CmoCh02G003530 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G003530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSAUR-like auxin-responsive protein family
LocationCmo_Chr02 : 1767150 .. 1767437 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGATCGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGGGAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA

mRNA sequence

ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGATCGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGGGAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA

Coding sequence (CDS)

ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGATCGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGGGAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA
Homology
[Close]
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1 

Query: 26 PRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAF 85
          P+G +AVYVGE   Q+KR++VPIS+LN PSF+ LLS +EEEFGF HP GGLTIPC ED F
Sbjct: 25 PKGFLAVYVGES--QKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTF 84

Query: 86 IDLTSRF 93
          I++TSRF
Sbjct: 85 INVTSRF 89

[Close]
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21
Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 1 

Query: 26 PRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAF 85
          P+G +AVYVGE   Q+KR++VP+S+LN PSF+ LLS +EEEFGF HP GGLTIPC ED F
Sbjct: 25 PKGFLAVYVGES--QKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTF 84

Query: 86 IDLTSRFH 94
          I++TSR H
Sbjct: 85 INVTSRLH 90

[Close]
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21
Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 1 

Query: 13 AKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHP 72
          AKQ+++ R   + PRG +AVYVGE D ++KR+VVP+S+LN P F+QLLS +EEEFG+ HP
Sbjct: 10 AKQIIR-RESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHP 69

Query: 73 PGGLTIPCKEDAFIDLTSR 92
           GGLTIPC E  F  +TS+
Sbjct: 70 MGGLTIPCHESLFFTVTSQ 87

[Close]
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 1 

Query: 13 AKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHP 72
          AK++L        P+G +AVYVGE   Q+KR++VP+S+L+ PSF+ LLS +EEEFGF HP
Sbjct: 10 AKKILSRSTASAAPKGFLAVYVGES--QKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 69

Query: 73 PGGLTIPCKEDAFIDLTSR 92
           GGLTIPC ED FI++TSR
Sbjct: 70 MGGLTIPCPEDTFINVTSR 86

[Close]
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.1e-20
Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 1 

Query: 26 PRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAF 85
          P+G +AVYVGE   Q+KR++VP+S+LN PSF+ LLS +EEEFGF HP GGLTIPC ED F
Sbjct: 25 PKGFLAVYVGES--QKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTF 84

Query: 86 IDLTSR 92
          I++TSR
Sbjct: 85 INVTSR 88

[Close]
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LIY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258660 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 5.5e-45
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQ+LKMRN  NVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60

Query: 61 SHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA 96
          SH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32
Identity = 75/100 (75.00%), Postives = 83/100 (83.00%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
          MG RL  SL+ HAKQ+LKM     +N LNVP+GH+AVYVGEI  QRKRFVVPIS+LN PS
Sbjct: 1  MGFRL-LSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEI--QRKRFVVPISYLNDPS 60

Query: 61 FKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA 96
          F+QLLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSR   A
Sbjct: 61 FQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-31
Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
          MGIRL  SL+ HAKQ+LK+     +N L+VP+GH+AVYVGEI  QRKRFVVPIS+LNHPS
Sbjct: 1  MGIRL-LSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEI--QRKRFVVPISYLNHPS 60

Query: 61 FKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR 92
          FKQLL HAEEEFGFHHP GGLTIPCKEDAF ++TS+
Sbjct: 61 FKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSK 93

[Close]
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 8.4e-30
Identity = 68/96 (70.83%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKMRN-----PLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
          MGIRL  SL+ + KQ+LK+++      L+VP+GH+A+YVGEI  QRKRFVVPIS+LNHPS
Sbjct: 1  MGIRL-LSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEI--QRKRFVVPISYLNHPS 60

Query: 61 FKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR 92
          F+QLL+H+EEEFGFHHP G LTIPCKEDAFIDLTSR
Sbjct: 61 FQQLLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSR 93

[Close]
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A067DUU5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040932mg PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-29
Identity = 71/100 (71.00%), Postives = 79/100 (79.00%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKMRN-------PLNVPRGHIAVYVGEIDIQRKRFVVPISFLNH 60
          MGIRLPS +IH+AKQ+LK  N          VPRGHIAVYVGE++  RKRFVVPIS+LNH
Sbjct: 1  MGIRLPS-MIHNAKQILKRHNNHALKSADQVVPRGHIAVYVGEME--RKRFVVPISYLNH 60

Query: 61 PSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFH 94
          P F  LL+ AEEEFGF+HP GGLTIPCKEDAFIDLTSR H
Sbjct: 61 PLFADLLNRAEEEFGFNHPMGGLTIPCKEDAFIDLTSRLH 97

[Close]
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 6.6e-26
Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 1 

Query: 14 KQMLKMRNPLN-----------VPRGHIAVYVGE-IDIQRKRFVVPISFLNHPSFKQLLS 73
          KQ+LK+ +  N           VP+GH+AVYVGE I++++KRFVVPISFLNHPSFK+ LS
Sbjct: 13 KQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLS 72

Query: 74 HAEEEFGFHHPPGGLTIPCKEDAFIDL 89
           AEEEFGF+HP GGLTIPC+E+ F+DL
Sbjct: 73 RAEEEFGFNHPMGGLTIPCREEVFLDL 99

[Close]
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 7.3e-25
Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          M IRL  S + ++KQ  K ++   VP+GH+AVYVGE    +KRFVVPIS+LNHPSF+ LL
Sbjct: 1  MAIRL--SRVINSKQSQKQQS--RVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLL 60

Query: 61 SHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRF 93
          S AEEEFGF+HP GGLTIPC+E+ F+ L + +
Sbjct: 61 SRAEEEFGFNHPIGGLTIPCREETFVGLLNSY 88

[Close]
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-24
Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKM----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSF 60
          M IR+ S ++  +KQ+LK      N + +P+GH+AVYVGE+ +Q++RFVVP+++L+HP F
Sbjct: 1  MAIRI-SRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEM-MQKRRFVVPVTYLSHPCF 60

Query: 61 KQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR 92
          ++LL  AEEEFGF HP GGLTIPC E  FIDL SR
Sbjct: 61 QKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASR 93

[Close]
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-23
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKMR---------NPLNVPRGHIAVYVGEIDIQRKRFVVPISFL 60
          M IR+P  ++  +KQ+L+           + L+VP+G++AVYVGE ++  KRFVVP+S+L
Sbjct: 1  MAIRIPR-VLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNM--KRFVVPVSYL 60

Query: 61 NHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFH 94
          + PSF+ LL  AEEEFGF HP GGLTIPC E+ FIDL SRF+
Sbjct: 61 DQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-22
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 1 

Query: 4  RLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHA 63
          +L  SL      +L      NVP+GH+AVYVGE    RKRFV+PIS+LNHP F+ LL+ A
Sbjct: 14 KLQRSLSARIASLLATSGTNNVPKGHVAVYVGET-YHRKRFVIPISYLNHPLFQGLLNLA 73

Query: 64 EEEFGFHHPPGGLTIPCKEDAFIDLTS 91
          EEEFGF HP GGLTIPC ED F  L S
Sbjct: 74 EEEFGFDHPMGGLTIPCTEDYFTALAS 99

[Close]
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|778669577|ref|XP_011649269.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 7.8e-45
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQ+LKMRN  NVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60

Query: 61 SHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA 96
          SH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|659115584|ref|XP_008457628.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-43
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQ+LK+RN  NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKIRNQSNVPRGHIAVYVGEIDIQRKRFVVPISLLNHPSFKQLL 60

Query: 61 SHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA 96
          SH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32
Identity = 75/100 (75.00%), Postives = 83/100 (83.00%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
          MG RL  SL+ HAKQ+LKM     +N LNVP+GH+AVYVGEI  QRKRFVVPIS+LN PS
Sbjct: 1  MGFRL-LSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEI--QRKRFVVPISYLNDPS 60

Query: 61 FKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA 96
          F+QLLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSR   A
Sbjct: 61 FQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31
Identity = 74/100 (74.00%), Postives = 83/100 (83.00%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
          MGIRL  SL+ HAKQ+LKM     +N LNVP+GH+AVYVGEI  QRKRFVVPIS+LN PS
Sbjct: 1  MGIRL-LSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEI--QRKRFVVPISYLNDPS 60

Query: 61 FKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA 96
          F+QLL+ AEEEFGFHHP GGLTIPCKEDAF+DLTSR   A
Sbjct: 61 FQQLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 1  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
          MGIRL  SL+ HAKQ+LKM     +N L+VP+GH+AVYVGEI  Q KRFVVPIS+LNHPS
Sbjct: 1  MGIRL-LSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEI--QSKRFVVPISYLNHPS 60

Query: 61 FKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR 92
          F+QLLS+AEEEFGFHHP GGLTIPCKED F+DLTSR
Sbjct: 61 FQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSR 93

The following BLAST results are available for this feature:
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAU20_ARATH7.9e-2168.66Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1[more]
SAU23_ARATH7.9e-2166.18Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1[more]
SAU15_ARATH7.9e-2158.23Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1[more]
SAU21_ARATH3.0e-2058.23Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1[more]
SAU24_ARATH5.1e-2066.67Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1[more]
BLAST of CmoCh02G003530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIY9_CUCSA5.5e-4591.58Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258660 PE=4 SV=1[more]
A0A0A0LPI0_CUCSA1.1e-3275.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1[more]
A0A0A0LLF1_CUCSA2.0e-3173.96Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1[more]
A0A0A0LIZ9_CUCSA8.4e-3070.83Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1[more]
A0A067DUU5_CITSI1.4e-2971.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040932mg PE=4 SV=1[more]
BLAST of CmoCh02G003530 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34810.16.6e-2662.07 SAUR-like auxin-responsive protein family [more]
AT4G34800.17.3e-2558.70 SAUR-like auxin-responsive protein family [more]
AT2G21210.12.1e-2455.79 SAUR-like auxin-responsive protein family [more]
AT4G38840.11.4e-2352.94 SAUR-like auxin-responsive protein family [more]
AT4G34770.11.5e-2258.62 SAUR-like auxin-responsive protein family [more]
BLAST of CmoCh02G003530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778669577|ref|XP_011649269.1|7.8e-4591.58PREDICTED: auxin-induced protein 15A-like [Cucumis sativus][more]
gi|659115584|ref|XP_008457628.1|1.1e-4389.47PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|700206757|gb|KGN61876.1|1.5e-3275.00hypothetical protein Csa_2G258720 [Cucumis sativus][more]
gi|659115592|ref|XP_008457632.1|1.3e-3174.00PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|659115596|ref|XP_008457635.1|1.7e-3175.00PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G003530.1CmoCh02G003530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 20..90
score: 1.2
NoneNo IPR availablePANTHERPTHR31929FAMILY NOT NAMEDcoord: 2..95
score: 7.6
NoneNo IPR availablePANTHERPTHR31929:SF3SUBFAMILY NOT NAMEDcoord: 2..95
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G003530Cucsa.169530Cucumber (Gy14) v1cgycmoB0483
CmoCh02G003530CmaCh02G003510Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G003530MELO3C020757Melon (DHL92) v3.5.1cmomeB527
CmoCh02G003530Lsi10G004360Bottle gourd (USVL1VR-Ls)cmolsiB533
CmoCh02G003530CsaV3_2G015450Cucumber (Chinese Long) v3cmocucB0687
CmoCh02G003530Cla97C11G210440Watermelon (97103) v2cmowmbB587
CmoCh02G003530Bhi10G001532Wax gourdcmowgoB0736
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh02G003530CmoCh20G007830Cucurbita moschata (Rifu)cmocmoB416
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G003530Cucurbita moschata (Rifu)cmocmoB388
CmoCh02G003530Cucurbita moschata (Rifu)cmocmoB404
CmoCh02G003530Cucumber (Gy14) v1cgycmoB1053
CmoCh02G003530Cucurbita maxima (Rimu)cmacmoB554
CmoCh02G003530Wild cucumber (PI 183967)cmocpiB582
CmoCh02G003530Wild cucumber (PI 183967)cmocpiB644
CmoCh02G003530Cucumber (Chinese Long) v2cmocuB577
CmoCh02G003530Cucumber (Chinese Long) v2cmocuB633
CmoCh02G003530Melon (DHL92) v3.5.1cmomeB552
CmoCh02G003530Watermelon (Charleston Gray)cmowcgB515
CmoCh02G003530Watermelon (Charleston Gray)cmowcgB530
CmoCh02G003530Watermelon (97103) v1cmowmB580
CmoCh02G003530Watermelon (97103) v1cmowmB603
CmoCh02G003530Cucurbita pepo (Zucchini)cmocpeB575
CmoCh02G003530Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G003530Cucumber (Gy14) v2cgybcmoB220
CmoCh02G003530Cucumber (Gy14) v2cgybcmoB944
CmoCh02G003530Melon (DHL92) v3.6.1cmomedB606
CmoCh02G003530Silver-seed gourdcarcmoB0436
CmoCh02G003530Silver-seed gourdcarcmoB0585
CmoCh02G003530Silver-seed gourdcarcmoB1115