CmoCh02G005780 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAACAGAACCTTCAGGCACAGAGAAATCCCCAATTCCAAAATCCTCATCGGAACCACTCCAAATGGAAATCGACCGTCCTTCCGCCGTCCAAATGCCGGAGGTTTCTCAGTACGAGCAGTCCAGAGAGTTGAGAATCAGAGAGAATTTGGAGCGTATGCAGAAGCTAGGCATCCTTGACCTCTCTCTCAAGCTCAAGTCATCCGCTCCTTCGAGGCAAAATCGCCGAAGATCGCTTAATCCGAAAGCTTCTCCACCTTCATTCAACCTCCCGCAGGCAGTAGCCGTCCGCCGATCATCCAGGTTCTCTTCGAATCATGAATCTCACTTTCTTAGCCCTAACATGAACCGACTGGACTCGTTCTCTGATCTTGCCATGAAATTGAGAATATTATGTTTTTTTTTCCTCTTAATCTTGTCTATTGTGATTTTCTTTTGCGGATTTAGGTTACAGAATGTGACGCCAGTGACTTACTCTGAACTTCGAGTGGAGAGAAAAAGCAAGTTTTCAGAGGATGAAGGCGTGATTCTTGAAGATGGTTCGAGGCCGGAGATATACTCGGAAGAGCATGAGAAGCGGTTGGGCAGTACAGAGAAGATCTGGACGCTGTTTGTGGATGGATATGGTAAGGATGGGAAACGAATTTATGATCCAGTAAAGGGAAAAACGTGCCATCAATGCAGGTTTGTGCATTGTTTTCTGATTTTGTTAATCTTTGACATGATGAGTATGTTTGGTTTATTGAAATTAGAACTGAATTAGAAAGCAAGAACAGCTTTGTTTAATTAGTGGAAAATGCTATGTATCAATCATATCTTACAGGCAAAAAACATTAGGGCATCGCACTCATTGCAGCAAATGCAACATGGTCCAAGGGCAATTTTGTGGAGACTGTCTGTATATGAGGTACACTCGCGATATCCGCAATTTGACATATTTGTGTTTGTCGAGGATGGTTGGGAGGGAGTCCCACGTTAGCTAATTTAGGGAATGATCATGGGTTTATAAGTAAACAATACATCTCCATTAGTATGAAGTTTTTTGGGGAAGCCTAAAACAAAACTATGAGAGCTTATGCTCAAAGTAGACAATATCGTACCAGTGTGAAGAGTCGCGATTCCTAACATTTTCCTAACATTCTTTTTCCAATTTTGGGCAGATATGGAGAGCATGTTCTTGAAGCGCAGGAAAATCCCAGTTGGATATGTCCTGTTTGTCGTGGAATTTGTAACTGCAGTTTATGTCGCCAAGCAAAGGGATGGCTTCCTACTGGGAGTCTGTATAAGAAGGTAAATTTCTAAGCCATTGTGTACTGTTTTGGTCAGGAGAATTTGCAGCTAAGGTCAATGGTTTGAACTGTAATAGATAGCAAGGATGGGGTTCAAGTCTGTTGCGCATTTTCTCATTCAAACCAAGCGTCCACAGCCTAATTCTGGGCAGAATCCTACTGATCTCGCTTCTGCTAAGAGGGCCTTGTCCTTCCCAGATCTTGAAGCTAATCCTGTAGGATCTCTTAGTGTTAATGATCAAATGTCTGTTAAGAGGTCACTGAGTTTTTCATGTCTGGAGCAGCAGGGCTCAAAACAATGTAAACCATATCATCTGGATCATGAAAATGATGAACAGTCACAGCATCAATCTGCAAACTATGATGAACTTGGAGAAGACGTTGTCAACGAGAAAGAACAGTCAGTGCATTGCCTAAAAAGGAAGAATGATGGTGATAACTACAGTCCAATGCCTGTAAAGAAACCAACAATTAGAGTAGAATCAAGCACCGTGGATCAAAGCCTGGAAAAGAAGATTGATGATATTAGGTGCCTAACAAGCTCAAGGGTCATTCAAGAAAGTGATGATAAAACATCAGAAGAGGGTGCAAACAGTTTGTCAAAGAAGAAGCTGAAATGTGTAAGTAATGGTAGGGTATTACGGCCTAGACATCAAAGCCTCGAGAAGACAACTGATATTAGCAGCCAAACTACCATCCTGGAAGGCGGCACCTCTTCATCGGAGCTAAAATCAGCCACTAGCAGTAGGGTTTTGCGGCCTAGACATAAACCAATGATGTAGAGCTACACACTACGTGTTTTAGTCTTACCATTAAAGTTTTGAGCTTTGTTACGAGTTTTATTATTGATTATAATGAAATACGACTCTCC AAATAACAGAACCTTCAGGCACAGAGAAATCCCCAATTCCAAAATCCTCATCGGAACCACTCCAAATGGAAATCGACCGTCCTTCCGCCGTCCAAATGCCGGAGGTTTCTCAGTACGAGCAGTCCAGAGAGTTGAGAATCAGAGAGAATTTGGAGCGTATGCAGAAGCTAGGCATCCTTGACCTCTCTCTCAAGCTCAAGTCATCCGCTCCTTCGAGGCAAAATCGCCGAAGATCGCTTAATCCGAAAGCTTCTCCACCTTCATTCAACCTCCCGCAGGCAGTAGCCGTCCGCCGATCATCCAGGTTACAGAATGTGACGCCAGTGACTTACTCTGAACTTCGAGTGGAGAGAAAAAGCAAGTTTTCAGAGGATGAAGGCGTGATTCTTGAAGATGGTTCGAGGCCGGAGATATACTCGGAAGAGCATGAGAAGCGGTTGGGCAGTACAGAGAAGATCTGGACGCTGTTTGTGGATGGATATGGTAAGGATGGGAAACGAATTTATGATCCAGTAAAGGGAAAAACGTGCCATCAATGCAGGCAAAAAACATTAGGGCATCGCACTCATTGCAGCAAATGCAACATGGTCCAAGGGCAATTTTGTGGAGACTGTCTGTATATGAGATATGGAGAGCATGTTCTTGAAGCGCAGGAAAATCCCAGTTGGATATGTCCTGTTTGTCGTGGAATTTGTAACTGCAGTTTATGTCGCCAAGCAAAGGGATGGCTTCCTACTGGGAGTCTGTATAAGAAGATAGCAAGGATGGGGTTCAAGTCTGTTGCGCATTTTCTCATTCAAACCAAGCGTCCACAGCCTAATTCTGGGCAGAATCCTACTGATCTCGCTTCTGCTAAGAGGGCCTTGTCCTTCCCAGATCTTGAAGCTAATCCTGTAGGATCTCTTAGTGTTAATGATCAAATGTCTGTTAAGAGGTCACTGAGTTTTTCATGTCTGGAGCAGCAGGGCTCAAAACAATGTAAACCATATCATCTGGATCATGAAAATGATGAACAGTCACAGCATCAATCTGCAAACTATGATGAACTTGGAGAAGACGTTGTCAACGAGAAAGAACAGTCAGTGCATTGCCTAAAAAGGAAGAATGATGGTGATAACTACAGTCCAATGCCTGTAAAGAAACCAACAATTAGAGTAGAATCAAGCACCGTGGATCAAAGCCTGGAAAAGAAGATTGATGATATTAGGTGCCTAACAAGCTCAAGGGTCATTCAAGAAAGTGATGATAAAACATCAGAAGAGGGTGCAAACAGTTTGTCAAAGAAGAAGCTGAAATGTGTAAGTAATGGTAGGGTATTACGGCCTAGACATCAAAGCCTCGAGAAGACAACTGATATTAGCAGCCAAACTACCATCCTGGAAGGCGGCACCTCTTCATCGGAGCTAAAATCAGCCACTAGCAGTAGGGTTTTGCGGCCTAGACATAAACCAATGATGTAGAGCTACACACTACGTGTTTTAGTCTTACCATTAAAGTTTTGAGCTTTGTTACGAGTTTTATTATTGATTATAATGAAATACGACTCTCC ATGGAAATCGACCGTCCTTCCGCCGTCCAAATGCCGGAGGTTTCTCAGTACGAGCAGTCCAGAGAGTTGAGAATCAGAGAGAATTTGGAGCGTATGCAGAAGCTAGGCATCCTTGACCTCTCTCTCAAGCTCAAGTCATCCGCTCCTTCGAGGCAAAATCGCCGAAGATCGCTTAATCCGAAAGCTTCTCCACCTTCATTCAACCTCCCGCAGGCAGTAGCCGTCCGCCGATCATCCAGGTTACAGAATGTGACGCCAGTGACTTACTCTGAACTTCGAGTGGAGAGAAAAAGCAAGTTTTCAGAGGATGAAGGCGTGATTCTTGAAGATGGTTCGAGGCCGGAGATATACTCGGAAGAGCATGAGAAGCGGTTGGGCAGTACAGAGAAGATCTGGACGCTGTTTGTGGATGGATATGGTAAGGATGGGAAACGAATTTATGATCCAGTAAAGGGAAAAACGTGCCATCAATGCAGGCAAAAAACATTAGGGCATCGCACTCATTGCAGCAAATGCAACATGGTCCAAGGGCAATTTTGTGGAGACTGTCTGTATATGAGATATGGAGAGCATGTTCTTGAAGCGCAGGAAAATCCCAGTTGGATATGTCCTGTTTGTCGTGGAATTTGTAACTGCAGTTTATGTCGCCAAGCAAAGGGATGGCTTCCTACTGGGAGTCTGTATAAGAAGATAGCAAGGATGGGGTTCAAGTCTGTTGCGCATTTTCTCATTCAAACCAAGCGTCCACAGCCTAATTCTGGGCAGAATCCTACTGATCTCGCTTCTGCTAAGAGGGCCTTGTCCTTCCCAGATCTTGAAGCTAATCCTGTAGGATCTCTTAGTGTTAATGATCAAATGTCTGTTAAGAGGTCACTGAGTTTTTCATGTCTGGAGCAGCAGGGCTCAAAACAATGTAAACCATATCATCTGGATCATGAAAATGATGAACAGTCACAGCATCAATCTGCAAACTATGATGAACTTGGAGAAGACGTTGTCAACGAGAAAGAACAGTCAGTGCATTGCCTAAAAAGGAAGAATGATGGTGATAACTACAGTCCAATGCCTGTAAAGAAACCAACAATTAGAGTAGAATCAAGCACCGTGGATCAAAGCCTGGAAAAGAAGATTGATGATATTAGGTGCCTAACAAGCTCAAGGGTCATTCAAGAAAGTGATGATAAAACATCAGAAGAGGGTGCAAACAGTTTGTCAAAGAAGAAGCTGAAATGTGTAAGTAATGGTAGGGTATTACGGCCTAGACATCAAAGCCTCGAGAAGACAACTGATATTAGCAGCCAAACTACCATCCTGGAAGGCGGCACCTCTTCATCGGAGCTAAAATCAGCCACTAGCAGTAGGGTTTTGCGGCCTAGACATAAACCAATGATGTAG
BLAST of CmoCh02G005780 vs. Swiss-Prot
Match: CDA7L_HUMAN (Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=2) HSP 1 Score: 113.2 bits (282), Expect = 7.5e-24 Identity = 52/101 (51.49%), Postives = 62/101 (61.39%), Query Frame = 1
BLAST of CmoCh02G005780 vs. Swiss-Prot
Match: CDA7L_MOUSE (Cell division cycle-associated 7-like protein OS=Mus musculus GN=Cdca7l PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.3e-23 Identity = 51/101 (50.50%), Postives = 61/101 (60.40%), Query Frame = 1
BLAST of CmoCh02G005780 vs. Swiss-Prot
Match: CDA7L_RAT (Cell division cycle-associated 7-like protein OS=Rattus norvegicus GN=Cdca7l PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.7e-23 Identity = 51/101 (50.50%), Postives = 61/101 (60.40%), Query Frame = 1
BLAST of CmoCh02G005780 vs. Swiss-Prot
Match: CDCA7_HUMAN (Cell division cycle-associated protein 7 OS=Homo sapiens GN=CDCA7 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.7e-23 Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 1
BLAST of CmoCh02G005780 vs. Swiss-Prot
Match: CDCA7_MOUSE (Cell division cycle-associated protein 7 OS=Mus musculus GN=Cdca7 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-22 Identity = 52/107 (48.60%), Postives = 65/107 (60.75%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TrEMBL
Match: A0A0A0LQ16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292760 PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 2.7e-137 Identity = 251/357 (70.31%), Postives = 283/357 (79.27%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TrEMBL
Match: A0A067GV94_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010294mg PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 2.6e-100 Identity = 184/282 (65.25%), Postives = 223/282 (79.08%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TrEMBL
Match: V4SPK3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025387mg PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 1.7e-99 Identity = 182/282 (64.54%), Postives = 222/282 (78.72%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TrEMBL
Match: A0A061DG61_THECC (Zinc-finger domain of monoamine-oxidase A repressor R1, putative OS=Theobroma cacao GN=TCM_000524 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 3.5e-97 Identity = 184/290 (63.45%), Postives = 223/290 (76.90%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TrEMBL
Match: B9HEF1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11820g PE=4 SV=2) HSP 1 Score: 360.1 bits (923), Expect = 3.9e-96 Identity = 178/273 (65.20%), Postives = 218/273 (79.85%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TAIR10
Match: AT2G23530.1 (AT2G23530.1 Zinc-finger domain of monoamine-oxidase A repressor R1) HSP 1 Score: 317.0 bits (811), Expect = 1.9e-86 Identity = 176/339 (51.92%), Postives = 221/339 (65.19%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TAIR10
Match: AT4G37110.1 (AT4G37110.1 Zinc-finger domain of monoamine-oxidase A repressor R1) HSP 1 Score: 302.8 bits (774), Expect = 3.8e-82 Identity = 157/270 (58.15%), Postives = 193/270 (71.48%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TAIR10
Match: AT1G67270.1 (AT1G67270.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein) HSP 1 Score: 105.9 bits (263), Expect = 6.7e-23 Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TAIR10
Match: AT1G67780.1 (AT1G67780.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein) HSP 1 Score: 105.1 bits (261), Expect = 1.1e-22 Identity = 51/104 (49.04%), Postives = 57/104 (54.81%), Query Frame = 1
BLAST of CmoCh02G005780 vs. TAIR10
Match: AT5G38690.1 (AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein) HSP 1 Score: 90.5 bits (223), Expect = 2.9e-18 Identity = 44/102 (43.14%), Postives = 51/102 (50.00%), Query Frame = 1
BLAST of CmoCh02G005780 vs. NCBI nr
Match: gi|659116023|ref|XP_008457859.1| (PREDICTED: uncharacterized protein LOC103497443 [Cucumis melo]) HSP 1 Score: 522.3 bits (1344), Expect = 8.5e-145 Identity = 293/497 (58.95%), Postives = 344/497 (69.22%), Query Frame = 1
BLAST of CmoCh02G005780 vs. NCBI nr
Match: gi|449460670|ref|XP_004148068.1| (PREDICTED: cell division cycle-associated protein 7-like [Cucumis sativus]) HSP 1 Score: 496.9 bits (1278), Expect = 3.8e-137 Identity = 251/357 (70.31%), Postives = 283/357 (79.27%), Query Frame = 1
BLAST of CmoCh02G005780 vs. NCBI nr
Match: gi|719997364|ref|XP_010255074.1| (PREDICTED: uncharacterized protein LOC104595844 [Nelumbo nucifera]) HSP 1 Score: 374.4 bits (960), Expect = 2.9e-100 Identity = 182/275 (66.18%), Postives = 221/275 (80.36%), Query Frame = 1
BLAST of CmoCh02G005780 vs. NCBI nr
Match: gi|641860683|gb|KDO79372.1| (hypothetical protein CISIN_1g010294mg [Citrus sinensis]) HSP 1 Score: 374.0 bits (959), Expect = 3.8e-100 Identity = 184/282 (65.25%), Postives = 223/282 (79.08%), Query Frame = 1
BLAST of CmoCh02G005780 vs. NCBI nr
Match: gi|567866367|ref|XP_006425806.1| (hypothetical protein CICLE_v10025387mg [Citrus clementina]) HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99 Identity = 182/282 (64.54%), Postives = 222/282 (78.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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