CmoCh02G003240 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transcription factor protein
Location	Cmo_Chr02 : 1676112 .. 1678939 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAATCCGCCATTTCAAATTCCTTTTGTTTTTCCGATGTATCGATCACTCCATTGAGCACGGCTAGGAACCACGACCTCCACATATGATATTGTCGGTTGGATGAAGAAGAAAAGTCCCACGTCGACTAGTTTAGGGAATAGTCTAGGGAATGATCTTGAGTTTATAAGTGAGGAATACTAACTTCATTGGTACGAGGCCTTGGGGAAGCCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCACGGTGGAGATCCGTGATTCCTAACATGGTATCATACCATTGTGGAAAGCCATTGTACTTTGTTCGAGGGGAGATGTTGGATGAAAAAAAAAAGTCCCACGTTGGCTAATTTAGGGAATGATGATGGGTTTATAAGTGGCTAATACGGGACTTCTCTCCCAACCATCCTCCCCTCGAACAAAGCACACCATAAGAGCCTCTTTTGAGGCGTATATAGCCGTCGAACAACCTCCCCTTAATCGAGACTTGATTCCTTCTCTAGAGCCCTCGAACAAATACACCATTTGTTCGACACTTGTGTCACCTTTAATAGAAGAATCGCGTGAGGTGATATAGATTTACTTTTATGTGCATACTAACAAGACTAGATGTGAGATTCCACGTCCGGAAAACGAAACATTTCTTATAAGAGTGTGGAAACCTCTCTCTATCAGACACATTTTAAAACTGTGAGGTTGACAATGATACGTAACGAGCCAAAGCGGACAATATATGCTAGTGGTGGGTTGGGCTGATACAATGGTATTAGAGCCATACACTGAGCAGTGTGCCAACCAGGATGCTGGGCCCCCAACGGGGTGGATTGTGAGATCTTACAACGGTTGAAGAGGAGAACGAAACATTTCTTATAAATGTTTGGAAACCTCTCCCTAAGAAACGCGTTTTAAAACCGTGAGGCTGACAATGATACGTAAGGGCCCAAAGTGGACATTACATGCTAGCGGTGGGCTTGGGCTGTTACAAATCGTATCAGAGCCAGACATCGAACATAGTGCCAGCGAGAATGTTGGGCCTCCATGCAGGGTGGATTATGAGATCCCTCATCGGTTAGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACTGACATGTTTTAAAACCGTGAAGCTAACGACAATACGTAACGGACCAAAACGAACAATATCTGATAGCGATGAGCTTGGACTGTTACAAATGATATCAGAGCCAGACACCGAGCGGTGTGCCATCCAGGACACTGGGCCTCTAAGGGGGGCAGATTGTGAGATCCCACGTTGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAGATGCATTTTAAAACTGTGAGGCTGACAACAATATGTAACTGTCCAAAGCGGACAATATCTGTTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGCCAGACACGGAGCGATATGCCAGCAAGGATGCTGTCCTCCAAGAGGGGTGGATTGTGATATCCCACATCAGTTGGAGAGGAGAACAAAACATTCCTTATAAAGGTATGGAAACCTCTCTAGAACATACGTGTTTTAAAACTGTGAGGCTGACAGTAGTACGTAATAGGCCAAAACGGACAATATGTGCTAGCGACGATTATATTACTCCAAGAAGTTAATATTAGTTCATCATGCACTTTGGTTCACTTGCAGCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCTCAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACCTCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAGTCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAGGAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGATATATGTGGAAACACATAAAAGTTCAGATTCGCCCCAGATGGTATGATATTGTTCGCTTTGAGTATAAGCTCTCGTGGTTTTACTTTTAGTTTTCCTAAAAGGTCTCGTACCAATAGAGAAGTATTTTCTTACTTACTTACAAACTCATGATCAACCCCTTAATTAGCTGATGTCGTTGTTGATGTATGATAGATGATATTTGGTGTCAGAAGGAAATGACTCTGATATTATGTAGAGGTGAATGGATACATGCACGATATCACGAGGGATTATGTTCAAAATTTTGGAATCACGGGACGAGAGTTGTCGGTCTCGAGCTTGGTCGAGGGGGTGAGGCCATTAATGCTGCAGCTATCAAGAAGTTTGAAGGTCTTGAATGAAAGGTGGAAAGGCATTCAAATCAAGAGTGCCCAATACCAGATATATTTCAATTGGTTCACGGGACATAGAGAGTTGTGGAGCCCTCTATGTATGGCTTGAAATCTTCTTGGTCTTTATCTAGCAGCGTTGTGTAACGAAGATTTAGAGGAGC

mRNA sequence

ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAATCCGCCATTTCAAATTCCTTTTGTTTTTCCGATCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCTCAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACCTCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAGTCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAGGAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGATATATGTGGAAACACATAAAAGTTCAGATTCGCCCCAGATGGTATGATATTGTTCGCTTTGAGTATAAGCTCTCGTGGTTTTACTTTTAGTTTTCCTAAAAGGTCTCGTACCAATAGAGAAGTATTTTCTTACTTACTTACAAACTCATGATCAACCCCTTAATTAGCTGATGTCGTTGTTGATGTATGATAGATGATATTTGGTGTCAGAAGGAAATGACTCTGATATTATGTAGAGGTGAATGGATACATGCACGATATCACGAGGGATTATGTTCAAAATTTTGGAATCACGGGACGAGAGTTGTCGGTCTCGAGCTTGGTCGAGGGGGTGAGGCCATTAATGCTGCAGCTATCAAGAAGTTTGAAGGTCTTGAATGAAAGGTGGAAAGGCATTCAAATCAAGAGTGCCCAATACCAGATATATTTCAATTGGTTCACGGGACATAGAGAGTTGTGGAGCCCTCTATGTATGGCTTGAAATCTTCTTGGTCTTTATCTAGCAGCGTTGTGTAACGAAGATTTAGAGGAGC

Coding sequence (CDS)

ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAATCCGCCATTTCAAATTCCTTTTGTTTTTCCGATCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCTCAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACCTCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAGTCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAGGAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGA

Homology

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BLAST of CmoCh02G003240 vs. Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.9e-21
Identity = 75/190 (39.47%), Postives = 106/190 (55.79%), Query Frame = 1


Query: 18  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLM 77
           EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL 
Sbjct: 107 ELTSEVNKLKSEYTALTDES-------RELTQEKNDLREEKTSLKSDIENLNLQYQQRLR 166

Query: 78  ATN--------SIVMAPAP-FPFPMP--MPPGPFPLHPTSQPYMFFGNQNPGVIANPCSP 137
           + +        +++MAP P FP+PMP  MPPG  P+HP+   Y +FGNQNP +I  PC  
Sbjct: 167 SMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPT 226

Query: 138 FVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSR 197
           ++ Y+ PN++ EQQS       VH   +  + S +     +  S  E  E S+    ++ 
Sbjct: 227 YMPYMPPNTVVEQQS-------VHIPQNPGNRSREPRAKVSRESRSEKAEDSN---EVAT 279

[Close]

BLAST of CmoCh02G003240 vs. TrEMBL
Match: A0A0A0LPK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263910 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.8e-38
Identity = 109/208 (52.40%), Postives = 130/208 (62.50%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 122 ELAQEKSDLREEKALLKSDIENLNTQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQMP 181

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP+PLHP+ QP+ FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 182 PGPYPLHPSLQPFTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQSDNRSR 241

Query: 166 SFSNDTNRNENN-PSEVE-----------LE----------------------------- 204
           + S    R++++  S++E           LE                             
Sbjct: 242 NLSEQNTRSKSSIESKIEKSEDSNEVATCLELKTPGSSTDQDTSYEQTNGKNRKESNLSV 301

[Close]

BLAST of CmoCh02G003240 vs. TrEMBL
Match: M5VL49_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008347mg PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.6e-30
Identity = 93/208 (44.71%), Postives = 116/208 (55.77%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPA--PFPFPMPMP 105
           +L  EKNDLREEKASLKSDIENLN+QYQQRL A        +S+VMAP   P+P PMPMP
Sbjct: 126 ELTHEKNDLREEKASLKSDIENLNAQYQQRLRAMFPWGAMDHSVVMAPPSYPYPMPMPMP 185

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP P+HP  QPY +F NQNPGVI NPCS FV Y+ PN++ EQQS++   P VHP +   
Sbjct: 186 PGPIPMHPHMQPYHYFPNQNPGVIPNPCSTFVPYVTPNTLVEQQSTQYVSPVVHPGSRSH 245

Query: 166 SFSNDTNRNE--------------NNPSEVEL---------------------------- 202
                 +RN+              +  +E+EL                            
Sbjct: 246 VSGKQDSRNKLSGESKIDRSEDSNDVTTELELKTPGSMTDQDLSSVRRKSQKSARKEIKV 305

[Close]

BLAST of CmoCh02G003240 vs. TrEMBL
Match: A0A067K5Q2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19590 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 81/161 (50.31%), Postives = 109/161 (67.70%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +L QEKNDLREEKASLKSDIENLN QYQQRL +T       +S+VMAP  +P+PMP+  P
Sbjct: 111 ELTQEKNDLREEKASLKSDIENLNIQYQQRLRSTYPWVAMDHSVVMAPTSYPYPMPVTIP 170

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP PLHP+ QPY FFGNQNP VI NPCS FV Y+ PN++ +QQS++ A  F  P     
Sbjct: 171 PGPIPLHPSMQPYPFFGNQNPAVIHNPCSTFVPYVTPNTLVDQQSTQRASSFAQP----- 230

Query: 166 SFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTL 198
             ++ ++ +    S+++L    S E  + +SL++N  ++ L
Sbjct: 231 --ASGSHVSGKQDSKIKL----SGESKVGKSLDSNDVTTEL 260

[Close]

BLAST of CmoCh02G003240 vs. TrEMBL
Match: W9QSX0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024952 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-28
Identity = 88/207 (42.51%), Postives = 112/207 (54.11%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPA--PFPFPMPMP 105
           +L QEKNDLREEK SLKSDIENLN QYQQR+          +S++MA    P+P PMPMP
Sbjct: 106 ELTQEKNDLREEKGSLKSDIENLNVQYQQRVRTMFPWTAMDHSVIMATPSYPYPVPMPMP 165

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNH-D 165
           PGP P+HP  QPY F+GN NPGVI NPCS FV YI P+++ EQQS +   P +HP N  D
Sbjct: 166 PGPIPMHPHMQPYPFYGNHNPGVIPNPCSTFVPYITPSTLVEQQSQQYVSPVMHPGNQSD 225

Query: 166 SSFSNDTNRNENNPSEVE------------------------------------------ 201
            S   D+    +  S++E                                          
Sbjct: 226 VSGKQDSRNKSSGESKIERSEDSNDVATNLELKTPGSATDQDLSSGQGKSPRSVRKENNV 285

[Close]

BLAST of CmoCh02G003240 vs. TrEMBL
Match: A0A067D7R4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022288mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-27
Identity = 89/208 (42.79%), Postives = 111/208 (53.37%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPA--PFPFPMPMP 105
           +L QEKNDLREEK SL+S+IENLN QYQQR+ A        +S++MAP   P+P PMPMP
Sbjct: 87  ELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPWAAMDHSVMMAPPSYPYPVPMPMP 146

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNH-D 165
           PG  P+HP  QPY  FGNQNPGVI NPCS FV Y+APN++ EQQS++ A     PS    
Sbjct: 147 PGAIPMHPPMQPYPMFGNQNPGVIPNPCSTFVPYMAPNTLVEQQSAQYASAVAQPSGRSQ 206

Query: 166 SSFSNDTNRNENNPSEVELEE--------------------------------------- 202
            S   D+    +  S++E  E                                       
Sbjct: 207 GSAKEDSGNKSSGESKIEKNEDSNDVTTDLELKTPGSTTDQDLPSGQRKSKKSLRKENSF 266

[Close]

BLAST of CmoCh02G003240 vs. TAIR10
Match: AT3G19860.2 (AT3G19860.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 5.6e-22
Identity = 75/190 (39.47%), Postives = 106/190 (55.79%), Query Frame = 1


Query: 18  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLM 77
           EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL 
Sbjct: 107 ELTSEVNKLKSEYTALTDES-------RELTQEKNDLREEKTSLKSDIENLNLQYQQRLR 166

Query: 78  ATN--------SIVMAPAP-FPFPMP--MPPGPFPLHPTSQPYMFFGNQNPGVIANPCSP 137
           + +        +++MAP P FP+PMP  MPPG  P+HP+   Y +FGNQNP +I  PC  
Sbjct: 167 SMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPT 226

Query: 138 FVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSR 197
           ++ Y+ PN++ EQQS       VH   +  + S +     +  S  E  E S+    ++ 
Sbjct: 227 YMPYMPPNTVVEQQS-------VHIPQNPGNRSREPRAKVSRESRSEKAEDSN---EVAT 279

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: gi|659115622|ref|XP_008457648.1| (PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38
Identity = 109/208 (52.40%), Postives = 129/208 (62.02%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 120 ELAQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIP 179

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 180 PGPYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSR 239

Query: 166 SFS-NDTNRNENNPSEVE----------------------------------------LE 204
           + S  +T    ++ S++E                                         E
Sbjct: 240 NLSEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLSE 299

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: gi|659115624|ref|XP_008457649.1| (PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38
Identity = 109/208 (52.40%), Postives = 129/208 (62.02%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 74  ELAQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIP 133

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 134 PGPYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSR 193

Query: 166 SFS-NDTNRNENNPSEVE----------------------------------------LE 204
           + S  +T    ++ S++E                                         E
Sbjct: 194 NLSEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLSE 253

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: gi|449458566|ref|XP_004147018.1| (PREDICTED: transcription factor bHLH121 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 4.0e-38
Identity = 109/208 (52.40%), Postives = 130/208 (62.50%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  P
Sbjct: 122 ELAQEKSDLREEKALLKSDIENLNTQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQMP 181

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP+PLHP+ QP+ FFGN +P VIANPCS FV YI PNS+ EQQSS+NAPPF+   N   
Sbjct: 182 PGPYPLHPSLQPFTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQSDNRSR 241

Query: 166 SFSNDTNRNENN-PSEVE-----------LE----------------------------- 204
           + S    R++++  S++E           LE                             
Sbjct: 242 NLSEQNTRSKSSIESKIEKSEDSNEVATCLELKTPGSSTDQDTSYEQTNGKNRKESNLSV 301

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: gi|595793257|ref|XP_007200377.1| (hypothetical protein PRUPE_ppa008347mg [Prunus persica])

HSP 1 Score: 139.8 bits (351), Expect = 5.2e-30
Identity = 93/208 (44.71%), Postives = 116/208 (55.77%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPA--PFPFPMPMP 105
           +L  EKNDLREEKASLKSDIENLN+QYQQRL A        +S+VMAP   P+P PMPMP
Sbjct: 126 ELTHEKNDLREEKASLKSDIENLNAQYQQRLRAMFPWGAMDHSVVMAPPSYPYPMPMPMP 185

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP P+HP  QPY +F NQNPGVI NPCS FV Y+ PN++ EQQS++   P VHP +   
Sbjct: 186 PGPIPMHPHMQPYHYFPNQNPGVIPNPCSTFVPYVTPNTLVEQQSTQYVSPVVHPGSRSH 245

Query: 166 SFSNDTNRNE--------------NNPSEVEL---------------------------- 202
                 +RN+              +  +E+EL                            
Sbjct: 246 VSGKQDSRNKLSGESKIDRSEDSNDVTTELELKTPGSMTDQDLSSVRRKSQKSARKEIKV 305

[Close]

BLAST of CmoCh02G003240 vs. NCBI nr
Match: gi|643715644|gb|KDP27585.1| (hypothetical protein JCGZ_19590 [Jatropha curcas])

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-29
Identity = 81/161 (50.31%), Postives = 109/161 (67.70%), Query Frame = 1


Query: 46  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--P 105
           +L QEKNDLREEKASLKSDIENLN QYQQRL +T       +S+VMAP  +P+PMP+  P
Sbjct: 111 ELTQEKNDLREEKASLKSDIENLNIQYQQRLRSTYPWVAMDHSVVMAPTSYPYPMPVTIP 170

Query: 106 PGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDS 165
           PGP PLHP+ QPY FFGNQNP VI NPCS FV Y+ PN++ +QQS++ A  F  P     
Sbjct: 171 PGPIPLHPSMQPYPFFGNQNPAVIHNPCSTFVPYVTPNTLVDQQSTQRASSFAQP----- 230

Query: 166 SFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTL 198
             ++ ++ +    S+++L    S E  + +SL++N  ++ L
Sbjct: 231 --ASGSHVSGKQDSKIKL----SGESKVGKSLDSNDVTTEL 260

The following BLAST results are available for this feature:

BLAST of CmoCh02G003240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH121_ARATH	9.9e-21	39.47	Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1	[more]

BLAST of CmoCh02G003240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPK4_CUCSA	2.8e-38	52.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263910 PE=4 SV=1	[more]
M5VL49_PRUPE	3.6e-30	44.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008347mg PE=4 SV=1	[more]
A0A067K5Q2_JATCU	1.1e-29	50.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19590 PE=4 SV=1	[more]
W9QSX0_9ROSA	2.0e-28	42.51	Uncharacterized protein OS=Morus notabilis GN=L484_024952 PE=4 SV=1	[more]
A0A067D7R4_CITSI	2.2e-27	42.79	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022288mg PE=4 SV=1	[more]

BLAST of CmoCh02G003240 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19860.2	5.6e-22	39.47	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmoCh02G003240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115622\|ref\|XP_008457648.1\|	1.0e-38	52.40	PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo]	[more]
gi\|659115624\|ref\|XP_008457649.1\|	1.0e-38	52.40	PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo]	[more]
gi\|449458566\|ref\|XP_004147018.1\|	4.0e-38	52.40	PREDICTED: transcription factor bHLH121 [Cucumis sativus]	[more]
gi\|595793257\|ref\|XP_007200377.1\|	5.2e-30	44.71	hypothetical protein PRUPE_ppa008347mg [Prunus persica]	[more]
gi\|643715644\|gb\|KDP27585.1\|	1.5e-29	50.31	hypothetical protein JCGZ_19590 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003240.1	CmoCh02G003240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 44..71 scor
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 46..136 score: 2.9
None	No IPR available	PANTHER	PTHR23042:SF70	TRANSCRIPTION FACTOR BHLH121	coord: 46..136 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G003240	Cucsa.169240	Cucumber (Gy14) v1	cgycmoB0483
CmoCh02G003240	CmaCh02G003290	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G003240	Cla001663	Watermelon (97103) v1	cmowmB584
CmoCh02G003240	Csa2G263910	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003240	MELO3C020781	Melon (DHL92) v3.5.1	cmomeB527
CmoCh02G003240	ClCG02G011390	Watermelon (Charleston Gray)	cmowcgB536
CmoCh02G003240	CSPI02G13140	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003240	Lsi10G004630	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G003240	Cp4.1LG05g13170	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G003240	MELO3C020781.2	Melon (DHL92) v3.6.1	cmomedB606
CmoCh02G003240	CsaV3_2G015700	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G003240	Cla97C02G037090	Watermelon (97103) v2	cmowmbB598
CmoCh02G003240	Bhi10G001506	Wax gourd	cmowgoB0736
CmoCh02G003240	CsGy2G013090	Cucumber (Gy14) v2	cgybcmoB220

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003240	Watermelon (97103) v2	cmowmbB587
CmoCh02G003240	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003240	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G003240	Cucumber (Gy14) v1	cgycmoB1053
CmoCh02G003240	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003240	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003240	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003240	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003240	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003240	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003240	Watermelon (Charleston Gray)	cmowcgB546
CmoCh02G003240	Watermelon (97103) v1	cmowmB597
CmoCh02G003240	Watermelon (97103) v1	cmowmB580
CmoCh02G003240	Watermelon (97103) v1	cmowmB603
CmoCh02G003240	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003240	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003240	Silver-seed gourd	carcmoB0436
CmoCh02G003240	Silver-seed gourd	carcmoB0475
CmoCh02G003240	Silver-seed gourd	carcmoB1156