CmoCh02G005230 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTTGCTGCTCATTTCTGGCTCTTCTCTCTCTCTTTCAGGTTTTTTTTCTCTCTCTATCTCTAATTTTCTTAAGATACCAACACTTAACTGATTCAAAAGTGTTCGTATGAAAAGTAGAGTTGAAACTGAGATACCAACACTTAACTGATTCAAGAGTGTTCATATGACTCAGTAAATTGACCAACCTGAATTTTTTTTCGTTTGAATTAGGTTAAATTTTTTAAAAAGTAGACTATTAACATTTTTTTTTATTGGGTTAGCCTAATCGTTACACCCAAAATCATATTTTACTTTAAAAAAATAATTAATATTTGTAATATCAACTTGAAAAGGTTTGATATTTGAACTTCATCCAATTTTAGTTATTAATTTAACATGCATGAATGATTTTTTTATTTTTTTTTAAGATAGAACAATCTGAAAATCTAACCCAACTCAGTGTATACTCCTAAGACTAACTTTCAACCCATTTGTCAGTGTAATTTTTCTTTCTACTTGATTTAAATCATTAATTTCTTTTAGATCTGGTCGGTAAGAAATTGAACCATCAACTTTTTTTAAATTGGAGTCTATGTTTTATTTATTTTAAAACAAAAATATATTTAAAATAAAATGATATATCTTTATTTTATTATTATGTTTTTATTTATTATTATTTGGCCAACACAATTATGAAGTATTTATGATGAAGATATTTTTGTACGAGAAATTGTAATATTGTGGACCAAAAATAATAATAAATAAAAAAAAACAGGCACTGTCGCTAATGATATCATAACAGCCATCCTTCTGTTTTATAAACACTCACTGTTTCTCTTTTATATTTCTTCCATTGTTAGGCAAAAATCCAAACCTCTCCTTCTTCCATCATCCATTTCTAACACCCAACACAAAGCTCCAAAATTGGCACATCAATGGCGAAGCTGGCAGAACAGGAATCTGAGAGCAAGGAGAACATGAAGAACGCCATGTTAAAGCACGAGCAGACATTTCGTCATCAAGTACGTTTCTTTATCCATTTTCTCATCTGGGTTTGTGTTTTTTTACACTAAAAATCTTGTTTTCAGGTGTATGAACTCCACAGATTGTACAGAATTCAGAAGCTTTTGATGAAGAACATAACAGAAAACAGAGGAAAAACAGAGAGATGGGAAGTGAAAAATGAAGATGAAGATGAAGAAGATGAAAAAGAGAGTGATTTTATTGAAGAAAGTGAGGTTGAATTGACATTGGGACCTTCAAATTACAGCAATCAAGTTGGTGGAGGAAGGAGAAGAAGAAGAAAGAGCTGCTTCTCTTCTTCTTCTTCGTCTTCAACCACTGGCTCTGCTCAAAAAAGTCGAAGCTTTTACAGACACGGTGAGCTTGTTGGTAGCTCTGAAATGGGGTTTGTGGGGTTTCTTGAAGATGAGATGAGGCTTTCACAGCACCATCCAAATCCATGGCTTTGTCAACCTCTAACCCTTAATCTCACTTCATAAACACTTTGATTCTTTTATGTTCTGCTTATTTTTTAGTTTTCTTGGCTGATTGGGCGTCTAATCTTCTCTTTGTACAAGTTTATAACCAAGTTAGTATAATTATCATCATTGCGCGCCTTTTAGGTCTTGTTTGATAATCATTTGTTGGGTCGTTAACTTTTACGAGTCGTTCAACCCGAG CTCTCTCTTGCTGCTCATTTCTGGCTCTTCTCTCTCTCTTTCAGGCAAAAATCCAAACCTCTCCTTCTTCCATCATCCATTTCTAACACCCAACACAAAGCTCCAAAATTGGCACATCAATGGCGAAGCTGGCAGAACAGGAATCTGAGAGCAAGGAGAACATGAAGAACGCCATGTTAAAGCACGAGCAGACATTTCGTCATCAAGTGTATGAACTCCACAGATTGTACAGAATTCAGAAGCTTTTGATGAAGAACATAACAGAAAACAGAGGAAAAACAGAGAGATGGGAAGTGAAAAATGAAGATGAAGATGAAGAAGATGAAAAAGAGAGTGATTTTATTGAAGAAAGTGAGGTTGAATTGACATTGGGACCTTCAAATTACAGCAATCAAGTTGGTGGAGGAAGGAGAAGAAGAAGAAAGAGCTGCTTCTCTTCTTCTTCTTCGTCTTCAACCACTGGCTCTGCTCAAAAAAGTCGAAGCTTTTACAGACACGGTGAGCTTGTTGGTAGCTCTGAAATGGGGTTTGTGGGGTTTCTTGAAGATGAGATGAGGCTTTCACAGCACCATCCAAATCCATGGCTTTGTCAACCTCTAACCCTTAATCTCACTTCATAAACACTTTGATTCTTTTATGTTCTGCTTATTTTTTAGTTTTCTTGGCTGATTGGGCGTCTAATCTTCTCTTTGTACAAGTTTATAACCAAGTTAGTATAATTATCATCATTGCGCGCCTTTTAGGTCTTGTTTGATAATCATTTGTTGGGTCGTTAACTTTTACGAGTCGTTCAACCCGAG ATGGCGAAGCTGGCAGAACAGGAATCTGAGAGCAAGGAGAACATGAAGAACGCCATGTTAAAGCACGAGCAGACATTTCGTCATCAAGTGTATGAACTCCACAGATTGTACAGAATTCAGAAGCTTTTGATGAAGAACATAACAGAAAACAGAGGAAAAACAGAGAGATGGGAAGTGAAAAATGAAGATGAAGATGAAGAAGATGAAAAAGAGAGTGATTTTATTGAAGAAAGTGAGGTTGAATTGACATTGGGACCTTCAAATTACAGCAATCAAGTTGGTGGAGGAAGGAGAAGAAGAAGAAAGAGCTGCTTCTCTTCTTCTTCTTCGTCTTCAACCACTGGCTCTGCTCAAAAAAGTCGAAGCTTTTACAGACACGGTGAGCTTGTTGGTAGCTCTGAAATGGGGTTTGTGGGGTTTCTTGAAGATGAGATGAGGCTTTCACAGCACCATCCAAATCCATGGCTTTGTCAACCTCTAACCCTTAATCTCACTTCATAA
BLAST of CmoCh02G005230 vs. TrEMBL
Match: A0A0A0LJL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277640 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.2e-41 Identity = 110/181 (60.77%), Postives = 130/181 (71.82%), Query Frame = 1
BLAST of CmoCh02G005230 vs. TrEMBL
Match: W9QC87_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005918 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.0e-18 Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 1
BLAST of CmoCh02G005230 vs. TrEMBL
Match: A0A151TWT2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_010737 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 7.9e-15 Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 1
BLAST of CmoCh02G005230 vs. TrEMBL
Match: A0A067KAK8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12514 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14 Identity = 78/211 (36.97%), Postives = 106/211 (50.24%), Query Frame = 1
BLAST of CmoCh02G005230 vs. TrEMBL
Match: A0A067GJW5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028669mg PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.1e-14 Identity = 68/197 (34.52%), Postives = 98/197 (49.75%), Query Frame = 1
BLAST of CmoCh02G005230 vs. TAIR10
Match: AT5G67390.1 (AT5G67390.1 unknown protein) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 62/172 (36.05%), Postives = 87/172 (50.58%), Query Frame = 1
BLAST of CmoCh02G005230 vs. NCBI nr
Match: gi|659115849|ref|XP_008457768.1| (PREDICTED: uncharacterized protein LOC103497380 [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 6.3e-42 Identity = 111/181 (61.33%), Postives = 131/181 (72.38%), Query Frame = 1
BLAST of CmoCh02G005230 vs. NCBI nr
Match: gi|778669893|ref|XP_011649318.1| (PREDICTED: uncharacterized protein LOC105434616 [Cucumis sativus]) HSP 1 Score: 176.8 bits (447), Expect = 3.2e-41 Identity = 110/181 (60.77%), Postives = 130/181 (71.82%), Query Frame = 1
BLAST of CmoCh02G005230 vs. NCBI nr
Match: gi|703063423|ref|XP_010086958.1| (hypothetical protein L484_005918 [Morus notabilis]) HSP 1 Score: 100.5 bits (249), Expect = 2.9e-18 Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 1
BLAST of CmoCh02G005230 vs. NCBI nr
Match: gi|1009145433|ref|XP_015890334.1| (PREDICTED: uncharacterized protein LOC107424944 [Ziziphus jujuba]) HSP 1 Score: 89.7 bits (221), Expect = 5.1e-15 Identity = 78/216 (36.11%), Postives = 111/216 (51.39%), Query Frame = 1
BLAST of CmoCh02G005230 vs. NCBI nr
Match: gi|1012360294|gb|KYP71478.1| (hypothetical protein KK1_010737 [Cajanus cajan]) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14 Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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