CmoCh02G005560 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G005560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CLK4-associating serine/arginine rich
Location	Cmo_Chr02 : 3147491 .. 3154229 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTATTGAATTGAAAGCACCGCAGACCGTGTTCGTCATCGGGAACTTGGTGGTTCCATCATCCACGAGGAGAGAAGGGGATTAGGGTTTTTACGTTGTCCTGATTTGATCCAAATCCTTTAGAATTTTCATTGCTGATTTTCCAGAGATGTGGCACGAGGCAAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGGAAGCGAGCTCAAAGACGCGCTGTGTTTCTTGCCAAGCGTCGTGGCGATCCTCAGCAATCCATCCAGGTCGTTGGTACTCGGTGCCGCGTCTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAGCAAGGCCTGTAAGAATTTTGTATTTCATCTCTGCTTTAGATATCAAAACTTGGGTGTAGTATGAATTGTGATTTTTTTAAGTGTTCTAGATACTTGGAATTGGCTTATGTTCTCTGCTGCTTTCTGTCATTAGCGTATAAATGTTAAATTTGTTCCAATTGCTGCAATTTGTTTGTCTTTTGAAAGTTGTTTGCGTAGTGCTGAAGGGAAATTTTGGGAATTGGACGGTAGGGTTCAACTGCATCACAATTCCGCAACATTCTTCGCCTTCACTTTATTCATTGAGTTATTTAAAACGACTACCAAAGGATGCATTCATTTGCGTATCTATAGGAGGGTTTGATTGCAGGAGGTTGTACGTTTTTTTTAAAGTTCTAACCTTCCCGTTTCACCTCTAACAGAATGAGTACTTCACTGGAATTGTCTTTTACCTTTTCCCATTGTCAGGGCATGTTTATACTAGTTCGGTGGCATTATTATTTTTGAGCATCCGAACACTTACTTTATCTTAATGCTTTAACTTCTTTTTGTAACTTCTGTCTCAGGATTCCTTGGAATGGAAAGCAGGATGTTATGATTGACAGGTTCAATTCTTTTAGTTTTAATCATCTGAGGACTGTTTCAATTTGAAACTTTATGTTTAGCTAATGATTTATGATTTAAGGTTGAGGAGTAGGTTTTTCATTTTTTGAGCAGATTTGATGGACGTGCTTTGCTTGATTTCATACGAGAACCTGGATCTCGACATATTCGAACACAAGAAAAATCTGAGGAAGAAGAGGAGTTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGGCGTCGAGGATGTGGGTACTTCTTTTTACTTTTATCGAACTCTTAAATCCTCTTACAGTTCAATGCACAAACCCACTACTTTCCTTATATGATGAGCAATAAGGACAAAGGTTATTTTTATTTGTATTGCTTTTCATGATGATGCAAATAATTAACTGAACTTTCTACATTTCTATGTCAACAGTTAATGATGAGGATGGTTTACAACATGTGAATCAAGAAATGGAGGCCAAGGTGTCTGCTCCATTCGTATCGGACAGGTTTCTCTCCCCTTCTCATTTTCTGTCTCCCTTTATATCCATGGATGGGCATGGAAAAATATTTTGCTCTAGTTTTCCCAGTTCACATCTCTCAAATTATTTGGAAGTTTCTCTCTCACTCTAAGCTGTGAGGTGGTTTGGGTTTTGGCAATTCAAATAGAAAGAATATGCTGCTTTTACTAAATTTTCCATTATAGTATCTCAAGAAGTCCGTGGTATTCTTGTCAAGCTCAAGGACTTAATTATGCAAGTGGTAGGTAGTTTAAATATCAGGTTTAGTGTTGACTGATGGGTTAGCACTTCACATTTTTCTGACCAAGCGGAAATAATACTTACTATGATCTTTGAGGTAGCGTGGGCTGTAGAAAATTTCAGTTGGGTTATTAGCTTCAGAAGATCTTAAATGATAGAGAAGTTAGTGAATGGATGGAGCTTTATTCCCTGTTTGATAGTTTTTGCCCGGGTAAAAAAAAAAAAAAAACAAATAGTGGTTTTTGCTGTCAGATTTCTTTTTATTGCTTTGGTTGCTTCTACGATCAAGTCTTTGGTGGAACATCCATTCAAGGGAGACAAGATGACTTTGTGGCTTGCCTTTAATCGTTCCTTTTTTTGATCTCTTTGTTGTGAAAGTAATGGAAGGAGCTTCAATGACAAACATTCATCCTTTTACACCTTTAAGGATTTGTTTAATTCTCTTTGTTGATGTAAATGTTCACACCTTTTTGAAGATAAACAGTATTTCTTCTTTAATTTACAATTGGAGATCATTTTTGTAATCCACCGTTGGTGGTAATTTCATTCATCCTTGAAATTTTCTGTTTCACTCAAAGGAAAAAAAAAAAAAAAAAGACATTATTTTTGTTTTACTTAAGGACTCATTAATAAGTGGGAGGGTAAAGATTTTATTTGTTTATATGCCTTGCCGTAAACTGTGTGAATAGGATGTAATGGTTGCGTCATTTGCTAAAGAACTGTTTTGTTGGGCTTGATTTTTAGTTGTTTCTTCCTTATTATTATTATTATTATTTAGAACATGTTTTTTTTTTCTCTCTGTACGTCTTCCTCCGTTCAGCCCTCTCTACACTAGACTCCTCATCCCTTTTCGTTGCCTAACCCATCGGAGCTTCAACTCCATCATCCTCTATGAATCGAAGGTCTTCAACAACCAACACTCTCCACTAACTGGAAAAATTTATCAGTCAACAGTACCCATGGATTTCACATCATTGAAACTACGGACTGATCCTTTACCCTTGATCTTAAAAAAGACTCACATCCATGGCTGGTCTTTATTTTTCTTTTTTCCTTGTTGAACACATTATTTTGGCATGATTGTTGGTTGAATTAGGAAACCTTGGCTAATAAGTTCCCAAAATTATACTCCATCTCTACATAAAGATATTTCCATAGCAGGATCGTGGAACACAAAACATGGTGAGTAGAATTTGAATTTGAGGAGAAACCTCACTGATGATGAAAGAGGAATGGATTAGGTTCATAGACATCCTGAATGGTGTCCAATTAAACCCCTCCAAAGATCCATGGCTGTGGAAATTAGACTTGAGATGCTCTTTTCCCACTATATCTTCTGCTCAATCTTGACGACAACATGCCGGCAACTATTCATCCCCTATATCTTGCCACTTTGCCAACAGATTTTGGGAGACTCACTCAGCTTTCAGCTGGTACACAGCCTTTCCGAGTGTGATTAACAGCCTTCTTACCTGCACTCTAAATGGTCATCCTTTTTTGTATACTTCTTCTCCGGGCTACTTTGTTTACAACTTGGAAGAAGTGCAACCATTAACTTCTCAGAGATAAAATAAACTTCTTTTGATAGCTTTTTTGAAACAAATTATTTTTCTTGTTATGCCTTTGTGTAAATGCACGCTCTTCTTTGGTTCTTACCCTCTTTTGACGAATGGGAGAAGCTTTCTTCCAACTTTTTGGTTGGGACTTTGCCCTTTTTCTTTTTGTAAATTTCATACATCAATGAAATTTGTTCCCAATAAAAAAAATGTCCACAAGTCTCCCACCCCTTCCCACTCCACTTAGAAAGTGTGGACAACCTAATTATGGCCACATCAGCGTGCAAAGGATTCATATTCATCATACACCCATCTTTAACATGCTCTTCAATCAAAGCCTCCCAAATATTCTACCAACCATCATGAAATCATAGTCTAGTCATGGATACTAGTTTCTTTCAGCTGATTTTGTTTTTATTGAACCTACAATTCACCTTTCTCTCCTTGACAAGGTTTCCTGCCTCACCTCCATCTAAGAAGTGTTGCTATTCTCCCCTTCCAACACTCCATTACCCATTTTCATCTTGAGGTCTCCAAGAGTAAAGCTCCCATAACATAGTCCATGCACCCCTGTTTAAAGGATTCTACTCTTAGTGGTGTTTAAAAGTTGGATCAACCTTTCTTAGCGCGCTTTTGAAGTGCTTACGTCCCTTAGTTGGGTTGGGGGAAGGAAGAGGGCATCATCTTCATGTTGGGACATTTTCCCACTTATAGAGTTACATATTAGATTGTTGCAATTTTTTGGGGCGTAAAATTCTATTTTGCTCTAAATTTTGTTTCTCAGGCTTTCTGTTCTTTTTGTTCTCTCTTTAGTTTTATGGGTGAACTGCTGCTGTTGAATTTTACATAAGTTTATGGTTTTTCTTGTGTATATGTGAAGATCTCAGCCACCACAGCCTCCTGCTGCTGCAAGCAAGGGGTCATACTCACAAGTGGGATTTTCGTATGAGGCGGATGGGAAGGAGGAATCAAATTCAGATGCAGATGATAATGCTAGTGATGATGAAGATGATGAGGATGAGGACGAGGAGGTTTTTAACAGTGATGACAGTAATGATGAAGGAATGGAGGTAATGGCAAAAGAGTTTGGTGTAAAAAGATATGGTTGGCTTGTTTACATGGATAAAAAGGCTAAGGAGGAAGAAAAGAGGCAAAAGGAAATAATCAAAGGCGATCCTGCAATAGTAAGTTCCTCCTATCAGGATTCAAAAAATACCACATATTTTTTTGAGCTCCCTGATAGTGAAATGTCTCATAAACCTAAAATCTGAAACTCTTAGAGGAAGCTAAGTCGCAAGGAAAGAAGGAAAGCATCTCAAATGGAACGGGAAAGGGAAAGAGAAGCTGCACGAGTTACTGGTACCAGAGTCCTTCATCATGATCCTTACCGGTATAGATACTTTTTTTTTTTGTGTGATATGGATTGGATAAAAGTTCACTTTTGTTTTTAACTGGTATGGTATGTCAGTTGCCTTTTTATGATCAATAACCTTGCATTCTATTTTCACGTGCAGAGAATCTAGACGAAGTCCAACTTATGATGCTTATCCACGTTCTAGAAGGTATGTATTTTTATCTAAGCTTCTTAGCAGGGTTTGTGGATTCTAAGGATAAAAATTGATTTTCTAAATTACTATTATGTAATATTGTTCTGCAGATCAAGGTCCAGATCACATTCCCCATCACACTCAAGGCGTCATTCTCGAGGGCATTCTGATGATGTTCATCGGAACAAACCAAGGACTCCCAAAATTGAATTTATCACCGAATTTGGAGGCCCTGGCGAAAGCAAGGAACCAAGGCTAGAAGGACTATCTCCACCACAATCTCCTCCATCTCAGCCTGATATGTTAAACCGGTCGGAGCACTCGACCTTTCATTCTTGCGAAGATAGATTGGACAATCTTTACTGTGCTGCAGCTTTCTCCCATTTTGTTTCCCGAGACCAACTTGTGTGGTTTAGTATAGATCAGGCCTAGGATTTTCAGCGTAACTGCCACAGCAAGATGGAAGGAGGCTTCCTTTTTGAAGCTCAGATATTCCCCTAAAATGGATTTTAGCATAATCACTAGAAAATGTGCATGAAACTCTTAAAATGAGCATGTCTGACCCCTGTGCTTTCATGCAGGCCATCATCTGGTCGTATACTCGAGGCATTGCATATTGACCCAGCGTCTGGCATGACACTTGATAATGAAAAGAGCAGCAGAGCGGTAAAACCATCAGTAAGGTATTTATGAAGTCTGAATTTACTTTAGTTTCAAGTCCTGTGCACTGAGGCTGATGAACTTCCAATACTCATGTTTGGTGCCTTTTGCATGTATAAAGTTAACTTTTTAAAATACTTATGGGCATTAAGTCCTTGTACATTAATTATGAACATTTGAGTCCTTGTCTAATAAGTACGGGTGTTTGAGTCCTCGTACAGTAACTATGAGCATTGAAGTTTTTGTACAATAATTATGGACATTTATTTGCTTGAGCAGTACGTCGTCAGCACTTGCAAAGTTAACTAAGGCAAGTTCTTCCGGGGGACCTTTAAAGCTGGGAGAAAAGAAAGAAACTCCCCAAGAACGACTTAAGAGGATCATGAGTCAACAACTTAATAAACAAAGTAAGTGCCAATGGATTTGTATTTCCATTGTGAAGGAGCTTTCAGGACAGCTTCTCTCTTGAACATTTTAATATCAATCAATAGAGATGAGTAGATGTCCTTATGTCTTTTGAACCTTCTTCTCTTCTTTATGTTTGGTATTGAAAATCATCTTTATTTCAAGATCTCTTAATATCTTCTCTGGCATTTATGGTTGAACTGTTGGACGACCTGTGCAGTTAAGAAAGATACAGCTGCGGAAATGGCTAAAAAGAGAGAGCAGGAGCGCCAGAGACTGGAAAAACTGGCGGAAACCAGCCGATTAAATAGCCATCGGCGTCGGAGCCGCAGCAGAAGCTACAGTCGTTCACCACGAAGGTAAGTTATATTTGAAGTTTTAACCAAATGATTGAGATTTTTTAAATCTGGGAGCAATTAACCCTACTTTGAGACCTTATGTTTATTTAAGGTCTTGACTTATGGATGATTTGATTGCTACTTATTGCAGAAGATACCGTCGGAGTAGGAGTAGGAGTAGAAGTAGAGGTTCTCGGAGATATTATTCTCGGTCTCGGTCTCGATCTCGTTCTCACTCTCGAAGCCATTCTCGCTCACATTCCCGTTCACCTTCTTATTCCCCGTCACCAAGGTAATGCTTCCTTAGCCTCATTATTCGTCCTTATTCCATAACTAGTTGGAATGTATTTGGATAACATGATGATAACGTGAGGCAAATATTGCAGCAGGGTAAGGAGTCGTACGAGGTATTAAAAATGGAGTGCTGAATCCTTTTCTGGAATATCTGATTTTCATCATACTCTATTATCTTAGAGCTGAAAATATTTTTGTAATGTTTCGTACTCTGGATAGATGTATTTTAATGCCAGCTCCGAATCTATTCCTTTAG

mRNA sequence

AGCTATTGAATTGAAAGCACCGCAGACCGTGTTCGTCATCGGGAACTTGGTGGTTCCATCATCCACGAGGAGAGAAGGGGATTAGGGTTTTTACGTTGTCCTGATTTGATCCAAATCCTTTAGAATTTTCATTGCTGATTTTCCAGAGATGTGGCACGAGGCAAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGGAAGCGAGCTCAAAGACGCGCTGTGTTTCTTGCCAAGCGTCGTGGCGATCCTCAGCAATCCATCCAGGTCGTTGGTACTCGGTGCCGCGTCTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAGCAAGGCCTGATTCCTTGGAATGGAAAGCAGGATGTTATGATTGACAGATTTGATGGACGTGCTTTGCTTGATTTCATACGAGAACCTGGATCTCGACATATTCGAACACAAGAAAAATCTGAGGAAGAAGAGGAGTTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGGCGTCGAGGATTTAATGATGAGGATGGTTTACAACATGTGAATCAAGAAATGGAGGCCAAGGTGTCTGCTCCATTCGTATCGGACAGATCTCAGCCACCACAGCCTCCTGCTGCTGCAAGCAAGGGGTCATACTCACAAGTGGGATTTTCGTATGAGGCGGATGGGAAGGAGGAATCAAATTCAGATGCAGATGATAATGCTAGTGATGATGAAGATGATGAGGATGAGGACGAGGAGGTTTTTAACAGTGATGACAGTAATGATGAAGGAATGGAGGTAATGGCAAAAGAGTTTGGTGTAAAAAGATATGGTTGGCTTGTTTACATGGATAAAAAGGCTAAGGAGGAAGAAAAGAGGCAAAAGGAAATAATCAAAGGCGATCCTGCAATAAGGAAGCTAAGTCGCAAGGAAAGAAGGAAAGCATCTCAAATGGAACGGGAAAGGGAAAGAGAAGCTGCACGAGTTACTGGTACCAGAGTCCTTCATCATGATCCTTACCGAGAATCTAGACGAAGTCCAACTTATGATGCTTATCCACGTTCTAGAAGATCAAGGTCCAGATCACATTCCCCATCACACTCAAGGCGTCATTCTCGAGGGCATTCTGATGATGTTCATCGGAACAAACCAAGGACTCCCAAAATTGAATTTATCACCGAATTTGGAGGCCCTGGCGAAAGCAAGGAACCAAGGCTAGAAGGACTATCTCCACCACAATCTCCTCCATCTCAGCCTGATATGTTAAACCGGTCGGAGCACTCGACCTTTCATTCTTGCGAAGATAGATTGGACAATCTTTACTGTGCTGCAGCTTTCTCCCATTTTGTTTCCCGAGACCAACTTGTGTGGTTTACATGTCTGACCCCTGTGCTTTCATGCAGGCCATCATCTGGTCGTATACTCGAGGCATTGCATATTGACCCAGCGTCTGGCATGACACTTGATAATGAAAAGAGCAGCAGAGCGGTAAAACCATCAGTAAGTACGTCGTCAGCACTTGCAAAGTTAACTAAGGCAAGTTCTTCCGGGGGACCTTTAAAGCTGGGAGAAAAGAAAGAAACTCCCCAAGAACGACTTAAGAGGATCATGAGTCAACAACTTAATAAACAAATTAAGAAAGATACAGCTGCGGAAATGGCTAAAAAGAGAGAGCAGGAGCGCCAGAGACTGGAAAAACTGGCGGAAACCAGCCGATTAAATAGCCATCGGCGTCGGAGCCGCAGCAGAAGCTACAGTCGTTCACCACGAAGAAGATACCGTCGGAGTAGGAGTAGGAGTAGAAGTAGAGGTTCTCGGAGATATTATTCTCGGTCTCGGTCTCGATCTCGTTCTCACTCTCGAAGCCATTCTCGCTCACATTCCCGTTCACCTTCTTATTCCCCGTCACCAAGCAGGGTAAGGAGTCGTACGAGAGCTGAAAATATTTTTGTAATGTTTCGTACTCTGGATAGATGTATTTTAATGCCAGCTCCGAATCTATTCCTTTAG

Coding sequence (CDS)

ATGTGGCACGAGGCAAGGAGATCCGAGAGGAAGGTCCACGACATGATGGACGCTGCTCGGAAGCGAGCTCAAAGACGCGCTGTGTTTCTTGCCAAGCGTCGTGGCGATCCTCAGCAATCCATCCAGGTCGTTGGTACTCGGTGCCGCGTCTACCGTGACGATGGTCTCTATCAAGCAACTCAGGACCAGCAAGGCCTGATTCCTTGGAATGGAAAGCAGGATGTTATGATTGACAGATTTGATGGACGTGCTTTGCTTGATTTCATACGAGAACCTGGATCTCGACATATTCGAACACAAGAAAAATCTGAGGAAGAAGAGGAGTTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGGCGTCGAGGATTTAATGATGAGGATGGTTTACAACATGTGAATCAAGAAATGGAGGCCAAGGTGTCTGCTCCATTCGTATCGGACAGATCTCAGCCACCACAGCCTCCTGCTGCTGCAAGCAAGGGGTCATACTCACAAGTGGGATTTTCGTATGAGGCGGATGGGAAGGAGGAATCAAATTCAGATGCAGATGATAATGCTAGTGATGATGAAGATGATGAGGATGAGGACGAGGAGGTTTTTAACAGTGATGACAGTAATGATGAAGGAATGGAGGTAATGGCAAAAGAGTTTGGTGTAAAAAGATATGGTTGGCTTGTTTACATGGATAAAAAGGCTAAGGAGGAAGAAAAGAGGCAAAAGGAAATAATCAAAGGCGATCCTGCAATAAGGAAGCTAAGTCGCAAGGAAAGAAGGAAAGCATCTCAAATGGAACGGGAAAGGGAAAGAGAAGCTGCACGAGTTACTGGTACCAGAGTCCTTCATCATGATCCTTACCGAGAATCTAGACGAAGTCCAACTTATGATGCTTATCCACGTTCTAGAAGATCAAGGTCCAGATCACATTCCCCATCACACTCAAGGCGTCATTCTCGAGGGCATTCTGATGATGTTCATCGGAACAAACCAAGGACTCCCAAAATTGAATTTATCACCGAATTTGGAGGCCCTGGCGAAAGCAAGGAACCAAGGCTAGAAGGACTATCTCCACCACAATCTCCTCCATCTCAGCCTGATATGTTAAACCGGTCGGAGCACTCGACCTTTCATTCTTGCGAAGATAGATTGGACAATCTTTACTGTGCTGCAGCTTTCTCCCATTTTGTTTCCCGAGACCAACTTGTGTGGTTTACATGTCTGACCCCTGTGCTTTCATGCAGGCCATCATCTGGTCGTATACTCGAGGCATTGCATATTGACCCAGCGTCTGGCATGACACTTGATAATGAAAAGAGCAGCAGAGCGGTAAAACCATCAGTAAGTACGTCGTCAGCACTTGCAAAGTTAACTAAGGCAAGTTCTTCCGGGGGACCTTTAAAGCTGGGAGAAAAGAAAGAAACTCCCCAAGAACGACTTAAGAGGATCATGAGTCAACAACTTAATAAACAAATTAAGAAAGATACAGCTGCGGAAATGGCTAAAAAGAGAGAGCAGGAGCGCCAGAGACTGGAAAAACTGGCGGAAACCAGCCGATTAAATAGCCATCGGCGTCGGAGCCGCAGCAGAAGCTACAGTCGTTCACCACGAAGAAGATACCGTCGGAGTAGGAGTAGGAGTAGAAGTAGAGGTTCTCGGAGATATTATTCTCGGTCTCGGTCTCGATCTCGTTCTCACTCTCGAAGCCATTCTCGCTCACATTCCCGTTCACCTTCTTATTCCCCGTCACCAAGCAGGGTAAGGAGTCGTACGAGAGCTGAAAATATTTTTGTAATGTTTCGTACTCTGGATAGATGTATTTTAATGCCAGCTCCGAATCTATTCCTTTAG

Homology

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BLAST of CmoCh02G005560 vs. Swiss-Prot
Match: CLASR_MOUSE (CLK4-associating serine/arginine rich protein OS=Mus musculus GN=Clasrp PE=1 SV=3)

HSP 1 Score: 96.7 bits (239), Expect = 9.7e-19
Identity = 121/382 (31.68%), Postives = 180/382 (47.12%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGFNDEDGLQHVN-QEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYE-- 180
           L+++   G ++E  L  +   E+   +  P     S+  +   A  K S   +G++YE  
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRP-----SEDEKKKLAEKKAS---IGYTYEDS 180

Query: 181 --------ADGKEESNSDADDNASDDEDDEDEDEEV-FNSDDSNDEGMEVMAKEFGVKRY 240
                   A+  EE  S A++ ++ DED+   D +V  + D+ N E +  + K+     Y
Sbjct: 181 TVAEVEKVAEKPEEEESPAEEESNSDEDEVIPDIDVEVDVDELNQEQVADLNKQ--ATTY 240

Query: 241 GWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHH 300
           G       +   ++K + E IK   A+ +       + S+ +R   RE  R+ G ++   
Sbjct: 241 GMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFRE-KRLRGRKI--S 300

Query: 301 DPYRESRRSPTYDAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGG 360
            P    R SPTYD Y RS  S S S S S SR  S G          R  KI FIT FGG
Sbjct: 301 PPSYARRDSPTYDPYKRS-PSESSSESRSRSRSPSPG----------REEKITFITSFGG 356

Query: 361 PGESKEPRLEGLSPPQSPPSQP 371
             E         +   + P +P
Sbjct: 361 SDEEAAAAAAAAAASGAAPGKP 356

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BLAST of CmoCh02G005560 vs. Swiss-Prot
Match: CLASR_RAT (CLK4-associating serine/arginine rich protein OS=Rattus norvegicus GN=Clasrp PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 9.7e-19
Identity = 121/382 (31.68%), Postives = 180/382 (47.12%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGFNDEDGLQHVN-QEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYE-- 180
           L+++   G ++E  L  +   E+   +  P     S+  +   A  K S   +G++YE  
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRP-----SEDEKKKLAEKKAS---IGYTYEDS 180

Query: 181 --------ADGKEESNSDADDNASDDEDDEDEDEEV-FNSDDSNDEGMEVMAKEFGVKRY 240
                   A+  EE  S A++ ++ DED+   D +V  + D+ N E +  + K+     Y
Sbjct: 181 TVAEVEKVAEKPEEEESPAEEESNSDEDEVIPDIDVEVDVDELNQEQVADLNKQ--ATTY 240

Query: 241 GWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHH 300
           G       +   ++K + E IK   A+ +       + S+ +R   RE  R+ G ++   
Sbjct: 241 GMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFRE-KRLRGRKI--S 300

Query: 301 DPYRESRRSPTYDAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGG 360
            P    R SPTYD Y RS  S S S S S SR  S G          R  KI FIT FGG
Sbjct: 301 PPSYARRDSPTYDPYKRS-PSESSSESRSRSRSPSPG----------REEKITFITSFGG 356

Query: 361 PGESKEPRLEGLSPPQSPPSQP 371
             E         +   + P +P
Sbjct: 361 SDEEAAAAAAAAAASGAAPGKP 356

[Close]

BLAST of CmoCh02G005560 vs. Swiss-Prot
Match: CLASR_HUMAN (CLK4-associating serine/arginine rich protein OS=Homo sapiens GN=CLASRP PE=1 SV=4)

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-18
Identity = 118/363 (32.51%), Postives = 175/363 (48.21%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGFNDEDGLQHVN-QEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYE-- 180
           L+++   G ++E  L  +   E+   +  P     S+  +   A  K S   +G++YE  
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRP-----SEDEKKKLAEKKAS---IGYTYEDS 180

Query: 181 --------ADGKEESNSDADDNASDDEDDEDEDEEV-FNSDDSNDEGMEVMAKEFGVKRY 240
                   A+  EE  S A++ ++ DED+   D +V  + D+ N E +  + K+     Y
Sbjct: 181 TVAKVEKAAEKPEEEESAAEEESNSDEDEVIPDIDVEVDVDELNQEQVADLNKQ--ATTY 240

Query: 241 GWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHH 300
           G       +   ++K + E IK   A+ +       + S+ +R   RE  R+ G ++   
Sbjct: 241 GMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFRE-KRLRGRKI--S 300

Query: 301 DPYRESRRSPTYDAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGG 352
            P    R SPTYD Y RS  S S S S S SR  + G          R  KI FIT FGG
Sbjct: 301 PPSYARRDSPTYDPYKRS-PSESSSESRSRSRSPTPG----------REEKITFITSFGG 337

[Close]

BLAST of CmoCh02G005560 vs. Swiss-Prot
Match: CLASR_BOVIN (CLK4-associating serine/arginine rich protein OS=Bos taurus GN=CLASRP PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.7e-18
Identity = 117/363 (32.23%), Postives = 174/363 (47.93%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGFNDEDGLQHVN-QEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYE-- 180
           L+++   G ++E  L  +   E+   +  P     S+  +   A  K S   +G++YE  
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRP-----SEDEKKKLAEKKAS---IGYTYEDS 180

Query: 181 --------ADGKEESNSDADDNASDDEDDEDEDEEV-FNSDDSNDEGMEVMAKEFGVKRY 240
                    +  EE  S A++ ++ DED+   D +V  + D+ N E +  + K+     Y
Sbjct: 181 TVAEVEKVTEKPEEEESPAEEESNSDEDEVIPDIDVEVDVDELNQEQVADLNKQ--ATTY 240

Query: 241 GWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHH 300
           G       +   ++K + E IK   A+ +       + S+ +R   RE  R+ G ++   
Sbjct: 241 GMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFRE-KRLRGRKI--S 300

Query: 301 DPYRESRRSPTYDAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGG 352
            P    R SPTYD Y RS  S S S S S SR  + G          R  KI FIT FGG
Sbjct: 301 PPSYARRDSPTYDPYKRS-PSESSSESRSRSRSPTPG----------REEKITFITSFGG 337

[Close]

BLAST of CmoCh02G005560 vs. TrEMBL
Match: A0A0A0LJB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277020 PE=4 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 1.6e-246
Identity = 508/598 (84.95%), Postives = 522/598 (87.29%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRT EKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTHEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRGFNDEDGLQHVNQEMEAK+SAPFVSDRSQ PQPP+A SKGSYSQVGFSYEADG
Sbjct: 121 LIKHRRRGFNDEDGLQHVNQEMEAKMSAPFVSDRSQQPQPPSA-SKGSYSQVGFSYEADG 180

Query: 181 KEESNSDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKE 240
           KEESNSDADDNASDDEDDED++ E F+SDDSNDEGMEV+AKEFGVKRYGWLVYMDKKAKE
Sbjct: 181 KEESNSDADDNASDDEDDEDDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKE 240

Query: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTY 300
           EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAAR+TGTRVLHHDPYRESRRSPTY
Sbjct: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTY 300

Query: 301 DAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGGPGESKEPRLEGL 360
           DAYPRSRRSRSRSHSPSHSR HS GH DDVHR+KP+TPKIEFITEFGG GES        
Sbjct: 301 DAYPRSRRSRSRSHSPSHSRHHSHGHFDDVHRSKPKTPKIEFITEFGGSGES-------- 360

Query: 361 SPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVLSCRP 420
                                   E RL+ L    +                 P +  RP
Sbjct: 361 -----------------------KEPRLEGLSPPQSPPS-------------QPDMINRP 420

Query: 421 SSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP 480
           SSGRILEALHIDPASG+TLD EKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP
Sbjct: 421 SSGRILEALHIDPASGVTLDKEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP 480

Query: 481 QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSYSRSP 540
           QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNS R RSRSRSYSRSP
Sbjct: 481 QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSP 540

Query: 541 RRRYR--RSRSRSRSRGSRRYYSRSRSRSRSHSRSHSRSHSRSPSYSPSPSRVRSRTR 597
           RRRYR  RSRSRSRSRGSRRYYSRSRSRSRS SRSHSRSHSRSP YS SP RVRSRTR
Sbjct: 541 RRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSHSRSHSRSP-YSRSP-RVRSRTR 551

[Close]

BLAST of CmoCh02G005560 vs. TrEMBL
Match: A0A118K5F9_CYNCS (Suppressor of white apricot N-terminal domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012571 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 9.6e-199
Identity = 401/537 (74.67%), Postives = 452/537 (84.17%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAV+LAKRRGDPQQSIQV G+RCRVYRDDGLYQAT
Sbjct: 28  MWHEARRSERKVHDMMDAARKRAQRRAVYLAKRRGDPQQSIQVSGSRCRVYRDDGLYQAT 87

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQD+MIDRFDGRALLDFIR+P SR  R  EK+EEEEELEEFV+F+RYRD
Sbjct: 88  EDQQGLIPWNGKQDIMIDRFDGRALLDFIRDPDSRRFRVIEKTEEEEELEEFVSFERYRD 147

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRG  DE+GLQHVNQEMEAK +A F  DRSQ  Q PA  ++GSYSQVGFSY+ D 
Sbjct: 148 LIKHRRRGCRDEEGLQHVNQEMEAKSAALFGLDRSQTTQAPA--NRGSYSQVGFSYDGDV 207

Query: 181 KEESNSDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKE 240
           KEE N D+DD+  D+E+D+DEDEE FNSDDSNDEGM+++AKEFGVKRYGWLVYMDKKAKE
Sbjct: 208 KEE-NQDSDDD--DEEEDDDEDEEDFNSDDSNDEGMDIIAKEFGVKRYGWLVYMDKKAKE 267

Query: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTY 300
           EE+RQKE++KGDPAIRKLSRKERRKASQ+ERERERE+ARV+G+RVLHHDPYRESRRSPTY
Sbjct: 268 EERRQKEVVKGDPAIRKLSRKERRKASQIERERERESARVSGSRVLHHDPYRESRRSPTY 327

Query: 301 DAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGGPGESKEPRLEGL 360
           +AY RSRRSRSRS+SPS SRRH RGHSDD  RN PR PKIE+ITEFGG  +   P+L G 
Sbjct: 328 EAYSRSRRSRSRSYSPSQSRRHGRGHSDDTQRNNPRAPKIEYITEFGGSTDGGGPKLAGY 387

Query: 361 SPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHF-VSRDQLVWFTCLTPVLSCR 420
           +PP SPPSQ D LNRSEH     C +     YC A F+   +       F  L  +L CR
Sbjct: 388 TPPSSPPSQVDALNRSEH-----CSN-----YCIARFTSLSLLPCAHTAFFPLMLLLFCR 447

Query: 421 PSSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLK-LGEKKE 480
           PSSG+ILEALHIDPASG++LD E++++  KPS  +SS LAKL K S SG   K  GEKKE
Sbjct: 448 PSSGQILEALHIDPASGVSLDGERNAKLSKPSAGSSSGLAKLNKPSGSGSLAKQQGEKKE 507

Query: 481 TPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRS 536
           TPQERLKRIMS+QLNKQIKKDTAAEMAKKREQERQRLEKLAET+RL+ +R RSRSR+
Sbjct: 508 TPQERLKRIMSKQLNKQIKKDTAAEMAKKREQERQRLEKLAETNRLSRYRHRSRSRN 549

[Close]

BLAST of CmoCh02G005560 vs. TrEMBL
Match: A0A067KAA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12394 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 6.0e-193
Identity = 428/600 (71.33%), Postives = 470/600 (78.33%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAV+LAKRRGDPQQSIQV+G+RCR YRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVYLAKRRGDPQQSIQVIGSRCRTYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDV+IDRFDGRALLDFIRE GSR  R  EKSEEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVLIDRFDGRALLDFIREAGSRRFRAPEKSEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSD-RSQPPQPPAAASKGSYSQVGFSYEAD 180
           LIKHRRRGF DE+GLQHV QEMEAK + PF SD  SQ  Q P  +SKGSYSQVGFSY+ D
Sbjct: 121 LIKHRRRGFTDEEGLQHVTQEMEAKTTIPFASDSTSQLAQAP--SSKGSYSQVGFSYDGD 180

Query: 181 GKEESN-SDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKA 240
           GKEES  SD DDN   +EDDEDED+E FNSDDSNDEGM+ +AK+FGVKRYGWLVYMDKKA
Sbjct: 181 GKEESQFSDVDDN---EEDDEDEDDEDFNSDDSNDEGMDTIAKDFGVKRYGWLVYMDKKA 240

Query: 241 KEEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSP 300
           KEEEKRQKE+IKGDPAIRKLSRKERRKASQ+EREREREAAR+TGTRVLHHDPYRE RRSP
Sbjct: 241 KEEEKRQKEMIKGDPAIRKLSRKERRKASQIEREREREAARITGTRVLHHDPYREPRRSP 300

Query: 301 TYDAYPRSRRSRSRSHSPS-HSRRHSR-GHSDDVHRNKPRTPKIEFITEFGGPGESKEPR 360
           TY+AY RSRRSRSRS S S HSRR+ R G SD+VH +KPRTPKIE+ITEFGG G+  EP+
Sbjct: 301 TYEAYSRSRRSRSRSRSYSPHSRRYGRGGRSDEVHHSKPRTPKIEYITEFGGSGDRDEPK 360

Query: 361 LEGLSPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVL 420
           LEG SPP SPPSQ DML+R   S+ H  E                              L
Sbjct: 361 LEGYSPPSSPPSQADMLSRP--SSGHILE-----------------------------AL 420

Query: 421 SCRPSSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEK 480
              P+SG  L+      A    + +  S+ A     S+S  L  L +        + G K
Sbjct: 421 HIDPASGVSLDKEKSTKAVKPAV-STSSALAKLTKASSSRGLGPLKQ--------QPGAK 480

Query: 481 KETPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSY 540
           KETPQERLKRIMS+QLNKQIKKDTAAEMAKKREQE QRLEKLAET+RL+ +RRRSRSRSY
Sbjct: 481 KETPQERLKRIMSKQLNKQIKKDTAAEMAKKREQEHQRLEKLAETNRLSRYRRRSRSRSY 540

Query: 541 SRSPRRRYRRSRSRSRSRGSRRYYSRSRSRSRSHSRSHSRSHSRSPSYSPSPSRVRSRTR 597
           SRSP RRYRRSRS SR   SRRY+SRSRSRSRSHSR+ S SHSRS S S SP RVRSR+R
Sbjct: 541 SRSPPRRYRRSRSPSRG-SSRRYHSRSRSRSRSHSRTRSHSHSRSRSSSRSPRRVRSRSR 554

[Close]

BLAST of CmoCh02G005560 vs. TrEMBL
Match: M5W803_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003826mg PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 3.9e-192
Identity = 423/602 (70.27%), Postives = 479/602 (79.57%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVG+RCR+YRDDGLYQA+
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGSRCRLYRDDGLYQAS 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDV+IDRFDGRALLDFIRE  SRH+R QEKSEEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVLIDRFDGRALLDFIRE--SRHLRAQEKSEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRGF DE+GLQHVN+E+E +V+APF  +RSQ  QP  +A KGSYSQVGFSYE DG
Sbjct: 121 LIKHRRRGFTDEEGLQHVNEEIETRVTAPFAPERSQMQQP--SAVKGSYSQVGFSYEGDG 180

Query: 181 KEESN-SDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAK 240
           KEE+  SD DDN  D+E+DEDED+  FNSDDS+DEGM+ +AKEFG+KRYGWLVYMDKKAK
Sbjct: 181 KEEAQFSDPDDNDEDEEEDEDEDD--FNSDDSSDEGMDKIAKEFGIKRYGWLVYMDKKAK 240

Query: 241 EEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPT 300
           EEEKRQKE+IKGDPAIRK+SRKERRKASQ+EREREREAARVTGT+VLHHDPYRESRRSPT
Sbjct: 241 EEEKRQKEVIKGDPAIRKMSRKERRKASQIEREREREAARVTGTQVLHHDPYRESRRSPT 300

Query: 301 YDAYPRSRRSRSRSHSPSHSRRHSRG-HSDDVHRNKPRTPKIEFITEFGGPGESKEPRLE 360
           Y+AYPRSRRSRSRS+SPS+SRR+ RG HSD+ HR+KP T KIE+ITEFGG G+  E +  
Sbjct: 301 YEAYPRSRRSRSRSYSPSYSRRYPRGRHSDEAHRSKPATSKIEYITEFGGSGDKDESKRA 360

Query: 361 GLSPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVLSC 420
           G SPP SPPSQ D+LNR            L+ L+   A    + +D+             
Sbjct: 361 GFSPPSSPPSQADVLNRPSTGLI------LEALHVDPASGASLEKDK------------- 420

Query: 421 RPSSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLG--EK 480
                ++++     PAS        SS   K +  ++S           GGPLK    EK
Sbjct: 421 ---GTKVVK----PPAS-------TSSALAKLTKGSTS-----------GGPLKQQPVEK 480

Query: 481 KETPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSY 540
           KETPQERLKRIMS+QLNKQIKKDTAAE+AKKREQERQRLEKLAETSRL+  RRRSRSRSY
Sbjct: 481 KETPQERLKRIMSRQLNKQIKKDTAAEIAKKREQERQRLEKLAETSRLSRSRRRSRSRSY 540

Query: 541 SRSPRRRYRRSRSRSRSRGSRRYYSRSRSRSRSHS--RSHSRSHSRSPSYSPSPSRVRSR 597
           SRSP RRYR SRSRSRS+ SRR+YSRSRSRSRS S  R+HSR++SRSP       RVRSR
Sbjct: 541 SRSPPRRYRDSRSRSRSKSSRRHYSRSRSRSRSRSRTRNHSRTYSRSP-------RVRSR 545

[Close]

BLAST of CmoCh02G005560 vs. TrEMBL
Match: A0A151TIG3_CAJCA (Splicing factor, arginine/serine-rich 16 OS=Cajanus cajan GN=KK1_013158 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 6.6e-192
Identity = 420/599 (70.12%), Postives = 474/599 (79.13%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRAV+LAKRRGDPQQSIQ++G RCR YRDD LYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAVYLAKRRGDPQQSIQLLGFRCRTYRDDALYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           QDQQGLIPWNGKQDV+IDRFDGRALLDFIR+  S H R  EKSEEEEELEEFVNF+RYRD
Sbjct: 61  QDQQGLIPWNGKQDVLIDRFDGRALLDFIRD--SSHRRVPEKSEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRGF DE+ LQHVNQEMEAK +APF+SDRS   QP  AASKGSYSQVGFSY+ +G
Sbjct: 121 LIKHRRRGFTDEEALQHVNQEMEAKAAAPFMSDRSNSSQP--AASKGSYSQVGFSYDGNG 180

Query: 181 KEESNSDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKE 240
           KEE++   DD+  ++ED++DED+E FNSDDSNDEGME++AKE+GVKRYGWLVYMDKKAKE
Sbjct: 181 KEEAHISDDDDNDNEEDEDDEDDEDFNSDDSNDEGMEIIAKEYGVKRYGWLVYMDKKAKE 240

Query: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTY 300
           EEKRQKE+IKGDPAIRKLSRKERRKASQ+EREREREA R++G+RVLHHDPYRESR+SPTY
Sbjct: 241 EEKRQKELIKGDPAIRKLSRKERRKASQIEREREREATRISGSRVLHHDPYRESRQSPTY 300

Query: 301 DAYPRSR--RSRSRSHSPSHSRRHSR-GHSDDVHRNKPRTPKIEFITEFGGPGESKEPRL 360
           +AY RSR  RSRSRS+SPSHSRR+SR GHSDD+HR+KPRTPKIE+ITEFGG G + EPR 
Sbjct: 301 EAYSRSRRSRSRSRSYSPSHSRRYSRSGHSDDIHRSKPRTPKIEYITEFGGSGAADEPRP 360

Query: 361 EGLSPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVLS 420
           EG SPP+SP SQ DMLNR            L+ L+   A    V +D+       T VL 
Sbjct: 361 EGFSPPRSPTSQVDMLNRPSSGCI------LEALHVDPASGVSVDKDK------GTKVLK 420

Query: 421 CRPSSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKK 480
              S+   L  L     SG  L +++                              GEKK
Sbjct: 421 PSVSASSALAKLKAG-GSGGPLKHQQ------------------------------GEKK 480

Query: 481 ETPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSYS 540
           ETPQERLKRIM++QLNKQIKKDTAAE AKKREQERQRLEKLAETSRL+ +RRRSRSRS+S
Sbjct: 481 ETPQERLKRIMNKQLNKQIKKDTAAEQAKKREQERQRLEKLAETSRLSRYRRRSRSRSFS 540

Query: 541 RSPRRRYRRSRSRSRSRGSRRYYSRSRSRSRSHSRSHSRSHSRSPSYSPSPSRVRSRTR 597
           RSP RRYRRSRS SRSRGSRRYY  S SRSRS SR+ SRS SRSP YS SP R+R+R+R
Sbjct: 541 RSPPRRYRRSRSPSRSRGSRRYY--SSSRSRSPSRTRSRSRSRSP-YSRSP-RIRNRSR 548

[Close]

BLAST of CmoCh02G005560 vs. TAIR10
Match: AT4G36980.4 (AT4G36980.4 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 604.7 bits (1558), Expect = 6.2e-173
Identity = 385/606 (63.53%), Postives = 464/606 (76.57%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDF+RE GSR +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRGF+DE+GLQHV+QE+EAK++APF+  R+QP QPPA  +KG+YSQVGFSY  +G
Sbjct: 121 LIKHRRRGFSDEEGLQHVHQELEAKLAAPFLGTRTQPAQPPA--NKGTYSQVGFSYAGNG 180

Query: 181 KEESNSDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKE 240
           K+ S    +D+  DDEDDEDE+EE F+S+DS+DEGME +AK+FG+KRYGWLVYMDKKAKE
Sbjct: 181 KDNSLDADEDDVDDDEDDEDEEEE-FDSNDSDDEGMETIAKQFGIKRYGWLVYMDKKAKE 240

Query: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTY 300
           EEKRQKE+IKGDP+I+KLSRKERRK S++ER+RERE +R  G +++HHDPYRESRRSPTY
Sbjct: 241 EEKRQKELIKGDPSIKKLSRKERRKVSRIERDRERETSRSVGRQIIHHDPYRESRRSPTY 300

Query: 301 DAYPRSR--RSRSRSHSPSHSRRHSRG-HSDDVHRNKPRTPKIEFITEF-GGPGESKEPR 360
           +AYPRSR  RSRSRS+SPS+SRR+ RG HSD++ +     PKIE+ITEF GG G+ + P+
Sbjct: 301 EAYPRSRRSRSRSRSYSPSYSRRNGRGDHSDEISK-----PKIEYITEFGGGSGDMRSPK 360

Query: 361 LEGLSPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVL 420
            EG SPP+SPPSQ D+L+R            L+ L+   A    + +D++          
Sbjct: 361 FEGYSPPRSPPSQSDLLSRPSPGRI------LEALHVDPASDISLEKDKVA--------- 420

Query: 421 SCRPSSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEK 480
                           PA        KS+ +   +++  S +A  + +  S       EK
Sbjct: 421 ---------------KPA--------KSTVSTSTALAKLSKVAGTSSSKQS-----QAEK 480

Query: 481 KETPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSY 540
           KETPQERLKRIM++QL KQIKKD+A E AKKREQERQRLEKLAETSRL+ +R+RSRSRS 
Sbjct: 481 KETPQERLKRIMNKQLTKQIKKDSATETAKKREQERQRLEKLAETSRLSRNRQRSRSRSI 540

Query: 541 SRS--PRRRYRRSRSR--SRSRGSRRYYSRSRSR--SRSHSRSHSRSHSRSPSYSPSPSR 597
           SRS  PR R+RRSRSR  SRSR SRR+ SRSRSR  SRS SRS  RS  RSPSYS SP R
Sbjct: 541 SRSPPPRLRHRRSRSRSGSRSRRSRRHSSRSRSRSPSRSLSRSPKRSRRRSPSYSRSPRR 555

[Close]

BLAST of CmoCh02G005560 vs. NCBI nr
Match: gi|778669834|ref|XP_004149706.2| (PREDICTED: CLK4-associating serine/arginine rich protein [Cucumis sativus])

HSP 1 Score: 860.1 bits (2221), Expect = 2.3e-246
Identity = 508/598 (84.95%), Postives = 522/598 (87.29%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRT EKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTHEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRGFNDEDGLQHVNQEMEAK+SAPFVSDRSQ PQPP+A SKGSYSQVGFSYEADG
Sbjct: 121 LIKHRRRGFNDEDGLQHVNQEMEAKMSAPFVSDRSQQPQPPSA-SKGSYSQVGFSYEADG 180

Query: 181 KEESNSDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKE 240
           KEESNSDADDNASDDEDDED++ E F+SDDSNDEGMEV+AKEFGVKRYGWLVYMDKKAKE
Sbjct: 181 KEESNSDADDNASDDEDDEDDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKE 240

Query: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTY 300
           EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAAR+TGTRVLHHDPYRESRRSPTY
Sbjct: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTY 300

Query: 301 DAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGGPGESKEPRLEGL 360
           DAYPRSRRSRSRSHSPSHSR HS GH DDVHR+KP+TPKIEFITEFGG GES        
Sbjct: 301 DAYPRSRRSRSRSHSPSHSRHHSHGHFDDVHRSKPKTPKIEFITEFGGSGES-------- 360

Query: 361 SPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVLSCRP 420
                                   E RL+ L    +                 P +  RP
Sbjct: 361 -----------------------KEPRLEGLSPPQSPPS-------------QPDMINRP 420

Query: 421 SSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP 480
           SSGRILEALHIDPASG+TLD EKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP
Sbjct: 421 SSGRILEALHIDPASGVTLDKEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP 480

Query: 481 QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSYSRSP 540
           QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNS R RSRSRSYSRSP
Sbjct: 481 QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSP 540

Query: 541 RRRYR--RSRSRSRSRGSRRYYSRSRSRSRSHSRSHSRSHSRSPSYSPSPSRVRSRTR 597
           RRRYR  RSRSRSRSRGSRRYYSRSRSRSRS SRSHSRSHSRSP YS SP RVRSRTR
Sbjct: 541 RRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSHSRSHSRSP-YSRSP-RVRSRTR 551

[Close]

BLAST of CmoCh02G005560 vs. NCBI nr
Match: gi|659115888|ref|XP_008457790.1| (PREDICTED: CLK4-associating serine/arginine rich protein isoform X1 [Cucumis melo])

HSP 1 Score: 853.2 bits (2203), Expect = 2.8e-244
Identity = 508/604 (84.11%), Postives = 522/604 (86.42%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQ PQPP+A SKGSYSQVGFSYEADG
Sbjct: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQQPQPPSA-SKGSYSQVGFSYEADG 180

Query: 181 KEESNSDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKE 240
           KEESNSDADDNASDDEDDED++ E F+SDDSNDEGMEV+AKEFGVKRYGWLVYMDKKAKE
Sbjct: 181 KEESNSDADDNASDDEDDEDDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKE 240

Query: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTY 300
           EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAAR+TGTRVLHHDPYRESRRSPTY
Sbjct: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTY 300

Query: 301 DAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGGPGESKEPRLEGL 360
           DAYPRSRRSRSRS SPSHSR HS GH DDVHR+KPRTPKIEFITEFGG GES        
Sbjct: 301 DAYPRSRRSRSRSRSPSHSRHHSHGHFDDVHRSKPRTPKIEFITEFGGSGES-------- 360

Query: 361 SPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVLSCRP 420
                                   E RL+ L    +                 P +  RP
Sbjct: 361 -----------------------KEPRLEGLSPPQSPPS-------------QPDMINRP 420

Query: 421 SSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP 480
           SSGRILEALH+DPASG+TLD EKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP
Sbjct: 421 SSGRILEALHVDPASGVTLDKEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETP 480

Query: 481 QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSYSRSP 540
           QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNS R RSRSRSYSRSP
Sbjct: 481 QERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSP 540

Query: 541 RRRYR--RSRSRSRSRGSRRYYSRSRSR------SRSHSRSHSRSHSRSPSYSPSPSRVR 597
           RRRYR  RSRSRSRSRGSRRYYSRSRSR      SRS SRSHSRSHSRSP YS SP RVR
Sbjct: 541 RRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSQSRSRSRSHSRSHSRSP-YSRSP-RVR 557

[Close]

BLAST of CmoCh02G005560 vs. NCBI nr
Match: gi|659115890|ref|XP_008457791.1| (PREDICTED: CLK4-associating serine/arginine rich protein isoform X2 [Cucumis melo])

HSP 1 Score: 704.5 bits (1817), Expect = 1.6e-199
Identity = 434/529 (82.04%), Postives = 447/529 (84.50%), Query Frame = 1


Query: 76  MIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRDLIKHRRRGFNDEDGL 135
           MIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRDLIKHRRRGFNDEDGL
Sbjct: 1   MIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRDLIKHRRRGFNDEDGL 60

Query: 136 QHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADGKEESNSDADDNASDD 195
           QHVNQEMEAKVSAPFVSDRSQ PQPP+A SKGSYSQVGFSYEADGKEESNSDADDNASDD
Sbjct: 61  QHVNQEMEAKVSAPFVSDRSQQPQPPSA-SKGSYSQVGFSYEADGKEESNSDADDNASDD 120

Query: 196 EDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAI 255
           EDDED++ E F+SDDSNDEGMEV+AKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAI
Sbjct: 121 EDDEDDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAI 180

Query: 256 RKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHS 315
           RKLSRKERRKASQMEREREREAAR+TGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS S
Sbjct: 181 RKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSRS 240

Query: 316 PSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGGPGESKEPRLEGLSPPQSPPSQPDMLNR 375
           PSHSR HS GH DDVHR+KPRTPKIEFITEFGG GES                       
Sbjct: 241 PSHSRHHSHGHFDDVHRSKPRTPKIEFITEFGGSGES----------------------- 300

Query: 376 SEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVLSCRPSSGRILEALHIDPAS 435
                    E RL+ L    +                 P +  RPSSGRILEALH+DPAS
Sbjct: 301 --------KEPRLEGLSPPQSPPS-------------QPDMINRPSSGRILEALHVDPAS 360

Query: 436 GMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETPQERLKRIMSQQLNKQ 495
           G+TLD EKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETPQERLKRIMSQQLNKQ
Sbjct: 361 GVTLDKEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLGEKKETPQERLKRIMSQQLNKQ 420

Query: 496 IKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSYSRSPRRRYR--RSRSRSRS 555
           IKKDTAAEMAKKREQERQRLEKLAETSRLNS R RSRSRSYSRSPRRRYR  RSRSRSRS
Sbjct: 421 IKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRS 480

Query: 556 RGSRRYYSRSRSR------SRSHSRSHSRSHSRSPSYSPSPSRVRSRTR 597
           RGSRRYYSRSRSR      SRS SRSHSRSHSRSP YS SP RVR+RTR
Sbjct: 481 RGSRRYYSRSRSRSRSRSQSRSRSRSHSRSHSRSP-YSRSP-RVRTRTR 482

[Close]

BLAST of CmoCh02G005560 vs. NCBI nr
Match: gi|976925131|gb|KVI09045.1| (Suppressor of white apricot N-terminal domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 701.4 bits (1809), Expect = 1.4e-198
Identity = 401/537 (74.67%), Postives = 452/537 (84.17%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAV+LAKRRGDPQQSIQV G+RCRVYRDDGLYQAT
Sbjct: 28  MWHEARRSERKVHDMMDAARKRAQRRAVYLAKRRGDPQQSIQVSGSRCRVYRDDGLYQAT 87

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQD+MIDRFDGRALLDFIR+P SR  R  EK+EEEEELEEFV+F+RYRD
Sbjct: 88  EDQQGLIPWNGKQDIMIDRFDGRALLDFIRDPDSRRFRVIEKTEEEEELEEFVSFERYRD 147

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRG  DE+GLQHVNQEMEAK +A F  DRSQ  Q PA  ++GSYSQVGFSY+ D 
Sbjct: 148 LIKHRRRGCRDEEGLQHVNQEMEAKSAALFGLDRSQTTQAPA--NRGSYSQVGFSYDGDV 207

Query: 181 KEESNSDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKE 240
           KEE N D+DD+  D+E+D+DEDEE FNSDDSNDEGM+++AKEFGVKRYGWLVYMDKKAKE
Sbjct: 208 KEE-NQDSDDD--DEEEDDDEDEEDFNSDDSNDEGMDIIAKEFGVKRYGWLVYMDKKAKE 267

Query: 241 EEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTY 300
           EE+RQKE++KGDPAIRKLSRKERRKASQ+ERERERE+ARV+G+RVLHHDPYRESRRSPTY
Sbjct: 268 EERRQKEVVKGDPAIRKLSRKERRKASQIERERERESARVSGSRVLHHDPYRESRRSPTY 327

Query: 301 DAYPRSRRSRSRSHSPSHSRRHSRGHSDDVHRNKPRTPKIEFITEFGGPGESKEPRLEGL 360
           +AY RSRRSRSRS+SPS SRRH RGHSDD  RN PR PKIE+ITEFGG  +   P+L G 
Sbjct: 328 EAYSRSRRSRSRSYSPSQSRRHGRGHSDDTQRNNPRAPKIEYITEFGGSTDGGGPKLAGY 387

Query: 361 SPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHF-VSRDQLVWFTCLTPVLSCR 420
           +PP SPPSQ D LNRSEH     C +     YC A F+   +       F  L  +L CR
Sbjct: 388 TPPSSPPSQVDALNRSEH-----CSN-----YCIARFTSLSLLPCAHTAFFPLMLLLFCR 447

Query: 421 PSSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLK-LGEKKE 480
           PSSG+ILEALHIDPASG++LD E++++  KPS  +SS LAKL K S SG   K  GEKKE
Sbjct: 448 PSSGQILEALHIDPASGVSLDGERNAKLSKPSAGSSSGLAKLNKPSGSGSLAKQQGEKKE 507

Query: 481 TPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRS 536
           TPQERLKRIMS+QLNKQIKKDTAAEMAKKREQERQRLEKLAET+RL+ +R RSRSR+
Sbjct: 508 TPQERLKRIMSKQLNKQIKKDTAAEMAKKREQERQRLEKLAETNRLSRYRHRSRSRN 549

[Close]

BLAST of CmoCh02G005560 vs. NCBI nr
Match: gi|645272566|ref|XP_008241458.1| (PREDICTED: CLK4-associating serine/arginine rich protein isoform X1 [Prunus mume])

HSP 1 Score: 689.1 bits (1777), Expect = 7.1e-195
Identity = 427/600 (71.17%), Postives = 480/600 (80.00%), Query Frame = 1


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVG+RCR+YRDDGLYQA+
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGSRCRLYRDDGLYQAS 60

Query: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDV+IDRFDGRALLDFIRE  SRH+R QEKSEEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVLIDRFDGRALLDFIRE--SRHLRAQEKSEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGFNDEDGLQHVNQEMEAKVSAPFVSDRSQPPQPPAAASKGSYSQVGFSYEADG 180
           LIKHRRRGF DE+GLQHVN+E+E +V+APF  +RSQ  QP  +A KGSYSQVGFSYE DG
Sbjct: 121 LIKHRRRGFTDEEGLQHVNEEIETRVTAPFAPERSQMQQP--SAVKGSYSQVGFSYEGDG 180

Query: 181 KEESN-SDADDNASDDEDDEDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAK 240
           KEE+  SDADDN  DDE+DEDED+  FNSDDS DEGM+ +AKEFG+KRYGWLVYMDKKAK
Sbjct: 181 KEEAQFSDADDNDEDDEEDEDEDD--FNSDDSGDEGMDKIAKEFGIKRYGWLVYMDKKAK 240

Query: 241 EEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPT 300
           EEEKRQKE+IKGDPAIRK+SRKERRKASQ+ERER REAARVTGT+VLHHDPYRESRRSPT
Sbjct: 241 EEEKRQKEVIKGDPAIRKMSRKERRKASQIERERAREAARVTGTQVLHHDPYRESRRSPT 300

Query: 301 YDAYPRSRRSRSRSHSPSHSRRHSRG-HSDDVHRNKPRTPKIEFITEFGGPGESKEPRLE 360
           Y+AYPRSRRSRSRS+SPS SRR+ RG HSD+ HR+KP T KIE+ITEFGG G+  E +  
Sbjct: 301 YEAYPRSRRSRSRSYSPSFSRRYPRGRHSDEAHRSKPATSKIEYITEFGGSGDKDESKRA 360

Query: 361 GLSPPQSPPSQPDMLNRSEHSTFHSCEDRLDNLYCAAAFSHFVSRDQLVWFTCLTPVLSC 420
           G SPP SPPSQ D+LNR            L+ L+   A    + +D+             
Sbjct: 361 GFSPPSSPPSQADVLNRPSTGLI------LEALHVDPASGASLEKDK------------- 420

Query: 421 RPSSGRILEALHIDPASGMTLDNEKSSRAVKPSVSTSSALAKLTKASSSGGPLKLG--EK 480
                ++++     PAS        SS   K +  ++S           GGPLK    EK
Sbjct: 421 ---GTKVVK----PPAS-------TSSALAKLTKGSTS-----------GGPLKQQPVEK 480

Query: 481 KETPQERLKRIMSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSHRRRSRSRSY 540
           KETPQERLKRIMS+QLNKQIKKDTAAE+AKKREQERQRLEKLAETSRL+  RRRSRSRSY
Sbjct: 481 KETPQERLKRIMSRQLNKQIKKDTAAEIAKKREQERQRLEKLAETSRLSRSRRRSRSRSY 540

Query: 541 SRSPRRRYRRSRSRSRSRGSRRYYSRSRSRSRSHSRSHSRSHSRSPSYSPSPSRVRSRTR 597
           SRSP RRYR SRSRSRS+ SRR+YSRSRSRSRSHSRS SR+ +RS +YS SP RVRSRTR
Sbjct: 541 SRSPPRRYRDSRSRSRSKSSRRHYSRSRSRSRSHSRSRSRTRNRSRTYSRSP-RVRSRTR 549

The following BLAST results are available for this feature:

BLAST of CmoCh02G005560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLASR_MOUSE	9.7e-19	31.68	CLK4-associating serine/arginine rich protein OS=Mus musculus GN=Clasrp PE=1 SV=...	[more]
CLASR_RAT	9.7e-19	31.68	CLK4-associating serine/arginine rich protein OS=Rattus norvegicus GN=Clasrp PE=...	[more]
CLASR_HUMAN	1.7e-18	32.51	CLK4-associating serine/arginine rich protein OS=Homo sapiens GN=CLASRP PE=1 SV=...	[more]
CLASR_BOVIN	3.7e-18	32.23	CLK4-associating serine/arginine rich protein OS=Bos taurus GN=CLASRP PE=2 SV=1	[more]

BLAST of CmoCh02G005560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJB3_CUCSA	1.6e-246	84.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277020 PE=4 SV=1	[more]
A0A118K5F9_CYNCS	9.6e-199	74.67	Suppressor of white apricot N-terminal domain-containing protein OS=Cynara cardu...	[more]
A0A067KAA1_JATCU	6.0e-193	71.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12394 PE=4 SV=1	[more]
M5W803_PRUPE	3.9e-192	70.27	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003826mg PE=4 SV=1	[more]
A0A151TIG3_CAJCA	6.6e-192	70.12	Splicing factor, arginine/serine-rich 16 OS=Cajanus cajan GN=KK1_013158 PE=4 SV=...	[more]

BLAST of CmoCh02G005560 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36980.4	6.2e-173	63.53	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CmoCh02G005560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669834\|ref\|XP_004149706.2\|	2.3e-246	84.95	PREDICTED: CLK4-associating serine/arginine rich protein [Cucumis sativus]	[more]
gi\|659115888\|ref\|XP_008457790.1\|	2.8e-244	84.11	PREDICTED: CLK4-associating serine/arginine rich protein isoform X1 [Cucumis mel...	[more]
gi\|659115890\|ref\|XP_008457791.1\|	1.6e-199	82.04	PREDICTED: CLK4-associating serine/arginine rich protein isoform X2 [Cucumis mel...	[more]
gi\|976925131\|gb\|KVI09045.1\|	1.4e-198	74.67	Suppressor of white apricot N-terminal domain-containing protein [Cynara cardunc...	[more]
gi\|645272566\|ref\|XP_008241458.1\|	7.1e-195	71.17	PREDICTED: CLK4-associating serine/arginine rich protein isoform X1 [Prunus mume...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019147	SWAP_N_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G005560.1	CmoCh02G005560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019147	Suppressor of white apricot N-terminal domain	PFAM	PF09750	DRY_EERY	coord: 41..178 score: 6.9
IPR019147	Suppressor of white apricot N-terminal domain	SMART	SM01141	DRY_EERY_2	coord: 39..180 score: 1.9
None	No IPR available	unknown	Coil	Coil	coord: 255..279 score: -coord: 498..525 scor
None	No IPR available	PANTHER	PTHR13161	SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT	coord: 419..597 score: 1.5E-184coord: 2..374 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G005560	Cucsa.367030	Cucumber (Gy14) v1	cgycmoB1019
CmoCh02G005560	CmaCh02G005440	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G005560	Cla020211	Watermelon (97103) v1	cmowmB598
CmoCh02G005560	ClCG02G012530	Watermelon (Charleston Gray)	cmowcgB549
CmoCh02G005560	Lsi10G005450	Bottle gourd (USVL1VR-Ls)	cmolsiB539
CmoCh02G005560	Cp4.1LG05g11440	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G005560	CsaV3_2G016660	Cucumber (Chinese Long) v3	cmocucB0693
CmoCh02G005560	Cla97C02G038240	Watermelon (97103) v2	cmowmbB613
CmoCh02G005560	Bhi10G001713	Wax gourd	cmowgoB0744
CmoCh02G005560	CsGy2G014020	Cucumber (Gy14) v2	cgybcmoB226
CmoCh02G005560	Carg11619	Silver-seed gourd	carcmoB1422

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G005560	Cucumber (Gy14) v1	cgycmoB1020
CmoCh02G005560	Wild cucumber (PI 183967)	cmocpiB576
CmoCh02G005560	Cucumber (Chinese Long) v2	cmocuB571
CmoCh02G005560	Melon (DHL92) v3.5.1	cmomeB533
CmoCh02G005560	Melon (DHL92) v3.5.1	cmomeB544
CmoCh02G005560	Melon (DHL92) v3.5.1	cmomeB547
CmoCh02G005560	Watermelon (Charleston Gray)	cmowcgB532
CmoCh02G005560	Watermelon (97103) v1	cmowmB581
CmoCh02G005560	Bottle gourd (USVL1VR-Ls)	cmolsiB530
CmoCh02G005560	Cucumber (Gy14) v2	cgybcmoB217
CmoCh02G005560	Melon (DHL92) v3.6.1	cmomedB611
CmoCh02G005560	Melon (DHL92) v3.6.1	cmomedB622
CmoCh02G005560	Melon (DHL92) v3.6.1	cmomedB625
CmoCh02G005560	Cucumber (Chinese Long) v3	cmocucB0682
CmoCh02G005560	Cucumber (Chinese Long) v3	cmocucB0685
CmoCh02G005560	Watermelon (97103) v2	cmowmbB594