CmoCh02G003740 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	ATP binding microtubule motor family protein
Location	Cmo_Chr02 : 1907847 .. 1910098 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATGTTCTTGTGCTTTTTTCTCCTCCGTGAAGTTGATCTCCTTGGTGTTTTCTTGTTGTAGACAGGGTTTTTGGCTCCCAGACTTCTACTCCAGAGGTGTATGAAGTAGCGGCCCAGCCTGTCATCAAAGCTGCGATGGAAGGTGTCAATGGTCGGTGACTTATTCTCTTCAAGATCACAAATTACTAAATCAATCATTCAGTTTGAGTGCAACAAGAACAGTTAGAATTTACTGGAAACGTGCATCGGTTATTCTAGAGCATTATGCCATCCAATTTTTATTGCTGCAGGACTCGGACATTGAACGTCGTTTATTTTATCTATTTCTTTATTTATTTTTGTATACACTAGGTTTCCGATTTCACTCATAATATTATTACTAAGTTTGCGACAATGCAGGAACTGTATTTGCTTACGGTGTCACAAGCAGTGGGAAGACACACACTATGCATGTAAGTTCGATTCATCTAACAATTCTATTTCTGTTCTTTTTGTTTAAAATTAAATTTGTTAAGAATTTTAAAATTACGAGTTAACGTCTTTGATTTGTCCCTTCATTCCTGAAATTATATTATTTGATTGAGCCATTGACAAAAGGTTAGAGGTATAGTTGATTGGCTCAGTCTAACAAAGTGAAGATTGCCAATTACCGGCCGCTCTGTGCTGAATGAATTATACGAGCATTGCTAATGGGTGATATTGTGTTTTAGTTCTCTGTAGTTTGTCATTTCCTTGTTGAGGCCTCTTGATTACCGATTTATTTCTACTTTTTTTGTTGCTTTTATTCTTTAATAACAAAATTGGTCAACAATAACTTAAGCCTTAAATTAGTTAAAATTGTAGATGGCCTGGGATAATTCTATTCGTCGTCAATCATGGGTGTAATTTTGTTGAGAATACGGATGTATACAGATCCTTCTGCCATGGAATCGCATCCAGAGACCTACGTCTGCATATTTATTTGAATGTTTGGGCCTTAGTATTGCTGCTCTTCCATTTCTATTTCTATCATTCACCCATTATCTACAAACTTTGTTTTCATCTTTTTATTTTTTAATAAAATAATTTATTTGTTTTTTTCCCTTCCCAAAACCTATATTAGTACCTGATGATGTTTGAACAAATTTTGGGGTAAAATACTTTTTTGCCTATTTTGACCAATGTTCAGTGTAAATCCCATTAGTTCAATAAGAGCTTTAACTAACAATAATCACTTAATCTTCATTATATTCAGCGATTCTTCGAAGCTCTTTATGGTAGCTTGCATTTTGGCAATACTTCCTGTGCTGGATAGTTGGTGATCGTTTTTTCATTTTTTCTTTGCTTCTATTTTCATTTGTACAGGGAGATCAAAGTTCTCCAGGTATTATACCATTGGCTATAAGGGACGTGTTCAGCATTATCCAAGATGTAAGGATTTTTCAGGAGATGGCACTGTTAAATTTGTTACTATCAGTTGCTTGCTGCCTTTTTTTATTATATTAATTTATTGTTTTCGATTTTATCTTGTCTTTCACTTTTGGTTACTATACTGTTATTTTCGTTTGACATGGCATTTTTATGTTCCTTTTGGATTTTCCATGCTTCTTGGATGACACGTTTGCATTTACCTGATATTAATGTGAATTGTGAATTGTGCTTCAGCAGCATTTTACTGTATAACACGTTTGCATTTACCTGCTGTCCTATGGAAATCTTGTTTTTTGTCACAAAGATCTGATTTGGTTCCTGATATGCGTGAAATATTCTCCCTTATATACTGCGTTGTGTCTTTTATCATTTTTCTTTATCTTTTTATTTGTTTTATAACAAGAAACAATTTCATAATAAGCTACAGTGTTGAGATATAGGTGAACATTTACACCAAGATATAACTTAAGAAACCATAGCATCCAAAAAATCTGCCGAAGGAGAGATCCTTATCTTTATTTGAAGATCCTTTGGTTTCTTTCATTCATAAATCTGTCCAACAACTATGGCAATGTGTCCTTTTTTTTTTTATCACCATATATTCTTGATTGATGTGCTGATTTTTCATGCTTGATGTAACATACTCTACTTTATTTTCAAATTTTTCATGATTTCATTCCATAATTGATGGGTTTGGCTGATTAAAATTTTCCTAATATTCAGACTCCAGGGCGGGAGTTCTTGCTTCGTGTGTCATATATTGAAATCTACAATGAGGTAATCATCATTTGCACTAAAATCCATTTTGGTACATCCTTCTATATTGGAGTTTTATGA

mRNA sequence

ATGCAGATGTTCTTGTGCTTTTTTCTCCTCCGTGAAGTTGATCTCCTTGACAGGGTTTTTGGCTCCCAGACTTCTACTCCAGAGGTGTATGAAGTAGCGGCCCAGCCTGTCATCAAAGCTGCGATGGAAGGTGTCAATGGTCGTTTGAGTGCAACAAGAACAGTTAGAATTTACTGGAAACGTGCATCGGTTATTCTAGAGCATTATGCCATCCAATTTTTATTGCTGCAGGACTCGGACATTGAACGTCTTTGCGACAATGCAGGAACTGTATTTGCTTACGGTGTCACAAGCAGTGGGAAGACACACACTATGCATGGAGATCAAAGTTCTCCAGGTATTATACCATTGGCTATAAGGGACGTGTTCAGCATTATCCAAGATACTCCAGGGCGGGAGTTCTTGCTTCGTGTGTCATATATTGAAATCTACAATGAGGTAATCATCATTTGCACTAAAATCCATTTTGGTACATCCTTCTATATTGGAGTTTTATGA

Coding sequence (CDS)

ATGCAGATGTTCTTGTGCTTTTTTCTCCTCCGTGAAGTTGATCTCCTTGACAGGGTTTTTGGCTCCCAGACTTCTACTCCAGAGGTGTATGAAGTAGCGGCCCAGCCTGTCATCAAAGCTGCGATGGAAGGTGTCAATGGTCGTTTGAGTGCAACAAGAACAGTTAGAATTTACTGGAAACGTGCATCGGTTATTCTAGAGCATTATGCCATCCAATTTTTATTGCTGCAGGACTCGGACATTGAACGTCTTTGCGACAATGCAGGAACTGTATTTGCTTACGGTGTCACAAGCAGTGGGAAGACACACACTATGCATGGAGATCAAAGTTCTCCAGGTATTATACCATTGGCTATAAGGGACGTGTTCAGCATTATCCAAGATACTCCAGGGCGGGAGTTCTTGCTTCGTGTGTCATATATTGAAATCTACAATGAGGTAATCATCATTTGCACTAAAATCCATTTTGGTACATCCTTCTATATTGGAGTTTTATGA

Homology

[Close]

BLAST of CmoCh02G003740 vs. Swiss-Prot
Match: KN7D_ARATH (Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana GN=KIN7D PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ SPGIIPLAI+DVFSIIQDTPGREFLLRVSY+EIYNEVI
Sbjct: 172 GTVFAYGVTSSGKTHTMHGDQESPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVI 231

[Close]

BLAST of CmoCh02G003740 vs. Swiss-Prot
Match: KN7E_ORYSJ (Kinesin-like protein KIN-7E, chloroplastic OS=Oryza sativa subsp. japonica GN=KIN7E PE=3 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 8.3e-26
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHG+Q SPGIIPLA++DVFSIIQDTPGREFLLRVSY+EIYNEVI
Sbjct: 193 GTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFSIIQDTPGREFLLRVSYLEIYNEVI 252

[Close]

BLAST of CmoCh02G003740 vs. Swiss-Prot
Match: KN7K_ORYSJ (Kinesin-like protein KIN-7K, chloroplastic OS=Oryza sativa subsp. japonica GN=KIN7K PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ+ PGIIPLAI+DVFS+IQDTPGREFLLRVSY+EIYNEVI
Sbjct: 188 GTVFAYGVTSSGKTHTMHGDQNCPGIIPLAIKDVFSLIQDTPGREFLLRVSYLEIYNEVI 247

[Close]

BLAST of CmoCh02G003740 vs. Swiss-Prot
Match: KN7M_ARATH (Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana GN=KIN7M PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ  PGIIPLAI+DVFSIIQ+T GREFLLRVSY+EIYNEVI
Sbjct: 178 GTVFAYGVTSSGKTHTMHGDQDFPGIIPLAIKDVFSIIQETTGREFLLRVSYLEIYNEVI 237

[Close]

BLAST of CmoCh02G003740 vs. Swiss-Prot
Match: KN7D_ORYSJ (Kinesin-like protein KIN-7D, chloroplastic OS=Oryza sativa subsp. japonica GN=KIN7D PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GT+FAYGVTSSGKTHTMHGDQ SPGIIPLA++D FSIIQ+TP REFLLRVSY+EIYNEV+
Sbjct: 157 GTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVV 216

[Close]

BLAST of CmoCh02G003740 vs. TrEMBL
Match: B9IIB6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06040g PE=3 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-30
Identity = 75/132 (56.82%), Postives = 89/132 (67.42%), Query Frame = 1


Query: 17  DRVFGSQTSTPEVYEVAAQPVIKAAMEGVNGRLSATRTVRIYWKRASVILEHYAIQFLLL 76
           DRVFG  T+T  VY+VAAQ V+  AMEG+NG+ +   +     K    +   Y    L L
Sbjct: 119 DRVFGPTTTTRHVYDVAAQHVVNGAMEGINGKQNRYPSA----KELRFLHSFYVYNILPL 178

Query: 77  QDSDIERLCDNAGTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLL 136
                  L    GT+FAYGVTSSGKTHTMHGDQ SPGIIPLA++D F IIQ+TP REFLL
Sbjct: 179 F------LHALTGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFGIIQETPNREFLL 238

Query: 137 RVSYIEIYNEVI 149
           RVSY+EIYNEV+
Sbjct: 239 RVSYLEIYNEVV 240

[Close]

BLAST of CmoCh02G003740 vs. TrEMBL
Match: A0A0A0LPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G250930 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI
Sbjct: 177 GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 236

[Close]

BLAST of CmoCh02G003740 vs. TrEMBL
Match: A0A0D3BJC2_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ SPGIIPLAIRDVFSIIQDTPGREFLLRVSY+EIYNEVI
Sbjct: 167 GTVFAYGVTSSGKTHTMHGDQESPGIIPLAIRDVFSIIQDTPGREFLLRVSYLEIYNEVI 226

[Close]

BLAST of CmoCh02G003740 vs. TrEMBL
Match: A0A078FFV8_BRANA (BnaC03g60320D protein OS=Brassica napus GN=BnaC03g60320D PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ SPGIIPLAIRDVFSIIQDTPGREFLLRVSY+EIYNEVI
Sbjct: 167 GTVFAYGVTSSGKTHTMHGDQESPGIIPLAIRDVFSIIQDTPGREFLLRVSYLEIYNEVI 226

[Close]

BLAST of CmoCh02G003740 vs. TrEMBL
Match: F6I199_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00350 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-24
Identity = 57/60 (95.00%), Postives = 60/60 (100.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ+SPGIIPLAI+DVFSIIQDTPGREFLLRVSY+EIYNEVI
Sbjct: 179 GTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVI 238

[Close]

BLAST of CmoCh02G003740 vs. TAIR10
Match: AT4G39050.1 (AT4G39050.1 Kinesin motor family protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ SPGIIPLAI+DVFSIIQDTPGREFLLRVSY+EIYNEVI
Sbjct: 172 GTVFAYGVTSSGKTHTMHGDQESPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVI 231

[Close]

BLAST of CmoCh02G003740 vs. TAIR10
Match: AT2G21380.1 (AT2G21380.1 Kinesin motor family protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQ  PGIIPLAI+DVFSIIQ+T GREFLLRVSY+EIYNEVI
Sbjct: 178 GTVFAYGVTSSGKTHTMHGDQDFPGIIPLAIKDVFSIIQETTGREFLLRVSYLEIYNEVI 237

[Close]

BLAST of CmoCh02G003740 vs. TAIR10
Match: AT1G21730.1 (AT1G21730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHG+Q SPGIIPLA++DVFSIIQ+TP REFLLRVSY+EIYNEVI
Sbjct: 149 GTVFAYGVTSSGKTHTMHGEQRSPGIIPLAVKDVFSIIQETPEREFLLRVSYLEIYNEVI 208

[Close]

BLAST of CmoCh02G003740 vs. TAIR10
Match: AT3G12020.2 (AT3G12020.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-25
Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GT+FAYGVTSSGKTHTMHGDQ SPGIIPLA++D FSIIQ+TP REFLLR+SY+EIYNEV+
Sbjct: 143 GTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRISYMEIYNEVV 202

[Close]

BLAST of CmoCh02G003740 vs. TAIR10
Match: AT5G06670.1 (AT5G06670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-24
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GT+FAYGVTSSGKTHTMHG+Q SPGIIPLA++D FSIIQ+TP REFLLRVSY EIYNEV+
Sbjct: 149 GTIFAYGVTSSGKTHTMHGNQRSPGIIPLAVKDAFSIIQETPRREFLLRVSYFEIYNEVV 208

[Close]

BLAST of CmoCh02G003740 vs. NCBI nr
Match: gi|566208958|ref|XP_002323333.2| (hypothetical protein POPTR_0016s06040g [Populus trichocarpa])

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-30
Identity = 75/132 (56.82%), Postives = 89/132 (67.42%), Query Frame = 1


Query: 17  DRVFGSQTSTPEVYEVAAQPVIKAAMEGVNGRLSATRTVRIYWKRASVILEHYAIQFLLL 76
           DRVFG  T+T  VY+VAAQ V+  AMEG+NG+ +   +     K    +   Y    L L
Sbjct: 119 DRVFGPTTTTRHVYDVAAQHVVNGAMEGINGKQNRYPSA----KELRFLHSFYVYNILPL 178

Query: 77  QDSDIERLCDNAGTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLL 136
                  L    GT+FAYGVTSSGKTHTMHGDQ SPGIIPLA++D F IIQ+TP REFLL
Sbjct: 179 F------LHALTGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFGIIQETPNREFLL 238

Query: 137 RVSYIEIYNEVI 149
           RVSY+EIYNEV+
Sbjct: 239 RVSYLEIYNEVV 240

[Close]

BLAST of CmoCh02G003740 vs. NCBI nr
Match: gi|923515764|ref|XP_013646664.1| (PREDICTED: LOW QUALITY PROTEIN: kinesin-related protein 11-like [Brassica napus])

HSP 1 Score: 136.3 bits (342), Expect = 4.7e-29
Identity = 69/132 (52.27%), Postives = 85/132 (64.39%), Query Frame = 1


Query: 17  DRVFGSQTSTPEVYEVAAQPVIKAAMEGVNGRLSATRTVRIYWKRASVILEHYAIQFLLL 76
           DRVFG  T+T  VY+VAA  V+  AMEG+N   S+ + + I   +               
Sbjct: 117 DRVFGPTTTTRNVYDVAAHQVVNGAMEGINVCYSSEQLIXIXXHQCX------------- 176

Query: 77  QDSDIERLCDNAGTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLL 136
                       GT+FAYGVTSSGKTHTMHGDQ SPGIIPLA++D FSIIQ+TP REFLL
Sbjct: 177 ---------STTGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLL 226

Query: 137 RVSYIEIYNEVI 149
           R+SY+E+YNEV+
Sbjct: 237 RISYLELYNEVV 226

[Close]

BLAST of CmoCh02G003740 vs. NCBI nr
Match: gi|778669485|ref|XP_011649254.1| (PREDICTED: kinesin-related protein 11-like [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI
Sbjct: 177 GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 236

[Close]

BLAST of CmoCh02G003740 vs. NCBI nr
Match: gi|659122166|ref|XP_008461002.1| (PREDICTED: kinesin-related protein 11-like [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1


Query: 89  GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 148
           GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI
Sbjct: 177 GTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYNEVI 236

[Close]

BLAST of CmoCh02G003740 vs. NCBI nr
Match: gi|658014303|ref|XP_008342472.1| (PREDICTED: kinesin-related protein 11-like [Malus domestica])

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-25
Identity = 57/63 (90.48%), Postives = 62/63 (98.41%), Query Frame = 1


Query: 86  DNAGTVFAYGVTSSGKTHTMHGDQSSPGIIPLAIRDVFSIIQDTPGREFLLRVSYIEIYN 145
           DN GTVFAYGVTSSGKTHTMHGDQ++PG+IPLAI+DVFSIIQDTPGREFLLRVSY+EIYN
Sbjct: 19  DNVGTVFAYGVTSSGKTHTMHGDQNAPGVIPLAIKDVFSIIQDTPGREFLLRVSYLEIYN 78

Query: 146 EVI 149
           EVI
Sbjct: 79  EVI 81

The following BLAST results are available for this feature:

BLAST of CmoCh02G003740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KN7D_ARATH	2.2e-26	95.00	Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana GN=KIN7D PE=2...	[more]
KN7E_ORYSJ	8.3e-26	91.67	Kinesin-like protein KIN-7E, chloroplastic OS=Oryza sativa subsp. japonica GN=KI...	[more]
KN7K_ORYSJ	1.1e-25	91.67	Kinesin-like protein KIN-7K, chloroplastic OS=Oryza sativa subsp. japonica GN=KI...	[more]
KN7M_ARATH	2.7e-24	90.00	Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana GN=KIN7M PE=2...	[more]
KN7D_ORYSJ	2.7e-24	85.00	Kinesin-like protein KIN-7D, chloroplastic OS=Oryza sativa subsp. japonica GN=KI...	[more]

BLAST of CmoCh02G003740 vs. TrEMBL


Match Name	E-value	Identity	Description
B9IIB6_POPTR	1.7e-30	56.82	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06040g PE=3 SV=2	[more]
A0A0A0LPD7_CUCSA	2.2e-25	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G250930 PE=3 SV=1	[more]
A0A0D3BJC2_BRAOL	1.1e-24	96.67	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1	[more]
A0A078FFV8_BRANA	1.1e-24	96.67	BnaC03g60320D protein OS=Brassica napus GN=BnaC03g60320D PE=3 SV=1	[more]
F6I199_VITVI	1.9e-24	95.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00350 PE=3 SV=...	[more]

BLAST of CmoCh02G003740 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39050.1	1.2e-27	95.00	Kinesin motor family protein	[more]
AT2G21380.1	1.5e-25	90.00	Kinesin motor family protein	[more]
AT1G21730.1	1.5e-25	88.33	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT3G12020.2	2.6e-25	83.33	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G06670.1	1.7e-24	83.33	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of CmoCh02G003740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|566208958\|ref\|XP_002323333.2\|	2.5e-30	56.82	hypothetical protein POPTR_0016s06040g [Populus trichocarpa]	[more]
gi\|923515764\|ref\|XP_013646664.1\|	4.7e-29	52.27	PREDICTED: LOW QUALITY PROTEIN: kinesin-related protein 11-like [Brassica napus]	[more]
gi\|778669485\|ref\|XP_011649254.1\|	3.1e-25	100.00	PREDICTED: kinesin-related protein 11-like [Cucumis sativus]	[more]
gi\|659122166\|ref\|XP_008461002.1\|	3.1e-25	100.00	PREDICTED: kinesin-related protein 11-like [Cucumis melo]	[more]
gi\|658014303\|ref\|XP_008342472.1\|	3.1e-25	90.48	PREDICTED: kinesin-related protein 11-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR027417	P-loop_NTPase
IPR027640	Kinesin-like_fam

Vocabulary: **Molecular Function**
Term	Definition
GO:0003777	microtubule motor activity
GO:0005524	ATP binding
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
cellular_component	GO:0005874	microtubule
cellular_component	GO:0045298	tubulin complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003740.1	CmoCh02G003740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001752	Kinesin motor domain	GENE3D	G3DSA:3.40.850.10		coord: 89..148 score: 1.0E-28coord: 16..46 score: 1.0
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 87..148 score: 7.4
IPR001752	Kinesin motor domain	PROFILE	PS50067	KINESIN_MOTOR_2	coord: 1..165 score: 18
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 88..148 score: 2.87
IPR027640	Kinesin-like protein	PANTHER	PTHR24115	FAMILY NOT NAMED	coord: 17..47 score: 1.4E-63coord: 90..148 score: 1.4
None	No IPR available	PANTHER	PTHR24115:SF497	KINESIN MOTOR FAMILY PROTEIN	coord: 17..47 score: 1.4E-63coord: 90..148 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003740	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003740	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003740	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003740	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003740	Melon (DHL92) v3.5.1	cmomeB538
CmoCh02G003740	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003740	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003740	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003740	Watermelon (97103) v1	cmowmB580
CmoCh02G003740	Watermelon (97103) v1	cmowmB603
CmoCh02G003740	Cucurbita pepo (Zucchini)	cmocpeB566
CmoCh02G003740	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003740	Cucurbita pepo (Zucchini)	cmocpeB591
CmoCh02G003740	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G003740	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G003740	Bottle gourd (USVL1VR-Ls)	cmolsiB545
CmoCh02G003740	Cucumber (Gy14) v2	cgybcmoB220
CmoCh02G003740	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003740	Melon (DHL92) v3.6.1	cmomedB617
CmoCh02G003740	Melon (DHL92) v3.6.1	cmomedB631
CmoCh02G003740	Silver-seed gourd	carcmoB0247
CmoCh02G003740	Silver-seed gourd	carcmoB0414
CmoCh02G003740	Silver-seed gourd	carcmoB0436
CmoCh02G003740	Silver-seed gourd	carcmoB0585
CmoCh02G003740	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G003740	Cucumber (Chinese Long) v3	cmocucB0757
CmoCh02G003740	Watermelon (97103) v2	cmowmbB587
CmoCh02G003740	Watermelon (97103) v2	cmowmbB592
CmoCh02G003740	Wax gourd	cmowgoB0736
CmoCh02G003740	Cucurbita moschata (Rifu)	cmocmoB120
CmoCh02G003740	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003740	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G003740	Cucumber (Gy14) v1	cgycmoB0253
CmoCh02G003740	Cucumber (Gy14) v1	cgycmoB1039
CmoCh02G003740	Cucurbita maxima (Rimu)	cmacmoB153
CmoCh02G003740	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003740	Cucurbita maxima (Rimu)	cmacmoB619