAIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEK-KEINKRKQMILE 423

Query: 484 EKGLLKKRSRKRRREKASKE 500
            K    +  RK    K  ++
Sbjct: 424 GKDPDLEAKRKAELAKIKQQ 439

BLAST of CmoCh02G006580 vs. Swiss-Prot
Match: DDX49_DICDI (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum GN=ddx49 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 6.3e-101
Identity = 208/442 (47.06%), Postives = 296/442 (66.97%), Query Frame = 1

Query: 60  TNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 119
           ++ TF +LGL+ W+V  CK+L  K P+ +Q + IP+IL G D++  A+TGSGKTA+FA+P
Sbjct: 2   SDKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIP 61

Query: 120 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 179
           IL QLSE P+GVFA+++TPTRELA Q+ EQF A+G+ +N+ CSVV+GG+D + Q   L K
Sbjct: 62  ILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDK 121

Query: 180 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCL--PR 239
           RPHI++ATPGR+   L     I   F   KFLVLDEADR+L   FE E+  I + L  P 
Sbjct: 122 RPHIIVATPGRLASHLNNGLKIALKF--CKFLVLDEADRLLGEDFELEIASILEHLPPPE 181

Query: 240 NRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHI 299
            RQTLLFSATMTK+L  L  ++ NK + +E    + TVD LKQ+Y+++P   KD YL++I
Sbjct: 182 KRQTLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYI 241

Query: 300 MSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQA 359
           + K +     SAI+FV+ C +   +  +L +LD   V+LHSF  Q  RLAAL  FKSG+ 
Sbjct: 242 LKKHEG---SSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKV 301

Query: 360 PVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVE 419
            VL+ATDVASRGLDIP V +VINY +     +DY+HRVGRTAR GR G A+SFIT +DV 
Sbjct: 302 KVLVATDVASRGLDIPDVQIVINYKLSN-SSKDYIHRVGRTARFGRSGRAISFITPHDVS 361

Query: 420 LIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKI 479
           LI  IE  + K+LE+++  ++EV  ++ +   AR++  + + +  F  K KER+ ++ ++
Sbjct: 362 LIKGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDEIEFGVKQKERRTERNEL 421

Query: 480 LAEKGLLKKRSRKRRREKASKE 500
             +   LK+ + K + E  + +
Sbjct: 422 QKQ---LKEVNNKEKFENNNND 434

BLAST of CmoCh02G006580 vs. TrEMBL
Match: A0A0A0KD72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G136530 PE=3 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 5.5e-237
Identity = 437/499 (87.58%), Postives = 462/499 (92.59%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEV VD NFPLFSK HRK HKPS+ NPTA      V N A K  +QIEKSTELTTKST
Sbjct: 1   MDQEVIVDRNFPLFSKPHRKKHKPSE-NPTA------VPNVAPKKSLQIEKSTELTTKST 60

Query: 61  N-VTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           N +TFADLGLSEWI+QTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDMLNQTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGR+KVLLE+NPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLH++S
Sbjct: 241 QTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLS 300

Query: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLL  LDQ+V ALHS KSQSERLAALYRFKSG+ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480
           HEIEANLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVD GFEEKVKERKKQK K LA
Sbjct: 421 HEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLA 480

Query: 481 EKGLLKKRSRKRRREKASK 499
           EKGLLKKR+++RR+EK S+
Sbjct: 481 EKGLLKKRNKRRRKEKTSE 491

BLAST of CmoCh02G006580 vs. TrEMBL
Match: D7T0V5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g00510 PE=3 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 5.9e-207
Identity = 379/498 (76.10%), Postives = 438/498 (87.95%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MD+E  VDENFPLFSK  + T KPS+ + T A       N   + P+   ++T  T+ S+
Sbjct: 1   MDEETLVDENFPLFSK-RKPTPKPSKNSTTTA------QNPNPEQPLT--RTTNPTSPSS 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
             TFADLGL+EW VQ CKEL M++PT VQ HCIP+ILAG DVLGLAQTGSGKTAAFALPI
Sbjct: 61  --TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           L +L+E PFGVFALVVTPTRELAYQLAEQFRALGS L+LRC+VVVGGMDM+NQ Q+L++R
Sbjct: 121 LHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PH+VIATPGRVKVLLE+NPDIPAVF++TKFLVLDEADRVLDVGFEEEL+V+F+CLP+NRQ
Sbjct: 181 PHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMT DL+TLLELS+NKAYFYEAYEGFKTV+ LKQQY+F+PKNVKDVYLLHI+SK
Sbjct: 241 TLLFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           M++MG+RSAIIFV TC+SCH L LLL ELD +V ALHSFKSQS RLAA++RFKSGQ P+L
Sbjct: 301 MEEMGIRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPIL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLV+NYDIPR +PRDYVHRVGRTARAGR GL++S +TQNDV+LIH
Sbjct: 361 LATDVASRGLDIPTVDLVVNYDIPR-YPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEA LGK+L+ F+CKE EVL+N+TKVYKARRVA MKM+DDGFEEK K RK QK K LAE
Sbjct: 421 EIEAVLGKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 480

Query: 481 KGLLKKRSRKRRREKASK 499
           KGLLKK++RKR+REKASK
Sbjct: 481 KGLLKKKTRKRKREKASK 486

BLAST of CmoCh02G006580 vs. TrEMBL
Match: A5B008_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021046 PE=3 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 5.9e-207
Identity = 379/498 (76.10%), Postives = 438/498 (87.95%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MD+E  VDENFPLFSK  + T KPS+ + T A       N   + P+   ++T  T+ S+
Sbjct: 104 MDEETLVDENFPLFSK-RKPTPKPSKNSTTTA------QNPNPEQPLT--RTTNPTSPSS 163

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
             TFADLGL+EW VQ CKEL M++PT VQ HCIP+ILAG DVLGLAQTGSGKTAAFALPI
Sbjct: 164 --TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPI 223

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           L +L+E PFGVFALVVTPTRELAYQLAEQFRALGS L+LRC+VVVGGMDM+NQ Q+L++R
Sbjct: 224 LHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQR 283

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PH+VIATPGRVKVLLE+NPDIPAVF++TKFLVLDEADRVLDVGFEEEL+V+F+CLP+NRQ
Sbjct: 284 PHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 343

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMT DL+TLLELS+NKAYFYEAYEGFKTV+ LKQQY+F+PKNVKDVYLLHI+SK
Sbjct: 344 TLLFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSK 403

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           M++MG+RSAIIFV TC+SCH L LLL ELD +V ALHSFKSQS RLAA++RFKSGQ P+L
Sbjct: 404 MEEMGIRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPIL 463

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLV+NYDIPR +PRDYVHRVGRTARAGR GL++S +TQNDV+LIH
Sbjct: 464 LATDVASRGLDIPTVDLVVNYDIPR-YPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIH 523

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEA LGK+L+ F+CKE EVL+N+TKVYKARRVA MKM+DDGFEEK K RK QK K LAE
Sbjct: 524 EIEAVLGKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 583

Query: 481 KGLLKKRSRKRRREKASK 499
           KGLLKK++RKR+REKASK
Sbjct: 584 KGLLKKKTRKRKREKASK 589

BLAST of CmoCh02G006580 vs. TrEMBL
Match: A0A067F2D6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011100mg PE=3 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 1.6e-204
Identity = 370/497 (74.45%), Postives = 426/497 (85.71%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTE----LT 60
           MD+++ +D NFPLF+K   KT    +  P     S     T      Q+EK T      T
Sbjct: 1   MDEQILLDRNFPLFAKPKSKTRSKPEPQPEPEPESKNAKTT------QLEKFTNPDPNST 60

Query: 61  TKSTNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAF 120
           T  + VTFA LGL+EW VQTCKEL M++PT VQTHCIPKIL G DVLGLAQTGSGKTAAF
Sbjct: 61  TTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAF 120

Query: 121 ALPILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQS 180
           ALPIL +L+E P+GV ALV+TPTRELAYQLAEQF+ALGS L+LRC VVVGGMD+L Q +S
Sbjct: 121 ALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 180

Query: 181 LLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLP 240
           L+ RPH+VIATPGR+KVLLEE+PDIP VFS+TKFLVLDEADRVLDVGFEEEL+V+F+CLP
Sbjct: 181 LMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 240

Query: 241 RNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLH 300
           +NRQTLLFSATMT DL+TLLELSANKAYFYEAYEGFKTV+ LKQQY+FIPKNVKDVYL+H
Sbjct: 241 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMH 300

Query: 301 IMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQ 360
           ++SKM+DMG+RSAIIFV TC+SCH L LLL ELDQ+ VALHSFKSQS+RL+AL+RFKSGQ
Sbjct: 301 VLSKMEDMGIRSAIIFVSTCRSCHLLSLLLEELDQEAVALHSFKSQSQRLSALHRFKSGQ 360

Query: 361 APVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDV 420
           A +LLATDVASRGLDIPTVDLV+NYDIPR +PRDYVHRVGRTARAGR GLAVSF+TQNDV
Sbjct: 361 ATILLATDVASRGLDIPTVDLVLNYDIPR-YPRDYVHRVGRTARAGRGGLAVSFVTQNDV 420

Query: 421 ELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK 480
           +LIHEIEA +GK+LE FECKE EVL ++T+VYKARRVA MK++DDGFEEK KERKKQK K
Sbjct: 421 DLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGFEEKAKERKKQKLK 480

Query: 481 ILAEKGLLKKRSRKRRR 494
           +LAEKG LKKRS KR++
Sbjct: 481 MLAEKGSLKKRSEKRKK 490

BLAST of CmoCh02G006580 vs. TrEMBL
Match: V4U8C2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004831mg PE=3 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 1.0e-203
Identity = 371/497 (74.65%), Postives = 428/497 (86.12%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTE----LT 60
           MD+++ +D NFPLF+K   KT    +  P     S      A+ A  Q+EK T      T
Sbjct: 1   MDEQILLDGNFPLFAKPKSKTRSKPEPQPEPEPES----KNAKTA--QLEKFTNPDPNST 60

Query: 61  TKSTNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAF 120
           T  + VTFA LGL+EW VQTCKEL M++PT VQTHCIPKIL G DVLGLAQTGSGKTAAF
Sbjct: 61  TTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAF 120

Query: 121 ALPILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQS 180
           ALPIL +L+E P+GV ALV+TPTRELAYQLAEQF+ALGS L+LRC VVVGGMD+L Q +S
Sbjct: 121 ALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 180

Query: 181 LLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLP 240
           L+ RPH+VIATPGR+KVLLEE+PDIP VFS+TKFLVLDEADRVLDVGFEEEL+V+F+CLP
Sbjct: 181 LMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 240

Query: 241 RNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLH 300
           +NRQTLLFSATMT DL+TLLELSANKAYFYEAYEGFKTV+ LKQQY+FIPKNVKDVYL+H
Sbjct: 241 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMH 300

Query: 301 IMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQ 360
           ++SKM+DMG+RSAIIFV TC+SCH L LLL ELDQ+ VALHSFKSQS+RL+AL+RFKSGQ
Sbjct: 301 VLSKMEDMGIRSAIIFVSTCRSCHLLSLLLEELDQEAVALHSFKSQSQRLSALHRFKSGQ 360

Query: 361 APVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDV 420
           A +LLATDVASRGLDIPTVDLV+NYDIPR +PRDYVHRVGRTARAGR GLAVSF+TQNDV
Sbjct: 361 ATILLATDVASRGLDIPTVDLVLNYDIPR-YPRDYVHRVGRTARAGRGGLAVSFVTQNDV 420

Query: 421 ELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK 480
           +LIHEIEA +GK+LE FECKE EVL ++T+VYKARRVA MK++DDGFEEK KERKKQK K
Sbjct: 421 DLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGFEEKAKERKKQKLK 480

Query: 481 ILAEKGLLKKRSRKRRR 494
           +LAEKG LKKRS KR++
Sbjct: 481 MLAEKGSLKKRSEKRKK 490

BLAST of CmoCh02G006580 vs. TAIR10
Match: AT1G16280.1 (AT1G16280.1 RNA helicase 36)

HSP 1 Score: 606.3 bits (1562), Expect = 1.7e-173
Identity = 318/473 (67.23%), Postives = 386/473 (81.61%), Query Frame = 1

Query: 25  SQKNPTAAAVSAAVDNTAEKAPIQIEKSTEL-----TTKSTNVTFADLGLSEWIVQTCKE 84
           S+KNP       +    +++   Q EK T       TT +TN  F  LGL+EW V+TCKE
Sbjct: 18  SRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATN--FEGLGLAEWAVETCKE 77

Query: 85  LAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPT 144
           L M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFALPIL +L+E P+GVFALVVTPT
Sbjct: 78  LGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPT 137

Query: 145 RELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENP 204
           RELA+QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLLE NP
Sbjct: 138 RELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNP 197

Query: 205 DIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELS 264
           D+P VFS+TKFLVLDEADRVLDVGF++EL+ IF+CLP++RQTLLFSATMT +L+ LLE S
Sbjct: 198 DVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHS 257

Query: 265 ANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGVRSAIIFVHTCKSC 324
           +NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI+S+M+D G+RSA+IFV TC++C
Sbjct: 258 SNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTC 317

Query: 325 HHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVLLATDVASRGLDIPTVDLVI 384
             L L+L EL+ + +A+HS  SQS RL+AL +FKSG+ P+LLATDVASRGLDIPTVDLVI
Sbjct: 318 QRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVI 377

Query: 385 NYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENE 444
           NYDIPR  PRDYVHRVGRTARAGR GLAVS IT+ DV+LIH+IE  +GKK+E +  K   
Sbjct: 378 NYDIPR-DPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVIT 437

Query: 445 VLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAEKGLLKKRSRKRR 493
               VTKV KA+RVA MKM+D+GFE+KVK+R+K K K LA+KGLLKKR ++++
Sbjct: 438 DSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

BLAST of CmoCh02G006580 vs. TAIR10
Match: AT5G60990.1 (AT5G60990.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 337.0 bits (863), Expect = 1.9e-92
Identity = 199/450 (44.22%), Postives = 282/450 (62.67%), Query Frame = 1

Query: 63  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 122
           TFA+LG+ E +V+ C+ L  K P+ +Q   +P  L G DV+GLAQTGSGKT AFA+PILQ
Sbjct: 10  TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69

Query: 123 QLSETPF------------GVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDM 182
            L E  +              FA V++PTRELA Q+AEQF ALG+ ++LRC+V+VGG+D 
Sbjct: 70  ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129

Query: 183 LNQTQSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKT-KFLVLDEADRVLDVGFEEELK 242
           + QT +L KRPH+++ATPGR   L +   D      K+ K+LVLDEADR+L+  FE+ L 
Sbjct: 130 MQQTIALGKRPHVIVATPGR---LWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLN 189

Query: 243 VIFKCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNV 302
            I + +P  R+T LFSATMTK +  L           EA   + TVD LKQQY F+    
Sbjct: 190 QILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKY 249

Query: 303 KDVYLLHIMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAAL 362
           KD YL++I+S+M +    +++IF  TC     L L+L  L    + +    +QS+RL AL
Sbjct: 250 KDCYLVYILSEMPE---STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGAL 309

Query: 363 YRFKSGQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVS 422
            +FK+G+  +L+ TDVASRGLDIP+VD+VINYDIP    +DY+HRVGRTARAGR G+ +S
Sbjct: 310 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT-NSKDYIHRVGRTARAGRSGVGIS 369

Query: 423 FITQNDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKE 482
            + Q ++E   +IE  +GKKL  +  +E+EVL  + +V +A++++AM M + G  ++  E
Sbjct: 370 LVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRRGE 429

Query: 483 RKKQKFKILAEKGLLKKRSRKRRREKASKE 500
             ++  + L   G  K R  K R     K+
Sbjct: 430 DDEESERFL---GGNKDRGNKERGGNKDKK 449

BLAST of CmoCh02G006580 vs. TAIR10
Match: AT4G16630.1 (AT4G16630.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 248.4 bits (633), Expect = 9.1e-66
Identity = 152/383 (39.69%), Postives = 216/383 (56.40%), Query Frame = 1

Query: 63  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 122
           TF +L LS  +++ C+ L  KKPT +Q  CIP  L G D+   A TGSGKTAAFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 123 QLSETPFGVFA---LVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 182
           +L   P  VFA   L++TPTRELA Q+    + L    +++C ++VGG+ +  Q   L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 183 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 242
            P IV+ATPGR+   L  +  +         L+LDEADR+L  GF  E+  + +  P+ R
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVD--LDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 347

Query: 243 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 302
           QT+LFSATMT++++ L++LS NK     A    +    L ++ V I +  +      ++S
Sbjct: 348 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 407

Query: 303 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 362
                     IIF  T ++ H L +L G        LH   +Q++RL +L  F+  +   
Sbjct: 408 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 467

Query: 363 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 422
           L+ATDVA+RGLDI  V  VINY  PR     YVHRVGRTARAGR G AV+F+T +D  L+
Sbjct: 468 LIATDVAARGLDIIGVQTVINYACPREID-SYVHRVGRTARAGREGYAVTFVTDSDRSLL 527

Query: 423 HEIEANLGKKLEIFECKENEVLE 443
             I   +G KL+     E  +++
Sbjct: 528 KVIAKKVGSKLKSRVIPEQSIVK 547

BLAST of CmoCh02G006580 vs. TAIR10
Match: AT5G65900.1 (AT5G65900.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 223.0 bits (567), Expect = 4.1e-58
Identity = 150/430 (34.88%), Postives = 226/430 (52.56%), Query Frame = 1

Query: 2   DQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKSTN 61
           + EV  +E  P      +K  K  +K+  A +    V++  E      EK  E T+  TN
Sbjct: 106 EDEVIAEEEEP------KKKKKKQRKDTEAKSEEEEVEDKEE------EKKLEETSIMTN 165

Query: 62  VTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPIL 121
            TF  L LS+   ++ KE+   + T +Q   IP ++ G DVLG A+TGSGKT AF +P +
Sbjct: 166 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 225

Query: 122 QQLSETPF----GVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSL 181
           + L    F    G   LV+ PTRELA Q     + L    +     V+GG     + + L
Sbjct: 226 ELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEIL 285

Query: 182 LKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPR 241
            K  ++++ATPGR+   LE       +F   KFLV+DEADR+L+  FEE+LK I   LP+
Sbjct: 286 AKGVNLLVATPGRLLDHLENTNGF--IFKNLKFLVMDEADRILEQNFEEDLKKILNLLPK 345

Query: 242 NRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV--DMLKQQYVFIPKNVKDVYLL 301
            RQT LFSAT +  +E L  +S     + +  EG K V  + L+Q Y  +P  ++ ++LL
Sbjct: 346 TRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLL 405

Query: 302 HIMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSG 361
             + + +  G +  ++F  TCKS      L   +  D + +     Q++R     +F   
Sbjct: 406 TFLKRFQ--GKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKA 465

Query: 362 QAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARA-GRHGLAVSFITQN 421
           +  +LL T+VA+RGLD P VD ++ YD P   P DY+HRVGRTAR  G  G A+  +T  
Sbjct: 466 ETGILLCTNVAARGLDFPHVDWIVQYDPPD-NPTDYIHRVGRTARGEGAKGKALLVLTPQ 518

Query: 422 DVELIHEIEA 425
           +++ I  ++A
Sbjct: 526 ELKFIQYLKA 518

BLAST of CmoCh02G006580 vs. TAIR10
Match: AT3G58570.1 (AT3G58570.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-56
Identity = 145/393 (36.90%), Postives = 214/393 (54.45%), Query Frame = 1

Query: 47  IQIEKSTELTTKSTNVTFADLGLSEWI---VQTCKELAMKKPTAVQTHCIPKILAGLDVL 106
           I IE S +      N TFA++ L E +   +Q CK +   KPT VQ + IP + AG D++
Sbjct: 132 IPIETSGDNVPPPVN-TFAEIDLGEALNLNIQRCKYV---KPTPVQRNAIPILAAGRDLM 191

Query: 107 GLAQTGSGKTAAFALPILQ-----QLSETPFGV-----FALVVTPTRELAYQLAEQFRAL 166
             AQTGSGKTAAF  PI+      Q  E P GV      A++++PTRELA Q+ ++ R  
Sbjct: 192 ACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKF 251

Query: 167 GSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVL 226
                ++  V  GG  +  Q + L +   I++ATPGR+  LLE            +FL L
Sbjct: 252 SYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGR---VSLQMVRFLAL 311

Query: 227 DEADRVLDVGFEEELKVIFKCL----PRNRQTLLFSATMTKDLETLLELSANKAYFYEAY 286
           DEADR+LD+GFE +++ I + +    P  RQT+LFSAT  ++++ L     +   F    
Sbjct: 312 DEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVG 371

Query: 287 EGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGVRS----AIIFVHTCKSCHHLGLL 346
               + D++ Q+  F+  + K  +L+ ++   ++ G +      ++FV T K    L   
Sbjct: 372 RVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENW 431

Query: 347 LGELDQDVVALHSFKSQSERLAALYRFKSGQAPVLLATDVASRGLDIPTVDLVINYDIPR 406
           L         +H  +SQ ER  AL  FK+G+ P+L+ATDVA+RGLDIP V  V+N+D+P 
Sbjct: 432 LCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPN 491

Query: 407 WFPRDYVHRVGRTARAGRHGLAVSFITQNDVEL 419
               DYVHR+GRT RAG  GLA +F   N+  +
Sbjct: 492 DID-DYVHRIGRTGRAGNSGLATAFFNDNNTTM 516

BLAST of CmoCh02G006580 vs. NCBI nr
Match: gi|659112684|ref|XP_008456302.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo])

HSP 1 Score: 842.4 bits (2175), Expect = 4.0e-241
Identity = 445/496 (89.72%), Postives = 466/496 (93.95%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEV VD NFPLFSK HRK HKPS+ NPTAA     V+N A K+ +QIEKSTELTTKST
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSE-NPTAA-----VENIAPKSSLQIEKSTELTTKST 60

Query: 61  N-VTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           N VTF+DLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300

Query: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLL  LDQ+V ALHSFKSQSERLAALYRFKSGQ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480
           HEIEANLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVDDGFEEKVKERKKQK K LA
Sbjct: 421 HEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLA 480

Query: 481 EKGLLKKRSRKRRREK 496
           EKGLLKKR+++RR+EK
Sbjct: 481 EKGLLKKRNKRRRKEK 489

BLAST of CmoCh02G006580 vs. NCBI nr
Match: gi|449444278|ref|XP_004139902.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis sativus])

HSP 1 Score: 828.2 bits (2138), Expect = 7.9e-237
Identity = 437/499 (87.58%), Postives = 462/499 (92.59%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEV VD NFPLFSK HRK HKPS+ NPTA      V N A K  +QIEKSTELTTKST
Sbjct: 1   MDQEVIVDRNFPLFSKPHRKKHKPSE-NPTA------VPNVAPKKSLQIEKSTELTTKST 60

Query: 61  N-VTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           N +TFADLGLSEWI+QTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDMLNQTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGR+KVLLE+NPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLH++S
Sbjct: 241 QTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLS 300

Query: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLL  LDQ+V ALHS KSQSERLAALYRFKSG+ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480
           HEIEANLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVD GFEEKVKERKKQK K LA
Sbjct: 421 HEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLA 480

Query: 481 EKGLLKKRSRKRRREKASK 499
           EKGLLKKR+++RR+EK S+
Sbjct: 481 EKGLLKKRNKRRRKEKTSE 491

BLAST of CmoCh02G006580 vs. NCBI nr
Match: gi|147772471|emb|CAN65105.1| (hypothetical protein VITISV_021046 [Vitis vinifera])

HSP 1 Score: 728.4 bits (1879), Expect = 8.5e-207
Identity = 379/498 (76.10%), Postives = 438/498 (87.95%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MD+E  VDENFPLFSK  + T KPS+ + T A       N   + P+   ++T  T+ S+
Sbjct: 104 MDEETLVDENFPLFSK-RKPTPKPSKNSTTTA------QNPNPEQPLT--RTTNPTSPSS 163

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
             TFADLGL+EW VQ CKEL M++PT VQ HCIP+ILAG DVLGLAQTGSGKTAAFALPI
Sbjct: 164 --TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPI 223

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           L +L+E PFGVFALVVTPTRELAYQLAEQFRALGS L+LRC+VVVGGMDM+NQ Q+L++R
Sbjct: 224 LHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQR 283

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PH+VIATPGRVKVLLE+NPDIPAVF++TKFLVLDEADRVLDVGFEEEL+V+F+CLP+NRQ
Sbjct: 284 PHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 343

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMT DL+TLLELS+NKAYFYEAYEGFKTV+ LKQQY+F+PKNVKDVYLLHI+SK
Sbjct: 344 TLLFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSK 403

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           M++MG+RSAIIFV TC+SCH L LLL ELD +V ALHSFKSQS RLAA++RFKSGQ P+L
Sbjct: 404 MEEMGIRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPIL 463

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLV+NYDIPR +PRDYVHRVGRTARAGR GL++S +TQNDV+LIH
Sbjct: 464 LATDVASRGLDIPTVDLVVNYDIPR-YPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIH 523

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEA LGK+L+ F+CKE EVL+N+TKVYKARRVA MKM+DDGFEEK K RK QK K LAE
Sbjct: 524 EIEAVLGKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 583

Query: 481 KGLLKKRSRKRRREKASK 499
           KGLLKK++RKR+REKASK
Sbjct: 584 KGLLKKKTRKRKREKASK 589

BLAST of CmoCh02G006580 vs. NCBI nr
Match: gi|359494643|ref|XP_002263207.2| (PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Vitis vinifera])

HSP 1 Score: 728.4 bits (1879), Expect = 8.5e-207
Identity = 379/498 (76.10%), Postives = 438/498 (87.95%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MD+E  VDENFPLFSK  + T KPS+ + T A       N   + P+   ++T  T+ S+
Sbjct: 1   MDEETLVDENFPLFSK-RKPTPKPSKNSTTTA------QNPNPEQPLT--RTTNPTSPSS 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
             TFADLGL+EW VQ CKEL M++PT VQ HCIP+ILAG DVLGLAQTGSGKTAAFALPI
Sbjct: 61  --TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           L +L+E PFGVFALVVTPTRELAYQLAEQFRALGS L+LRC+VVVGGMDM+NQ Q+L++R
Sbjct: 121 LHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PH+VIATPGRVKVLLE+NPDIPAVF++TKFLVLDEADRVLDVGFEEEL+V+F+CLP+NRQ
Sbjct: 181 PHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMT DL+TLLELS+NKAYFYEAYEGFKTV+ LKQQY+F+PKNVKDVYLLHI+SK
Sbjct: 241 TLLFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           M++MG+RSAIIFV TC+SCH L LLL ELD +V ALHSFKSQS RLAA++RFKSGQ P+L
Sbjct: 301 MEEMGIRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPIL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLV+NYDIPR +PRDYVHRVGRTARAGR GL++S +TQNDV+LIH
Sbjct: 361 LATDVASRGLDIPTVDLVVNYDIPR-YPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEA LGK+L+ F+CKE EVL+N+TKVYKARRVA MKM+DDGFEEK K RK QK K LAE
Sbjct: 421 EIEAVLGKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 480

Query: 481 KGLLKKRSRKRRREKASK 499
           KGLLKK++RKR+REKASK
Sbjct: 481 KGLLKKKTRKRKREKASK 486

BLAST of CmoCh02G006580 vs. NCBI nr
Match: gi|641842650|gb|KDO61554.1| (hypothetical protein CISIN_1g011100mg [Citrus sinensis])

HSP 1 Score: 720.3 bits (1858), Expect = 2.3e-204
Identity = 370/497 (74.45%), Postives = 426/497 (85.71%), Query Frame = 1

Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTE----LT 60
           MD+++ +D NFPLF+K   KT    +  P     S     T      Q+EK T      T
Sbjct: 1   MDEQILLDRNFPLFAKPKSKTRSKPEPQPEPEPESKNAKTT------QLEKFTNPDPNST 60

Query: 61  TKSTNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAF 120
           T  + VTFA LGL+EW VQTCKEL M++PT VQTHCIPKIL G DVLGLAQTGSGKTAAF
Sbjct: 61  TTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAF 120

Query: 121 ALPILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQS 180
           ALPIL +L+E P+GV ALV+TPTRELAYQLAEQF+ALGS L+LRC VVVGGMD+L Q +S
Sbjct: 121 ALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLLTQAKS 180

Query: 181 LLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLP 240
           L+ RPH+VIATPGR+KVLLEE+PDIP VFS+TKFLVLDEADRVLDVGFEEEL+V+F+CLP
Sbjct: 181 LMNRPHVVIATPGRIKVLLEEDPDIPPVFSRTKFLVLDEADRVLDVGFEEELRVVFQCLP 240

Query: 241 RNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLH 300
           +NRQTLLFSATMT DL+TLLELSANKAYFYEAYEGFKTV+ LKQQY+FIPKNVKDVYL+H
Sbjct: 241 KNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEGFKTVETLKQQYIFIPKNVKDVYLMH 300

Query: 301 IMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQ 360
           ++SKM+DMG+RSAIIFV TC+SCH L LLL ELDQ+ VALHSFKSQS+RL+AL+RFKSGQ
Sbjct: 301 VLSKMEDMGIRSAIIFVSTCRSCHLLSLLLEELDQEAVALHSFKSQSQRLSALHRFKSGQ 360

Query: 361 APVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDV 420
           A +LLATDVASRGLDIPTVDLV+NYDIPR +PRDYVHRVGRTARAGR GLAVSF+TQNDV
Sbjct: 361 ATILLATDVASRGLDIPTVDLVLNYDIPR-YPRDYVHRVGRTARAGRGGLAVSFVTQNDV 420

Query: 421 ELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK 480
           +LIHEIEA +GK+LE FECKE EVL ++T+VYKARRVA MK++DDGFEEK KERKKQK K
Sbjct: 421 DLIHEIEAVVGKQLEEFECKEQEVLSDITRVYKARRVATMKLMDDGFEEKAKERKKQKLK 480

Query: 481 ILAEKGLLKKRSRKRRR 494
           +LAEKG LKKRS KR++
Sbjct: 481 MLAEKGSLKKRSEKRKK 490

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RH36_ARATH3.1e-17267.23DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana GN=RH36 PE=2 SV=1[more]
RH36_ORYSJ8.7e-14354.09DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica GN=Os07g0... [more]
DDX49_HUMAN1.2e-10749.89Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens GN=DDX49 PE=1 SV=1[more]
DDX49_MOUSE3.2e-10548.86Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49 PE=2 SV=1[more]
DDX49_DICDI6.3e-10147.06Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum GN=ddx49 P... [more]
Match NameE-valueIdentityDescription
A0A0A0KD72_CUCSA5.5e-23787.58Uncharacterized protein OS=Cucumis sativus GN=Csa_6G136530 PE=3 SV=1[more]
D7T0V5_VITVI5.9e-20776.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g00510 PE=3 SV=... [more]
A5B008_VITVI5.9e-20776.10Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021046 PE=3 SV=1[more]
A0A067F2D6_CITSI1.6e-20474.45Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011100mg PE=3 SV=1[more]
V4U8C2_9ROSI1.0e-20374.65Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004831mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G16280.11.7e-17367.23 RNA helicase 36[more]
AT5G60990.11.9e-9244.22 DEA(D/H)-box RNA helicase family protein[more]
AT4G16630.19.1e-6639.69 DEA(D/H)-box RNA helicase family protein[more]
AT5G65900.14.1e-5834.88 DEA(D/H)-box RNA helicase family protein[more]
AT3G58570.11.3e-5636.90 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
Match NameE-valueIdentityDescription
gi|659112684|ref|XP_008456302.1|4.0e-24189.72PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo][more]
gi|449444278|ref|XP_004139902.1|7.9e-23787.58PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis sativus][more]
gi|147772471|emb|CAN65105.1|8.5e-20776.10hypothetical protein VITISV_021046 [Vitis vinifera][more]
gi|359494643|ref|XP_002263207.2|8.5e-20776.10PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Vitis vinifera][more]
gi|641842650|gb|KDO61554.1|2.3e-20474.45hypothetical protein CISIN_1g011100mg [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000629RNA-helicase_DEAD-box_CS
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009561 megagametogenesis
biological_process GO:0009791 post-embryonic development
biological_process GO:0006606 protein import into nucleus
biological_process GO:0006364 rRNA processing
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0090406 pollen tube
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G006580.1CmoCh02G006580.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 212..220
scor
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 307..402
score: 2.7
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 320..402
score: 6.0
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 300..441
score: 22
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 86..255
score: 1.9
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 81..281
score: 6.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 93..266
score: 31
IPR014014RNA helicase, DEAD-box type, Q motifPROFILEPS51195Q_MOTIFcoord: 62..90
score: 10
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 53..264
score: 1.9E-72coord: 273..440
score: 3.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 130..422
score: 2.1
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 2..499
score: 5.5E
NoneNo IPR availablePANTHERPTHR24031:SF302DEAD-BOX ATP-DEPENDENT RNA HELICASE 36coord: 2..499
score: 5.5E