CmoCh02G003440 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr02 : 1746452 .. 1746745 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAGCGAGCTGTCAAAATGCATACCGCTTCTTCCAGCAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATGTTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAACAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTGTTCATCAATCTCACATCCAGGCTGCAATCTTCATGA

mRNA sequence

ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAGCGAGCTGTCAAAATGCATACCGCTTCTTCCAGCAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATGTTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAACAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTGTTCATCAATCTCACATCCAGGCTGCAATCTTCATGA

Coding sequence (CDS)

ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAGCGAGCTGTCAAAATGCATACCGCTTCTTCCAGCAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATGTTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAACAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTGTTCATCAATCTCACATCCAGGCTGCAATCTTCATGA

Homology

[Close]

BLAST of CmoCh02G003440 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   TA+ S     PKG +AVYVG+ ++KR++VP++YLN PSF ALL+ +E+E
Sbjct: 7  LLGAKKILSRSTAAVS---AAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003440 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   T + S     PKG +AVYVG+ ++KR++VP++YLN PSF ALL+ +EEE
Sbjct: 7  LLGAKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003440 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   T ++S     PKG +AVYVG+ ++KR++VPI+YLN PSF ALL+ +EEE
Sbjct: 7  LLGAKKILSRSTTAAS---AAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSR Q
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003440 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   TA+ S     PKG +AVYVG+ ++KR++VP++YL+ PSF ALL+ +EEE
Sbjct: 7  LLGAKKILSRSTAAGS---AAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003440 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.6e-24
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   TAS++     PKG +AVYVG+ ++KR++VP++YL+ PSF ALL+ +EEE
Sbjct: 7  LLGAKKILSRSTASAA-----PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003440 vs. TrEMBL
Match: A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-43
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAK+  KMHT SS N+CGVPKGHIAVYVGD+ERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CmoCh02G003440 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-33
Identity = 66/97 (68.04%), Postives = 83/97 (85.57%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIR+PSLLLNAK+  +M + S+     +PKGHIAVYVG++ERKRFVVP++YLNHP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LLN AEEEFGF HP+GGLTIPC+ED FI+LTS+L +S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of CmoCh02G003440 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.4e-33
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIRLPS+LLNAK+ +KM   S+ N+  VPKGHIAVYVG+++RKRFVVPI+YL +PSF  
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LLN +EEEFGF HP GGLTIPCRED FINLT+RL +S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003440 vs. TrEMBL
Match: A0A061DZI1_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 1


Query: 1   MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
           MG RLPSL+L++++ +K H+  S  +  VPKGH+AVYVG+ +RKRFVVPI+YLNHPSF+ 
Sbjct: 80  MGFRLPSLILSSRQILKHHSGFSRKQPDVPKGHVAVYVGEAQRKRFVVPISYLNHPSFAE 139

Query: 61  LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS 97
           LLN AEEEFGF HPTGGLTIPC+ED FINLTS+L S
Sbjct: 140 LLNRAEEEFGFNHPTGGLTIPCKEDAFINLTSQLHS 175

[Close]

BLAST of CmoCh02G003440 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.1e-32
Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIRL S+LLNAK+ +KM   S+ N+  VPKGHIAVYVG+++RKRFVVPI+YL +PSF  
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LLN +EEEFGF HP GGLTIPCRED FINLT+RL +S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003440 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-26
Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDV-ERKRFVVPIAYLNHPSFS 60
          M IR+  +L ++K+ +K   + SSN   +PKGH+AVYVG++ +++RFVVP+ YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKS-LSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
           LL  AEEEFGF HP GGLTIPC E +FI+L SRL +S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh02G003440 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 6.8e-26
Identity = 53/97 (54.64%), Postives = 73/97 (75.26%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVK----MHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHP 60
          M IR+P +L ++K+ ++    + ++SSS+   VPKG++AVYVG+   KRFVVP++YL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFSALLNSAEEEFGFKHPTGGLTIPCREDVFINLTSR 94
          SF  LL  AEEEFGF HP GGLTIPC E++FI+L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh02G003440 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   T + S     PKG +AVYVG+ ++KR++VP++YLN PSF ALL+ +EEE
Sbjct: 7  LLGAKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003440 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   TA+ S     PKG +AVYVG+ ++KR++VP++YLN PSF ALL+ +E+E
Sbjct: 7  LLGAKKILSRSTAAVS---AAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003440 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL AK+ +   T ++S     PKG +AVYVG+ ++KR++VPI+YLN PSF ALL+ +EEE
Sbjct: 7  LLGAKKILSRSTTAAS---AAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSR Q
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003440 vs. NCBI nr
Match: gi|449458562|ref|XP_004147016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-43
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAK+  KMHT SS N+CGVPKGHIAVYVGD+ERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CmoCh02G003440 vs. NCBI nr
Match: gi|659115600|ref|XP_008457637.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 181.4 bits (459), Expect = 7.5e-43
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLL NAK+  KMHT SS N+CGVPKGHIAVYVGD+ERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CmoCh02G003440 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 8.3e-34
Identity = 70/97 (72.16%), Postives = 82/97 (84.54%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIRLPS+LLNAK+ +KM   S+ N+  VPKGHIAVYVG+++RKRFVVPI+YL HPSF  
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LLN +EEEFGF HP GGLTIPCRED FINLT+RL +S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003440 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 4.1e-33
Identity = 66/97 (68.04%), Postives = 83/97 (85.57%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIR+PSLLLNAK+  +M + S+     +PKGHIAVYVG++ERKRFVVP++YLNHP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LLN AEEEFGF HP+GGLTIPC+ED FI+LTS+L +S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of CmoCh02G003440 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 9.2e-33
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60
          MGIRLPS+LLNAK+ +KM   S+ N+  VPKGHIAVYVG+++RKRFVVPI+YL +PSF  
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSS 98
          LLN +EEEFGF HP GGLTIPCRED FINLT+RL +S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

The following BLAST results are available for this feature:

BLAST of CmoCh02G003440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU22_ARATH	2.0e-24	59.77	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU24_ARATH	2.0e-24	59.77	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	3.5e-24	59.77	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU19_ARATH	3.5e-24	59.77	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU21_ARATH	4.6e-24	59.77	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of CmoCh02G003440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM71_CUCSA	1.8e-43	88.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	2.9e-33	68.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LM74_CUCSA	6.4e-33	71.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A061DZI1_THECC	1.1e-32	68.75	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 ...	[more]
A0A0A0LPJ1_CUCSA	4.1e-32	70.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]

BLAST of CmoCh02G003440 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	2.3e-26	55.10	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	6.8e-26	54.64	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.2e-25	59.77	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	1.2e-25	59.77	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	2.0e-25	59.77	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh02G003440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458562\|ref\|XP_004147016.1\|	2.6e-43	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115600\|ref\|XP_008457637.1\|	7.5e-43	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669614\|ref\|XP_011649278.1\|	8.3e-34	72.16	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	4.1e-33	68.04	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669611\|ref\|XP_011649277.1\|	9.2e-33	71.13	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003440.1	CmoCh02G003440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..93 score: 6.9
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.6
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G003440	MELO3C020763.2	Melon (DHL92) v3.6.1	cmomedB606

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003440	Cucumber (Gy14) v2	cgybcmoB220
CmoCh02G003440	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003440	Silver-seed gourd	carcmoB0436
CmoCh02G003440	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G003440	Watermelon (97103) v2	cmowmbB587
CmoCh02G003440	Wax gourd	cmowgoB0736
CmoCh02G003440	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003440	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G003440	Cucurbita moschata (Rifu)	cmocmoB416
CmoCh02G003440	Cucumber (Gy14) v1	cgycmoB0483
CmoCh02G003440	Cucumber (Gy14) v1	cgycmoB1053
CmoCh02G003440	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003440	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G003440	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003440	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003440	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003440	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003440	Melon (DHL92) v3.5.1	cmomeB527
CmoCh02G003440	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003440	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003440	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003440	Watermelon (97103) v1	cmowmB580
CmoCh02G003440	Watermelon (97103) v1	cmowmB603
CmoCh02G003440	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003440	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G003440	Bottle gourd (USVL1VR-Ls)	cmolsiB533