CmoCh02G003500 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr02 : 1750951 .. 1751244 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCAGACTACTTTCACTTCTTCTCAATGCCAAGCAAGCTGTCAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAGACAAAGAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACCGTGCCGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTGCAATCTTGCTGA

mRNA sequence

ATGGGAATCAGACTACTTTCACTTCTTCTCAATGCCAAGCAAGCTGTCAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAGACAAAGAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACCGTGCCGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTGCAATCTTGCTGA

Coding sequence (CDS)

ATGGGAATCAGACTACTTTCACTTCTTCTCAATGCCAAGCAAGCTGTCAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAGACAAAGAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACCGTGCCGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTGCAATCTTGCTGA

Homology

[Close]

BLAST of CmoCh02G003500 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 1


Query: 5  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNR 64
          L+  LL AK+ +   TAS+      PKG +AVYVG+ + KR++VP++YL+ PSF ALL++
Sbjct: 3  LVRSLLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK 62

Query: 65 AEEEFGFKHPTGGLTIPCREDVFINLTSKLQ 96
          +EEEFGF HP GGLTIPC ED FIN+TS+LQ
Sbjct: 63 SEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003500 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 1


Query: 5  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNR 64
          L+  LL AK+ +   TA+       PKG +AVYVG+ + KR++VP++YLN PSF ALL++
Sbjct: 3  LVRSLLGAKKILSRSTAAVS---AAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSK 62

Query: 65 AEEEFGFKHPTGGLTIPCREDVFINLTSKLQ 96
          +E+EFGF HP GGLTIPC ED FIN+TS+LQ
Sbjct: 63 SEDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003500 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEE 68
          LL AK+ +   T +       PKG +AVYVG+ + KR++VP++YLN PSF ALL+++EEE
Sbjct: 7  LLGAKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSKLQ 96
          FGF HP GGLTIPC ED FIN+TS+LQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003500 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEE 68
          LL AK+ +   T ++      PKG +AVYVG+ + KR++VPI+YLN PSF ALL+++EEE
Sbjct: 7  LLGAKKILSRSTTAAS---AAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSKLQ 96
          FGF HP GGLTIPC ED FIN+TS+ Q
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003500 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-23
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEE 68
          LL AK+ +   TA+       PKG +AVYVG+ + KR++VP++YL+ PSF ALL+++EEE
Sbjct: 7  LLGAKKILSRSTAAGS---AAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSKLQ 96
          FGF HP GGLTIPC ED FIN+TS+LQ
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003500 vs. TrEMBL
Match: A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-41
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIRL SLLLNAKQ  KMHT SSRN+CGVPKGHIAVYVGDIE KRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ 96
          LL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of CmoCh02G003500 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-33
Identity = 68/96 (70.83%), Postives = 82/96 (85.42%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIR+ SLLLNAKQ  +M + S+R    +PKGHIAVYVG+IE KRFVVP++YLNHP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
          LLNRAEEEFGF HP+GGLTIPC+ED FI+LTSKL +
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHT 96

[Close]

BLAST of CmoCh02G003500 vs. TrEMBL
Match: A0A061DZI1_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-32
Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 1


Query: 1   MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
           MG RL SL+L+++Q +K H+  SR +  VPKGH+AVYVG+ + KRFVVPI+YLNHPSF+ 
Sbjct: 80  MGFRLPSLILSSRQILKHHSGFSRKQPDVPKGHVAVYVGEAQRKRFVVPISYLNHPSFAE 139

Query: 61  LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
           LLNRAEEEFGF HPTGGLTIPC+ED FINLTS+L S
Sbjct: 140 LLNRAEEEFGFNHPTGGLTIPCKEDAFINLTSQLHS 175

[Close]

BLAST of CmoCh02G003500 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-32
Identity = 69/96 (71.88%), Postives = 81/96 (84.38%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIRL S+LLNAKQ +KM   S+RN+  VPKGHIAVYVG+I+ KRFVVPI+YL +PSF  
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
          LLNR+EEEFGF HP GGLTIPCRED FINLT++L +
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHT 96

[Close]

BLAST of CmoCh02G003500 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.1e-32
Identity = 69/96 (71.88%), Postives = 81/96 (84.38%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIRL S+LLNAKQ +KM   S+RN+  VPKGHIAVYVG+I+ KRFVVPI+YL +PSF  
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
          LLNR+EEEFGF HP GGLTIPCRED FINLT++L +
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHT 96

[Close]

BLAST of CmoCh02G003500 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-26
Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 1


Query: 1   MGIRLLSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVGD---IETKRFVVPIA 60
           MG+   ++    KQ +K+++ ++RNR        VPKGH+AVYVG+   +E KRFVVPI+
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINL-TSKLQ 96
           +LNHPSF   L+RAEEEFGF HP GGLTIPCRE+VF++L  S+LQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh02G003500 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 53/97 (54.64%), Postives = 72/97 (74.23%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDI-ETKRFVVPIAYLNHPSFS 60
          M IR+  +L ++KQ +K  + SS N   +PKGH+AVYVG++ + +RFVVP+ YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNN-VAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
           LL +AEEEFGF HP GGLTIPC E +FI+L S+L +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLST 96

[Close]

BLAST of CmoCh02G003500 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 7.5e-25
Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 1


Query: 5  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNR 64
          L+  LL AK+ +   TAS+      PKG +AVYVG+ + KR++VP++YL+ PSF ALL++
Sbjct: 3  LVRSLLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK 62

Query: 65 AEEEFGFKHPTGGLTIPCREDVFINLTSKLQ 96
          +EEEFGF HP GGLTIPC ED FIN+TS+LQ
Sbjct: 63 SEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003500 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 9.7e-25
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 1


Query: 5  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNR 64
          L+  LL AK+ +   TA+       PKG +AVYVG+ + KR++VP++YLN PSF ALL++
Sbjct: 3  LVRSLLGAKKILSRSTAAVS---AAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSK 62

Query: 65 AEEEFGFKHPTGGLTIPCREDVFINLTSKLQ 96
          +E+EFGF HP GGLTIPC ED FIN+TS+LQ
Sbjct: 63 SEDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003500 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-24
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEE 68
          LL AK+ +   T +       PKG +AVYVG+ + KR++VP++YLN PSF ALL+++EEE
Sbjct: 7  LLGAKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSKLQ 96
          FGF HP GGLTIPC ED FIN+TS+LQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003500 vs. NCBI nr
Match: gi|449458562|ref|XP_004147016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIRL SLLLNAKQ  KMHT SSRN+CGVPKGHIAVYVGDIE KRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ 96
          LL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of CmoCh02G003500 vs. NCBI nr
Match: gi|659115600|ref|XP_008457637.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-41
Identity = 83/95 (87.37%), Postives = 87/95 (91.58%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIRL SLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIE KRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ 96
          LL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of CmoCh02G003500 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 5.4e-33
Identity = 68/96 (70.83%), Postives = 82/96 (85.42%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIR+ SLLLNAKQ  +M + S+R    +PKGHIAVYVG+IE KRFVVP++YLNHP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
          LLNRAEEEFGF HP+GGLTIPC+ED FI+LTSKL +
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHT 96

[Close]

BLAST of CmoCh02G003500 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 5.4e-33
Identity = 70/96 (72.92%), Postives = 81/96 (84.38%), Query Frame = 1


Query: 1  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
          MGIRL S+LLNAKQ +KM   S+RN+  VPKGHIAVYVG+I+ KRFVVPI+YL HPSF  
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
          LLNR+EEEFGF HP GGLTIPCRED FINLT++L +
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHT 96

[Close]

BLAST of CmoCh02G003500 vs. NCBI nr
Match: gi|590684897|ref|XP_007041961.1| (SAUR-like auxin-responsive protein family [Theobroma cacao])

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-32
Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 1


Query: 1   MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSA 60
           MG RL SL+L+++Q +K H+  SR +  VPKGH+AVYVG+ + KRFVVPI+YLNHPSF+ 
Sbjct: 80  MGFRLPSLILSSRQILKHHSGFSRKQPDVPKGHVAVYVGEAQRKRFVVPISYLNHPSFAE 139

Query: 61  LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS 97
           LLNRAEEEFGF HPTGGLTIPC+ED FINLTS+L S
Sbjct: 140 LLNRAEEEFGFNHPTGGLTIPCKEDAFINLTSQLHS 175

The following BLAST results are available for this feature:

BLAST of CmoCh02G003500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU21_ARATH	1.3e-23	57.14	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU22_ARATH	1.7e-23	56.04	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU24_ARATH	2.3e-23	57.47	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	3.9e-23	57.47	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU19_ARATH	3.9e-23	57.47	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CmoCh02G003500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM71_CUCSA	1.3e-41	88.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	3.7e-33	70.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A061DZI1_THECC	1.9e-32	69.79	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 ...	[more]
A0A0A0LPJ1_CUCSA	2.4e-32	71.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LM74_CUCSA	4.1e-32	71.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]

BLAST of CmoCh02G003500 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34810.1	1.8e-26	55.24	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.0e-25	54.64	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	7.5e-25	57.14	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	9.7e-25	56.04	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.3e-24	57.47	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh02G003500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458562\|ref\|XP_004147016.1\|	1.8e-41	88.42	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115600\|ref\|XP_008457637.1\|	5.4e-41	87.37	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	5.4e-33	70.83	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669614\|ref\|XP_011649278.1\|	5.4e-33	72.92	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|590684897\|ref\|XP_007041961.1\|	2.7e-32	69.79	SAUR-like auxin-responsive protein family [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003500.1	CmoCh02G003500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..92 score: 2.2
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 9.1
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 9.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G003500	Cucsa.382060	Cucumber (Gy14) v1	cgycmoB1053
CmoCh02G003500	CmaCh02G003410	Cucurbita maxima (Rimu)	cmacmoB619

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003500	Watermelon (97103) v2	cmowmbB587
CmoCh02G003500	Wax gourd	cmowgoB0736
CmoCh02G003500	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003500	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G003500	Cucurbita moschata (Rifu)	cmocmoB416
CmoCh02G003500	Cucumber (Gy14) v1	cgycmoB0483
CmoCh02G003500	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003500	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003500	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003500	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003500	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003500	Melon (DHL92) v3.5.1	cmomeB527
CmoCh02G003500	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003500	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003500	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003500	Watermelon (97103) v1	cmowmB580
CmoCh02G003500	Watermelon (97103) v1	cmowmB603
CmoCh02G003500	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003500	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G003500	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G003500	Cucumber (Gy14) v2	cgybcmoB220
CmoCh02G003500	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003500	Melon (DHL92) v3.6.1	cmomedB606
CmoCh02G003500	Silver-seed gourd	carcmoB0436
CmoCh02G003500	Cucumber (Chinese Long) v3	cmocucB0687