CmoCh02G006330 (gene) Cucurbita moschata (Rifu)

NameCmoCh02G006330
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCation/hydrogen exchanger, putative
LocationCmo_Chr02 : 3939275 .. 3939571 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGAATTCCTCAATCTTCAATAGCACAGAGGATAAAATCGTCTGCTATGCGCCAAGAATGATCACAACAAATGGGGTGTGGCAAGGCGACAACCCTTTGGAGTATTCTCTCCCTCTCTTCATCCTGCAGTTAACAATGGTGGTTATGATGACTCGCGCTTTGGTTTTCCTCTTAAAACCCTTTCGTCAACCTCGAGTCATCTCTGAAATTTTGGTGAGTTCAAGATTTTGTTTTCTTTTTCTGGGTTTTTTCTTGCAGCTAAATTGTTGGCATTTGAAGCTTTACACTTGA

mRNA sequence

ATGGATGAGAATTCCTCAATCTTCAATAGCACAGAGGATAAAATCGTCTGCTATGCGCCAAGAATGATCACAACAAATGGGGTGTGGCAAGGCGACAACCCTTTGGAGTATTCTCTCCCTCTCTTCATCCTGCAGTTAACAATGGTGGTTATGATGACTCGCGCTTTGGTTTTCCTCTTAAAACCCTTTCGTCAACCTCGAGTCATCTCTGAAATTTTGCTAAATTGTTGGCATTTGAAGCTTTACACTTGA

Coding sequence (CDS)

ATGGATGAGAATTCCTCAATCTTCAATAGCACAGAGGATAAAATCGTCTGCTATGCGCCAAGAATGATCACAACAAATGGGGTGTGGCAAGGCGACAACCCTTTGGAGTATTCTCTCCCTCTCTTCATCCTGCAGTTAACAATGGTGGTTATGATGACTCGCGCTTTGGTTTTCCTCTTAAAACCCTTTCGTCAACCTCGAGTCATCTCTGAAATTTTGCTAAATTGTTGGCATTTGAAGCTTTACACTTGA
BLAST of CmoCh02G006330 vs. Swiss-Prot
Match: CHX15_ARATH (Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.5e-23
Identity = 50/64 (78.12%), Postives = 59/64 (92.19%), Query Frame = 1

Query: 10 STEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVI 69
          ST+  I+CYAP MITTNGVWQGDNPL++SLPLF+LQLT+VV++TR  VF+LKPFRQPRVI
Sbjct: 8  STDASIICYAPSMITTNGVWQGDNPLDFSLPLFVLQLTLVVVVTRFFVFILKPFRQPRVI 67

Query: 70 SEIL 74
          SEIL
Sbjct: 68 SEIL 71

BLAST of CmoCh02G006330 vs. Swiss-Prot
Match: CHX18_ARATH (Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-13
Identity = 35/65 (53.85%), Postives = 52/65 (80.00%), Query Frame = 1

Query: 9  NSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRV 68
          NST+    C AP   T+NGV+QGDNP++++LPL ILQ+ +V+++TR L +LL+P RQPRV
Sbjct: 4  NSTK---ACPAPMKATSNGVFQGDNPIDFALPLAILQIVIVIVLTRVLAYLLRPLRQPRV 63

Query: 69 ISEIL 74
          I+E++
Sbjct: 64 IAEVI 65

BLAST of CmoCh02G006330 vs. Swiss-Prot
Match: CHX17_ARATH (Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.0e-13
Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 1

Query: 17 CYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVISEIL 74
          C  P   T+NGV+QG+NPLE++LPL ILQ+ +V+++TR L FLL+P RQPRVI+EI+
Sbjct: 8  CPGPMKATSNGVFQGENPLEHALPLLILQICIVLLLTRLLAFLLRPLRQPRVIAEIV 64

BLAST of CmoCh02G006330 vs. Swiss-Prot
Match: CHX19_ARATH (Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-10
Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 1

Query: 17 CYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVISEIL 74
          C  P   T+NG +Q ++PL+++LPL ILQ+ +VV+ TR L + LKP +QPRVI+EI+
Sbjct: 10 CPGPMKATSNGAFQNESPLDFALPLIILQIVLVVVFTRLLAYFLKPLKQPRVIAEII 66

BLAST of CmoCh02G006330 vs. Swiss-Prot
Match: CHX16_ARATH (Cation/H(+) antiporter 16 OS=Arabidopsis thaliana GN=CHX16 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.5e-10
Identity = 28/50 (56.00%), Postives = 43/50 (86.00%), Query Frame = 1

Query: 24 TTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVISEIL 74
          T+NGV+ G++PL+++ PL ILQ+ +VV +TR+L FLL+P RQPRV++EI+
Sbjct: 24 TSNGVFDGESPLDFAFPLVILQICLVVAVTRSLAFLLRPMRQPRVVAEII 73

BLAST of CmoCh02G006330 vs. TrEMBL
Match: A0A0A0LQ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302270 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-26
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLL 60
          MD  +SI N T+D IVCYAP MITTNGVWQGDNPL+YSLPLFILQLTMVV+MTR LVFLL
Sbjct: 1  MDGQASISNGTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVVMTRILVFLL 60

Query: 61 KPFRQPRVISEIL 74
          KPFRQPRVISEIL
Sbjct: 61 KPFRQPRVISEIL 73

BLAST of CmoCh02G006330 vs. TrEMBL
Match: A0A067KTC5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03679 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.5e-24
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1

Query: 1  MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLL 60
          M +     N+TED IVCYAP MITTNGVWQGDNPL+YSLPLFILQLT+VV+ TR LVFLL
Sbjct: 1  MGDKKPTSNTTEDAIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTLVVVTTRVLVFLL 60

Query: 61 KPFRQPRVISEIL 74
          KPFRQPRVISEI+
Sbjct: 61 KPFRQPRVISEIM 73

BLAST of CmoCh02G006330 vs. TrEMBL
Match: W9QLT0_9ROSA (Cation/H(+) antiporter 15 OS=Morus notabilis GN=L484_020693 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-23
Identity = 56/65 (86.15%), Postives = 60/65 (92.31%), Query Frame = 1

Query: 9  NSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRV 68
          N TED IVCYAP MITTNGVWQGDNPL+YSLPLFILQLTMVV+ TR LVF+LKPFRQPRV
Sbjct: 10 NKTEDTIVCYAPNMITTNGVWQGDNPLDYSLPLFILQLTMVVVTTRFLVFILKPFRQPRV 69

Query: 69 ISEIL 74
          I+EIL
Sbjct: 70 IAEIL 74

BLAST of CmoCh02G006330 vs. TrEMBL
Match: A0A061DJ40_THECC (Cation/hydrogen exchanger 15 OS=Theobroma cacao GN=TCM_001511 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.3e-23
Identity = 55/73 (75.34%), Postives = 63/73 (86.30%), Query Frame = 1

Query: 1  MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLL 60
          MD   ++ N +ED IVCYAP MITTNGVWQGDNPL+YSLPLFILQLT+VV+ TR LVF+L
Sbjct: 1  MDSVDTVANKSEDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTLVVVSTRILVFIL 60

Query: 61 KPFRQPRVISEIL 74
          KP RQPRVI+EIL
Sbjct: 61 KPLRQPRVIAEIL 73

BLAST of CmoCh02G006330 vs. TrEMBL
Match: A0A068UNU9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030436001 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.0e-23
Identity = 54/72 (75.00%), Postives = 65/72 (90.28%), Query Frame = 1

Query: 2  DENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLK 61
          DE ++  NST++ IVCYAP MITTNG+WQGDNPL+YSLPLFILQLT+VV++TR LV++LK
Sbjct: 3  DEAATTANSTDETIVCYAPTMITTNGIWQGDNPLDYSLPLFILQLTLVVVVTRILVYILK 62

Query: 62 PFRQPRVISEIL 74
          P RQPRVISEIL
Sbjct: 63 PLRQPRVISEIL 74

BLAST of CmoCh02G006330 vs. TAIR10
Match: AT2G13620.1 (AT2G13620.1 cation/hydrogen exchanger 15)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-24
Identity = 50/64 (78.12%), Postives = 59/64 (92.19%), Query Frame = 1

Query: 10 STEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVI 69
          ST+  I+CYAP MITTNGVWQGDNPL++SLPLF+LQLT+VV++TR  VF+LKPFRQPRVI
Sbjct: 8  STDASIICYAPSMITTNGVWQGDNPLDFSLPLFVLQLTLVVVVTRFFVFILKPFRQPRVI 67

Query: 70 SEIL 74
          SEIL
Sbjct: 68 SEIL 71

BLAST of CmoCh02G006330 vs. TAIR10
Match: AT5G41610.1 (AT5G41610.1 cation/H+ exchanger 18)

HSP 1 Score: 76.6 bits (187), Expect = 7.8e-15
Identity = 35/65 (53.85%), Postives = 52/65 (80.00%), Query Frame = 1

Query: 9  NSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRV 68
          NST+    C AP   T+NGV+QGDNP++++LPL ILQ+ +V+++TR L +LL+P RQPRV
Sbjct: 4  NSTK---ACPAPMKATSNGVFQGDNPIDFALPLAILQIVIVIVLTRVLAYLLRPLRQPRV 63

Query: 69 ISEIL 74
          I+E++
Sbjct: 64 IAEVI 65

BLAST of CmoCh02G006330 vs. TAIR10
Match: AT4G23700.1 (AT4G23700.1 cation/H+ exchanger 17)

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-14
Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 1

Query: 17 CYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVISEIL 74
          C  P   T+NGV+QG+NPLE++LPL ILQ+ +V+++TR L FLL+P RQPRVI+EI+
Sbjct: 8  CPGPMKATSNGVFQGENPLEHALPLLILQICIVLLLTRLLAFLLRPLRQPRVIAEIV 64

BLAST of CmoCh02G006330 vs. TAIR10
Match: AT3G17630.1 (AT3G17630.1 cation/H+ exchanger 19)

HSP 1 Score: 67.0 bits (162), Expect = 6.2e-12
Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 1

Query: 17 CYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVISEIL 74
          C  P   T+NG +Q ++PL+++LPL ILQ+ +VV+ TR L + LKP +QPRVI+EI+
Sbjct: 10 CPGPMKATSNGAFQNESPLDFALPLIILQIVLVVVFTRLLAYFLKPLKQPRVIAEII 66

BLAST of CmoCh02G006330 vs. TAIR10
Match: AT1G64170.1 (AT1G64170.1 cation/H+ exchanger 16)

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-11
Identity = 28/50 (56.00%), Postives = 43/50 (86.00%), Query Frame = 1

Query: 24 TTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVISEIL 74
          T+NGV+ G++PL+++ PL ILQ+ +VV +TR+L FLL+P RQPRV++EI+
Sbjct: 24 TSNGVFDGESPLDFAFPLVILQICLVVAVTRSLAFLLRPMRQPRVVAEII 73

BLAST of CmoCh02G006330 vs. NCBI nr
Match: gi|449459268|ref|XP_004147368.1| (PREDICTED: cation/H(+) antiporter 15 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-26
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLL 60
          MD  +SI N T+D IVCYAP MITTNGVWQGDNPL+YSLPLFILQLTMVV+MTR LVFLL
Sbjct: 1  MDGQASISNGTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVVMTRILVFLL 60

Query: 61 KPFRQPRVISEIL 74
          KPFRQPRVISEIL
Sbjct: 61 KPFRQPRVISEIL 73

BLAST of CmoCh02G006330 vs. NCBI nr
Match: gi|659122215|ref|XP_008461025.1| (PREDICTED: cation/H(+) antiporter 15 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-26
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 1  MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLL 60
          MD  +SI N T+D IVCYAP MITTNGVWQGDNPL+YSLPLFILQLTMVV+MTR LVFLL
Sbjct: 1  MDGQASISNGTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVVMTRILVFLL 60

Query: 61 KPFRQPRVISEIL 74
          KPFRQPRVISEIL
Sbjct: 61 KPFRQPRVISEIL 73

BLAST of CmoCh02G006330 vs. NCBI nr
Match: gi|802585724|ref|XP_012070586.1| (PREDICTED: cation/H(+) antiporter 15 [Jatropha curcas])

HSP 1 Score: 118.6 bits (296), Expect = 5.1e-24
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1

Query: 1  MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLL 60
          M +     N+TED IVCYAP MITTNGVWQGDNPL+YSLPLFILQLT+VV+ TR LVFLL
Sbjct: 1  MGDKKPTSNTTEDAIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTLVVVTTRVLVFLL 60

Query: 61 KPFRQPRVISEIL 74
          KPFRQPRVISEI+
Sbjct: 61 KPFRQPRVISEIM 73

BLAST of CmoCh02G006330 vs. NCBI nr
Match: gi|703078256|ref|XP_010090834.1| (Cation/H(+) antiporter 15 [Morus notabilis])

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-23
Identity = 56/65 (86.15%), Postives = 60/65 (92.31%), Query Frame = 1

Query: 9  NSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRV 68
          N TED IVCYAP MITTNGVWQGDNPL+YSLPLFILQLTMVV+ TR LVF+LKPFRQPRV
Sbjct: 10 NKTEDTIVCYAPNMITTNGVWQGDNPLDYSLPLFILQLTMVVVTTRFLVFILKPFRQPRV 69

Query: 69 ISEIL 74
          I+EIL
Sbjct: 70 IAEIL 74

BLAST of CmoCh02G006330 vs. NCBI nr
Match: gi|590708940|ref|XP_007048418.1| (Cation/hydrogen exchanger 15 [Theobroma cacao])

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-23
Identity = 55/73 (75.34%), Postives = 63/73 (86.30%), Query Frame = 1

Query: 1  MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLL 60
          MD   ++ N +ED IVCYAP MITTNGVWQGDNPL+YSLPLFILQLT+VV+ TR LVF+L
Sbjct: 1  MDSVDTVANKSEDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTLVVVSTRILVFIL 60

Query: 61 KPFRQPRVISEIL 74
          KP RQPRVI+EIL
Sbjct: 61 KPLRQPRVIAEIL 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CHX15_ARATH2.5e-2378.13Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1[more]
CHX18_ARATH1.4e-1353.85Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1[more]
CHX17_ARATH4.0e-1359.65Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1[more]
CHX19_ARATH1.1e-1050.88Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1[more]
CHX16_ARATH5.5e-1056.00Cation/H(+) antiporter 16 OS=Arabidopsis thaliana GN=CHX16 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LQ92_CUCSA1.7e-2684.93Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302270 PE=4 SV=1[more]
A0A067KTC5_JATCU3.5e-2478.08Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03679 PE=4 SV=1[more]
W9QLT0_9ROSA1.3e-2386.15Cation/H(+) antiporter 15 OS=Morus notabilis GN=L484_020693 PE=4 SV=1[more]
A0A061DJ40_THECC2.3e-2375.34Cation/hydrogen exchanger 15 OS=Theobroma cacao GN=TCM_001511 PE=4 SV=1[more]
A0A068UNU9_COFCA3.0e-2375.00Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030436001 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G13620.11.4e-2478.13 cation/hydrogen exchanger 15[more]
AT5G41610.17.8e-1553.85 cation/H+ exchanger 18[more]
AT4G23700.12.3e-1459.65 cation/H+ exchanger 17[more]
AT3G17630.16.2e-1250.88 cation/H+ exchanger 19[more]
AT1G64170.13.1e-1156.00 cation/H+ exchanger 16[more]
Match NameE-valueIdentityDescription
gi|449459268|ref|XP_004147368.1|2.4e-2684.93PREDICTED: cation/H(+) antiporter 15 [Cucumis sativus][more]
gi|659122215|ref|XP_008461025.1|2.4e-2684.93PREDICTED: cation/H(+) antiporter 15 [Cucumis melo][more]
gi|802585724|ref|XP_012070586.1|5.1e-2478.08PREDICTED: cation/H(+) antiporter 15 [Jatropha curcas][more]
gi|703078256|ref|XP_010090834.1|1.9e-2386.15Cation/H(+) antiporter 15 [Morus notabilis][more]
gi|590708940|ref|XP_007048418.1|3.3e-2375.34Cation/hydrogen exchanger 15 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0006813 potassium ion transport
biological_process GO:0006885 regulation of pH
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005451 monovalent cation:proton antiporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G006330.1CmoCh02G006330.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32468FAMILY NOT NAMEDcoord: 10..73
score: 5.7
NoneNo IPR availablePANTHERPTHR32468:SF26CATION/H(+) ANTIPORTER 15coord: 10..73
score: 5.7

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None